Rmu_sc0005325.1_g000006

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005325.1
OG0000214
Physical Location & Seq
Forward (+)
15085 .. 17618
2534 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005325.1_g000006.1.cds

Sequence Viewer

Length: 2055 bp
atgtgcccatttgatactgacattagtggccccttctggatccttgccttttggctgaagatttatttcactctcttccgtcgcggcgatattccaaaggaacctccagttgattcccttttggggaactggctttgccgcaacgtaaggtatcgagctccaccctactctgagtgttttatttacttgtacttgctgggagagatgccggacccaaaaatattcctttttaggcgattccctcctcccctcgataatggctttctgcccaatggacggatcatagtgaaagagccctcctggcctttcgtcgcgccatctcctgcttggatattctgggtaccctggcctctggttgattctgccaattattacacctcctggcggagattagccccacctgggtctgccccctttcagagtcagtttactttgatagtgattcccccttgggacctgccacatgacgaactcttcgtcctgatctttcgtggcataagtagtcctggtccggaggaccgcgagattcttgagcgcttctccaaccctgcagtacaaaccccgcgacctattcttccttctcgcttatcacgtccaaggatacaaatccataagcctagggaaacacaaaccacccggagcaagacaaactctgttcaggccgaggaacaaagggcaatagtagaggagactcctgatgtagagtcttctcatgatgaagatcctgctgaggccactgctgtctttgcttgcaaacgcaataggtctcaatccgtcgaagagagttttgaagatgacgaacctctgggaatgcgattggtccgtcaaaggaccactgatccctcttgcctgagcgaggctggatcctcagccgctgtagaaaagtcaactctctcgctagttcaagcatcaactaatcccgtggcgcctcttccatctcccagatctacagagcatctgcaaggtcctaccattctaataacgatctccgatgacaactccttagagcatgaaagagtggaaagccactctgagacttctgccgcttatgaggaactgatgacgacagagattctagcggcactagaggtccaagagctaaatgaggtgaggcctcttcctcttggtgaccacataccatatattgaccctacagctcgaaaggaggtggcaacaaacactgagggtcctattggagggacagtcgccccagagatggaaaatgatactgacggtggtggttccccccaagtcttgcgaataaatgagacaaccgtcaaagccgagggccttgtgcttgaatctgctccacttgcccatggtcagccgcgagttgagtttccagattctcctgtggctgaagggatagaccaacctaatgaagatgaagaaactgaggaagctgtccacccttttgcattggtggttcgtgatcctgtggcgcctctgccacctcctcctcctaccagattcgagagattgatgagggtgttggaggtaactcctccttctgctgtggatgaggctaagatggtgcttcacgaacatctgggccctcaggtattggagactgacatcctcccgcgagtcttggaagctctaaggtatcttcgccaggagaaggttttgactctgtggcaatttagtgctatcgacactctgctgaatgaacttgatatggcccgccgacgtcaatcggcagcgaacacccaggctcgtgacgctcaagaggctttgaatagtgtctctcgagaaatggacatctcctgcgatattttaaatgaacgatccatccgcctgcgggaactacaaatccaaaggtccgacttcaaacttcagatcgaggacctccaagaccatttagcctttgttgagaatgcgattgttgcagaagaagctcaactcgatgagcctttggctgcttctgaagaaatgggccgcaacctggcccgtatcagagatcgggccactcaggctgaaactagtgctattgcagccaaacgccacgtggaggaactttgtttgaaattgagctttgcgggccaatctttgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

684

Amino Acids

76.84

Weight (kDa)

4.78

Isoelectric Point (pI)

