Rmu_sc0000276.1_g000076

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000276.1
OG0000214
Physical Location & Seq
Reverse (-)
252418 .. 255233
2816 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000276.1_g000076.1.cds

Sequence Viewer

Length: 2571 bp
atgcgattctcaagatggaataatgactcattaattatcaaccagggccactcactggagaaagccgcattcaactggcggactaacatgagtattcgatgtagacgtcagaccggagaggagagaagtcgattgatggtctttggtggcggtgataatcaaacgagtctgggtcccacacctcgcgatcgtttgccagatgatgctatggcctattatgggcttcccatccgccgtcccatagcggctcttcggcaagtgcctggtgattttagcagttggggaccaaggaggaaagtgggcttctggcctaccgtcactcccgaggaaaaggtttggtatcaggaggtccgagagagagatttggcccgatgggacgcggtgggtatcactcaaaccatcgatctatgcttctgtcttccccataatactagccctgcaccgctagccgccgctctttgtttctggaacacctccagcaatacattcgatttccggtttgggcagatgagcataactctgttggatgttcttaccatcacggggttgcccattgactttgacccctatgtgcatggtcagtttgatggcattcaattttctttgagaatggatatggctagtcgagggcattacagcaaatcctacccattctggcgcgactattactgcacccaacgagaccatacaggaggtatcgcattcctggaattctggctttgcaaatttatcttttgcacttcttccaacaaacctactgggccctggaattctctggccactgctctatacaacggtatttgcgttggccttgggcaacctgtattgggtgcgttatatcgctccctttatagagccgtaatgcgcctatttgataccgacattagttgccccttctggatccttgccttttggctgcagatttatttcactctcttccgtcgtggcgatattccacaggaacctccagttgattcccttttggggaactggctttgccgcaacgtaaggtatcgagctccaccctactccgagtgttttatttacttgtacttgctgggagagatgtcggacccaaaaatagtcctttctaggcgattccctcctccccttgatgatggatttctgcccagtggacgggatcatagtgaaagagccctcctggcctttcgttgcgccatctcctacttggatattcgtcttgccactgatcgcgtaagttatgagctctacgcccctaaccactttgctcgccaatttgggttggcccagttggtaccctggcctctgattgattctgccaattactacacctcttggcggagattatccccgcctgggtctgccccctttcagaaagtgtctgtgaactgttgggacctgccacatgatgaactcttcgtcctaatctttcgtggcatgagtagccctggtccggaagaccgcgagattcttgagcgcttctccaaacctgtggaacaacccccgcgacctattctaccttctcgctcattgcgtccagggatacaaatccacgagcctagggcaacagtaagtttttgtctttcttcaccattccatttccttgtgttgattttcccgctcttattcctgagtgtgtttgcagcaaactacccggagcagacagcctctgttcaggcagggaaacaaaaggcaatagcagaggagacttctgagggagagtcttcgcatgatgaagatcctgctgaggccactgctgtccttgcttgcaaacgcgatcgagctcaattcgtcgaagagagttttgaagatgatgaacctctggcaatgcgactggtccgtcaaaggaccactgatccctctcgcctgagcgaggctggaccctcagccactgcagaagagccaattctctcgctagttcaagcatcaactaaccctgtggcacctctcccatctcccactacagagcatctgcaaggtcctaccattctaataatgatatctgatgacgactcctcggaggatgaaagcgtggaaagccactctgagacttctgctgcttatgaggaactgatgacgacagagattctctcggtactagaggttcaagaggtgaatgaggcggggcctcttcgtcttggtgaccacgtaccagatattgacccgacagctcgagaggtaagccactgtttggccaatactttccatttccctttagatccaaccctgctttctgacatttctgaacctaaccaggattctatttgtaccgaggaggcggctgcaaaagctgctggtcttatcggcgggacagtcgccccagagatggaaaatgatactaatggtggtggtgccccccaagtctcacgaacaaatgagacaaccgtcgaagctgagggctctgtacttgaatctgctccacttgcccatggtgagcctcgagttaagtttccagattcccctgaggctgaagagacagatcaacctgttgaagatgaagaaactgaggaagctgtccacccttttgcattggtggttcgtgatcctgtggcgcctctgccgcctcctcctcacagaccaacctgttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

856

Amino Acids

95.87

Weight (kDa)

4.89

Isoelectric Point (pI)

56.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000214)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0079611
rosa_multiflora Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha Rh3DG208400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1821
AatII GACGTC 1 cut(s) 109
Acc36I ACCTGC 1 cut(s) 1389
Acc65I GGTACC 1 cut(s) 1276
AccB1I GGYRCC 4 cut(s) 1276, 1924, 2333, 2533
AccB7I CCANNNNNTGG 2 cut(s) 55, 2173
AccBSI CCGCTC 2 cut(s) 455, 1603
AccI GTMKAC 1 cut(s) 103
AccII CGCG 7 cut(s) 186, 380, 660, 1215, 1446, 1489, 1758
AccIII TCCGGA 1 cut(s) 1435
AclWI GGATC 7 cut(s) 895, 908, 1149, 1715, 1832, 2195, 2519
AcoI YGGCCR 2 cut(s) 777, 2175
AcsI RAATTY 3 cut(s) 710, 725, 769
AcuI CTGAAG 1 cut(s) 2472
AcyI GRCGYC 2 cut(s) 106, 2534
AfaI GTAC 6 cut(s) 1052, 1278, 2079, 2133, 2251, 2388
AfeI AGCGCT 1 cut(s) 1460
AgsI TTSAA 7 cut(s) 73, 596, 1790, 1904, 2090, 2393, 2474
AjuI GAANNNNNNNTTGG 2 cut(s) 2197, 2229
AloI GAACNNNNNNTCC 2 cut(s) 1386, 1418
AluBI AGCT 7 cut(s) 1019, 1228, 1766, 2153, 2273, 2375, 2495
AluI AGCT 7 cut(s) 1019, 1228, 1766, 2153, 2273, 2375, 2495
Alw21I GWGCWC 3 cut(s) 1021, 1230, 1768
Alw26I GTCTC 6 cut(s) 675, 1682, 2024, 2350, 2354, 2450
AlwI GGATC 7 cut(s) 895, 908, 1149, 1715, 1832, 2195, 2519
AlwNI CAGNNNCTG 2 cut(s) 1652, 1874
Ama87I CYCGRG 3 cut(s) 323, 2154, 2421
Aor13HI TCCGGA 1 cut(s) 1435
Aor51HI AGCGCT 1 cut(s) 1460
ApaI GGGCCC 1 cut(s) 765
ApeKI GCWGC 5 cut(s) 916, 1625, 2039, 2264, 2273
ApoI RAATTY 3 cut(s) 710, 725, 769
AseI ATTAAT 1 cut(s) 32
Asp718I GGTACC 1 cut(s) 1276
AspA2I CCTAGG 1 cut(s) 1541
AspLEI GCGC 5 cut(s) 660, 867, 1178, 1461, 2536
AsuC2I CCSGG 1 cut(s) 1637
AsuHPI GGTGA 6 cut(s) 164, 278, 1563, 2107, 2135, 2426
AsuNHI GCTAGC 1 cut(s) 445
AvaI CYCGRG 3 cut(s) 323, 2154, 2421
AvrII CCTAGG 1 cut(s) 1541
AxyI CCTNAGG 1 cut(s) 2445
BaeGI GKGCMC 2 cut(s) 765, 2338
BalI TGGCCA 2 cut(s) 779, 2177
BamHI GGATCC 1 cut(s) 900
