Rmu_sc0000360.1_g000033

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000360.1
OG0000214
Physical Location & Seq
Forward (+)
127912 .. 130817
2906 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000360.1_g000033.1.cds

Sequence Viewer

Length: 2115 bp
atggcatccaagaaaccattcgttatcgatcaggcagatgaaatcattgagaaagccgcattcacctggcggactaacatgagtgttcaatgtagaagtcagaccggagaggagagaagtcgactgatgggctttggtggaggtgatagtcaagcgatcgattcccttctggggaactggctttgccgcaacgtaaggtatcgagctcctccctacttcgagtgttttatttacttgtacttgctgggagagatgccggacccaaaaatagtcctttctaggcgtttccctcctccccttgacaatggctttctgcccagtggacgggatcatagtgaaagagccttcttggccttttgtcacgccatctcttgcttggatattcatcttgccaccgaccgcgtaacttatgagctctatgcccctaatcactttgctcgccaatttgggttggcccagttggtaccctggcctctggttgattctgccaattactacacctcttggcggagattagccccacctggaacgctgtaccccctcaacgatgtcgactatgattatgctgattggtggaaagaaatgtccgtgaactgttgggacctgccacatgaaaaactcttcgtcctgatctttagtggcatgagtagtcctgatccggaggaccgcgagattcttgagcacttctccaaccctgcagcacaaccctcgcaacctattctaccttcttgttcatcgcgtccagggatacaaatccacgagcctagggcaacagcaatagcagaggagactcttgatggagagtcttctcatgatgaagatcccactgagaccactgctgtctttgcttgtaaacgcgatctatctcaatccgttgaagagagttttgaagatgacgagcctctgggaatgctattggtctgtcagaggaccactgatccctctcgcctgagcgaggctggatcctcagccgctacagaagagccaattttcccgctagttcaagcatcaactaaccccgtggcgcctcttccgtctcccacatctacagagcatctgcaaggtcctatcattctaataacgatctcagatgacgactcctcggagcatgaaagcttggaaagccactatgaggcttctaccgcttatgaggaactgatgatgacagagattcttgtggcactagaggtccaagaggtgaataaggtgaggcctcttcctcttggagaacacgtactagatactgacccgacaactcgagagttgccccaaagatggaaaatgatactgacggtggtggtgcccccccaagtctcgcgaataaatgagataaccgtcggagccaagggctctgtgcttgaatctgctccacttgcccatggtgagctgcgagttgagtttccagattctcctgcagctgaagggatagaccaacctgttgaagatgaagaaactgaggaagctgtccacccttttgcattggtggttcgtgatcctgtggcgcctccgcggcctcctcctcctaccagattcgagagattgatgagggtgttggaggtaactcctccttctgctatggatgaggctaagatggtgcttcacgaacatttgggtcttcaggtattgcagactgacatcttcccgcgagtcttggaatctgtaaggtatcttcgccaggagaaggctttgactccgtggcaatttagtgatatcgattctctgctgaaagaacttggtagggcccgccgacatcaatcggccgcgaacgcccaggcttacgacactcaagaggctttgaatagtgtatctctagaaatggacatctcccgcggtgttttaaacaagcgagccatctgcctgcgggaactacaaatccaaaggtccgacttcaaacttcggatcgaggacctccatgtcggtttagcctttgttgagaatgcaattgctgcagaagaagcccaactcgatgaacctttggcagcttttgaagaaatgggccgcaacctggctcatgtcagagaacgggccactcgggccgaagctggtgccattgcggcgaaactccacgtggaggaactttgtttgaaattgagctttgtggtccaatctctgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

