Rmu_sc0005325.1_g000004

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005325.1
OG0000214
Physical Location & Seq
Reverse (-)
9676 .. 12042
2367 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005325.1_g000004.1.cds

Sequence Viewer

Length: 1452 bp
atgagcataactctgctagatgttcttaccatcacggggttgcccattgactttgacccctatgtgcatggtcagtttgatggcattcaatttcctttgagcatggatatagctggttgggggcatcacagcaaatcctacccattctggcgcgactattactgcacccagcgtgaccacacaagaggtatctcattcctggaattctggttttgcaaatttatcttttgcacttgttccaacaaacctactgggccctggaattttctggccactgctctctacaatggtatttgcattggccttgggcaacctgtattaggcgcgttatatcgctccctttataaagccgtaatgtgccccttcgatactgacattagtggccctttctggatcctcgccttttggctgcagatttatttccctcacttccatcacggtgatattccaaaggatcctctagcaaattcccttacggggaattggttttgccgcaacttaagtggacgggatcatagcgaaagagccctcctggcctttcatcgcgccatatcctgcttggatattcgtcttgccaccgaccgcataagctacgagctttatgcccctaaccactttgctcgccaatttgggttggcccagtgggtaccctggcctctggttgattctgccaattactacacctcttggatgaggttagccccgcctggggtcagaacgctgtaccccctcaacgatgtcgacgatgattatgttgattggtggaaagaagtgtccgtgaactgttgggacctgccatatgacgaactcttcgccctgatcttttgtggcatgagtagtcctagtctggaggacctcgagattcttgagcgcttctccaaccctgcagcacaacccccgcgacctattctaccttctcgctcatcacgtccagggataaaaatccacgagcctggggcaacagtctggaaacaaaaggtaatagcagaggagactcctgagggtgagtcttctcatgatgaagatcccgctgaggatgatgactccccgaagcatgaaagcgtggaaaatgaggcttctgccacttatgaggaactaatgacgacagagattcctgtagcactagaggtccaagaggtgaatgaagtggggcctcttcctcttggtgaccatgtaccagatatcgacccgacagctcgagaggaggtggtccttgatgccgaagctctggccggcaggacgtacatcccagagtctcccgcggctgagatgttggaccaagctcaggggatcgttgagggaaattatgctgaagatgaaataattgaggaaccaatcgaccttctagcattggtgacttatgatcgttctgtgaatcctccacctcctcctcccactaggcttgaaaagctagctcaaatccttgaggaaactcctcctaccgctgcttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

483

Amino Acids

54.53

Weight (kDa)

4.49

Isoelectric Point (pI)

46.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000214)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0079611
rosa_multiflora Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha Rh3DG208400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 345
Acc36I ACCTGC 1 cut(s) 801
Acc65I GGTACC 1 cut(s) 646
AccB1I GGYRCC 1 cut(s) 646