BanI GGYRCC 4 cut(s) 1276, 1924, 2333, 2533
BanII GRGCYC 6 cut(s) 765, 1021, 1159, 1230, 1768, 2384
BauI CACGAG 1 cut(s) 1535
BbsI GAAGAC 3 cut(s) 410, 1446, 1698
Bbv12I GWGCWC 3 cut(s) 1021, 1230, 1768
BbvCI CCTCAGC 3 cut(s) 1728, 1867, 2376
BbvI GCAGC 5 cut(s) 903, 1637, 2026, 2251, 2260
BceAI ACGGC 2 cut(s) 219, 842
BcgI CGANNNNNNTGC 2 cut(s) 469, 503
BciVI GTATCC 1 cut(s) 1518
BcnI CCSGG 1 cut(s) 1637
BcoDI GTCTC 6 cut(s) 675, 1682, 2024, 2350, 2354, 2450
BfaI CTAG 7 cut(s) 432, 446, 621, 1092, 1542, 1898, 2081
BfmI CTRYAG 3 cut(s) 917, 1875, 1944
BfoI RGCGCY 2 cut(s) 1462, 2537
BfuAI ACCTGC 1 cut(s) 1389
BfuI GTATCC 1 cut(s) 1518
BglI GCCNNNNNGGC 1 cut(s) 1163
BlnI CCTAGG 1 cut(s) 1541
BmeT110I CYCGRG 3 cut(s) 323, 2154, 2421
BmrI ACTGGG 3 cut(s) 768, 1125, 1264
BmsI GCATC 3 cut(s) 193, 1916, 1960
BmtI GCTAGC 1 cut(s) 449
BmuI ACTGGG 3 cut(s) 768, 1125, 1264
BoxI GACNNNNGTC 1 cut(s) 2366
BpiI GAAGAC 3 cut(s) 410, 1446, 1698
BplI GAGNNNNNCTC 6 cut(s) 502, 534, 1448, 1480, 2057, 2089
BpmI CTGGAG 3 cut(s) 77, 460, 951
Bpu10I CCTNAGC 4 cut(s) 1728, 1850, 1867, 2376
BpuEI CTTGAG 1 cut(s) 1475
BpuMI CCSGG 1 cut(s) 1637
Bsa29I ATCGAT 1 cut(s) 402
BsaAI YACGTR 1 cut(s) 2131
BsaBI GATNNNNATC 2 cut(s) 1529, 1719
BsaHI GRCGYC 2 cut(s) 106, 2534
BsaI GGTCTC 1 cut(s) 675
BsaWI WCCGGW 3 cut(s) 113, 495, 1435
BsaXI ACNNNNNCTCC 2 cut(s) 304, 334
Bse1I ACTGG 8 cut(s) 60, 80, 763, 968, 995, 1131, 1270, 1821
Bse21I CCTNAGG 1 cut(s) 2445
Bse3DI GCAATG 2 cut(s) 1511, 1815
Bse8I GATNNNNATC 2 cut(s) 1529, 1719
BseAI TCCGGA 1 cut(s) 1435
BseCI ATCGAT 1 cut(s) 402
BseGI GGATG 3 cut(s) 228, 532, 2011
BseJI GATNNNNATC 2 cut(s) 1529, 1719
BseMI GCAATG 2 cut(s) 1511, 1815
BseMII CTCAG 9 cut(s) 1604, 1686, 1719, 1841, 1881, 2019, 2367, 2436, 2478
BseNI ACTGG 8 cut(s) 60, 80, 763, 968, 995, 1131, 1270, 1821
BseRI GAGGAG 7 cut(s) 134, 1095, 1700, 1987, 2270, 2538, 2541
BseSI GKGCMC 2 cut(s) 765, 2338
BseXI GCAGC 5 cut(s) 903, 1637, 2026, 2251, 2260
BseYI CCCAGC 1 cut(s) 1057
BsgI GTGCAG 2 cut(s) 423, 655
Bsh1236I CGCG 7 cut(s) 186, 380, 660, 1215, 1446, 1489, 1758
Bsh1285I CGRYCG 2 cut(s) 190, 1762
BshNI GGYRCC 4 cut(s) 1276, 1924, 2333, 2533
BshVI ATCGAT 1 cut(s) 402
BsiEI CGRYCG 2 cut(s) 190, 1762
BsiHKAI GWGCWC 3 cut(s) 1021, 1230, 1768
BsiHKCI CYCGRG 3 cut(s) 323, 2154, 2421
BsiSI CCGG 4 cut(s) 114, 496, 1436, 1637
BslFI GGGAC 6 cut(s) 159, 222, 297, 389, 1391, 2305
BsmAI GTCTC 6 cut(s) 675, 1682, 2024, 2350, 2354, 2450