60.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000214)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0079611
rosa_multiflora Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha Rh3DG208400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1693
Acc36I ACCTGC 1 cut(s) 465
Acc65I GGTACC 1 cut(s) 340
AccB1I GGYRCC 3 cut(s) 340, 925, 1441
AccII CGCG 6 cut(s) 84, 314, 522, 565, 1330, 1585
AccIII TCCGGA 1 cut(s) 511
AclWI GGATC 9 cut(s) 34, 47, 287, 716, 833, 858, 871, 1427, 1782
AcuI CTGAAG 4 cut(s) 77, 1380, 1820, 1947
AcvI CACGTG 1 cut(s) 2008
AcyI GRCGYC 3 cut(s) 926, 1442, 1690
AfaI GTAC 3 cut(s) 191, 342, 555
AfeI AGCGCT 1 cut(s) 536
AgsI TTSAA 6 cut(s) 791, 905, 1301, 1738, 1831, 2026
AhlI ACTAGT 1 cut(s) 1982
AjiI CACGTC 1 cut(s) 593
AjnI CCWGG 8 cut(s) 299, 344, 380, 400, 505, 1614, 1710, 1944
AloI GAACNNNNNNTCC 6 cut(s) 462, 494, 1776, 1797, 1808, 1829
AluBI AGCT 7 cut(s) 158, 1099, 1157, 1403, 1598, 1898, 2034
AluI AGCT 7 cut(s) 158, 1099, 1157, 1403, 1598, 1898, 2034
Alw21I GWGCWC 1 cut(s) 160
Alw26I GTCTC 6 cut(s) 683, 771, 1028, 1262, 1562, 1750
AlwI GGATC 9 cut(s) 34, 47, 287, 716, 833, 858, 871, 1427, 1782
AlwNI CAGNNNCTG 1 cut(s) 875
Ama87I CYCGRG 1 cut(s) 1749
Aor13HI TCCGGA 1 cut(s) 511
Aor51HI AGCGCT 1 cut(s) 536
ApaI GGGCCC 1 cut(s) 1556
ApeKI GCWGC 3 cut(s) 1700, 1919, 1994
ArsI GACNNNNNNTTYG 4 cut(s) 458, 462, 490, 494
Asp718I GGTACC 1 cut(s) 340
AspA2I CCTAGG 1 cut(s) 617
AspLEI GCGC 4 cut(s) 316, 537, 928, 1444
AsuC2I CCSGG 1 cut(s) 637
AsuHPI GGTGA 2 cut(s) 1120, 1139
AvaI CYCGRG 1 cut(s) 1749
AvrII CCTAGG 1 cut(s) 617
AxyI CCTNAGG 1 cut(s) 1557
BaeGI GKGCMC 2 cut(s) 8, 1556
BamHI GGATCC 2 cut(s) 39, 863
BanI GGYRCC 3 cut(s) 340, 925, 1441
BanII GRGCYC 3 cut(s) 160, 297, 1556
BauI CACGAG 1 cut(s) 1716
BbrPI CACGTG 1 cut(s) 2008
BbsI GAAGAC 1 cut(s) 699
Bbv12I GWGCWC 1 cut(s) 160
BbvCI CCTCAGC 2 cut(s) 729, 868
BbvI GCAGC 3 cut(s) 1712, 1906, 2006
BccI CCATC 5 cut(s) 325, 943, 1210, 1525, 1799
BciT130I CCWGG 8 cut(s) 301, 346, 382, 402, 507, 1616, 1712, 1946
BciVI GTATCC 1 cut(s) 594
BcnI CCSGG 1 cut(s) 637
BcoDI GTCTC 6 cut(s) 683, 771, 1028, 1262, 1562, 1750
BcuI ACTAGT 1 cut(s) 1982
BfaI CTAG 5 cut(s) 618, 899, 1076, 1085, 1983
BfmI CTRYAG 4 cut(s) 549, 876, 948, 1152
BfoI RGCGCY 3 cut(s) 538, 929, 1445
BfuAI ACCTGC 1 cut(s) 465
BfuI GTATCC 1 cut(s) 594
BglI GCCNNNNNGGC 2 cut(s) 301, 1973
BglII AGATCT 1 cut(s) 944
BlnI CCTAGG 1 cut(s) 617