704

Amino Acids

78.88

Weight (kDa)

4.77

Isoelectric Point (pI)

60.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000214)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0079611
rosa_multiflora Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha Rh3DG208400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1913
Acc36I ACCTGC 1 cut(s) 612
Acc65I GGTACC 1 cut(s) 463
AccB1I GGYRCC 5 cut(s) 463, 1024, 1300, 1501, 2045
AccI GTMKAC 2 cut(s) 121, 552
AccII CGCG 9 cut(s) 402, 669, 739, 858, 1318, 1510, 1645, 1763, 1830
AccIII TCCGGA 1 cut(s) 658
AclWI GGATC 8 cut(s) 336, 650, 815, 932, 957, 970, 1487, 1907
AcoI YGGCCR 1 cut(s) 1758
AcuI CTGAAG 2 cut(s) 1440, 1601
AcvI CACGTG 1 cut(s) 2068
AcyI GRCGYC 2 cut(s) 1025, 1502
AfaI GTAC 4 cut(s) 239, 465, 536, 1236
AfiI CCNNNNNNNGG 9 cut(s) 171, 324, 507, 955, 1132, 1275, 1681, 2005, 2071
AflIII ACRYGT 1 cut(s) 1231
AjnI CCWGG 7 cut(s) 65, 467, 523, 742, 1674, 1770, 2004
AjuI GAANNNNNNNTTGG 1 cut(s) 34
AloI GAACNNNNNNTCC 2 cut(s) 1857, 1889
AluBI AGCT 9 cut(s) 206, 415, 1116, 1387, 1418, 1463, 1982, 2042, 2094
AluI AGCT 9 cut(s) 206, 415, 1116, 1387, 1418, 1463, 1982, 2042, 2094
Alw21I GWGCWC 3 cut(s) 208, 417, 684
Alw26I GTCTC 4 cut(s) 782, 824, 1041, 1318
AlwI GGATC 8 cut(s) 336, 650, 815, 932, 957, 970, 1487, 1907
Ama87I CYCGRG 2 cut(s) 1257, 2031
Aor13HI TCCGGA 1 cut(s) 658
ApaI GGGCCC 1 cut(s) 1744
ApeKI GCWGC 5 cut(s) 698, 1387, 1415, 1946, 1979
Asp700I GAANNNNTTC 1 cut(s) 17
Asp718I GGTACC 1 cut(s) 463
AspA2I CCTAGG 1 cut(s) 764
AspLEI GCGC 2 cut(s) 1027, 1504
AsuHPI GGTGA 5 cut(s) 55, 155, 1210, 1219, 1394
AvaI CYCGRG 2 cut(s) 1257, 2031
AvaII GGWCC 9 cut(s) 259, 601, 664, 930, 1064, 1189, 1881, 1906, 2101
AvrII CCTAGG 1 cut(s) 764
BaeGI GKGCMC 2 cut(s) 1305, 1744
BamHI GGATCC 1 cut(s) 962
BanI GGYRCC 5 cut(s) 463, 1024, 1300, 1501, 2045
BanII GRGCYC 4 cut(s) 208, 417, 1352, 1744
BarI GAAGNNNNNNTAC 2 cut(s) 1653, 1685
BauI CACGAG 1 cut(s) 758
BbrPI CACGTG 1 cut(s) 2068
BbsI GAAGAC 2 cut(s) 798, 1607
Bbv12I GWGCWC 3 cut(s) 208, 417, 684
BbvCI CCTCAGC 1 cut(s) 967
BbvI GCAGC 5 cut(s) 710, 1374, 1427, 1933, 1991
BccI CCATC 6 cut(s) 121, 374, 791, 1269, 1585, 1859
BcgI CGANNNNNNTGC 6 cut(s) 690, 724, 1836, 1870, 2027, 2061
BciT130I CCWGG 7 cut(s) 67, 469, 525, 744, 1676, 1772, 2006
BciVI GTATCC 1 cut(s) 741
BcoDI GTCTC 4 cut(s) 782, 824, 1041, 1318