BsmFI GGGAC 6 cut(s) 159, 222, 297, 389, 1391, 2305
BsmI GAATGC 3 cut(s) 68, 591, 701
Bso31I GGTCTC 1 cut(s) 675
BsoBI CYCGRG 3 cut(s) 323, 2154, 2421
Bsp120I GGGCCC 1 cut(s) 761
Bsp1286I GDGCHC 7 cut(s) 765, 1021, 1159, 1230, 1768, 2338, 2384
Bsp13I TCCGGA 1 cut(s) 1435
Bsp19I CCATGG 1 cut(s) 2410
Bsp68I TCGCGA 1 cut(s) 186
BspCNI CTCAG 9 cut(s) 1605, 1687, 1720, 1842, 1880, 2020, 2368, 2437, 2479
BspDI ATCGAT 1 cut(s) 402
BspEI TCCGGA 1 cut(s) 1435
BspFNI CGCG 7 cut(s) 186, 380, 660, 1215, 1446, 1489, 1758
BspMAI CTGCAG 2 cut(s) 921, 1879
BspMI ACCTGC 1 cut(s) 1389
BspOI GCTAGC 1 cut(s) 449
BspPI GGATC 7 cut(s) 895, 908, 1149, 1715, 1832, 2195, 2519
BspQI GCTCTTC 2 cut(s) 255, 1875
BspT107I GGYRCC 4 cut(s) 1276, 1924, 2333, 2533
BspTNI GGTCTC 1 cut(s) 675
BsrBI CCGCTC 2 cut(s) 455, 1603
BsrDI GCAATG 2 cut(s) 1511, 1815
BsrI ACTGG 8 cut(s) 60, 80, 763, 968, 995, 1131, 1270, 1821
BssNI GRCGYC 2 cut(s) 106, 2534
BssSI CACGAG 1 cut(s) 1535
BssT1I CCWWGG 4 cut(s) 287, 811, 1541, 2410
Bst2BI CACGAG 1 cut(s) 1535
Bst4CI ACNGT 7 cut(s) 316, 797, 1373, 1552, 2171, 2296, 2368
Bst6I CTCTTC 7 cut(s) 255, 941, 1403, 1773, 1875, 2118, 2448
BstACI GRCGYC 2 cut(s) 106, 2534
BstAPI GCANNNNNTGC 1 cut(s) 2273
BstBAI YACGTR 1 cut(s) 2131
BstC8I GCNNGC 3 cut(s) 447, 1252, 1750
BstDEI CTNAG 9 cut(s) 1613, 1695, 1728, 1850, 1867, 2028, 2376, 2445, 2487
BstDSI CCRYGG 1 cut(s) 2410
BstEII GGTNACC 1 cut(s) 2123
BstENI CCTNNNNNAGG 1 cut(s) 1853
BstF5I GGATG 3 cut(s) 228, 532, 2011
BstFNI CGCG 7 cut(s) 186, 380, 660, 1215, 1446, 1489, 1758
BstH2I RGCGCY 2 cut(s) 1462, 2537
BstHHI GCGC 5 cut(s) 660, 867, 1178, 1461, 2536
BstMAI GTCTC 6 cut(s) 675, 1682, 2024, 2350, 2354, 2450
BstMCI CGRYCG 2 cut(s) 190, 1762
BstMWI GCNNNNNNNGC 9 cut(s) 446, 1163, 1425, 1745, 2019, 2270, 2273, 2405, 2542
BstPAI GACNNNNGTC 1 cut(s) 2366
BstPI GGTNACC 1 cut(s) 2123
BstSFI CTRYAG 3 cut(s) 917, 1875, 1944
BstSLI GKGCMC 2 cut(s) 765, 2338
BstUI CGCG 7 cut(s) 186, 380, 660, 1215, 1446, 1489, 1758
BstV1I GCAGC 5 cut(s) 903, 1637, 2026, 2251, 2260
BstV2I GAAGAC 3 cut(s) 410, 1446, 1698
BstX2I RGATCY 3 cut(s) 900, 1720, 2200
BstXI CCANNNNNNTGG 1 cut(s) 1474
BstYI RGATCY 3 cut(s) 900, 1720, 2200
Bsu15I ATCGAT 1 cut(s) 402
Bsu36I CCTNAGG 1 cut(s) 2445
BsuI GTATCC 1 cut(s) 1518
BsuTUI ATCGAT 1 cut(s) 402
BtgI CCRYGG 1 cut(s) 2410
BtsCI GGATG 3 cut(s) 228, 532, 2011
BtsI GCAGTG 3 cut(s) 780, 1734, 1872
