Rmu_sc0000356.1_g000007

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000356.1
OG0000214
Physical Location & Seq
Reverse (-)
48711 .. 51632
2922 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000356.1_g000007.1.cds

Sequence Viewer

Length: 1647 bp
atggcacccaagaaaccattcgttatcgatcaggcagatgaaatcactgagaaagctgcattcacttggcggagtcagatcagagaggagagaagtcgactgatgggctttggtagaggtgataatcaagcaagtctgggtcccacacctcgcgattttttgctagatgatgctatggcctattatgggcttcccatctgccatcccataacggctcttcggcaggtgcccggtgattttagcagttgggggccaaggaggagagtgggtttctggcctaccatctctcccgaggaaaatgattggtatcaggaggtccaagcgagagatttggcccgttgggatgcggtggatgagcataactctgctagatgttcttaccatcacgggttgcccattgactttgacccctatgtgcatggtcagtttgatggcattcaatttcctttgagaatggatacggctggtcgggggcatcacagtaaatcctacccattctggtgcgactattactacacccagcatgaccacataggaggtatcgcattcttggaattctggctttgcaaatttatcttttgcacttcttccaacaaacctactcggccctggaattctctgaccattgctctctacaatggtatttgtggttgccttgggcaacttgtattgggtgagttatattgctccctttataaagctataatgctccccttcgataccgacattagtggccctttctggatccttgccttttggctgcagatttatttccctcgcttccgtctcagtgatattccaaaggatcctccagtcgattcccttttggggaattggctttgtcgcaacgtaagtggacgggatcatagcgaaagagctctcttggcctttcgtcgcgccatctcttacttggatattcgtcttgccaccggccgcgtaagctacgagctctatgcccccaaccacttcgcttgccaatttgggttggcccagttgagcaggacaacctctgttcaagaagggaaacaaaagacaatagcagaggagactcctgagggagagtcttctcatgatgaagatctcgttgaggccactgctttcttcgctggcaaacgtgatcgagctcaattcgtcaaagagagtttggaagatgacgaacctctgggaatgccattggattctgtttgtgccgaggaggtggtccttgaagccgaagatctggctagcgggacgtacatcccaggtttgggggatgaggcgagcagtggtggtctcttgatttctaaaatagacgatgcgagcgttgaggctgaaggttctgctgtcggagctgcacatttccaacactctattgatgaacctcacattgaatttccagagtctcccgcgactaagacatcggaccaagctcagggggttgttgagggaaattacgctgaagatgaaagaattgaggaaccaattgaccttctagcattggtgacttatgatcgtgctatgaatcctctacctcctcccactaggcttgaaaagctagctcaaatccttaaggaaactcctcctatcgccgctgaactagcgaggacagagcttcgaaaccttttaggacaacggcggctggggactgaagaactccccaggatctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

548

Amino Acids

61.64

Weight (kDa)

4.9

Isoelectric Point (pI)

46.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000214)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0079611
rosa_multiflora Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha Rh3DG208400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 696
AarI CACCTGC 1 cut(s) 214
Acc36I ACCTGC 1 cut(s) 214
AccB1I GGYRCC 2 cut(s) 4, 226
AccI GTMKAC 1 cut(s) 97
AccII CGCG 4 cut(s) 153, 897, 936, 1388