BfaI CTAG 6 cut(s) 279, 765, 998, 1184, 1238, 1811
BfmI CTRYAG 6 cut(s) 696, 975, 1047, 1413, 1947, 2111
BfoI RGCGCY 2 cut(s) 1028, 1505
BfuAI ACCTGC 1 cut(s) 612
BfuI GTATCC 1 cut(s) 741
BglI GCCNNNNNGGC 4 cut(s) 350, 1510, 2033, 2054
BlnI CCTAGG 1 cut(s) 764
Bme1390I CCNGG 7 cut(s) 67, 469, 525, 744, 1676, 1772, 2006
Bme18I GGWCC 9 cut(s) 259, 601, 664, 930, 1064, 1189, 1881, 1906, 2101
BmeT110I CYCGRG 2 cut(s) 1257, 2031
BmrFI CCNGG 7 cut(s) 67, 469, 525, 744, 1676, 1772, 2006
BmrI ACTGGG 2 cut(s) 312, 451
BmsI GCATC 4 cut(s) 14, 243, 1016, 1063
BmuI ACTGGG 2 cut(s) 312, 451
BpiI GAAGAC 2 cut(s) 798, 1607
BplI GAGNNNNNCTC 2 cut(s) 671, 703
Bpu10I CCTNAGC 2 cut(s) 950, 967
BpuEI CTTGAG 2 cut(s) 698, 1770
Bsa29I ATCGAT 3 cut(s) 27, 159, 1713
BsaAI YACGTR 2 cut(s) 1234, 2068
BsaBI GATNNNNATC 3 cut(s) 384, 752, 819
BsaHI GRCGYC 2 cut(s) 1025, 1502
BsaI GGTCTC 1 cut(s) 824
BsaWI WCCGGW 2 cut(s) 104, 658
BsaXI ACNNNNNCTCC 2 cut(s) 1218, 1248
Bsc4I CCNNNNNNNGG 9 cut(s) 171, 324, 507, 955, 1132, 1275, 1681, 2005, 2071
Bse1I ACTGG 3 cut(s) 182, 318, 457
Bse3DI GCAATG 1 cut(s) 2049
Bse8I GATNNNNATC 3 cut(s) 384, 752, 819
BseAI TCCGGA 1 cut(s) 658
BseBI CCWGG 7 cut(s) 67, 469, 525, 744, 1676, 1772, 2006
BseCI ATCGAT 3 cut(s) 27, 159, 1713
BseGI GGATG 2 cut(s) 5, 1585
BseJI GATNNNNATC 3 cut(s) 384, 752, 819
BseLI CCNNNNNNNGG 9 cut(s) 171, 324, 507, 955, 1132, 1275, 1681, 2005, 2071
BseMI GCAATG 1 cut(s) 2049
BseMII CTCAG 5 cut(s) 819, 941, 981, 1101, 1446
BseNI ACTGG 3 cut(s) 182, 318, 457
BseRI GAGGAG 8 cut(s) 125, 198, 282, 800, 1090, 1506, 1509, 1554
BseSI GKGCMC 2 cut(s) 1305, 1744
BseX3I CGGCCG 1 cut(s) 1758
BseXI GCAGC 5 cut(s) 710, 1374, 1427, 1933, 1991
BseYI CCCAGC 1 cut(s) 244
Bsh1236I CGCG 9 cut(s) 402, 669, 739, 858, 1318, 1510, 1645, 1763, 1830
Bsh1285I CGRYCG 3 cut(s) 159, 400, 1761
BshNI GGYRCC 5 cut(s) 463, 1024, 1300, 1501, 2045
BshVI ATCGAT 3 cut(s) 27, 159, 1713
BsiEI CGRYCG 3 cut(s) 159, 400, 1761
BsiHKAI GWGCWC 3 cut(s) 208, 417, 684
BsiHKCI CYCGRG 2 cut(s) 1257, 2031
BsiSI CCGG 3 cut(s) 105, 257, 659
BslFI GGGAC 1 cut(s) 614
BslI CCNNNNNNNGG 9 cut(s) 171, 324, 507, 955, 1132, 1275, 1681, 2005, 2071
BsmAI GTCTC 4 cut(s) 782, 824, 1041, 1318
BsmBI CGTCTC 1 cut(s) 1041
BsmFI GGGAC 1 cut(s) 614
BsmI GAATGC 3 cut(s) 59, 915, 1942
Bso31I GGTCTC 1 cut(s) 824
BsoBI CYCGRG 2 cut(s) 1257, 2031
Bsp120I GGGCCC 1 cut(s) 1740
