Rmu_sc0000110.1_g000026

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000110.1
OG0000214
Physical Location & Seq
Forward (+)
130779 .. 134146
3368 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000110.1_g000026.1.cds

Sequence Viewer

Length: 2334 bp
atgcgccccttcgataccgacattagtggccctttctggattcttgccttttggctgcagatttatttccctcgcttccgtcgcaatgatattccaaaggaacctccagtcgattcccttttggggaactggttttgccgcaatgtacggtatcaagctcctccctactccgagtgttttatttacttgtacttgctgggagagatgccggacccaaaaatagtcatttctaggcgtttccctcctccctttgacgatggctttctacccaatggacgggatcatagagaaagagccctcctggcctttcgtcgcgccatctcctgcttggatattcgtcttgccaccgactgcgtaagttatgagctctacgcccctaaccactttgctcgccaatttgggttggcccagttagtaccctggcctctggttgattctgccaattactacacctcctggcggagattagccccgcctgagtctgccccctttcagagtcagtttactttgatagtgattcccccttgggtcagagcgctataccccctcaacgatgtcgatgatgactatgctgattggtggaaagaagtgtcagtgaactgttgggacctgccacatgacgaactcttcgtcctgatctttcgtggcatgagtagccctggtccggaggaccgcgagattcttgagcgcttctccaaacctgcagaacaacccctgcgacctattctaccttctcgctcattgcatccagggatacaaatccacgagcctagggcaacacaaactaaccggagcaggacagcctctgttcaggccgggaaacaaaaggcaatagcagaggagacttctgagggagagtcttcgcatgacgaagatcctgctgaggccactgctgtatttgcttgcaaacgcgatggagctcaattcgtcaacgagaattttgaagatgatgaacctctgggaatgcgactggtccgtcaaaagaccactgatccctctcgcctgagcgaggctggaccctcagccactgcagaagagccaattatctcgctagttcaagcatcaactaaccctgtggcacctctcccatctcccactacagagcatctgcaaggtcctaccattctaataacgatctctgatgacgactcctcagaggatgaaagcgtggaaagccactctgagacttctgcagcttatgaggaactgatgacgacagagattctcgcggcactagaggttcaagaggtgaatgaggtggggcctcttcctcttggtgaccacgtaccagatatcgacccgacagctcgagagtttccagattcccctgaggctgaagggacagaccaacctgttgaagatgaagaaactgaggaagttgtccacccttttgcattggtggttcgtgatcctgtggcgcctccgccgcctcctcctcctaccagattcgagagattgatgagggtgttagaggtaactcctccttctgttgtggatgaggctaagatggtggtttgcaaacatctgggtcctcaggtattggagactgacattctcccgcgagtcttagaagccctaaggtatctttgccaggagaaggtattgaccctgcagcaatttagtgctattaatgatctgttgaatgaacttgatatggcccgccgacgtcaatcggccgcgaacacccaggctcgggatgctcaagagactttgaatagtctttcccaagaaatggacatccctcgcggaattttaaatgagcgagccatccgcctgcgggaactacaaatccaaaggtccgacttcaaacttcggctcgaggatctccaagcccgtttagcctttgttgagaatgcgattgttgcagaagaagctcaactcgatgaacctttggctgcttctgaagaaatgggccgcaacctggcccatatcagagatcgggccactcaggccaaagctggtgctattgaggcgaaacgccgcgtggaggaaatttgtttgaaattgagctttgcaggccccctcataaaccggatcccccacctggagcaaatcggggaagggagggaagctaaattgaggttcgtctttcctcctctgtttccttccttctggacccggcccgtgttatgccctccagatggaaggggctttggaatgggttcaagctacagaatggctgttcctgtacttcacgtccagctaatggtggttaccaaggctagagggggtgcagagactaaagctgatattcggttccttcactctctgcccctccaggagataatggcgcggctcaacccggcgttgaattccatagctgcttccaattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