AccI GTMKAC 1 cut(s) 741
AccII CGCG 5 cut(s) 153, 326, 546, 901, 1262
AciI CCGC 8 cut(s) 493, 583, 704, 899, 1029, 1260, 1262, 1443
AclWI GGATC 7 cut(s) 388, 401, 449, 462, 519, 1019, 1298
AcoI YGGCCR 2 cut(s) 270, 1230
AcsI RAATTY 4 cut(s) 203, 218, 262, 466
AcuI CTGAAG 1 cut(s) 1332
AfaI GTAC 4 cut(s) 648, 725, 1176, 1244
AfeI AGCGCT 1 cut(s) 872
AfiI CCNNNNNNNGG 6 cut(s) 36, 320, 477, 708, 709, 1285
AflII CTTAAG 1 cut(s) 499
AgsI TTSAA 2 cut(s) 89, 1406
AjiI CACGTC 1 cut(s) 929
AjnI CCWGG 7 cut(s) 198, 257, 531, 650, 706, 931, 952
AluBI AGCT 8 cut(s) 113, 591, 598, 1196, 1226, 1283, 1411, 1415
AluI AGCT 8 cut(s) 113, 591, 598, 1196, 1226, 1283, 1411, 1415
Alw26I GTCTC 2 cut(s) 986, 1260
AlwI GGATC 7 cut(s) 388, 401, 449, 462, 519, 1019, 1298
Ama87I CYCGRG 2 cut(s) 857, 1197
Aor51HI AGCGCT 1 cut(s) 872
AoxI GGCC 9 cut(s) 254, 270, 301, 382, 534, 636, 653, 1151, 1230
ApaI GGGCCC 1 cut(s) 258
ApeKI GCWGC 3 cut(s) 409, 887, 1445
ApoI RAATTY 4 cut(s) 203, 218, 262, 466
ArsI GACNNNNNNTTYG 2 cut(s) 794, 826
Asp718I GGTACC 1 cut(s) 646
AspLEI GCGC 4 cut(s) 153, 326, 548, 873
AsuHPI GGTGA 5 cut(s) 452, 1016, 1150, 1178, 1366
AsuNHI GCTAGC 1 cut(s) 1411
AvaI CYCGRG 2 cut(s) 857, 1197
AvaII GGWCC 5 cut(s) 790, 853, 1129, 1210, 1276
AxyI CCTNAGG 1 cut(s) 999
BaeGI GKGCMC 2 cut(s) 258, 362
BalI TGGCCA 1 cut(s) 272
BamHI GGATCC 2 cut(s) 393, 454
BanI GGYRCC 1 cut(s) 646
BanII GRGCYC 2 cut(s) 258, 529
BauI CACGAG 1 cut(s) 947
BbsI GAAGAC 1 cut(s) 1002
BbvCI CCTCAGC 1 cut(s) 1032
BbvI GCAGC 3 cut(s) 396, 899, 1432
BccI CCATC 3 cut(s) 38, 74, 441
BceAI ACGGC 1 cut(s) 335
BcgI CGANNNNNNTGC 2 cut(s) 584, 618
BciT130I CCWGG 7 cut(s) 200, 259, 533, 652, 708, 933, 954
BcoDI GTCTC 2 cut(s) 986, 1260
BfaI CTAG 7 cut(s) 17, 461, 843, 1124, 1346, 1398, 1412
BfmI CTRYAG 3 cut(s) 410, 885, 1116
BfoI RGCGCY 1 cut(s) 874
BfrI CTTAAG 1 cut(s) 499
BfuAI ACCTGC 1 cut(s) 801
BglI GCCNNNNNGGC 1 cut(s) 533
BisI GCNGC 5 cut(s) 410, 493, 888, 1263, 1446
BlsI GCNGC 5 cut(s) 411, 494, 889, 1264, 1447
Bme1390I CCNGG 7 cut(s) 200, 259, 533, 652, 708, 933, 954
Bme18I GGWCC 5 cut(s) 790, 853, 1129, 1210, 1276
BmeT110I CYCGRG 2 cut(s) 857, 1197
BmgBI CACGTC 1 cut(s) 929