Bsp1286I GDGCHC 6 cut(s) 208, 417, 684, 1305, 1352, 1744
Bsp13I TCCGGA 1 cut(s) 658
Bsp19I CCATGG 1 cut(s) 1378
Bsp68I TCGCGA 1 cut(s) 1318
BspCNI CTCAG 5 cut(s) 820, 942, 980, 1100, 1447
BspDI ATCGAT 3 cut(s) 27, 159, 1713
BspEI TCCGGA 1 cut(s) 658
BspFNI CGCG 9 cut(s) 402, 669, 739, 858, 1318, 1510, 1645, 1763, 1830
BspHI TCATGA 1 cut(s) 811
BspMAI CTGCAG 3 cut(s) 700, 1417, 1951
BspMI ACCTGC 1 cut(s) 612
BspPI GGATC 8 cut(s) 336, 650, 815, 932, 957, 970, 1487, 1907
BspQI GCTCTTC 1 cut(s) 975
BspT107I GGYRCC 5 cut(s) 463, 1024, 1300, 1501, 2045
BspTNI GGTCTC 1 cut(s) 824
BsrDI GCAATG 1 cut(s) 2049
BsrI ACTGG 3 cut(s) 182, 318, 457
BssNI GRCGYC 2 cut(s) 1025, 1502
BssSI CACGAG 1 cut(s) 758
BssT1I CCWWGG 3 cut(s) 764, 1344, 1378
Bst2BI CACGAG 1 cut(s) 758
Bst2UI CCWGG 7 cut(s) 67, 469, 525, 744, 1676, 1772, 2006
Bst4CI ACNGT 3 cut(s) 596, 1294, 1336
Bst6I CTCTTC 5 cut(s) 626, 873, 975, 1035, 1221
BstACI GRCGYC 2 cut(s) 1025, 1502
BstAPI GCANNNNNTGC 1 cut(s) 1946
BstBAI YACGTR 2 cut(s) 1234, 2068
BstC8I GCNNGC 4 cut(s) 439, 1744, 1848, 1859
BstDEI CTNAG 6 cut(s) 828, 950, 967, 1087, 1455, 1587
BstDSI CCRYGG 5 cut(s) 1020, 1378, 1508, 1694, 1828
BstENI CCTNNNNNAGG 1 cut(s) 953
BstF5I GGATG 2 cut(s) 5, 1585
BstFNI CGCG 9 cut(s) 402, 669, 739, 858, 1318, 1510, 1645, 1763, 1830
BstH2I RGCGCY 2 cut(s) 1028, 1505
BstHHI GCGC 2 cut(s) 1027, 1504
BstMAI GTCTC 4 cut(s) 782, 824, 1041, 1318
BstMCI CGRYCG 3 cut(s) 159, 400, 1761
BstNI CCWGG 7 cut(s) 67, 469, 525, 744, 1676, 1772, 2006
BstSCI CCNGG 7 cut(s) 65, 467, 523, 742, 1674, 1770, 2004
BstSFI CTRYAG 6 cut(s) 696, 975, 1047, 1413, 1947, 2111
BstSLI GKGCMC 2 cut(s) 1305, 1744
BstUI CGCG 9 cut(s) 402, 669, 739, 858, 1318, 1510, 1645, 1763, 1830
BstV1I GCAGC 5 cut(s) 710, 1374, 1427, 1933, 1991
BstV2I GAAGAC 2 cut(s) 798, 1607
BstX2I RGATCY 2 cut(s) 820, 962
BstYI RGATCY 2 cut(s) 820, 962
BstZI CGGCCG 1 cut(s) 1758
Bsu15I ATCGAT 3 cut(s) 27, 159, 1713
BsuI GTATCC 1 cut(s) 741
BsuTUI ATCGAT 3 cut(s) 27, 159, 1713
BtgI CCRYGG 5 cut(s) 1020, 1378, 1508, 1694, 1828
BtgZI GCGATG 1 cut(s) 720
BtsCI GGATG 2 cut(s) 5, 1585
BtsI GCAGTG 1 cut(s) 834
BtsIMutI CAGTG 4 cut(s) 325, 825, 834, 933
BtuMI TCGCGA 1 cut(s) 1318
BveI ACCTGC 1 cut(s) 612
Cac8I GCNNGC 4 cut(s) 439, 1744, 1848, 1859
CciI TCATGA 1 cut(s) 811
CfoI GCGC 2 cut(s) 1027, 1504
Cfr42I CCGCGG 2 cut(s) 1511, 1831
ClaI ATCGAT 3 cut(s) 27, 159, 1713
CseI GACGC 1 cut(s) 728