777

Amino Acids

87.47

Weight (kDa)

4.9

Isoelectric Point (pI)

57.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000214)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0079611
rosa_multiflora Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha Rh3DG208400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 975
AatII GACGTC 1 cut(s) 1669
Acc36I ACCTGC 2 cut(s) 618, 709
AccB1I GGYRCC 2 cut(s) 1078, 1417
AccB7I CCANNNNNTGG 2 cut(s) 1732, 2206
AccII CGCG 9 cut(s) 315, 675, 912, 1229, 1561, 1679, 1746, 1983, 2293
AccIII TCCGGA 1 cut(s) 664
AclWI GGATC 7 cut(s) 288, 869, 986, 1403, 1830, 2029, 2042
AcoI YGGCCR 1 cut(s) 1674
AcsI RAATTY 4 cut(s) 937, 1749, 1992, 2311
AcuI CTGAAG 2 cut(s) 1356, 1923
AcyI GRCGYC 2 cut(s) 1418, 1666
AfaI GTAC 5 cut(s) 147, 191, 417, 1287, 2190
AfeI AGCGCT 2 cut(s) 537, 689
AjiI CACGTC 1 cut(s) 2197
AloI GAACNNNNNNTCC 4 cut(s) 615, 647, 1773, 1805
Alw21I GWGCWC 2 cut(s) 369, 922
Alw26I GTCTC 5 cut(s) 836, 1178, 1538, 1700, 2231
AlwI GGATC 7 cut(s) 288, 869, 986, 1403, 1830, 2029, 2042
AlwNI CAGNNNCTG 2 cut(s) 806, 1028
Ama87I CYCGRG 3 cut(s) 1308, 1692, 1817
Aor13HI TCCGGA 1 cut(s) 664
Aor51HI AGCGCT 2 cut(s) 537, 689
ApeKI GCWGC 5 cut(s) 55, 1193, 1612, 1895, 2321
ApoI RAATTY 4 cut(s) 937, 1749, 1992, 2311
ArsI GACNNNNNNTTYG 4 cut(s) 611, 615, 643, 647
AseI ATTAAT 1 cut(s) 1629
Asp700I GAANNNNTTC 1 cut(s) 2161
AspA2I CCTAGG 1 cut(s) 770
AspLEI GCGC 6 cut(s) 6, 317, 538, 690, 1420, 2293
AsuC2I CCSGG 3 cut(s) 817, 2119, 2303
AsuHPI GGTGA 2 cut(s) 1261, 1289
AvaI CYCGRG 3 cut(s) 1308, 1692, 1817
AvrII CCTAGG 1 cut(s) 770
AxyI CCTNAGG 3 cut(s) 1329, 1533, 1577
BamHI GGATCC 1 cut(s) 2034
BanI GGYRCC 2 cut(s) 1078, 1417
BanII GRGCYC 3 cut(s) 298, 369, 922
BauI CACGAG 1 cut(s) 764
BbsI GAAGAC 1 cut(s) 852
Bbv12I GWGCWC 2 cut(s) 369, 922
BbvCI CCTCAGC 2 cut(s) 882, 1021
BbvI GCAGC 5 cut(s) 42, 1205, 1624, 1882, 2308
BccI CCATC 7 cut(s) 251, 326, 908, 1096, 1501, 1775, 2135
BcgI CGANNNNNNTGC 2 cut(s) 860, 894
BciVI GTATCC 1 cut(s) 747
BcnI CCSGG 3 cut(s) 817, 2119, 2303
BcoDI GTCTC 5 cut(s) 836, 1178, 1538, 1700, 2231
BfaI CTAG 5 cut(s) 231, 771, 1052, 1235, 2223