BtsIMutI CAGTG 8 cut(s) 53, 780, 1138, 1206, 1734, 1833, 1872, 2167
BtuMI TCGCGA 1 cut(s) 186
BveI ACCTGC 1 cut(s) 1389
Cac8I GCNNGC 3 cut(s) 447, 1252, 1750
CaiI CAGNNNCTG 2 cut(s) 1652, 1874
CfoI GCGC 5 cut(s) 660, 867, 1178, 1461, 2536
ClaI ATCGAT 1 cut(s) 402
CseI GACGC 2 cut(s) 386, 1505
Csp6I GTAC 6 cut(s) 1051, 1277, 2078, 2132, 2250, 2387
CviAII CATG 6 cut(s) 88, 575, 1388, 1420, 1712, 2411
CviQI GTAC 6 cut(s) 1051, 1277, 2078, 2132, 2250, 2387
DdeI CTNAG 9 cut(s) 1613, 1695, 1728, 1850, 1867, 2028, 2376, 2445, 2487
DinI GGCGCC 1 cut(s) 2535
DrdI GACNNNNNNGTC 1 cut(s) 1821
DseDI GACNNNNNNGTC 1 cut(s) 1821
EaeI YGGCCR 2 cut(s) 777, 2175
Eam1104I CTCTTC 7 cut(s) 255, 941, 1403, 1773, 1875, 2118, 2448
EarI CTCTTC 7 cut(s) 255, 941, 1403, 1773, 1875, 2118, 2448
EciI GGCGGA 3 cut(s) 94, 221, 1336
Ecl136II GAGCTC 3 cut(s) 1019, 1228, 1766
Eco130I CCWWGG 4 cut(s) 287, 811, 1541, 2410
Eco24I GRGCYC 6 cut(s) 765, 1021, 1159, 1230, 1768, 2384
Eco31I GGTCTC 1 cut(s) 675
Eco32I GATATC 1 cut(s) 1983
Eco47III AGCGCT 1 cut(s) 1460
Eco53kI GAGCTC 3 cut(s) 1019, 1228, 1766
Eco57I CTGAAG 1 cut(s) 2472
Eco81I CCTNAGG 1 cut(s) 2445
Eco88I CYCGRG 3 cut(s) 323, 2154, 2421
Eco91I GGTNACC 1 cut(s) 2123
EcoICRI GAGCTC 3 cut(s) 1019, 1228, 1766
EcoNI CCTNNNNNAGG 1 cut(s) 1853
EcoO109I RGGNCCY 5 cut(s) 173, 762, 1378, 1961, 2108
EcoO65I GGTNACC 1 cut(s) 2123
EcoRI GAATTC 2 cut(s) 710, 769
EcoRV GATATC 1 cut(s) 1983
EcoT14I CCWWGG 4 cut(s) 287, 811, 1541, 2410
EcoT38I GRGCYC 6 cut(s) 765, 1021, 1159, 1230, 1768, 2384
EgeI GGCGCC 1 cut(s) 2535
EheI GGCGCC 1 cut(s) 2535
ErhI CCWWGG 4 cut(s) 287, 811, 1541, 2410
FaeI CATG 6 cut(s) 91, 578, 1391, 1423, 1715, 2414
FaqI GGGAC 6 cut(s) 159, 222, 297, 389, 1391, 2305
FatI CATG 6 cut(s) 87, 574, 1387, 1419, 1711, 2410
FauI CCCGC 5 cut(s) 1341, 1494, 1608, 2098, 2282
FblI GTMKAC 1 cut(s) 103
FokI GGATG 3 cut(s) 215, 539, 2018
FriOI GRGCYC 6 cut(s) 765, 1021, 1159, 1230, 1768, 2384
FspBI CTAG 7 cut(s) 432, 446, 621, 1092, 1542, 1898, 2081
GlaI GCGC 5 cut(s) 659, 866, 1177, 1460, 2535
GsaI CCCAGC 1 cut(s) 1061
GsuI CTGGAG 3 cut(s) 77, 460, 951
HaeII RGCGCY 2 cut(s) 1462, 2537
HapII CCGG 4 cut(s) 114, 496, 1436, 1637
HgaI GACGC 2 cut(s) 386, 1505
HhaI GCGC 5 cut(s) 660, 867, 1178, 1461, 2536
Hin1I GRCGYC 2 cut(s) 106, 2534
Hin1II CATG 6 cut(s) 91, 578, 1391, 1423, 1715, 2414
Hin6I GCGC 5 cut(s) 658, 865, 1176, 1459, 2534
HinP1I GCGC 5 cut(s) 658, 865, 1176, 1459, 2534
