Rmu_sc0001254.1_g000006

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001254.1
OG0000214
Physical Location & Seq
Reverse (-)
17630 .. 20136
2507 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001254.1_g000006.1.cds

Sequence Viewer

Length: 1995 bp
atgtgcccatttgataccgacattagttgccccttctggatccttgccttttggctgcatatttatttcactctcttccgtcgcgacgatattccaaaggaacctccagttgattcccttttggggaactggctttgccgcaacgtaagtcctgatggctttctgcccaatggacgggatcatagtgaaagagctctcctggcctttcgtcgcgccatctcctgcttggatattcgtcttaccactgattgcgtaagttacgagctctacgcccctaactactttgctcgccaatttgggttggcccaattggtaccctggcctctggttgattctgccaattactacacctcttggcggaaattagccccgcctgggtctgccccctttcagagtcagtttactttgatagtgattcccccttgggtcagaacgctataccccctcaatgatgtcgatgatgactatgctgattggtggaaagaagtgtcaatgcactgttgggacctgccacatgacgaactcttcgtcctgatctttcgtggcatgagtagccctggtccggaggaccgcgagattcttgagcgctactccaaacctgcagaacaacccccgcgacctattctaccttctcgctcattgcgtctagggatacaaatccacgagcctagggcaacacaaactacccggagcaggacaacctctgttcaggccgggaaacaaaaagcaatagaagaggagacttctgagggagagtcttcacatgatgaagatcctgctggggccactgctgtctttgcttgcaaacgcgaccgagctcaattcgtcgaagagagttttgaagatgacgaacctatgggaatgcgactggtccgtcaaaggaccactgatccttcttgcctgagcgaggctggaccctcagccactacaaaagagccaattctctcgctagttcaagcatcaactaaccctgtgtcaccactcccatctcccactacagagtatctgcaaggtcctaccattcttataacgatctctgatgacgactcctcggaggatgaaagcgtagaaagccactctgagacttctgccgcttatgaggaactgatgacgacagagattctcgcggtactagagattcaagaggtgaatgaggcagggcctcttcctcttgctgactacgtaccggatattgacccgacagctcgagaggaggtggcaacaaacactgagggtcctattggcgggacagtcgccccagagatggaaaatgatactgacgattcccctgaggctgaagagacagaccaacctgttgaagatgaagaaattgaggaagctgtccacccttttgcattggtggttcgtgatcctgtggcgcctctgccgcctcctcctcctcctaccagattcgagagattgatgagggtgttggaggtaactcttccttctactatggatgaggctaagatggtgcttcacgaacatctgggtcctcaggtattggagactgacattctcccgcgagtcttggaagctctaaggtatcttcgccaggagaaggtattgaccctgcagcaatttagtgctattgatgatctgttgaatgaacttgatatggctcgccgacgtcaattggccgcgaacacccaggctcgggatgctcaagaggctttgaatagtgtctctcgagaaatggacatctcccgcgatattttaaatgaacgatccatccgcatgcgggaactacaaatccaaaggtccgacttcaaacttcaaatcgaggacctccaagcccatttagcctttgttgagaatgcgattgttgcagaagaagctcaactcgatgagcctttagctgcttctgaagaaatgggccgcaacctggcccgtatcagagatcgggccactcaggccgaagctggtgctattgaggcgaaacgccacgtggaggaactttgtttgaaattgagctttgcaagccaatctttgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