BmiI GGNNCC 7 cut(s) 256, 395, 456, 648, 791, 1152, 1332
BmrFI CCNGG 7 cut(s) 200, 259, 533, 652, 708, 933, 954
BmrI ACTGGG 2 cut(s) 261, 634
BmsI GCATC 2 cut(s) 133, 1207
BmtI GCTAGC 1 cut(s) 1415
BmuI ACTGGG 2 cut(s) 261, 634
BpiI GAAGAC 1 cut(s) 1002
BplI GAGNNNNNCTC 3 cut(s) 27, 860, 892
BpmI CTGGAG 1 cut(s) 869
Bpu10I CCTNAGC 2 cut(s) 1032, 1284
BpuEI CTTGAG 2 cut(s) 887, 1445
BsaBI GATNNNNATC 2 cut(s) 941, 1023
BsaJI CCNNGG 7 cut(s) 257, 304, 650, 707, 932, 953, 1260
Bsc4I CCNNNNNNNGG 6 cut(s) 36, 320, 477, 708, 709, 1285
Bse118I RCCGGY 1 cut(s) 1232
Bse1I ACTGG 2 cut(s) 256, 640
Bse21I CCTNAGG 1 cut(s) 999
Bse8I GATNNNNATC 2 cut(s) 941, 1023
BseBI CCWGG 7 cut(s) 200, 259, 533, 652, 708, 933, 954
BseDI CCNNGG 7 cut(s) 257, 304, 650, 707, 932, 953, 1260
BseGI GGATG 3 cut(s) 696, 1042, 1245
BseJI GATNNNNATC 2 cut(s) 941, 1023
BseLI CCNNNNNNNGG 6 cut(s) 36, 320, 477, 708, 709, 1285
BseMII CTCAG 4 cut(s) 990, 1023, 1257, 1298
BseNI ACTGG 2 cut(s) 256, 640
BseRI GAGGAG 5 cut(s) 1004, 1217, 1377, 1380, 1425
BseSI GKGCMC 2 cut(s) 258, 362
BseXI GCAGC 3 cut(s) 396, 899, 1432
BseYI CCCAGC 1 cut(s) 168
BsgI GTGCAG 1 cut(s) 148
Bsh1236I CGCG 5 cut(s) 153, 326, 546, 901, 1262
Bsh1285I CGRYCG 1 cut(s) 583
BshFI GGCC 9 cut(s) 256, 272, 303, 384, 536, 638, 655, 1153, 1232
BshNI GGYRCC 1 cut(s) 646
BsiEI CGRYCG 1 cut(s) 583
BsiHKCI CYCGRG 2 cut(s) 857, 1197
BsiSI CCGG 1 cut(s) 1233
BslFI GGGAC 1 cut(s) 803
BslI CCNNNNNNNGG 6 cut(s) 36, 320, 477, 708, 709, 1285
BsmAI GTCTC 2 cut(s) 986, 1260
BsmFI GGGAC 1 cut(s) 803
BsmI GAATGC 1 cut(s) 84
BsnI GGCC 9 cut(s) 256, 272, 303, 384, 536, 638, 655, 1153, 1232
BsoBI CYCGRG 2 cut(s) 857, 1197
Bsp120I GGGCCC 1 cut(s) 254
Bsp1286I GDGCHC 3 cut(s) 258, 362, 529
Bsp143I GATC 7 cut(s) 393, 454, 511, 819, 1024, 1290, 1363
BspACI CCGC 8 cut(s) 493, 583, 704, 899, 1029, 1260, 1262, 1443
BspANI GGCC 9 cut(s) 256, 272, 303, 384, 536, 638, 655, 1153, 1232
BspCNI CTCAG 4 cut(s) 991, 1024, 1258, 1297
BspFNI CGCG 5 cut(s) 153, 326, 546, 901, 1262
BspHI TCATGA 1 cut(s) 1015
BspLI GGNNCC 7 cut(s) 256, 395, 456, 648, 791, 1152, 1332
BspMAI CTGCAG 2 cut(s) 414, 889
BspMI ACCTGC 1 cut(s) 801
BspOI GCTAGC 1 cut(s) 1415