BfmI CTRYAG 7 cut(s) 56, 702, 1029, 1098, 1191, 1610, 2170
BfoI RGCGCY 3 cut(s) 539, 691, 1421
BfuAI ACCTGC 2 cut(s) 618, 709
BfuI GTATCC 1 cut(s) 747
BglI GCCNNNNNGGC 2 cut(s) 302, 1949
BlnI CCTAGG 1 cut(s) 770
BmeT110I CYCGRG 3 cut(s) 1308, 1692, 1817
BmgBI CACGTC 1 cut(s) 2197
BmrI ACTGGG 1 cut(s) 403
BmsI GCATC 5 cut(s) 195, 754, 1070, 1114, 1687
BmuI ACTGGG 1 cut(s) 403
BpiI GAAGAC 1 cut(s) 852
BplI GAGNNNNNCTC 2 cut(s) 677, 709
BpmI CTGGAG 4 cut(s) 90, 2066, 2121, 2261
Bpu10I CCTNAGC 3 cut(s) 882, 1004, 1021
BpuEI CTTGAG 2 cut(s) 704, 1686
BpuMI CCSGG 3 cut(s) 817, 2119, 2303
BsaAI YACGTR 1 cut(s) 1285
BsaBI GATNNNNATC 1 cut(s) 758
BsaHI GRCGYC 2 cut(s) 1418, 1666
BsaJI CCNNGG 7 cut(s) 419, 524, 658, 749, 770, 1686, 2217
BsaWI WCCGGW 3 cut(s) 664, 789, 2031
BsaXI ACNNNNNCTCC 2 cut(s) 437, 467
Bse1I ACTGG 4 cut(s) 107, 134, 409, 975
Bse21I CCTNAGG 3 cut(s) 1329, 1533, 1577
Bse3DI GCAATG 3 cut(s) 91, 148, 740
Bse8I GATNNNNATC 1 cut(s) 758
BseAI TCCGGA 1 cut(s) 664
BseDI CCNNGG 7 cut(s) 419, 524, 658, 749, 770, 1686, 2217
BseGI GGATG 6 cut(s) 745, 1165, 1501, 1702, 1737, 1767
BseJI GATNNNNATC 1 cut(s) 758
BseMI GCAATG 3 cut(s) 91, 148, 740
BseNI ACTGG 4 cut(s) 107, 134, 409, 975
BseRI GAGGAG 8 cut(s) 150, 234, 854, 1141, 1422, 1425, 1470, 2085
BseX3I CGGCCG 1 cut(s) 1674
BseXI GCAGC 5 cut(s) 42, 1205, 1624, 1882, 2308
BseYI CCCAGC 1 cut(s) 196
BsgI GTGCAG 1 cut(s) 2253
Bsh1236I CGCG 9 cut(s) 315, 675, 912, 1229, 1561, 1679, 1746, 1983, 2293
Bsh1285I CGRYCG 1 cut(s) 1677
BshNI GGYRCC 2 cut(s) 1078, 1417
BsiEI CGRYCG 1 cut(s) 1677
BsiHKAI GWGCWC 2 cut(s) 369, 922
BsiHKCI CYCGRG 3 cut(s) 1308, 1692, 1817
BsiSI CCGG 7 cut(s) 209, 665, 790, 816, 2032, 2119, 2303
BslFI GGGAC 2 cut(s) 620, 1354
BsmAI GTCTC 5 cut(s) 836, 1178, 1538, 1700, 2231
BsmFI GGGAC 2 cut(s) 620, 1354
BsmI GAATGC 2 cut(s) 969, 1858
BsoBI CYCGRG 3 cut(s) 1308, 1692, 1817
Bsp1286I GDGCHC 3 cut(s) 298, 369, 922
Bsp13I TCCGGA 1 cut(s) 664
BspEI TCCGGA 1 cut(s) 664
BspFNI CGCG 9 cut(s) 315, 675, 912, 1229, 1561, 1679, 1746, 1983, 2293
BspMAI CTGCAG 5 cut(s) 60, 706, 1033, 1195, 1614
BspMI ACCTGC 2 cut(s) 618, 709
BspPI GGATC 7 cut(s) 288, 869, 986, 1403, 1830, 2029, 2042
BspQI GCTCTTC 1 cut(s) 1029
BspT107I GGYRCC 2 cut(s) 1078, 1417
BsrDI GCAATG 3 cut(s) 91, 148, 740
BsrI ACTGG 4 cut(s) 107, 134, 409, 975
BssECI CCNNGG 7 cut(s) 419, 524, 658, 749, 770, 1686, 2217
BssNI GRCGYC 2 cut(s) 1418, 1666
BssSI CACGAG 1 cut(s) 764