664

Amino Acids

74.81

Weight (kDa)

4.5

Isoelectric Point (pI)

64.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000214)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0079611
rosa_multiflora Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha Rh3DG208400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1028
AasI GACNNNNNNGTC 1 cut(s) 873
AatII GACGTC 1 cut(s) 1633
Acc36I ACCTGC 2 cut(s) 516, 607
Acc65I GGTACC 1 cut(s) 313
AccB1I GGYRCC 2 cut(s) 313, 1378
AccII CGCG 9 cut(s) 84, 213, 573, 616, 810, 1127, 1525, 1643, 1710
AccIII TCCGGA 1 cut(s) 562
AclWI GGATC 7 cut(s) 34, 47, 186, 767, 884, 1364, 1722
AcoI YGGCCR 1 cut(s) 1638
AcuI CTGAAG 2 cut(s) 1317, 1887
AcvI CACGTG 1 cut(s) 1948
AcyI GRCGYC 2 cut(s) 1379, 1630
AfaI GTAC 3 cut(s) 315, 1131, 1185
AfeI AGCGCT 1 cut(s) 587
AgsI TTSAA 9 cut(s) 842, 956, 1142, 1319, 1606, 1678, 1771, 1778, 1966
AjnI CCWGG 7 cut(s) 198, 317, 373, 556, 1554, 1650, 1884
AloI GAACNNNNNNTCC 6 cut(s) 513, 545, 1716, 1737, 1748, 1769
Alw21I GWGCWC 3 cut(s) 196, 267, 820
Alw26I GTCTC 5 cut(s) 734, 1076, 1295, 1502, 1690
AlwI GGATC 7 cut(s) 34, 47, 186, 767, 884, 1364, 1722
Ama87I CYCGRG 3 cut(s) 1206, 1656, 1689
Aor13HI TCCGGA 1 cut(s) 562
Aor51HI AGCGCT 1 cut(s) 587
ApeKI GCWGC 3 cut(s) 55, 1576, 1859
ArsI GACNNNNNNTTYG 4 cut(s) 509, 513, 541, 545
Asp718I GGTACC 1 cut(s) 313
AspA2I CCTAGG 1 cut(s) 668
AspLEI GCGC 3 cut(s) 215, 588, 1381
AsuC2I CCSGG 2 cut(s) 688, 715
AsuHPI GGTGA 2 cut(s) 969, 1159
AvaI CYCGRG 3 cut(s) 1206, 1656, 1689
AvrII CCTAGG 1 cut(s) 668
AxyI CCTNAGG 2 cut(s) 1290, 1497
BaeGI GKGCMC 1 cut(s) 8
BamHI GGATCC 1 cut(s) 39
BanI GGYRCC 2 cut(s) 313, 1378
BanII GRGCYC 3 cut(s) 196, 267, 820
BauI CACGAG 1 cut(s) 662
BbrPI CACGTG 1 cut(s) 1948
BbsI GAAGAC 1 cut(s) 750
Bbv12I GWGCWC 3 cut(s) 196, 267, 820
BbvCI CCTCAGC 1 cut(s) 919
BbvI GCAGC 3 cut(s) 42, 1588, 1846
BccI CCATC 6 cut(s) 149, 224, 994, 1258, 1465, 1739
BcgI CGANNNNNNTGC 2 cut(s) 1907, 1941