BspPI GGATC 7 cut(s) 388, 401, 449, 462, 519, 1019, 1298
BspT107I GGYRCC 1 cut(s) 646
BspTI CTTAAG 1 cut(s) 499
BsrFI RCCGGY 1 cut(s) 1232
BsrI ACTGG 2 cut(s) 256, 640
BssAI RCCGGY 1 cut(s) 1232
BssECI CCNNGG 7 cut(s) 257, 304, 650, 707, 932, 953, 1260
BssMI GATC 7 cut(s) 393, 454, 511, 819, 1024, 1290, 1363
BssSI CACGAG 1 cut(s) 947
BssT1I CCWWGG 1 cut(s) 304
Bst2BI CACGAG 1 cut(s) 947
Bst2UI CCWGG 7 cut(s) 200, 259, 533, 652, 708, 933, 954
Bst4CI ACNGT 3 cut(s) 440, 785, 964
Bst6I CTCTTC 2 cut(s) 815, 1161
BstAFI CTTAAG 1 cut(s) 499
BstC8I GCNNGC 3 cut(s) 622, 1234, 1413
BstDEI CTNAG 4 cut(s) 999, 1032, 1266, 1284
BstDSI CCRYGG 1 cut(s) 1260
BstEII GGTNACC 1 cut(s) 1166
BstENI CCTNNNNNAGG 1 cut(s) 318
BstF5I GGATG 3 cut(s) 696, 1042, 1245
BstFNI CGCG 5 cut(s) 153, 326, 546, 901, 1262
BstH2I RGCGCY 1 cut(s) 874
BstHHI GCGC 4 cut(s) 153, 326, 548, 873
BstKTI GATC 7 cut(s) 396, 457, 514, 822, 1027, 1293, 1366
BstMAI GTCTC 2 cut(s) 986, 1260
BstMBI GATC 7 cut(s) 393, 454, 511, 819, 1024, 1290, 1363
BstMCI CGRYCG 1 cut(s) 583
BstMWI GCNNNNNNNGC 2 cut(s) 533, 1408
BstNI CCWGG 7 cut(s) 200, 259, 533, 652, 708, 933, 954
BstPI GGTNACC 1 cut(s) 1166
BstSCI CCNGG 7 cut(s) 198, 257, 531, 650, 706, 931, 952
BstSFI CTRYAG 3 cut(s) 410, 885, 1116
BstSLI GKGCMC 2 cut(s) 258, 362
BstUI CGCG 5 cut(s) 153, 326, 546, 901, 1262
BstV1I GCAGC 3 cut(s) 396, 899, 1432
BstV2I GAAGAC 1 cut(s) 1002
BstX2I RGATCY 3 cut(s) 393, 454, 1024
BstXI CCANNNNNNTGG 1 cut(s) 953
BstYI RGATCY 3 cut(s) 393, 454, 1024
Bsu36I CCTNAGG 1 cut(s) 999
BsuRI GGCC 9 cut(s) 256, 272, 303, 384, 536, 638, 655, 1153, 1232
BtgI CCRYGG 1 cut(s) 1260
BtgZI GCGATG 1 cut(s) 527
BtrI CACGTC 1 cut(s) 929
BtsCI GGATG 3 cut(s) 696, 1042, 1245
BtsI GCAGTG 1 cut(s) 273
BtsIMutI CAGTG 2 cut(s) 273, 647
BveI ACCTGC 1 cut(s) 801
Cac8I GCNNGC 3 cut(s) 622, 1234, 1413
CciI TCATGA 1 cut(s) 1015
CfoI GCGC 4 cut(s) 153, 326, 548, 873
Cfr10I RCCGGY 1 cut(s) 1232
Cfr42I CCGCGG 1 cut(s) 1263
Csp6I GTAC 4 cut(s) 647, 724, 1175, 1243
CspCI CAANNNNNGTGG 4 cut(s) 484, 519, 1384, 1419
CviAII CATG 6 cut(s) 68, 103, 832, 1016, 1055, 1172
CviQI GTAC 4 cut(s) 647, 724, 1175, 1243
DdeI CTNAG 4 cut(s) 999, 1032, 1266, 1284