Csp6I GTAC 4 cut(s) 238, 464, 535, 1235
CviAII CATG 8 cut(s) 79, 611, 643, 812, 1109, 1379, 1913, 2012
CviQI GTAC 4 cut(s) 238, 464, 535, 1235
DdeI CTNAG 6 cut(s) 828, 950, 967, 1087, 1455, 1587
DinI GGCGCC 2 cut(s) 1026, 1503
DraI TTTAAA 1 cut(s) 1839
DrdI GACNNNNNNGTC 1 cut(s) 1913
DseDI GACNNNNNNGTC 1 cut(s) 1913
EaeI YGGCCR 1 cut(s) 1758
EagI CGGCCG 1 cut(s) 1758
Eam1104I CTCTTC 5 cut(s) 626, 873, 975, 1035, 1221
EarI CTCTTC 5 cut(s) 626, 873, 975, 1035, 1221
EciI GGCGGA 2 cut(s) 85, 523
Ecl136II GAGCTC 2 cut(s) 206, 415
EclXI CGGCCG 1 cut(s) 1758
Eco130I CCWWGG 3 cut(s) 764, 1344, 1378
Eco147I AGGCCT 1 cut(s) 1213
Eco24I GRGCYC 4 cut(s) 208, 417, 1352, 1744
Eco31I GGTCTC 1 cut(s) 824
Eco32I GATATC 1 cut(s) 1711
Eco47I GGWCC 9 cut(s) 259, 601, 664, 930, 1064, 1189, 1881, 1906, 2101
Eco52I CGGCCG 1 cut(s) 1758
Eco53kI GAGCTC 2 cut(s) 206, 415
Eco57I CTGAAG 2 cut(s) 1440, 1601
Eco72I CACGTG 1 cut(s) 2068
Eco88I CYCGRG 2 cut(s) 1257, 2031
EcoICRI GAGCTC 2 cut(s) 206, 415
EcoNI CCTNNNNNAGG 1 cut(s) 953
EcoO109I RGGNCCY 4 cut(s) 601, 1064, 1740, 1906
EcoRII CCWGG 7 cut(s) 65, 467, 523, 742, 1674, 1770, 2004
EcoRV GATATC 1 cut(s) 1711
EcoT14I CCWWGG 3 cut(s) 764, 1344, 1378
EcoT38I GRGCYC 4 cut(s) 208, 417, 1352, 1744
EgeI GGCGCC 2 cut(s) 1026, 1503
EheI GGCGCC 2 cut(s) 1026, 1503
ErhI CCWWGG 3 cut(s) 764, 1344, 1378
Esp3I CGTCTC 1 cut(s) 1041
FaeI CATG 8 cut(s) 82, 614, 646, 815, 1112, 1382, 1916, 2015
FaqI GGGAC 1 cut(s) 614
FatI CATG 8 cut(s) 78, 610, 642, 811, 1108, 1378, 1912, 2011
FauI CCCGC 5 cut(s) 1002, 1650, 1751, 1835, 1854
FblI GTMKAC 2 cut(s) 121, 552
FokI GGATG 1 cut(s) 1592
FriOI GRGCYC 4 cut(s) 208, 417, 1352, 1744
FspBI CTAG 6 cut(s) 279, 765, 998, 1184, 1238, 1811
GlaI GCGC 2 cut(s) 1026, 1503
GsaI CCCAGC 1 cut(s) 248
HaeII RGCGCY 2 cut(s) 1028, 1505
HapII CCGG 3 cut(s) 105, 257, 659
HgaI GACGC 1 cut(s) 728
HhaI GCGC 2 cut(s) 1027, 1504
Hin1I GRCGYC 2 cut(s) 1025, 1502
Hin1II CATG 8 cut(s) 82, 614, 646, 815, 1112, 1382, 1916, 2015
Hin6I GCGC 2 cut(s) 1025, 1502
HinP1I GCGC 2 cut(s) 1025, 1502
HincII GTYRAC 2 cut(s) 122, 553
HindII GTYRAC 2 cut(s) 122, 553
HindIII AAGCTT 1 cut(s) 1114
HpaII CCGG 3 cut(s) 105, 257, 659
HphI GGTGA 5 cut(s) 55, 155, 1210, 1219, 1394
Hpy166II GTNNAC 6 cut(s) 122, 323, 553, 592, 854, 1468
Hpy188I TCNGA 8 cut(s) 102, 927, 1090, 1105, 1340, 1885, 1899, 2018
Hpy8I GTNNAC 6 cut(s) 122, 323, 553, 592, 854, 1468