HpaII CCGG 4 cut(s) 114, 496, 1436, 1637
HphI GGTGA 6 cut(s) 164, 278, 1563, 2107, 2135, 2426
Hpy166II GTNNAC 4 cut(s) 104, 1136, 1369, 2500
Hpy8I GTNNAC 4 cut(s) 104, 1136, 1369, 2500
Hpy99I CGWCG 3 cut(s) 945, 1778, 2372
HpyAV CCTTC 2 cut(s) 904, 1512
HpyCH4III ACNGT 7 cut(s) 316, 797, 1373, 1552, 2171, 2296, 2368
HpyCH4IV ACGT 3 cut(s) 106, 1005, 2130
HpyF10VI GCNNNNNNNGC 9 cut(s) 446, 1163, 1425, 1745, 2019, 2270, 2273, 2405, 2542
HpyF3I CTNAG 9 cut(s) 1613, 1695, 1728, 1850, 1867, 2028, 2376, 2445, 2487
HpySE526I ACGT 3 cut(s) 106, 1005, 2130
Hsp92I GRCGYC 2 cut(s) 106, 2534
Hsp92II CATG 6 cut(s) 91, 578, 1391, 1423, 1715, 2414
HspAI GCGC 5 cut(s) 658, 865, 1176, 1459, 2534
KasI GGCGCC 1 cut(s) 2533
KflI GGGWCCC 1 cut(s) 173
Kpn2I TCCGGA 1 cut(s) 1435
KpnI GGTACC 1 cut(s) 1280
LguI GCTCTTC 2 cut(s) 255, 1875
LmnI GCTCC 4 cut(s) 848, 1024, 1639, 2404
Lsp1109I GCAGC 5 cut(s) 903, 1637, 2026, 2251, 2260
LweI GCATC 3 cut(s) 193, 1916, 1960
MaeI CTAG 7 cut(s) 432, 446, 621, 1092, 1542, 1898, 2081
MaeII ACGT 3 cut(s) 106, 1005, 2130
MaeIII GTNAC 2 cut(s) 316, 2123
MbiI CCGCTC 2 cut(s) 455, 1603
MflI RGATCY 3 cut(s) 900, 1720, 2200
MhlI GDGCHC 7 cut(s) 765, 1021, 1159, 1230, 1768, 2338, 2384
MlsI TGGCCA 2 cut(s) 779, 2177
MluCI AATT 9 cut(s) 33, 596, 710, 725, 769, 1256, 1303, 1769, 1887
MluNI TGGCCA 2 cut(s) 779, 2177
Mly113I GGCGCC 1 cut(s) 2534
MlyI GAGTC 4 cut(s) 20, 175, 1712, 1988
MmeI TCCRAC 4 cut(s) 504, 771, 1050, 2228
Mox20I TGGCCA 2 cut(s) 779, 2177
MroI TCCGGA 1 cut(s) 1435
MscI TGGCCA 2 cut(s) 779, 2177
MseI TTAA 2 cut(s) 32, 2427
Msp20I TGGCCA 2 cut(s) 779, 2177
MspI CCGG 4 cut(s) 114, 496, 1436, 1637
Mva1269I GAATGC 3 cut(s) 68, 591, 701
MvnI CGCG 7 cut(s) 186, 380, 660, 1215, 1446, 1489, 1758
MwoI GCNNNNNNNGC 9 cut(s) 446, 1163, 1425, 1745, 2019, 2270, 2273, 2405, 2542
NarI GGCGCC 1 cut(s) 2534
NciI CCSGG 1 cut(s) 1637
NcoI CCATGG 1 cut(s) 2410
NheI GCTAGC 1 cut(s) 445
NlaIII CATG 6 cut(s) 91, 578, 1391, 1423, 1715, 2414
NmuCI GTSAC 2 cut(s) 316, 2123
NruI TCGCGA 1 cut(s) 186
PaeR7I CTCGAG 2 cut(s) 2154, 2421
PciSI GCTCTTC 2 cut(s) 255, 1875
PcsI WCGNNNNNNNCGW 3 cut(s) 103, 801, 1513
PctI GAATGC 3 cut(s) 68, 591, 701
PfeI GAWTC 9 cut(s) 6, 974, 1098, 1295, 1450, 2068, 2240, 2393, 2438
PflMI CCANNNNNTGG 2 cut(s) 55, 2173
PfoI TCCNGGA 1 cut(s) 705
Ple19I CGATCG 2 cut(s) 190, 1762
PleI GAGTC 4 cut(s) 20, 174, 1711, 1988
PluTI GGCGCC 1 cut(s) 2537
PpsI GAGTC 4 cut(s) 20, 174, 1711, 1988