BssT1I CCWWGG 3 cut(s) 524, 770, 2217
Bst2BI CACGAG 1 cut(s) 764
Bst4CI ACNGT 2 cut(s) 150, 602
Bst6I CTCTTC 3 cut(s) 632, 1029, 1272
BstACI GRCGYC 2 cut(s) 1418, 1666
BstBAI YACGTR 1 cut(s) 1285
BstC8I GCNNGC 6 cut(s) 391, 904, 1660, 1764, 1775, 2017
BstEII GGTNACC 2 cut(s) 1277, 2212
BstENI CCTNNNNNAGG 1 cut(s) 1007
BstF5I GGATG 6 cut(s) 745, 1165, 1501, 1702, 1737, 1767
BstFNI CGCG 9 cut(s) 315, 675, 912, 1229, 1561, 1679, 1746, 1983, 2293
BstH2I RGCGCY 3 cut(s) 539, 691, 1421
BstHHI GCGC 6 cut(s) 6, 317, 538, 690, 1420, 2293
BstMAI GTCTC 5 cut(s) 836, 1178, 1538, 1700, 2231
BstMCI CGRYCG 1 cut(s) 1677
BstPI GGTNACC 2 cut(s) 1277, 2212
BstSFI CTRYAG 7 cut(s) 56, 702, 1029, 1098, 1191, 1610, 2170
BstUI CGCG 9 cut(s) 315, 675, 912, 1229, 1561, 1679, 1746, 1983, 2293
BstV1I GCAGC 5 cut(s) 42, 1205, 1624, 1882, 2308
BstV2I GAAGAC 1 cut(s) 852
BstX2I RGATCY 3 cut(s) 874, 1822, 2034
BstYI RGATCY 3 cut(s) 874, 1822, 2034
BstZI CGGCCG 1 cut(s) 1674
Bsu36I CCTNAGG 3 cut(s) 1329, 1533, 1577
BsuI GTATCC 1 cut(s) 747
BtgZI GCGATG 1 cut(s) 927
BtrI CACGTC 1 cut(s) 2197
BtsCI GGATG 6 cut(s) 745, 1165, 1501, 1702, 1737, 1767
BtsI GCAGTG 2 cut(s) 888, 1026
BtsIMutI CAGTG 4 cut(s) 600, 888, 987, 1026
BveI ACCTGC 2 cut(s) 618, 709
Cac8I GCNNGC 6 cut(s) 391, 904, 1660, 1764, 1775, 2017
CaiI CAGNNNCTG 2 cut(s) 806, 1028
CfoI GCGC 6 cut(s) 6, 317, 538, 690, 1420, 2293
Csp6I GTAC 5 cut(s) 146, 190, 416, 1286, 2189
CviAII CATG 3 cut(s) 617, 649, 866
CviQI GTAC 5 cut(s) 146, 190, 416, 1286, 2189
DinI GGCGCC 1 cut(s) 1419
DraI TTTAAA 1 cut(s) 1755
DrdI GACNNNNNNGTC 1 cut(s) 975
DseDI GACNNNNNNGTC 1 cut(s) 975
EaeI YGGCCR 1 cut(s) 1674
EagI CGGCCG 1 cut(s) 1674
Eam1104I CTCTTC 3 cut(s) 632, 1029, 1272
EarI CTCTTC 3 cut(s) 632, 1029, 1272
EciI GGCGGA 3 cut(s) 475, 1413, 1760
Ecl136II GAGCTC 2 cut(s) 367, 920
EclXI CGGCCG 1 cut(s) 1674
Eco130I CCWWGG 3 cut(s) 524, 770, 2217
Eco24I GRGCYC 3 cut(s) 298, 369, 922
Eco32I GATATC 1 cut(s) 1294
Eco47III AGCGCT 2 cut(s) 537, 689
Eco52I CGGCCG 1 cut(s) 1674
Eco53kI GAGCTC 2 cut(s) 367, 920
Eco57I CTGAAG 2 cut(s) 1356, 1923
Eco81I CCTNAGG 3 cut(s) 1329, 1533, 1577
Eco88I CYCGRG 3 cut(s) 1308, 1692, 1817
Eco91I GGTNACC 2 cut(s) 1277, 2212
EcoICRI GAGCTC 2 cut(s) 367, 920
EcoNI CCTNNNNNAGG 1 cut(s) 1007
EcoO109I RGGNCCY 5 cut(s) 607, 1115, 1262, 1529, 2018
EcoO65I GGTNACC 2 cut(s) 1277, 2212
EcoRI GAATTC 1 cut(s) 2311
EcoRV GATATC 1 cut(s) 1294