DpnI GATC 7 cut(s) 395, 456, 513, 821, 1026, 1292, 1365
DpnII GATC 7 cut(s) 393, 454, 511, 819, 1024, 1290, 1363
EaeI YGGCCR 2 cut(s) 270, 1230
Eam1104I CTCTTC 2 cut(s) 815, 1161
EarI CTCTTC 2 cut(s) 815, 1161
Eco130I CCWWGG 1 cut(s) 304
Eco24I GRGCYC 2 cut(s) 258, 529
Eco32I GATATC 1 cut(s) 1183
Eco47I GGWCC 5 cut(s) 790, 853, 1129, 1210, 1276
Eco47III AGCGCT 1 cut(s) 872
Eco57I CTGAAG 1 cut(s) 1332
Eco81I CCTNAGG 1 cut(s) 999
Eco88I CYCGRG 2 cut(s) 857, 1197
Eco91I GGTNACC 1 cut(s) 1166
EcoNI CCTNNNNNAGG 1 cut(s) 318
EcoO109I RGGNCCY 4 cut(s) 255, 790, 853, 1151
EcoO65I GGTNACC 1 cut(s) 1166
EcoRI GAATTC 1 cut(s) 203
EcoRII CCWGG 7 cut(s) 198, 257, 531, 650, 706, 931, 952
EcoRV GATATC 1 cut(s) 1183
EcoT14I CCWWGG 1 cut(s) 304
EcoT38I GRGCYC 2 cut(s) 258, 529
ErhI CCWWGG 1 cut(s) 304
FaeI CATG 6 cut(s) 71, 106, 835, 1019, 1058, 1175
FaqI GGGAC 1 cut(s) 803
FatI CATG 6 cut(s) 67, 102, 831, 1015, 1054, 1171
FauI CCCGC 4 cut(s) 711, 906, 1036, 1267
FauNDI CATATG 1 cut(s) 799
FblI GTMKAC 1 cut(s) 741
Fnu4HI GCNGC 5 cut(s) 410, 493, 888, 1263, 1446
FokI GGATG 3 cut(s) 703, 1049, 1232
FriOI GRGCYC 2 cut(s) 258, 529
Fsp4HI GCNGC 5 cut(s) 410, 493, 888, 1263, 1446
FspBI CTAG 7 cut(s) 17, 461, 843, 1124, 1346, 1398, 1412
GlaI GCGC 4 cut(s) 152, 325, 547, 872
GluI GCNGC 5 cut(s) 410, 493, 888, 1263, 1446
GsaI CCCAGC 1 cut(s) 172
GsuI CTGGAG 1 cut(s) 869
HaeII RGCGCY 1 cut(s) 874
HaeIII GGCC 9 cut(s) 256, 272, 303, 384, 536, 638, 655, 1153, 1232
HapII CCGG 1 cut(s) 1233
HhaI GCGC 4 cut(s) 153, 326, 548, 873
Hin1II CATG 6 cut(s) 71, 106, 835, 1019, 1058, 1175
Hin6I GCGC 4 cut(s) 151, 324, 546, 871
HinP1I GCGC 4 cut(s) 151, 324, 546, 871
HincII GTYRAC 1 cut(s) 742
HindII GTYRAC 1 cut(s) 742
HinfI GANTC 8 cut(s) 665, 862, 994, 1007, 1043, 1111, 1253, 1375
HpaII CCGG 1 cut(s) 1233
HphI GGTGA 5 cut(s) 452, 1016, 1150, 1178, 1366
Hpy166II GTNNAC 3 cut(s) 506, 742, 781
Hpy188I TCNGA 1 cut(s) 716
Hpy188III TCNNGA 8 cut(s) 391, 848, 859, 866, 967, 998, 1016, 1199
Hpy8I GTNNAC 3 cut(s) 506, 742, 781
Hpy99I CGWCG 1 cut(s) 746
HpyAV CCTTC 3 cut(s) 373, 924, 1352
HpyCH4III ACNGT 3 cut(s) 440, 785, 964
HpyCH4IV ACGT 2 cut(s) 928, 1241
HpyCH4V TGCA 7 cut(s) 67, 165, 216, 231, 297, 412, 887