Bme1390I CCNGG 9 cut(s) 301, 346, 382, 402, 507, 637, 1616, 1712, 1946
BmeT110I CYCGRG 1 cut(s) 1749
BmgBI CACGTC 1 cut(s) 593
BmrFI CCNGG 9 cut(s) 301, 346, 382, 402, 507, 637, 1616, 1712, 1946
BmsI GCATC 3 cut(s) 195, 917, 964
BoxI GACNNNNGTC 1 cut(s) 1274
BpiI GAAGAC 1 cut(s) 699
BplI GAGNNNNNCTC 2 cut(s) 524, 556
BpmI CTGGAG 1 cut(s) 90
Bpu10I CCTNAGC 3 cut(s) 729, 851, 868
BpuEI CTTGAG 2 cut(s) 551, 1710
BpuMI CCSGG 1 cut(s) 637
BsaAI YACGTR 1 cut(s) 2008
BsaBI GATNNNNATC 2 cut(s) 605, 720
BsaHI GRCGYC 3 cut(s) 926, 1442, 1690
BsaI GGTCTC 1 cut(s) 771
BsaWI WCCGGW 1 cut(s) 511
BsaXI ACNNNNNCTCC 2 cut(s) 1188, 1218
Bse1I ACTGG 2 cut(s) 107, 134
Bse21I CCTNAGG 1 cut(s) 1557
Bse8I GATNNNNATC 2 cut(s) 605, 720
BseAI TCCGGA 1 cut(s) 511
BseBI CCWGG 8 cut(s) 301, 346, 382, 402, 507, 1616, 1712, 1946
BseGI GGATG 3 cut(s) 1525, 1575, 1791
BseJI GATNNNNATC 2 cut(s) 605, 720
BseMII CTCAG 9 cut(s) 162, 720, 842, 882, 1023, 1173, 1386, 1571, 1985
BseNI ACTGG 2 cut(s) 107, 134
BseRI GAGGAG 5 cut(s) 234, 701, 1446, 1449, 1494
BseSI GKGCMC 2 cut(s) 8, 1556
BseXI GCAGC 3 cut(s) 1712, 1906, 2006
BseYI CCCAGC 1 cut(s) 196
Bsh1236I CGCG 6 cut(s) 84, 314, 522, 565, 1330, 1585
BshNI GGYRCC 3 cut(s) 340, 925, 1441
BsiHKAI GWGCWC 1 cut(s) 160
BsiHKCI CYCGRG 1 cut(s) 1749
BsiSI CCGG 3 cut(s) 209, 512, 637
BslFI GGGAC 2 cut(s) 467, 1213
BsmAI GTCTC 6 cut(s) 683, 771, 1028, 1262, 1562, 1750
BsmFI GGGAC 2 cut(s) 467, 1213
BsmI GAATGC 2 cut(s) 816, 1882
Bso31I GGTCTC 1 cut(s) 771
BsoBI CYCGRG 1 cut(s) 1749
Bsp120I GGGCCC 1 cut(s) 1552
Bsp1286I GDGCHC 4 cut(s) 8, 160, 297, 1556
Bsp13I TCCGGA 1 cut(s) 511
Bsp19I CCATGG 1 cut(s) 1318
BspCNI CTCAG 9 cut(s) 163, 721, 843, 881, 1024, 1174, 1387, 1570, 1984
BspEI TCCGGA 1 cut(s) 511
BspFNI CGCG 6 cut(s) 84, 314, 522, 565, 1330, 1585
BspHI TCATGA 1 cut(s) 712
BspMAI CTGCAG 1 cut(s) 553
BspMI ACCTGC 1 cut(s) 465
BspPI GGATC 9 cut(s) 34, 47, 287, 716, 833, 858, 871, 1427, 1782
BspT107I GGYRCC 3 cut(s) 340, 925, 1441
BspTNI GGTCTC 1 cut(s) 771
BsrI ACTGG 2 cut(s) 107, 134
BssNI GRCGYC 3 cut(s) 926, 1442, 1690
BssSI CACGAG 1 cut(s) 1716
BssT1I CCWWGG 4 cut(s) 449, 596, 617, 1318
Bst2BI CACGAG 1 cut(s) 1716
Bst2UI CCWGG 8 cut(s) 301, 346, 382, 402, 507, 1616, 1712, 1946
Bst4CI ACNGT 3 cut(s) 1204, 1235, 1276
Bst6I CTCTTC 5 cut(s) 80, 479, 774, 936, 1122
BstACI GRCGYC 3 cut(s) 926, 1442, 1690
BstBAI YACGTR 1 cut(s) 2008
BstC8I GCNNGC 4 cut(s) 751, 1684, 1799, 2041
BstDSI CCRYGG 2 cut(s) 921, 1318