AciI CCGC 7 cut(s) 70, 347, 934, 1227, 1386, 1569, 1615
AclWI GGATC 5 cut(s) 739, 752, 800, 813, 870
AcoI YGGCCR 1 cut(s) 931
AcsI RAATTY 4 cut(s) 554, 569, 613, 1370
AcuI CTGAAG 3 cut(s) 1332, 1458, 1647
AfaI GTAC 1 cut(s) 1235
AfiI CCNNNNNNNGG 5 cut(s) 186, 828, 1246, 1247, 1411
AflII CTTAAG 1 cut(s) 1547
AgsI TTSAA 5 cut(s) 440, 1016, 1208, 1370, 1529
AjnI CCWGG 3 cut(s) 608, 1240, 1637
AjuI GAANNNNNNNTTGG 1 cut(s) 34
Alw21I GWGCWC 3 cut(s) 880, 951, 1126
Alw26I GTCTC 4 cut(s) 791, 1040, 1277, 1386
AlwI GGATC 5 cut(s) 739, 752, 800, 813, 870
Ama87I CYCGRG 1 cut(s) 290
ApeKI GCWGC 3 cut(s) 56, 760, 1331
ApoI RAATTY 4 cut(s) 554, 569, 613, 1370
Asp700I GAANNNNTTC 1 cut(s) 17
AspLEI GCGC 1 cut(s) 899
AspS9I GGNCC 9 cut(s) 140, 251, 316, 334, 606, 734, 988, 1201, 1402
AsuC2I CCSGG 1 cut(s) 231
AsuHPI GGTGA 4 cut(s) 131, 245, 686, 1492
AsuII TTCGAA 1 cut(s) 1594
AsuNHI GCTAGC 2 cut(s) 1223, 1534
AvaI CYCGRG 1 cut(s) 290
AvaII GGWCC 4 cut(s) 140, 316, 1201, 1402
AxyI CCTNAGG 1 cut(s) 1053
BaeGI GKGCMC 1 cut(s) 231
BamHI GGATCC 2 cut(s) 744, 805
BanI GGYRCC 2 cut(s) 4, 226
BanII GRGCYC 3 cut(s) 880, 951, 1126
BbsI GAAGAC 1 cut(s) 1056
Bbv12I GWGCWC 3 cut(s) 880, 951, 1126
BbvI GCAGC 3 cut(s) 43, 747, 1318
BccI CCATC 7 cut(s) 97, 203, 210, 290, 390, 425, 908
BceAI ACGGC 3 cut(s) 228, 477, 1628
BcgI CGANNNNNNTGC 2 cut(s) 935, 969
BciT130I CCWGG 3 cut(s) 610, 1242, 1639
BciVI GTATCC 1 cut(s) 451
BcnI CCSGG 1 cut(s) 231
BcoDI GTCTC 4 cut(s) 791, 1040, 1277, 1386
BfaI CTAG 8 cut(s) 164, 369, 1224, 1472, 1521, 1535, 1577, 1645
BfmI CTRYAG 1 cut(s) 761
BfrI CTTAAG 1 cut(s) 1547
BfuAI ACCTGC 1 cut(s) 214
BfuI GTATCC 1 cut(s) 451
BglII AGATCT 2 cut(s) 1078, 1216
BisI GCNGC 6 cut(s) 57, 761, 934, 1332, 1569, 1616
BlsI GCNGC 6 cut(s) 58, 762, 935, 1333, 1570, 1617
Bme1390I CCNGG 4 cut(s) 231, 610, 1242, 1639
Bme18I GGWCC 4 cut(s) 140, 316, 1201, 1402
BmeT110I CYCGRG 1 cut(s) 290
BmgT120I GGNCC 9 cut(s) 140, 251, 316, 334, 606, 734, 988, 1201, 1402
BmiI GGNNCC 8 cut(s) 6, 141, 142, 228, 252, 746, 807, 1458
BmrFI CCNGG 4 cut(s) 231, 610, 1242, 1639
BmrI ACTGGG 1 cut(s) 985
BmsI GCATC 4 cut(s) 160, 334, 484, 1285
BmtI GCTAGC 2 cut(s) 1227, 1538
BmuI ACTGGG 1 cut(s) 985
BpiI GAAGAC 1 cut(s) 1056
BplI GAGNNNNNCTC 2 cut(s) 347, 379
BpmI CTGGAG 1 cut(s) 795
Bpu10I CCTNAGC 1 cut(s) 1410
Bpu14I TTCGAA 1 cut(s) 1594
BpuMI CCSGG 1 cut(s) 231
Bsa29I ATCGAT 1 cut(s) 27
BsaBI GATNNNNATC 2 cut(s) 306, 1077