BciT130I CCWGG 7 cut(s) 200, 319, 375, 558, 1556, 1652, 1886
BciVI GTATCC 1 cut(s) 645
BcnI CCSGG 2 cut(s) 688, 715
BcoDI GTCTC 5 cut(s) 734, 1076, 1295, 1502, 1690
BfaI CTAG 4 cut(s) 647, 669, 950, 1133
BfmI CTRYAG 3 cut(s) 600, 996, 1574
BfoI RGCGCY 2 cut(s) 589, 1382
BfuAI ACCTGC 2 cut(s) 516, 607
BfuI GTATCC 1 cut(s) 645
BglI GCCNNNNNGGC 1 cut(s) 1913
BisI GCNGC 8 cut(s) 56, 139, 1092, 1388, 1577, 1641, 1860, 1879
BlnI CCTAGG 1 cut(s) 668
BlsI GCNGC 8 cut(s) 57, 140, 1093, 1389, 1578, 1642, 1861, 1880
Bme1390I CCNGG 9 cut(s) 200, 319, 375, 558, 688, 715, 1556, 1652, 1886
BmeT110I CYCGRG 3 cut(s) 1206, 1656, 1689
BmiI GGNNCC 9 cut(s) 41, 102, 315, 506, 784, 916, 1236, 1380, 1494
BmrFI CCNGG 9 cut(s) 200, 319, 375, 558, 688, 715, 1556, 1652, 1886
BmsI GCATC 2 cut(s) 968, 1651
BpiI GAAGAC 1 cut(s) 750
BplI GAGNNNNNCTC 2 cut(s) 575, 607
BpmI CTGGAG 1 cut(s) 90
Bpu10I CCTNAGC 2 cut(s) 902, 919
BpuEI CTTGAG 2 cut(s) 602, 1650
BpuMI CCSGG 2 cut(s) 688, 715
BsaAI YACGTR 2 cut(s) 1183, 1948
BsaBI GATNNNNATC 2 cut(s) 656, 771
BsaHI GRCGYC 2 cut(s) 1379, 1630
BsaJI CCNNGG 7 cut(s) 317, 374, 422, 556, 668, 1050, 1650
BsaWI WCCGGW 2 cut(s) 562, 1186
Bse1I ACTGG 3 cut(s) 107, 134, 873
Bse21I CCTNAGG 2 cut(s) 1290, 1497
Bse3DI GCAATG 1 cut(s) 638
Bse8I GATNNNNATC 2 cut(s) 656, 771
BseAI TCCGGA 1 cut(s) 562
BseBI CCWGG 7 cut(s) 200, 319, 375, 558, 1556, 1652, 1886
BseDI CCNNGG 7 cut(s) 317, 374, 422, 556, 668, 1050, 1650
BseGI GGATG 4 cut(s) 1063, 1465, 1666, 1731
BseJI GATNNNNATC 2 cut(s) 656, 771
BseMI GCAATG 1 cut(s) 638
BseMII CTCAG 8 cut(s) 738, 893, 933, 1071, 1221, 1281, 1511, 1925
BseNI ACTGG 3 cut(s) 107, 134, 873
BseRI GAGGAG 6 cut(s) 752, 1039, 1226, 1383, 1386, 1389
BseSI GKGCMC 1 cut(s) 8
BseXI GCAGC 3 cut(s) 42, 1588, 1846
BseYI CCCAGC 1 cut(s) 779
Bsh1236I CGCG 9 cut(s) 84, 213, 573, 616, 810, 1127, 1525, 1643, 1710
Bsh1285I CGRYCG 1 cut(s) 814
BshNI GGYRCC 2 cut(s) 313, 1378
BsiEI CGRYCG 1 cut(s) 814
BsiHKAI GWGCWC 3 cut(s) 196, 267, 820
BsiHKCI CYCGRG 3 cut(s) 1206, 1656, 1689
BsiSI CCGG 4 cut(s) 563, 688, 714, 1187
BslFI GGGAC 2 cut(s) 518, 1261
BsmAI GTCTC 5 cut(s) 734, 1076, 1295, 1502, 1690
BsmFI GGGAC 2 cut(s) 518, 1261