BstEII GGTNACC 1 cut(s) 1127
BstENI CCTNNNNNAGG 2 cut(s) 854, 1194
BstF5I GGATG 3 cut(s) 1525, 1575, 1791
BstFNI CGCG 6 cut(s) 84, 314, 522, 565, 1330, 1585
BstH2I RGCGCY 3 cut(s) 538, 929, 1445
BstHHI GCGC 4 cut(s) 316, 537, 928, 1444
BstMAI GTCTC 6 cut(s) 683, 771, 1028, 1262, 1562, 1750
BstNI CCWGG 8 cut(s) 301, 346, 382, 402, 507, 1616, 1712, 1946
BstPAI GACNNNNGTC 1 cut(s) 1274
BstPI GGTNACC 1 cut(s) 1127
BstSCI CCNGG 9 cut(s) 299, 344, 380, 400, 505, 635, 1614, 1710, 1944
BstSFI CTRYAG 4 cut(s) 549, 876, 948, 1152
BstSLI GKGCMC 2 cut(s) 8, 1556
BstUI CGCG 6 cut(s) 84, 314, 522, 565, 1330, 1585
BstV1I GCAGC 3 cut(s) 1712, 1906, 2006
BstV2I GAAGAC 1 cut(s) 699
BstX2I RGATCY 4 cut(s) 39, 721, 863, 944
BstYI RGATCY 4 cut(s) 39, 721, 863, 944
Bsu36I CCTNAGG 1 cut(s) 1557
BsuI GTATCC 1 cut(s) 594
BtgI CCRYGG 2 cut(s) 921, 1318
BtrI CACGTC 1 cut(s) 593
BtsCI GGATG 3 cut(s) 1525, 1575, 1791
BtsI GCAGTG 1 cut(s) 735
BtsIMutI CAGTG 3 cut(s) 735, 834, 1179
BveI ACCTGC 1 cut(s) 465
Cac8I GCNNGC 4 cut(s) 751, 1684, 1799, 2041
CaiI CAGNNNCTG 1 cut(s) 875
CciI TCATGA 1 cut(s) 712
CfoI GCGC 4 cut(s) 316, 537, 928, 1444
CseI GACGC 1 cut(s) 1730
Csp6I GTAC 3 cut(s) 190, 341, 554
CviAII CATG 4 cut(s) 464, 713, 1010, 1319
CviQI GTAC 3 cut(s) 190, 341, 554
DinI GGCGCC 2 cut(s) 927, 1443
DraI TTTAAA 1 cut(s) 1779
Eam1104I CTCTTC 5 cut(s) 80, 479, 774, 936, 1122
EarI CTCTTC 5 cut(s) 80, 479, 774, 936, 1122
EciI GGCGGA 2 cut(s) 400, 1784
Ecl136II GAGCTC 1 cut(s) 158
Eco130I CCWWGG 4 cut(s) 449, 596, 617, 1318
Eco147I AGGCCT 1 cut(s) 1114
Eco24I GRGCYC 3 cut(s) 160, 297, 1556
Eco31I GGTCTC 1 cut(s) 771
Eco47III AGCGCT 1 cut(s) 536
Eco53kI GAGCTC 1 cut(s) 158
Eco57I CTGAAG 4 cut(s) 77, 1380, 1820, 1947
Eco72I CACGTG 1 cut(s) 2008
Eco81I CCTNAGG 1 cut(s) 1557
Eco88I CYCGRG 1 cut(s) 1749
Eco91I GGTNACC 1 cut(s) 1127
EcoICRI GAGCTC 1 cut(s) 158
EcoNI CCTNNNNNAGG 2 cut(s) 854, 1194
EcoO109I RGGNCCY 6 cut(s) 454, 965, 1187, 1288, 1553, 1846
EcoO65I GGTNACC 1 cut(s) 1127
EcoRII CCWGG 8 cut(s) 299, 344, 380, 400, 505, 1614, 1710, 1944
EcoT14I CCWWGG 4 cut(s) 449, 596, 617, 1318
EcoT38I GRGCYC 3 cut(s) 160, 297, 1556
EgeI GGCGCC 2 cut(s) 927, 1443
EheI GGCGCC 2 cut(s) 927, 1443
ErhI CCWWGG 4 cut(s) 449, 596, 617, 1318
FaeI CATG 4 cut(s) 467, 716, 1013, 1322
FaqI GGGAC 2 cut(s) 467, 1213
FatI CATG 4 cut(s) 463, 712, 1009, 1318
FauI CCCGC 5 cut(s) 570, 1590, 1691, 1794, 2032
FokI GGATG 3 cut(s) 1532, 1562, 1778
FriOI GRGCYC 3 cut(s) 160, 297, 1556