HpyF10VI GCNNNNNNNGC 2 cut(s) 533, 1408
HpyF3I CTNAG 4 cut(s) 999, 1032, 1266, 1284
HpySE526I ACGT 2 cut(s) 928, 1241
Hsp92II CATG 6 cut(s) 71, 106, 835, 1019, 1058, 1175
HspAI GCGC 4 cut(s) 151, 324, 546, 871
KpnI GGTACC 1 cut(s) 650
KroI GCCGGC 1 cut(s) 1232
KroNI GCCGGC 1 cut(s) 1234
KspI CCGCGG 1 cut(s) 1263
Kzo9I GATC 7 cut(s) 393, 454, 511, 819, 1024, 1290, 1363
LmnI GCTCC 1 cut(s) 341
Lsp1109I GCAGC 3 cut(s) 396, 899, 1432
LweI GCATC 2 cut(s) 133, 1207
MaeI CTAG 7 cut(s) 17, 461, 843, 1124, 1346, 1398, 1412
MaeII ACGT 2 cut(s) 928, 1241
MaeIII GTNAC 3 cut(s) 173, 1166, 1354
MalI GATC 7 cut(s) 395, 456, 513, 821, 1026, 1292, 1365
MboI GATC 7 cut(s) 393, 454, 511, 819, 1024, 1290, 1363
MboII GAAGA 5 cut(s) 802, 1002, 1034, 1148, 1325
MflI RGATCY 3 cut(s) 393, 454, 1024
MhlI GDGCHC 3 cut(s) 258, 362, 529
MlsI TGGCCA 1 cut(s) 272
MluNI TGGCCA 1 cut(s) 272
MlyI GAGTC 4 cut(s) 988, 1016, 1037, 1262
MmeI TCCRAC 3 cut(s) 264, 903, 1254
Mox20I TGGCCA 1 cut(s) 272
MroNI GCCGGC 1 cut(s) 1232
MscI TGGCCA 1 cut(s) 272
MseI TTAA 2 cut(s) 500, 1450
MslI CAYNNNNRTG 1 cut(s) 438
Msp20I TGGCCA 1 cut(s) 272
MspA1I CMGCKG 3 cut(s) 1031, 1262, 1445
MspCI CTTAAG 1 cut(s) 499
MspI CCGG 1 cut(s) 1233
MspR9I CCNGG 7 cut(s) 200, 259, 533, 652, 708, 933, 954
Mva1269I GAATGC 1 cut(s) 84
MvaI CCWGG 7 cut(s) 200, 259, 533, 652, 708, 933, 954
MvnI CGCG 5 cut(s) 153, 326, 546, 901, 1262
MwoI GCNNNNNNNGC 2 cut(s) 533, 1408
NaeI GCCGGC 1 cut(s) 1234
NdeI CATATG 1 cut(s) 799
NdeII GATC 7 cut(s) 393, 454, 511, 819, 1024, 1290, 1363
NgoMIV GCCGGC 1 cut(s) 1232
NheI GCTAGC 1 cut(s) 1411
NlaIII CATG 6 cut(s) 71, 106, 835, 1019, 1058, 1175
NlaIV GGNNCC 7 cut(s) 256, 395, 456, 648, 791, 1152, 1332
NmuCI GTSAC 3 cut(s) 173, 1166, 1354
PaeR7I CTCGAG 2 cut(s) 857, 1197
PagI TCATGA 1 cut(s) 1015
PcsI WCGNNNNNNNCGW 2 cut(s) 741, 925
PctI GAATGC 1 cut(s) 84
PdiI GCCGGC 1 cut(s) 1234
PfeI GAWTC 4 cut(s) 665, 862, 1111, 1375
PfoI TCCNGGA 1 cut(s) 198
PkrI GCNGC 5 cut(s) 411, 494, 889, 1264, 1447
PleI GAGTC 4 cut(s) 988, 1015, 1037, 1261
PpsI GAGTC 4 cut(s) 988, 1015, 1037, 1261
PpuMI RGGWCCY 2 cut(s) 790, 853
PsiI TTATAA 1 cut(s) 345
Psp5II RGGWCCY 2 cut(s) 790, 853