EcoT14I CCWWGG 3 cut(s) 524, 770, 2217
EcoT38I GRGCYC 3 cut(s) 298, 369, 922
EgeI GGCGCC 1 cut(s) 1419
EheI GGCGCC 1 cut(s) 1419
ErhI CCWWGG 3 cut(s) 524, 770, 2217
FaeI CATG 3 cut(s) 620, 652, 869
FaqI GGGAC 2 cut(s) 620, 1354
FatI CATG 3 cut(s) 616, 648, 865
FauI CCCGC 4 cut(s) 480, 1566, 1667, 1770
FokI GGATG 6 cut(s) 732, 1172, 1508, 1709, 1724, 1754
FriOI GRGCYC 3 cut(s) 298, 369, 922
FspBI CTAG 5 cut(s) 231, 771, 1052, 1235, 2223
GlaI GCGC 6 cut(s) 5, 316, 537, 689, 1419, 2292
GsaI CCCAGC 1 cut(s) 200
GsuI CTGGAG 4 cut(s) 90, 2066, 2121, 2261
HaeII RGCGCY 3 cut(s) 539, 691, 1421
HapII CCGG 7 cut(s) 209, 665, 790, 816, 2032, 2119, 2303
HhaI GCGC 6 cut(s) 6, 317, 538, 690, 1420, 2293
Hin1I GRCGYC 2 cut(s) 1418, 1666
Hin1II CATG 3 cut(s) 620, 652, 869
Hin6I GCGC 6 cut(s) 4, 315, 536, 688, 1418, 2291
HinP1I GCGC 6 cut(s) 4, 315, 536, 688, 1418, 2291
HincII GTYRAC 1 cut(s) 931
HindII GTYRAC 1 cut(s) 931
HpaII CCGG 7 cut(s) 209, 665, 790, 816, 2032, 2119, 2303
HphI GGTGA 2 cut(s) 1261, 1289
Hpy166II GTNNAC 4 cut(s) 504, 598, 931, 1384
Hpy8I GTNNAC 4 cut(s) 504, 598, 931, 1384
Hpy99I CGWCG 3 cut(s) 84, 315, 1668
HpyCH4III ACNGT 2 cut(s) 150, 602
HpyCH4IV ACGT 3 cut(s) 1284, 1666, 2196
HpySE526I ACGT 3 cut(s) 1284, 1666, 2196
Hsp92I GRCGYC 2 cut(s) 1418, 1666
Hsp92II CATG 3 cut(s) 620, 652, 869
HspAI GCGC 6 cut(s) 4, 315, 536, 688, 1418, 2291
KasI GGCGCC 1 cut(s) 1417
Kpn2I TCCGGA 1 cut(s) 664
LguI GCTCTTC 1 cut(s) 1029
LmnI GCTCC 4 cut(s) 163, 792, 917, 2047
Lsp1109I GCAGC 5 cut(s) 42, 1205, 1624, 1882, 2308
LweI GCATC 5 cut(s) 195, 754, 1070, 1114, 1687
MaeI CTAG 5 cut(s) 231, 771, 1052, 1235, 2223
MaeII ACGT 3 cut(s) 1284, 1666, 2196
MaeIII GTNAC 3 cut(s) 1277, 1474, 2212
MfeI CAATTG 1 cut(s) 2329
MflI RGATCY 3 cut(s) 874, 1822, 2034
MhlI GDGCHC 3 cut(s) 298, 369, 922
Mly113I GGCGCC 1 cut(s) 1418
MlyI GAGTC 5 cut(s) 488, 505, 866, 1142, 1572
MmeI TCCRAC 1 cut(s) 1824
MroI TCCGGA 1 cut(s) 664
MroXI GAANNNNTTC 1 cut(s) 2161
MseI TTAA 2 cut(s) 1629, 1754
MspI CCGG 7 cut(s) 209, 665, 790, 816, 2032, 2119, 2303
MunI CAATTG 1 cut(s) 2329
Mva1269I GAATGC 2 cut(s) 969, 1858
MvnI CGCG 9 cut(s) 315, 675, 912, 1229, 1561, 1679, 1746, 1983, 2293
NarI GGCGCC 1 cut(s) 1418
NciI CCSGG 3 cut(s) 817, 2119, 2303
NlaIII CATG 3 cut(s) 620, 652, 869
NmuCI GTSAC 1 cut(s) 1277
PaeR7I CTCGAG 2 cut(s) 1308, 1817
PciSI GCTCTTC 1 cut(s) 1029
PcsI WCGNNNNNNNCGW 1 cut(s) 627
PctI GAATGC 2 cut(s) 969, 1858