BsmI GAATGC 2 cut(s) 867, 1822
BsoBI CYCGRG 3 cut(s) 1206, 1656, 1689
Bsp1286I GDGCHC 4 cut(s) 8, 196, 267, 820
Bsp13I TCCGGA 1 cut(s) 562
Bsp68I TCGCGA 1 cut(s) 84
BspCNI CTCAG 8 cut(s) 739, 894, 932, 1072, 1222, 1282, 1510, 1924
BspEI TCCGGA 1 cut(s) 562
BspFNI CGCG 9 cut(s) 84, 213, 573, 616, 810, 1127, 1525, 1643, 1710
BspLI GGNNCC 9 cut(s) 41, 102, 315, 506, 784, 916, 1236, 1380, 1494
BspMAI CTGCAG 2 cut(s) 604, 1578
BspMI ACCTGC 2 cut(s) 516, 607
BspPI GGATC 7 cut(s) 34, 47, 186, 767, 884, 1364, 1722
BspT107I GGYRCC 2 cut(s) 313, 1378
BsrDI GCAATG 1 cut(s) 638
BsrI ACTGG 3 cut(s) 107, 134, 873
BssECI CCNNGG 7 cut(s) 317, 374, 422, 556, 668, 1050, 1650
BssNI GRCGYC 2 cut(s) 1379, 1630
BssSI CACGAG 1 cut(s) 662
BssT1I CCWWGG 2 cut(s) 422, 668
Bst2BI CACGAG 1 cut(s) 662
Bst2UI CCWGG 7 cut(s) 200, 319, 375, 558, 1556, 1652, 1886
Bst4CI ACNGT 2 cut(s) 500, 1252
Bst6I CTCTTC 7 cut(s) 80, 530, 729, 825, 1170, 1293, 1449
BstACI GRCGYC 2 cut(s) 1379, 1630
BstBAI YACGTR 2 cut(s) 1183, 1948
BstC8I GCNNGC 5 cut(s) 289, 802, 1624, 1739, 1981
BstENI CCTNNNNNAGG 1 cut(s) 905
BstF5I GGATG 4 cut(s) 1063, 1465, 1666, 1731
BstFNI CGCG 9 cut(s) 84, 213, 573, 616, 810, 1127, 1525, 1643, 1710
BstH2I RGCGCY 2 cut(s) 589, 1382
BstHHI GCGC 3 cut(s) 215, 588, 1381
BstMAI GTCTC 5 cut(s) 734, 1076, 1295, 1502, 1690
BstMCI CGRYCG 1 cut(s) 814
BstNI CCWGG 7 cut(s) 200, 319, 375, 558, 1556, 1652, 1886
BstNSI RCATGY 1 cut(s) 1741
BstSCI CCNGG 9 cut(s) 198, 317, 373, 556, 686, 713, 1554, 1650, 1884
BstSFI CTRYAG 3 cut(s) 600, 996, 1574
BstSLI GKGCMC 1 cut(s) 8
BstSNI TACGTA 1 cut(s) 1183
BstUI CGCG 9 cut(s) 84, 213, 573, 616, 810, 1127, 1525, 1643, 1710
BstV1I GCAGC 3 cut(s) 42, 1588, 1846
BstV2I GAAGAC 1 cut(s) 750
BstX2I RGATCY 2 cut(s) 39, 772
BstYI RGATCY 2 cut(s) 39, 772
Bsu36I CCTNAGG 2 cut(s) 1290, 1497
BsuI GTATCC 1 cut(s) 645
BtsCI GGATG 4 cut(s) 1063, 1465, 1666, 1731
BtsI GCAGTG 1 cut(s) 786
BtsIMutI CAGTG 5 cut(s) 243, 496, 786, 885, 1227
BtuMI TCGCGA 1 cut(s) 84
BveI ACCTGC 2 cut(s) 516, 607
Cac8I GCNNGC 5 cut(s) 289, 802, 1624, 1739, 1981
CfoI GCGC 3 cut(s) 215, 588, 1381
CseI GACGC 1 cut(s) 632