FspBI CTAG 5 cut(s) 618, 899, 1076, 1085, 1983
GlaI GCGC 4 cut(s) 315, 536, 927, 1443
GsaI CCCAGC 1 cut(s) 200
GsuI CTGGAG 1 cut(s) 90
HaeII RGCGCY 3 cut(s) 538, 929, 1445
HapII CCGG 3 cut(s) 209, 512, 637
HgaI GACGC 1 cut(s) 1730
HhaI GCGC 4 cut(s) 316, 537, 928, 1444
Hin1I GRCGYC 3 cut(s) 926, 1442, 1690
Hin1II CATG 4 cut(s) 467, 716, 1013, 1322
Hin6I GCGC 4 cut(s) 314, 535, 926, 1442
HinP1I GCGC 4 cut(s) 314, 535, 926, 1442
HincII GTYRAC 1 cut(s) 888
HindII GTYRAC 1 cut(s) 888
HpaII CCGG 3 cut(s) 209, 512, 637
HphI GGTGA 2 cut(s) 1120, 1139
Hpy166II GTNNAC 3 cut(s) 429, 888, 1408
Hpy188I TCNGA 8 cut(s) 172, 420, 991, 1033, 1825, 1839, 1927, 1958
Hpy8I GTNNAC 3 cut(s) 429, 888, 1408
Hpy99I CGWCG 4 cut(s) 84, 314, 779, 1692
HpyAV CCTTC 5 cut(s) 43, 588, 1355, 1518, 1615
HpyCH4III ACNGT 3 cut(s) 1204, 1235, 1276
HpyCH4IV ACGT 4 cut(s) 144, 592, 1690, 2007
HpyCH4V TGCA 6 cut(s) 551, 753, 961, 1418, 1889, 1994
HpySE526I ACGT 4 cut(s) 144, 592, 1690, 2007
Hsp92I GRCGYC 3 cut(s) 926, 1442, 1690
Hsp92II CATG 4 cut(s) 467, 716, 1013, 1322
HspAI GCGC 4 cut(s) 314, 535, 926, 1442
KasI GGCGCC 2 cut(s) 925, 1441
Kpn2I TCCGGA 1 cut(s) 511
KpnI GGTACC 1 cut(s) 344
LmnI GCTCC 3 cut(s) 163, 639, 1312
Lsp1109I GCAGC 3 cut(s) 1712, 1906, 2006
LweI GCATC 3 cut(s) 195, 917, 964
MaeI CTAG 5 cut(s) 618, 899, 1076, 1085, 1983
MaeII ACGT 4 cut(s) 144, 592, 1690, 2007
MaeIII GTNAC 3 cut(s) 1127, 1498, 1718
MflI RGATCY 4 cut(s) 39, 721, 863, 944
MhlI GDGCHC 4 cut(s) 8, 160, 297, 1556
MluCI AATT 3 cut(s) 367, 1640, 2027
Mly113I GGCGCC 2 cut(s) 926, 1442
MlyI GAGTC 5 cut(s) 430, 685, 713, 1596, 1624
MmeI TCCRAC 3 cut(s) 567, 1473, 1848
MroI TCCGGA 1 cut(s) 511
MseI TTAA 1 cut(s) 1778
MspA1I CMGCKG 1 cut(s) 875
MspI CCGG 3 cut(s) 209, 512, 637
MspR9I CCNGG 9 cut(s) 301, 346, 382, 402, 507, 637, 1616, 1712, 1946
Mva1269I GAATGC 2 cut(s) 816, 1882
MvaI CCWGG 8 cut(s) 301, 346, 382, 402, 507, 1616, 1712, 1946
MvnI CGCG 6 cut(s) 84, 314, 522, 565, 1330, 1585
NarI GGCGCC 2 cut(s) 926, 1442
NciI CCSGG 1 cut(s) 637
NcoI CCATGG 1 cut(s) 1318
NlaIII CATG 4 cut(s) 467, 716, 1013, 1322
NmeAIII GCCGAG 2 cut(s) 688, 1309
NmuCI GTSAC 2 cut(s) 1127, 1718
PaeR7I CTCGAG 1 cut(s) 1749
PagI TCATGA 1 cut(s) 712
PceI AGGCCT 1 cut(s) 1114
PcsI WCGNNNNNNNCGW 2 cut(s) 474, 589
PctI GAATGC 2 cut(s) 816, 1882
PfeI GAWTC 9 cut(s) 113, 237, 359, 442, 526, 1072, 1301, 1346, 1470
PleI GAGTC 5 cut(s) 429, 685, 712, 1595, 1624