Hpy99I CGWCG 1 cut(s) 1340
HpyAV CCTTC 6 cut(s) 176, 355, 735, 1415, 1578, 1675
HpyCH4III ACNGT 3 cut(s) 596, 1294, 1336
HpyCH4IV ACGT 3 cut(s) 192, 1233, 2067
HpyCH4V TGCA 7 cut(s) 698, 1060, 1415, 1478, 1627, 1940, 1949
HpyF3I CTNAG 6 cut(s) 828, 950, 967, 1087, 1455, 1587
HpySE526I ACGT 3 cut(s) 192, 1233, 2067
Hsp92I GRCGYC 2 cut(s) 1025, 1502
Hsp92II CATG 8 cut(s) 82, 614, 646, 815, 1112, 1382, 1916, 2015
HspAI GCGC 2 cut(s) 1025, 1502
KasI GGCGCC 2 cut(s) 1024, 1501
Kpn2I TCCGGA 1 cut(s) 658
KpnI GGTACC 1 cut(s) 467
KspI CCGCGG 2 cut(s) 1511, 1831
LguI GCTCTTC 1 cut(s) 975
LmnI GCTCC 4 cut(s) 211, 1105, 1340, 1372
Lsp1109I GCAGC 5 cut(s) 710, 1374, 1427, 1933, 1991
LweI GCATC 4 cut(s) 14, 243, 1016, 1063
MaeI CTAG 6 cut(s) 279, 765, 998, 1184, 1238, 1811
MaeII ACGT 3 cut(s) 192, 1233, 2067
MaeIII GTNAC 3 cut(s) 359, 403, 1558
MfeI CAATTG 1 cut(s) 1941
MflI RGATCY 2 cut(s) 820, 962
MhlI GDGCHC 6 cut(s) 208, 417, 684, 1305, 1352, 1744
MluCI AATT 6 cut(s) 443, 490, 987, 1700, 1941, 2087
Mly113I GGCGCC 2 cut(s) 1025, 1502
MlyI GAGTC 5 cut(s) 784, 812, 1091, 1656, 1684
MmeI TCCRAC 4 cut(s) 714, 1318, 1533, 1908
MroI TCCGGA 1 cut(s) 658
MroXI GAANNNNTTC 1 cut(s) 17
MseI TTAA 1 cut(s) 1838
MspA1I CMGCKG 3 cut(s) 1418, 1510, 1830
MspI CCGG 3 cut(s) 105, 257, 659
MspR9I CCNGG 7 cut(s) 67, 469, 525, 744, 1676, 1772, 2006
MunI CAATTG 1 cut(s) 1941
Mva1269I GAATGC 3 cut(s) 59, 915, 1942
MvaI CCWGG 7 cut(s) 67, 469, 525, 744, 1676, 1772, 2006
MvnI CGCG 9 cut(s) 402, 669, 739, 858, 1318, 1510, 1645, 1763, 1830
NarI GGCGCC 2 cut(s) 1025, 1502
NcoI CCATGG 1 cut(s) 1378
NlaIII CATG 8 cut(s) 82, 614, 646, 815, 1112, 1382, 1916, 2015
NmuCI GTSAC 1 cut(s) 359
NruI TCGCGA 1 cut(s) 1318
PaeR7I CTCGAG 1 cut(s) 1257
PagI TCATGA 1 cut(s) 811
PceI AGGCCT 1 cut(s) 1213
PciSI GCTCTTC 1 cut(s) 975
PctI GAATGC 3 cut(s) 59, 915, 1942
PdmI GAANNNNTTC 1 cut(s) 17
PfeI GAWTC 9 cut(s) 161, 482, 673, 1171, 1361, 1406, 1530, 1655, 1715
Ple19I CGATCG 1 cut(s) 159
PleI GAGTC 5 cut(s) 784, 811, 1091, 1655, 1684
PluTI GGCGCC 2 cut(s) 1028, 1505
PmaCI CACGTG 1 cut(s) 2068
PmlI CACGTG 1 cut(s) 2068
PpsI GAGTC 5 cut(s) 784, 811, 1091, 1655, 1684
Ppu21I YACGTR 2 cut(s) 1234, 2068
PpuMI RGGWCCY 3 cut(s) 601, 1064, 1906
Psp124BI GAGCTC 2 cut(s) 208, 417
Psp5II RGGWCCY 3 cut(s) 601, 1064, 1906
Psp6I CCWGG 7 cut(s) 65, 467, 523, 742, 1674, 1770, 2004
PspCI CACGTG 1 cut(s) 2068
PspFI CCCAGC 1 cut(s) 244