PdmI GAANNNNTTC 1 cut(s) 2161
PfeI GAWTC 8 cut(s) 40, 113, 434, 517, 679, 1222, 1322, 1446
PflMI CCANNNNNTGG 2 cut(s) 1732, 2206
PfoI TCCNGGA 1 cut(s) 2277
PleI GAGTC 5 cut(s) 487, 504, 865, 1142, 1571
PluTI GGCGCC 1 cut(s) 1421
PpsI GAGTC 5 cut(s) 487, 504, 865, 1142, 1571
Ppu21I YACGTR 1 cut(s) 1285
PpuMI RGGWCCY 3 cut(s) 607, 1115, 1529
PshBI ATTAAT 1 cut(s) 1629
Psp124BI GAGCTC 2 cut(s) 369, 922
Psp5II RGGWCCY 3 cut(s) 607, 1115, 1529
PspEI GGTNACC 2 cut(s) 1277, 2212
PspFI CCCAGC 1 cut(s) 196
PspPPI RGGWCCY 3 cut(s) 607, 1115, 1529
PspXI VCTCGAGB 1 cut(s) 1817
PstI CTGCAG 5 cut(s) 60, 706, 1033, 1195, 1614
PstNI CAGNNNCTG 2 cut(s) 806, 1028
PsuI RGATCY 3 cut(s) 874, 1822, 2034
RsaI GTAC 5 cut(s) 147, 191, 417, 1287, 2190
RsaNI GTAC 5 cut(s) 146, 190, 416, 1286, 2189
SacI GAGCTC 2 cut(s) 369, 922
SapI GCTCTTC 1 cut(s) 1029
SaqAI TTAA 2 cut(s) 1629, 1754
SchI GAGTC 5 cut(s) 488, 505, 866, 1142, 1572
SduI GDGCHC 3 cut(s) 298, 369, 922
SfaNI GCATC 5 cut(s) 195, 754, 1070, 1114, 1687
SfcI CTRYAG 7 cut(s) 56, 702, 1029, 1098, 1191, 1610, 2170
SfiI GGCCNNNNNGGCC 1 cut(s) 1949
SfoI GGCGCC 1 cut(s) 1419
Sfr274I CTCGAG 2 cut(s) 1308, 1817
SlaI CTCGAG 2 cut(s) 1308, 1817
SmlI CTYRAG 4 cut(s) 683, 1308, 1701, 1817
SmoI CTYRAG 4 cut(s) 683, 1308, 1701, 1817
SspDI GGCGCC 1 cut(s) 1417
SspMI CTAG 5 cut(s) 231, 771, 1052, 1235, 2223
SstI GAGCTC 2 cut(s) 369, 922
StyI CCWWGG 3 cut(s) 524, 770, 2217
TaaI ACNGT 2 cut(s) 150, 602
TaiI ACGT 3 cut(s) 1287, 1669, 2199
TaqI TCGA 8 cut(s) 12, 111, 558, 1296, 1309, 1449, 1818, 1881
TatI WGTACW 2 cut(s) 189, 2188
TauI GCSGC 7 cut(s) 141, 1232, 1429, 1679, 1917, 1983, 2296
TfiI GAWTC 8 cut(s) 40, 113, 434, 517, 679, 1222, 1322, 1446
Tru1I TTAA 2 cut(s) 1629, 1754
Tru9I TTAA 2 cut(s) 1629, 1754
TscAI CASTG 4 cut(s) 600, 895, 994, 1033
TseFI GTSAC 1 cut(s) 1277
TseI GCWGC 5 cut(s) 55, 1193, 1612, 1895, 2321
Tsp45I GTSAC 1 cut(s) 1277
TspDTI ATGAA 5 cut(s) 966, 1176, 1377, 1659, 1899
TspGWI ACGGA 2 cut(s) 68, 965
TspRI CASTG 4 cut(s) 600, 895, 994, 1033
Van91I CCANNNNNTGG 2 cut(s) 1732, 2206
VspI ATTAAT 1 cut(s) 1629
XagI CCTNNNNNAGG 1 cut(s) 1007
XapI RAATTY 4 cut(s) 937, 1749, 1992, 2311
XcmI CCANNNNNNNNNTGG 1 cut(s) 325
XhoI CTCGAG 2 cut(s) 1308, 1817
XmaJI CCTAGG 1 cut(s) 770
XmnI GAANNNNTTC 1 cut(s) 2161
XspI CTAG 5 cut(s) 231, 771, 1052, 1235, 2223
ZraI GACGTC 1 cut(s) 1667
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.