PluTI GGCGCC 2 cut(s) 929, 1445
PmaCI CACGTG 1 cut(s) 2008
PmlI CACGTG 1 cut(s) 2008
PpsI GAGTC 5 cut(s) 429, 685, 712, 1595, 1624
Ppu21I YACGTR 1 cut(s) 2008
PpuMI RGGWCCY 4 cut(s) 454, 965, 1187, 1846
PshAI GACNNNNGTC 1 cut(s) 1274
Psp124BI GAGCTC 1 cut(s) 160
Psp5II RGGWCCY 4 cut(s) 454, 965, 1187, 1846
Psp6I CCWGG 8 cut(s) 299, 344, 380, 400, 505, 1614, 1710, 1944
PspCI CACGTG 1 cut(s) 2008
PspEI GGTNACC 1 cut(s) 1127
PspFI CCCAGC 1 cut(s) 196
PspGI CCWGG 8 cut(s) 299, 344, 380, 400, 505, 1614, 1710, 1944
PspOMI GGGCCC 1 cut(s) 1552
PspPPI RGGWCCY 4 cut(s) 454, 965, 1187, 1846
PstI CTGCAG 1 cut(s) 553
PstNI CAGNNNCTG 1 cut(s) 875
PsuI RGATCY 4 cut(s) 39, 721, 863, 944
RsaI GTAC 3 cut(s) 191, 342, 555
RsaNI GTAC 3 cut(s) 190, 341, 554
SacI GAGCTC 1 cut(s) 160
SaqAI TTAA 1 cut(s) 1778
SchI GAGTC 5 cut(s) 430, 685, 713, 1596, 1624
ScrFI CCNGG 9 cut(s) 301, 346, 382, 402, 507, 637, 1616, 1712, 1946
SduI GDGCHC 4 cut(s) 8, 160, 297, 1556
SfaNI GCATC 3 cut(s) 195, 917, 964
SfcI CTRYAG 4 cut(s) 549, 876, 948, 1152
SfoI GGCGCC 2 cut(s) 927, 1443
Sfr274I CTCGAG 1 cut(s) 1749
SlaI CTCGAG 1 cut(s) 1749
SmlI CTYRAG 3 cut(s) 530, 1725, 1749
SmoI CTYRAG 3 cut(s) 530, 1725, 1749
SpeI ACTAGT 1 cut(s) 1982
Sse9I AATT 3 cut(s) 367, 1640, 2027
SseBI AGGCCT 1 cut(s) 1114
SspDI GGCGCC 2 cut(s) 925, 1441
SspI AATATT 1 cut(s) 222
SspMI CTAG 5 cut(s) 618, 899, 1076, 1085, 1983
SstI GAGCTC 1 cut(s) 160
StuI AGGCCT 1 cut(s) 1114
StyD4I CCNGG 9 cut(s) 299, 344, 380, 400, 505, 635, 1614, 1710, 1944
StyI CCWWGG 4 cut(s) 449, 596, 617, 1318
TaaI ACNGT 3 cut(s) 1204, 1235, 1276
TaiI ACGT 4 cut(s) 147, 595, 1693, 2010
TaqI TCGA 9 cut(s) 154, 252, 777, 1159, 1473, 1653, 1750, 1842, 1905
TasI AATT 3 cut(s) 367, 1640, 2027
TatI WGTACW 2 cut(s) 189, 553
TauI GCSGC 7 cut(s) 87, 141, 875, 1046, 1082, 1330, 1941
TfiI GAWTC 9 cut(s) 113, 237, 359, 442, 526, 1072, 1301, 1346, 1470
Tru1I TTAA 1 cut(s) 1778
Tru9I TTAA 1 cut(s) 1778
TscAI CASTG 3 cut(s) 742, 841, 1186
TseFI GTSAC 2 cut(s) 1127, 1718
TseI GCWGC 3 cut(s) 1700, 1919, 1994
Tsp45I GTSAC 2 cut(s) 1127, 1718
TspDTI ATGAA 6 cut(s) 732, 1026, 1395, 1401, 1683, 1797
TspGWI ACGGA 4 cut(s) 68, 292, 763, 812
TspRI CASTG 3 cut(s) 742, 841, 1186
XagI CCTNNNNNAGG 2 cut(s) 854, 1194
XcmI CCANNNNNNNNNTGG 2 cut(s) 324, 2005
XhoI CTCGAG 1 cut(s) 1749
XmaJI CCTAGG 1 cut(s) 617
XspI CTAG 5 cut(s) 618, 899, 1076, 1085, 1983
ZraI GACGTC 1 cut(s) 1691
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.