BsaI GGTCTC 1 cut(s) 1277
BsaJI CCNNGG 7 cut(s) 254, 291, 608, 655, 1191, 1240, 1637
BsaXI ACNNNNNCTCC 4 cut(s) 253, 271, 283, 301
Bsc4I CCNNNNNNNGG 5 cut(s) 186, 828, 1246, 1247, 1411
Bse118I RCCGGY 1 cut(s) 929
Bse1I ACTGG 2 cut(s) 812, 991
Bse21I CCTNAGG 1 cut(s) 1053
Bse3DI GCAATG 1 cut(s) 624
Bse8I GATNNNNATC 2 cut(s) 306, 1077
BseBI CCWGG 3 cut(s) 610, 1242, 1639
BseCI ATCGAT 1 cut(s) 27
BseDI CCNNGG 7 cut(s) 254, 291, 608, 655, 1191, 1240, 1637
BseGI GGATG 5 cut(s) 202, 349, 358, 1236, 1258
BseJI GATNNNNATC 2 cut(s) 306, 1077
BseLI CCNNNNNNNGG 5 cut(s) 186, 828, 1246, 1247, 1411
BseMI GCAATG 1 cut(s) 624
BseMII CTCAG 4 cut(s) 39, 802, 1044, 1424
BseNI ACTGG 2 cut(s) 812, 991
BseRI GAGGAG 6 cut(s) 101, 274, 1058, 1208, 1503, 1548
BseSI GKGCMC 1 cut(s) 231
BseX3I CGGCCG 1 cut(s) 931
BseXI GCAGC 3 cut(s) 43, 747, 1318
BseYI CCCAGC 2 cut(s) 519, 1618
BsgI GTGCAG 1 cut(s) 1317
Bsh1236I CGCG 4 cut(s) 153, 897, 936, 1388
Bsh1285I CGRYCG 1 cut(s) 934
BshNI GGYRCC 2 cut(s) 4, 226
BshVI ATCGAT 1 cut(s) 27
BsiEI CGRYCG 1 cut(s) 934
BsiHKAI GWGCWC 3 cut(s) 880, 951, 1126
BsiHKCI CYCGRG 1 cut(s) 290
BsiSI CCGG 2 cut(s) 231, 930
BslFI GGGAC 3 cut(s) 126, 1243, 1636
BslI CCNNNNNNNGG 5 cut(s) 186, 828, 1246, 1247, 1411
BsmAI GTCTC 4 cut(s) 791, 1040, 1277, 1386
BsmBI CGTCTC 1 cut(s) 791
BsmFI GGGAC 3 cut(s) 126, 1243, 1636
BsmI GAATGC 4 cut(s) 59, 435, 545, 1173
Bso31I GGTCTC 1 cut(s) 1277
BsoBI CYCGRG 1 cut(s) 290
Bsp119I TTCGAA 1 cut(s) 1594
Bsp1286I GDGCHC 4 cut(s) 231, 880, 951, 1126
Bsp68I TCGCGA 1 cut(s) 153
BspACI CCGC 7 cut(s) 70, 347, 934, 1227, 1386, 1569, 1615
BspCNI CTCAG 4 cut(s) 40, 801, 1045, 1423
BspDI ATCGAT 1 cut(s) 27
BspFNI CGCG 4 cut(s) 153, 897, 936, 1388
BspHI TCATGA 1 cut(s) 1069
BspLI GGNNCC 8 cut(s) 6, 141, 142, 228, 252, 746, 807, 1458
BspMAI CTGCAG 1 cut(s) 765
BspMI ACCTGC 1 cut(s) 214
BspOI GCTAGC 2 cut(s) 1227, 1538
BspPI GGATC 5 cut(s) 739, 752, 800, 813, 870
BspQI GCTCTTC 1 cut(s) 222
BspT104I TTCGAA 1 cut(s) 1594
BspT107I GGYRCC 2 cut(s) 4, 226
BspTI CTTAAG 1 cut(s) 1547
BspTNI GGTCTC 1 cut(s) 1277
BsrDI GCAATG 1 cut(s) 624
BsrFI RCCGGY 1 cut(s) 929
BsrI ACTGG 2 cut(s) 812, 991
BssAI RCCGGY 1 cut(s) 929
BssECI CCNNGG 7 cut(s) 254, 291, 608, 655, 1191, 1240, 1637
BssT1I CCWWGG 2 cut(s) 254, 655
Bst2UI CCWGG 3 cut(s) 610, 1242, 1639
Bst4CI ACNGT 1 cut(s) 482
Bst6I CTCTTC 1 cut(s) 222
BstAFI CTTAAG 1 cut(s) 1547
BstBI TTCGAA 1 cut(s) 1594
BstC8I GCNNGC 6 cut(s) 973, 1108, 1225, 1261, 1300, 1536