Csp6I GTAC 3 cut(s) 314, 1130, 1184
CviAII CATG 4 cut(s) 515, 547, 764, 1738
CviQI GTAC 3 cut(s) 314, 1130, 1184
DinI GGCGCC 1 cut(s) 1380
DraI TTTAAA 1 cut(s) 1719
DrdI GACNNNNNNGTC 1 cut(s) 873
DseDI GACNNNNNNGTC 1 cut(s) 873
EaeI YGGCCR 1 cut(s) 1638
Eam1104I CTCTTC 7 cut(s) 80, 530, 729, 825, 1170, 1293, 1449
EarI CTCTTC 7 cut(s) 80, 530, 729, 825, 1170, 1293, 1449
EciI GGCGGA 1 cut(s) 373
Ecl136II GAGCTC 3 cut(s) 194, 265, 818
Eco105I TACGTA 1 cut(s) 1183
Eco130I CCWWGG 2 cut(s) 422, 668
Eco24I GRGCYC 3 cut(s) 196, 267, 820
Eco47III AGCGCT 1 cut(s) 587
Eco53kI GAGCTC 3 cut(s) 194, 265, 818
Eco57I CTGAAG 2 cut(s) 1317, 1887
Eco72I CACGTG 1 cut(s) 1948
Eco81I CCTNAGG 2 cut(s) 1290, 1497
Eco88I CYCGRG 3 cut(s) 1206, 1656, 1689
EcoICRI GAGCTC 3 cut(s) 194, 265, 818
EcoNI CCTNNNNNAGG 1 cut(s) 905
EcoO109I RGGNCCY 6 cut(s) 505, 1013, 1160, 1235, 1493, 1786
EcoRII CCWGG 7 cut(s) 198, 317, 373, 556, 1554, 1650, 1884
EcoT14I CCWWGG 2 cut(s) 422, 668
EcoT38I GRGCYC 3 cut(s) 196, 267, 820
EgeI GGCGCC 1 cut(s) 1380
EheI GGCGCC 1 cut(s) 1380
ErhI CCWWGG 2 cut(s) 422, 668
FaeI CATG 4 cut(s) 518, 550, 767, 1741
FalI AAGNNNNNCTT 1 cut(s) 1972
FaqI GGGAC 2 cut(s) 518, 1261
FatI CATG 4 cut(s) 514, 546, 763, 1737
FauI CCCGC 6 cut(s) 378, 621, 1238, 1530, 1715, 1734
Fnu4HI GCNGC 8 cut(s) 56, 139, 1092, 1388, 1577, 1641, 1860, 1879
FokI GGATG 4 cut(s) 1070, 1472, 1673, 1718
FriOI GRGCYC 3 cut(s) 196, 267, 820
Fsp4HI GCNGC 8 cut(s) 56, 139, 1092, 1388, 1577, 1641, 1860, 1879
FspBI CTAG 4 cut(s) 647, 669, 950, 1133
GlaI GCGC 3 cut(s) 214, 587, 1380
GluI GCNGC 8 cut(s) 56, 139, 1092, 1388, 1577, 1641, 1860, 1879
GsaI CCCAGC 1 cut(s) 783
GsuI CTGGAG 1 cut(s) 90
HaeII RGCGCY 2 cut(s) 589, 1382
HapII CCGG 4 cut(s) 563, 688, 714, 1187
HgaI GACGC 1 cut(s) 632
HhaI GCGC 3 cut(s) 215, 588, 1381
Hin1I GRCGYC 2 cut(s) 1379, 1630
Hin1II CATG 4 cut(s) 518, 550, 767, 1741
Hin6I GCGC 3 cut(s) 213, 586, 1379
HinP1I GCGC 3 cut(s) 213, 586, 1379
HpaII CCGG 4 cut(s) 563, 688, 714, 1187
HphI GGTGA 2 cut(s) 969, 1159
Hpy166II GTNNAC 2 cut(s) 402, 1345
Hpy188I TCNGA 9 cut(s) 393, 431, 748, 1039, 1054, 1081, 1765, 1867, 1898
Hpy8I GTNNAC 2 cut(s) 402, 1345