PspGI CCWGG 7 cut(s) 65, 467, 523, 742, 1674, 1770, 2004
PspOMI GGGCCC 1 cut(s) 1740
PspPPI RGGWCCY 3 cut(s) 601, 1064, 1906
PstI CTGCAG 3 cut(s) 700, 1417, 1951
PsuI RGATCY 2 cut(s) 820, 962
PvuI CGATCG 1 cut(s) 159
PvuII CAGCTG 1 cut(s) 1418
RruI TCGCGA 1 cut(s) 1318
RsaI GTAC 4 cut(s) 239, 465, 536, 1236
RsaNI GTAC 4 cut(s) 238, 464, 535, 1235
SacI GAGCTC 2 cut(s) 208, 417
SacII CCGCGG 2 cut(s) 1511, 1831
SalI GTCGAC 2 cut(s) 120, 551
SapI GCTCTTC 1 cut(s) 975
SaqAI TTAA 1 cut(s) 1838
SchI GAGTC 5 cut(s) 784, 812, 1091, 1656, 1684
ScrFI CCNGG 7 cut(s) 67, 469, 525, 744, 1676, 1772, 2006
SduI GDGCHC 6 cut(s) 208, 417, 684, 1305, 1352, 1744
SfaNI GCATC 4 cut(s) 14, 243, 1016, 1063
SfcI CTRYAG 6 cut(s) 696, 975, 1047, 1413, 1947, 2111
SfiI GGCCNNNNNGGCC 1 cut(s) 2033
SfoI GGCGCC 2 cut(s) 1026, 1503
Sfr274I CTCGAG 1 cut(s) 1257
Sfr303I CCGCGG 2 cut(s) 1511, 1831
SgrBI CCGCGG 2 cut(s) 1511, 1831
SinI GGWCC 9 cut(s) 259, 601, 664, 930, 1064, 1189, 1881, 1906, 2101
SlaI CTCGAG 1 cut(s) 1257
SmlI CTYRAG 3 cut(s) 677, 1257, 1785
SmoI CTYRAG 3 cut(s) 677, 1257, 1785
Sse9I AATT 6 cut(s) 443, 490, 987, 1700, 1941, 2087
SseBI AGGCCT 1 cut(s) 1213
SspDI GGCGCC 2 cut(s) 1024, 1501
SspMI CTAG 6 cut(s) 279, 765, 998, 1184, 1238, 1811
SstI GAGCTC 2 cut(s) 208, 417
StuI AGGCCT 1 cut(s) 1213
StyD4I CCNGG 7 cut(s) 65, 467, 523, 742, 1674, 1770, 2004
StyI CCWWGG 3 cut(s) 764, 1344, 1378
TaaI ACNGT 3 cut(s) 596, 1294, 1336
TaiI ACGT 3 cut(s) 195, 1236, 2070
TasI AATT 6 cut(s) 443, 490, 987, 1700, 1941, 2087
TatI WGTACW 1 cut(s) 237
TauI GCSGC 7 cut(s) 59, 189, 974, 1513, 1763, 2001, 2057
TfiI GAWTC 9 cut(s) 161, 482, 673, 1171, 1361, 1406, 1530, 1655, 1715
Tru1I TTAA 1 cut(s) 1838
Tru9I TTAA 1 cut(s) 1838
TscAI CASTG 4 cut(s) 325, 832, 841, 940
TseFI GTSAC 1 cut(s) 359
TseI GCWGC 5 cut(s) 698, 1387, 1415, 1946, 1979
Tsp45I GTSAC 1 cut(s) 359
TspDTI ATGAA 8 cut(s) 54, 374, 627, 723, 831, 1125, 1461, 1983
TspGWI ACGGA 4 cut(s) 577, 862, 1023, 1683
TspRI CASTG 4 cut(s) 325, 832, 841, 940
VpaK11BI GGWCC 9 cut(s) 259, 601, 664, 930, 1064, 1189, 1881, 1906, 2101
XagI CCTNNNNNAGG 1 cut(s) 953
XbaI TCTAGA 1 cut(s) 1810
XcmI CCANNNNNNNNNTGG 1 cut(s) 373
XhoI CTCGAG 1 cut(s) 1257
XmaJI CCTAGG 1 cut(s) 764
XmiI GTMKAC 2 cut(s) 121, 552
XmnI GAANNNNTTC 1 cut(s) 17
XspI CTAG 6 cut(s) 279, 765, 998, 1184, 1238, 1811
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.