BstDEI CTNAG 5 cut(s) 48, 788, 1053, 1392, 1410
BstF5I GGATG 5 cut(s) 202, 349, 358, 1236, 1258
BstFNI CGCG 4 cut(s) 153, 897, 936, 1388
BstHHI GCGC 1 cut(s) 899
BstMAI GTCTC 4 cut(s) 791, 1040, 1277, 1386
BstMCI CGRYCG 1 cut(s) 934
BstMWI GCNNNNNNNGC 6 cut(s) 884, 939, 1103, 1328, 1531, 1577
BstNI CCWGG 3 cut(s) 610, 1242, 1639
BstSCI CCNGG 4 cut(s) 229, 608, 1240, 1637
BstSFI CTRYAG 1 cut(s) 761
BstSLI GKGCMC 1 cut(s) 231
BstUI CGCG 4 cut(s) 153, 897, 936, 1388
BstV1I GCAGC 3 cut(s) 43, 747, 1318
BstV2I GAAGAC 1 cut(s) 1056
BstX2I RGATCY 5 cut(s) 744, 805, 1078, 1216, 1641
BstYI RGATCY 5 cut(s) 744, 805, 1078, 1216, 1641
BstZI CGGCCG 1 cut(s) 931
Bsu15I ATCGAT 1 cut(s) 27
Bsu36I CCTNAGG 1 cut(s) 1053
BsuI GTATCC 1 cut(s) 451
BsuTUI ATCGAT 1 cut(s) 27
BtsCI GGATG 5 cut(s) 202, 349, 358, 1236, 1258
BtsI GCAGTG 2 cut(s) 1092, 1270
BtsIMutI CAGTG 4 cut(s) 45, 796, 1092, 1270
BtuMI TCGCGA 1 cut(s) 153
BveI ACCTGC 1 cut(s) 214
Cac8I GCNNGC 6 cut(s) 973, 1108, 1225, 1261, 1300, 1536
CciI TCATGA 1 cut(s) 1069
CfoI GCGC 1 cut(s) 899
Cfr10I RCCGGY 1 cut(s) 929
Cfr13I GGNCC 9 cut(s) 140, 251, 316, 334, 606, 734, 988, 1201, 1402
ClaI ATCGAT 1 cut(s) 27
Csp6I GTAC 1 cut(s) 1234
CspCI CAANNNNNGTGG 6 cut(s) 835, 870, 953, 988, 1507, 1542
CviAII CATG 3 cut(s) 419, 524, 1070
CviQI GTAC 1 cut(s) 1234
DdeI CTNAG 5 cut(s) 48, 788, 1053, 1392, 1410
EaeI YGGCCR 1 cut(s) 931
EagI CGGCCG 1 cut(s) 931
Eam1104I CTCTTC 1 cut(s) 222
EarI CTCTTC 1 cut(s) 222
EciI GGCGGA 1 cut(s) 85
Ecl136II GAGCTC 3 cut(s) 878, 949, 1124
EclXI CGGCCG 1 cut(s) 931
Eco130I CCWWGG 2 cut(s) 254, 655
Eco24I GRGCYC 3 cut(s) 880, 951, 1126
Eco31I GGTCTC 1 cut(s) 1277
Eco47I GGWCC 4 cut(s) 140, 316, 1201, 1402
Eco52I CGGCCG 1 cut(s) 931
Eco53kI GAGCTC 3 cut(s) 878, 949, 1124
Eco57I CTGAAG 3 cut(s) 1332, 1458, 1647
Eco81I CCTNAGG 1 cut(s) 1053
Eco88I CYCGRG 1 cut(s) 290
EcoICRI GAGCTC 3 cut(s) 878, 949, 1124
EcoO109I RGGNCCY 1 cut(s) 140
EcoRI GAATTC 2 cut(s) 554, 613
EcoRII CCWGG 3 cut(s) 608, 1240, 1637
EcoT14I CCWWGG 2 cut(s) 254, 655
EcoT38I GRGCYC 3 cut(s) 880, 951, 1126
ErhI CCWWGG 2 cut(s) 254, 655
Esp3I CGTCTC 1 cut(s) 791
FaeI CATG 3 cut(s) 422, 527, 1073
FaqI GGGAC 3 cut(s) 126, 1243, 1636
FatI CATG 3 cut(s) 418, 523, 1069
FauI CCCGC 2 cut(s) 1220, 1393
FblI GTMKAC 1 cut(s) 97
Fnu4HI GCNGC 6 cut(s) 57, 761, 934, 1332, 1569, 1616
FokI GGATG 5 cut(s) 189, 356, 365, 1223, 1265
FriOI GRGCYC 3 cut(s) 880, 951, 1126