Psp6I CCWGG 7 cut(s) 198, 257, 531, 650, 706, 931, 952
PspEI GGTNACC 1 cut(s) 1166
PspFI CCCAGC 1 cut(s) 168
PspGI CCWGG 7 cut(s) 198, 257, 531, 650, 706, 931, 952
PspN4I GGNNCC 7 cut(s) 256, 395, 456, 648, 791, 1152, 1332
PspOMI GGGCCC 1 cut(s) 254
PspPPI RGGWCCY 2 cut(s) 790, 853
PstI CTGCAG 2 cut(s) 414, 889
PsuI RGATCY 3 cut(s) 393, 454, 1024
RsaI GTAC 4 cut(s) 648, 725, 1176, 1244
RsaNI GTAC 4 cut(s) 647, 724, 1175, 1243
RseI CAYNNNNRTG 1 cut(s) 438
SacII CCGCGG 1 cut(s) 1263
SalI GTCGAC 1 cut(s) 740
SaqAI TTAA 2 cut(s) 500, 1450
SatI GCNGC 5 cut(s) 410, 493, 888, 1263, 1446
Sau3AI GATC 7 cut(s) 393, 454, 511, 819, 1024, 1290, 1363
SchI GAGTC 4 cut(s) 988, 1016, 1037, 1262
ScrFI CCNGG 7 cut(s) 200, 259, 533, 652, 708, 933, 954
SduI GDGCHC 3 cut(s) 258, 362, 529
SfaNI GCATC 2 cut(s) 133, 1207
SfcI CTRYAG 3 cut(s) 410, 885, 1116
Sfr274I CTCGAG 2 cut(s) 857, 1197
Sfr303I CCGCGG 1 cut(s) 1263
SgrBI CCGCGG 1 cut(s) 1263
SinI GGWCC 5 cut(s) 790, 853, 1129, 1210, 1276
SlaI CTCGAG 2 cut(s) 857, 1197
SmiMI CAYNNNNRTG 1 cut(s) 438
SmlI CTYRAG 5 cut(s) 499, 857, 866, 1197, 1424
SmoI CTYRAG 5 cut(s) 499, 857, 866, 1197, 1424
SsiI CCGC 8 cut(s) 493, 583, 704, 899, 1029, 1260, 1262, 1443
SspMI CTAG 7 cut(s) 17, 461, 843, 1124, 1346, 1398, 1412
StyD4I CCNGG 7 cut(s) 198, 257, 531, 650, 706, 931, 952
StyI CCWWGG 1 cut(s) 304
TaaI ACNGT 3 cut(s) 440, 785, 964
TaiI ACGT 2 cut(s) 931, 1244
TaqI TCGA 6 cut(s) 366, 741, 858, 1185, 1198, 1338
TauI GCSGC 2 cut(s) 495, 1265
TfiI GAWTC 4 cut(s) 665, 862, 1111, 1375
Tru1I TTAA 2 cut(s) 500, 1450
Tru9I TTAA 2 cut(s) 500, 1450
TscAI CASTG 2 cut(s) 280, 647
TseFI GTSAC 3 cut(s) 173, 1166, 1354
TseI GCWGC 3 cut(s) 409, 887, 1445
Tsp45I GTSAC 3 cut(s) 173, 1166, 1354
TspDTI ATGAA 5 cut(s) 530, 1035, 1071, 1158, 1332
TspGWI ACGGA 1 cut(s) 766
TspRI CASTG 2 cut(s) 280, 647
Vha464I CTTAAG 1 cut(s) 499
VpaK11BI GGWCC 5 cut(s) 790, 853, 1129, 1210, 1276
XagI CCTNNNNNAGG 1 cut(s) 318
XapI RAATTY 4 cut(s) 203, 218, 262, 466
XcmI CCANNNNNNNNNTGG 1 cut(s) 556
XhoI CTCGAG 2 cut(s) 857, 1197
XmiI GTMKAC 1 cut(s) 741
XspI CTAG 7 cut(s) 17, 461, 843, 1124, 1346, 1398, 1412
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.