Hpy99I CGWCG 5 cut(s) 84, 89, 213, 830, 1632
HpyAV CCTTC 5 cut(s) 43, 639, 903, 1458, 1555
HpyCH4III ACNGT 2 cut(s) 500, 1252
HpyCH4IV ACGT 4 cut(s) 144, 1182, 1630, 1947
HpyCH4V TGCA 9 cut(s) 58, 496, 602, 804, 1009, 1355, 1576, 1829, 1979
HpySE526I ACGT 4 cut(s) 144, 1182, 1630, 1947
Hsp92I GRCGYC 2 cut(s) 1379, 1630
Hsp92II CATG 4 cut(s) 518, 550, 767, 1741
HspAI GCGC 3 cut(s) 213, 586, 1379
KasI GGCGCC 1 cut(s) 1378
Kpn2I TCCGGA 1 cut(s) 562
KpnI GGTACC 1 cut(s) 317
LmnI GCTCC 1 cut(s) 690
Lsp1109I GCAGC 3 cut(s) 42, 1588, 1846
LweI GCATC 2 cut(s) 968, 1651
MaeI CTAG 4 cut(s) 647, 669, 950, 1133
MaeII ACGT 4 cut(s) 144, 1182, 1630, 1947
MaeIII GTNAC 3 cut(s) 257, 975, 1438
MfeI CAATTG 2 cut(s) 308, 1634
MflI RGATCY 2 cut(s) 39, 772
MhlI GDGCHC 4 cut(s) 8, 196, 267, 820
Mly113I GGCGCC 1 cut(s) 1379
MlyI GAGTC 4 cut(s) 403, 764, 1040, 1536
MmeI TCCRAC 2 cut(s) 1413, 1788
MroI TCCGGA 1 cut(s) 562
MseI TTAA 1 cut(s) 1718
MslI CAYNNNNRTG 1 cut(s) 1736
MspI CCGG 4 cut(s) 563, 688, 714, 1187
MspR9I CCNGG 9 cut(s) 200, 319, 375, 558, 688, 715, 1556, 1652, 1886
MunI CAATTG 2 cut(s) 308, 1634
Mva1269I GAATGC 2 cut(s) 867, 1822
MvaI CCWGG 7 cut(s) 200, 319, 375, 558, 1556, 1652, 1886
MvnI CGCG 9 cut(s) 84, 213, 573, 616, 810, 1127, 1525, 1643, 1710
NarI GGCGCC 1 cut(s) 1379
NciI CCSGG 2 cut(s) 688, 715
NlaIII CATG 4 cut(s) 518, 550, 767, 1741
NlaIV GGNNCC 9 cut(s) 41, 102, 315, 506, 784, 916, 1236, 1380, 1494
NmuCI GTSAC 1 cut(s) 975
NruI TCGCGA 1 cut(s) 84
NspI RCATGY 1 cut(s) 1741
PaeI GCATGC 1 cut(s) 1741
PaeR7I CTCGAG 2 cut(s) 1206, 1689
PcsI WCGNNNNNNNCGW 2 cut(s) 525, 640
PctI GAATGC 2 cut(s) 867, 1822
PfeI GAWTC 8 cut(s) 113, 332, 415, 577, 1120, 1138, 1283, 1410
PkrI GCNGC 8 cut(s) 57, 140, 1093, 1389, 1578, 1642, 1861, 1880
PleI GAGTC 4 cut(s) 402, 763, 1040, 1535
PluTI GGCGCC 1 cut(s) 1382
PmaCI CACGTG 1 cut(s) 1948
PmlI CACGTG 1 cut(s) 1948
PpsI GAGTC 4 cut(s) 402, 763, 1040, 1535
Ppu21I YACGTR 2 cut(s) 1183, 1948
PpuMI RGGWCCY 5 cut(s) 505, 1013, 1235, 1493, 1786
PsiI TTATAA 1 cut(s) 1028
Psp124BI GAGCTC 3 cut(s) 196, 267, 820
Psp5II RGGWCCY 5 cut(s) 505, 1013, 1235, 1493, 1786