Fsp4HI GCNGC 6 cut(s) 57, 761, 934, 1332, 1569, 1616
FspBI CTAG 8 cut(s) 164, 369, 1224, 1472, 1521, 1535, 1577, 1645
GlaI GCGC 1 cut(s) 898
GluI GCNGC 6 cut(s) 57, 761, 934, 1332, 1569, 1616
GsaI CCCAGC 2 cut(s) 523, 1622
GsuI CTGGAG 1 cut(s) 795
HapII CCGG 2 cut(s) 231, 930
HhaI GCGC 1 cut(s) 899
Hin1II CATG 3 cut(s) 422, 527, 1073
Hin6I GCGC 1 cut(s) 897
HinP1I GCGC 1 cut(s) 897
HincII GTYRAC 1 cut(s) 98
HindII GTYRAC 1 cut(s) 98
HinfI GANTC 7 cut(s) 73, 818, 1048, 1061, 1178, 1379, 1501
HpaII CCGG 2 cut(s) 231, 930
HphI GGTGA 4 cut(s) 131, 245, 686, 1492
Hpy166II GTNNAC 2 cut(s) 98, 857
Hpy188I TCNGA 5 cut(s) 78, 83, 621, 1328, 1402
Hpy188III TCNNGA 9 cut(s) 152, 290, 311, 742, 1016, 1052, 1070, 1276, 1376
Hpy8I GTNNAC 2 cut(s) 98, 857
Hpy99I CGWCG 1 cut(s) 897
HpyAV CCTTC 4 cut(s) 724, 1013, 1307, 1478
HpyCH4III ACNGT 1 cut(s) 482
HpyCH4IV ACGT 3 cut(s) 849, 1114, 1232
HpyCH4V TGCA 6 cut(s) 59, 418, 567, 582, 763, 1334
HpyF10VI GCNNNNNNNGC 6 cut(s) 884, 939, 1103, 1328, 1531, 1577
HpyF3I CTNAG 5 cut(s) 48, 788, 1053, 1392, 1410
HpySE526I ACGT 3 cut(s) 849, 1114, 1232
Hsp92II CATG 3 cut(s) 422, 527, 1073
HspAI GCGC 1 cut(s) 897
KflI GGGWCCC 1 cut(s) 140
LguI GCTCTTC 1 cut(s) 222
LmnI GCTCC 3 cut(s) 692, 714, 1328
Lsp1109I GCAGC 3 cut(s) 43, 747, 1318
LweI GCATC 4 cut(s) 160, 334, 484, 1285
MaeI CTAG 8 cut(s) 164, 369, 1224, 1472, 1521, 1535, 1577, 1645
MaeII ACGT 3 cut(s) 849, 1114, 1232
MaeIII GTNAC 1 cut(s) 1480
MboII GAAGA 9 cut(s) 209, 579, 1056, 1088, 1093, 1160, 1226, 1451, 1640
MfeI CAATTG 1 cut(s) 1461
MflI RGATCY 5 cut(s) 744, 805, 1078, 1216, 1641
MhlI GDGCHC 4 cut(s) 231, 880, 951, 1126
MlyI GAGTC 4 cut(s) 82, 1042, 1070, 1388
MmeI TCCRAC 3 cut(s) 615, 1306, 1366
MroXI GAANNNNTTC 1 cut(s) 17
MseI TTAA 1 cut(s) 1548
MslI CAYNNNNRTG 1 cut(s) 499
MspA1I CMGCKG 1 cut(s) 1571
MspCI CTTAAG 1 cut(s) 1547
MspI CCGG 2 cut(s) 231, 930
MspR9I CCNGG 4 cut(s) 231, 610, 1242, 1639
MunI CAATTG 1 cut(s) 1461
Mva1269I GAATGC 4 cut(s) 59, 435, 545, 1173
MvaI CCWGG 3 cut(s) 610, 1242, 1639
MvnI CGCG 4 cut(s) 153, 897, 936, 1388
MwoI GCNNNNNNNGC 6 cut(s) 884, 939, 1103, 1328, 1531, 1577
NciI CCSGG 1 cut(s) 231
NheI GCTAGC 2 cut(s) 1223, 1534
NlaIII CATG 3 cut(s) 422, 527, 1073
NlaIV GGNNCC 8 cut(s) 6, 141, 142, 228, 252, 746, 807, 1458
NmeAIII GCCGAG 2 cut(s) 583, 1216
NmuCI GTSAC 1 cut(s) 1480
NruI TCGCGA 1 cut(s) 153
NspV TTCGAA 1 cut(s) 1594
PagI TCATGA 1 cut(s) 1069
PaqCI CACCTGC 1 cut(s) 214