Ppu21I YACGTR 1 cut(s) 2131
PpuMI RGGWCCY 3 cut(s) 173, 1378, 1961
PshAI GACNNNNGTC 1 cut(s) 2366
PshBI ATTAAT 1 cut(s) 32
Psp124BI GAGCTC 3 cut(s) 1021, 1230, 1768
Psp5II RGGWCCY 3 cut(s) 173, 1378, 1961
PspEI GGTNACC 1 cut(s) 2123
PspFI CCCAGC 1 cut(s) 1057
PspOMI GGGCCC 1 cut(s) 761
PspPPI RGGWCCY 3 cut(s) 173, 1378, 1961
PspXI VCTCGAGB 1 cut(s) 2421
PsrI GAACNNNNNNTAC 2 cut(s) 2070, 2102
PstI CTGCAG 2 cut(s) 921, 1879
PstNI CAGNNNCTG 2 cut(s) 1652, 1874
PsuI RGATCY 3 cut(s) 900, 1720, 2200
PvuI CGATCG 2 cut(s) 190, 1762
RruI TCGCGA 1 cut(s) 186
RsaI GTAC 6 cut(s) 1052, 1278, 2079, 2133, 2251, 2388
RsaNI GTAC 6 cut(s) 1051, 1277, 2078, 2132, 2250, 2387
SacI GAGCTC 3 cut(s) 1021, 1230, 1768
SapI GCTCTTC 2 cut(s) 255, 1875
SaqAI TTAA 2 cut(s) 32, 2427
SchI GAGTC 4 cut(s) 20, 175, 1712, 1988
SduI GDGCHC 7 cut(s) 765, 1021, 1159, 1230, 1768, 2338, 2384
SfaNI GCATC 3 cut(s) 193, 1916, 1960
SfcI CTRYAG 3 cut(s) 917, 1875, 1944
SfoI GGCGCC 1 cut(s) 2535
Sfr274I CTCGAG 2 cut(s) 2154, 2421
SlaI CTCGAG 2 cut(s) 2154, 2421
SmlI CTYRAG 4 cut(s) 10, 1454, 2154, 2421
SmoI CTYRAG 4 cut(s) 10, 1454, 2154, 2421
Sse9I AATT 9 cut(s) 33, 596, 710, 725, 769, 1256, 1303, 1769, 1887
SspDI GGCGCC 1 cut(s) 2533
SspMI CTAG 7 cut(s) 432, 446, 621, 1092, 1542, 1898, 2081
SstI GAGCTC 3 cut(s) 1021, 1230, 1768
StyI CCWWGG 4 cut(s) 287, 811, 1541, 2410
TaaI ACNGT 7 cut(s) 316, 797, 1373, 1552, 2171, 2296, 2368
TaiI ACGT 3 cut(s) 109, 1008, 2133
TasI AATT 9 cut(s) 33, 596, 710, 725, 769, 1256, 1303, 1769, 1887
TatI WGTACW 2 cut(s) 1050, 2386
TauI GCSGC 7 cut(s) 68, 248, 452, 455, 1002, 2264, 2545
TfiI GAWTC 9 cut(s) 6, 974, 1098, 1295, 1450, 2068, 2240, 2393, 2438
Tru1I TTAA 2 cut(s) 32, 2427
Tru9I TTAA 2 cut(s) 32, 2427
TscAI CASTG 8 cut(s) 60, 787, 1138, 1213, 1741, 1840, 1879, 2174
TseFI GTSAC 2 cut(s) 316, 2123
TseI GCWGC 5 cut(s) 916, 1625, 2039, 2264, 2273
Tsp45I GTSAC 2 cut(s) 316, 2123
TspDTI ATGAA 5 cut(s) 1407, 1731, 1812, 2022, 2493
TspGWI ACGGA 2 cut(s) 929, 1811
TspRI CASTG 8 cut(s) 60, 787, 1138, 1213, 1741, 1840, 1879, 2174
Van91I CCANNNNNTGG 2 cut(s) 55, 2173
VspI ATTAAT 1 cut(s) 32
XagI CCTNNNNNAGG 1 cut(s) 1853
XapI RAATTY 3 cut(s) 710, 725, 769
XcmI CCANNNNNNNNNTGG 1 cut(s) 1186
XhoI CTCGAG 2 cut(s) 2154, 2421
XmaJI CCTAGG 1 cut(s) 1541
XmiI GTMKAC 1 cut(s) 103
XspI CTAG 7 cut(s) 432, 446, 621, 1092, 1542, 1898, 2081
ZraI GACGTC 1 cut(s) 107
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.