Psp6I CCWGG 7 cut(s) 198, 317, 373, 556, 1554, 1650, 1884
PspCI CACGTG 1 cut(s) 1948
PspFI CCCAGC 1 cut(s) 779
PspGI CCWGG 7 cut(s) 198, 317, 373, 556, 1554, 1650, 1884
PspN4I GGNNCC 9 cut(s) 41, 102, 315, 506, 784, 916, 1236, 1380, 1494
PspPPI RGGWCCY 5 cut(s) 505, 1013, 1235, 1493, 1786
PstI CTGCAG 2 cut(s) 604, 1578
PsuI RGATCY 2 cut(s) 39, 772
RruI TCGCGA 1 cut(s) 84
RsaI GTAC 3 cut(s) 315, 1131, 1185
RsaNI GTAC 3 cut(s) 314, 1130, 1184
RseI CAYNNNNRTG 1 cut(s) 1736
SacI GAGCTC 3 cut(s) 196, 267, 820
SaqAI TTAA 1 cut(s) 1718
SatI GCNGC 8 cut(s) 56, 139, 1092, 1388, 1577, 1641, 1860, 1879
SchI GAGTC 4 cut(s) 403, 764, 1040, 1536
ScrFI CCNGG 9 cut(s) 200, 319, 375, 558, 688, 715, 1556, 1652, 1886
SduI GDGCHC 4 cut(s) 8, 196, 267, 820
SfaNI GCATC 2 cut(s) 968, 1651
SfcI CTRYAG 3 cut(s) 600, 996, 1574
SfiI GGCCNNNNNGGCC 1 cut(s) 1913
SfoI GGCGCC 1 cut(s) 1380
Sfr274I CTCGAG 2 cut(s) 1206, 1689
SlaI CTCGAG 2 cut(s) 1206, 1689
SmiMI CAYNNNNRTG 1 cut(s) 1736
SmlI CTYRAG 4 cut(s) 581, 1206, 1665, 1689
SmoI CTYRAG 4 cut(s) 581, 1206, 1665, 1689
SnaBI TACGTA 1 cut(s) 1183
SphI GCATGC 1 cut(s) 1741
SspDI GGCGCC 1 cut(s) 1378
SspMI CTAG 4 cut(s) 647, 669, 950, 1133
SstI GAGCTC 3 cut(s) 196, 267, 820
StyD4I CCNGG 9 cut(s) 198, 317, 373, 556, 686, 713, 1554, 1650, 1884
StyI CCWWGG 2 cut(s) 422, 668
TaaI ACNGT 2 cut(s) 500, 1252
TaiI ACGT 4 cut(s) 147, 1185, 1633, 1950
TaqI TCGA 7 cut(s) 456, 828, 1207, 1413, 1690, 1782, 1845
TaqII GACCGA 1 cut(s) 828
TauI GCSGC 5 cut(s) 141, 1094, 1390, 1643, 1881
TfiI GAWTC 8 cut(s) 113, 332, 415, 577, 1120, 1138, 1283, 1410
Tru1I TTAA 1 cut(s) 1718
Tru9I TTAA 1 cut(s) 1718
TscAI CASTG 5 cut(s) 250, 503, 793, 892, 1234
TseFI GTSAC 1 cut(s) 975
TseI GCWGC 3 cut(s) 55, 1576, 1859
Tsp45I GTSAC 1 cut(s) 975
TspDTI ATGAA 5 cut(s) 783, 1074, 1338, 1623, 1737
TspGWI ACGGA 2 cut(s) 68, 863
TspRI CASTG 5 cut(s) 250, 503, 793, 892, 1234
XagI CCTNNNNNAGG 1 cut(s) 905
XceI RCATGY 1 cut(s) 1741
XcmI CCANNNNNNNNNTGG 1 cut(s) 223
XhoI CTCGAG 2 cut(s) 1206, 1689
XmaJI CCTAGG 1 cut(s) 668
XspI CTAG 4 cut(s) 647, 669, 950, 1133
ZraI GACGTC 1 cut(s) 1631
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.