PciSI GCTCTTC 1 cut(s) 222
PcsI WCGNNNNNNNCGW 1 cut(s) 1299
PctI GAATGC 4 cut(s) 59, 435, 545, 1173
PdmI GAANNNNTTC 1 cut(s) 17
PfeI GAWTC 3 cut(s) 818, 1178, 1501
PkrI GCNGC 6 cut(s) 58, 762, 935, 1333, 1570, 1617
PleI GAGTC 4 cut(s) 81, 1042, 1069, 1387
PpsI GAGTC 4 cut(s) 81, 1042, 1069, 1387
PpuMI RGGWCCY 1 cut(s) 140
PsiI TTATAA 1 cut(s) 696
Psp124BI GAGCTC 3 cut(s) 880, 951, 1126
Psp5II RGGWCCY 1 cut(s) 140
Psp6I CCWGG 3 cut(s) 608, 1240, 1637
PspFI CCCAGC 2 cut(s) 519, 1618
PspGI CCWGG 3 cut(s) 608, 1240, 1637
PspN4I GGNNCC 8 cut(s) 6, 141, 142, 228, 252, 746, 807, 1458
PspPI GGNCC 9 cut(s) 140, 251, 316, 334, 606, 734, 988, 1201, 1402
PspPPI RGGWCCY 1 cut(s) 140
PstI CTGCAG 1 cut(s) 765
PsuI RGATCY 5 cut(s) 744, 805, 1078, 1216, 1641
RruI TCGCGA 1 cut(s) 153
RsaI GTAC 1 cut(s) 1235
RsaNI GTAC 1 cut(s) 1234
RseI CAYNNNNRTG 1 cut(s) 499
SacI GAGCTC 3 cut(s) 880, 951, 1126
SalI GTCGAC 1 cut(s) 96
SapI GCTCTTC 1 cut(s) 222
SaqAI TTAA 1 cut(s) 1548
SatI GCNGC 6 cut(s) 57, 761, 934, 1332, 1569, 1616
Sau96I GGNCC 9 cut(s) 140, 251, 316, 334, 606, 734, 988, 1201, 1402
SchI GAGTC 4 cut(s) 82, 1042, 1070, 1388
ScrFI CCNGG 4 cut(s) 231, 610, 1242, 1639
SduI GDGCHC 4 cut(s) 231, 880, 951, 1126
SfaNI GCATC 4 cut(s) 160, 334, 484, 1285
SfcI CTRYAG 1 cut(s) 761
SfuI TTCGAA 1 cut(s) 1594
SinI GGWCC 4 cut(s) 140, 316, 1201, 1402
SmiMI CAYNNNNRTG 1 cut(s) 499
SmlI CTYRAG 1 cut(s) 1547
SmoI CTYRAG 1 cut(s) 1547
SsiI CCGC 7 cut(s) 70, 347, 934, 1227, 1386, 1569, 1615
SspMI CTAG 8 cut(s) 164, 369, 1224, 1472, 1521, 1535, 1577, 1645
SstI GAGCTC 3 cut(s) 880, 951, 1126
StyD4I CCNGG 4 cut(s) 229, 608, 1240, 1637
StyI CCWWGG 2 cut(s) 254, 655
TaaI ACNGT 1 cut(s) 482
TaiI ACGT 3 cut(s) 852, 1117, 1235
TaqI TCGA 6 cut(s) 27, 97, 717, 816, 1120, 1594
TauI GCSGC 3 cut(s) 936, 1571, 1618
TfiI GAWTC 3 cut(s) 818, 1178, 1501
Tru1I TTAA 1 cut(s) 1548
Tru9I TTAA 1 cut(s) 1548
TscAI CASTG 4 cut(s) 52, 796, 1099, 1270
TseFI GTSAC 1 cut(s) 1480
TseI GCWGC 3 cut(s) 56, 760, 1331
Tsp45I GTSAC 1 cut(s) 1480
TspDTI ATGAA 5 cut(s) 54, 1089, 1371, 1458, 1514
TspGWI ACGGA 1 cut(s) 773
TspRI CASTG 4 cut(s) 52, 796, 1099, 1270
Vha464I CTTAAG 1 cut(s) 1547
VpaK11BI GGWCC 4 cut(s) 140, 316, 1201, 1402
XapI RAATTY 4 cut(s) 554, 569, 613, 1370
XcmI CCANNNNNNNNNTGG 1 cut(s) 907
XmiI GTMKAC 1 cut(s) 97
XmnI GAANNNNTTC 1 cut(s) 17
XspI CTAG 8 cut(s) 164, 369, 1224, 1472, 1521, 1535, 1577, 1645
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.