Rmu_sc0000126.1_g000018

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000126.1
OG0000214
Physical Location & Seq
Reverse (-)
72374 .. 75754
3381 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000126.1_g000018.1.cds

Sequence Viewer

Length: 3072 bp
atggcatccaagaaaccattcgttatcgatcaggcagatgaaatcactgagaaagccgcattcgcctggcgaactaacatgagtgttcgatgtagaagtcagaacggagaggagagaagtcgactgatgggctttggtggcggtgatagtcaagcgagtctgggtcccacacctcgcgatcgtttgccagatgatgctatggcctattatgggcttcccatccgccgtcccatagcagctcttcggcaggtgcctggtgattttagcagttggggaccaaggaggaaagtgggctactggcctaccgtcgctcccgaggaaaatatttggtatcaggagaaccgagcgagagatttggcccgatgggatgcggtgggtatcacccaaaccatcgatctatgcttctgtcttcccaataatactagccctgcaccgctagctgccgctctttgcttctggaacacctccagcaatacattcgatttccggtttgggcagatgagcataactctgctggatgttcttaccatcacggggttgcccattgactttgacccctatgtgcatggtcagtttgatggcactcaattttctttgagaatggatatggctggtcgagggcatcacagcagatcctacccatcctggcgcgaatattactgcacccggcgtgaccatacaggaggtatcgcattcctggaattctggctttgcaaatttatcttttgcacttcttccaacaaacctactggaccttggaattctctggccactgctctctacaatggtatttgcgttggccttgggcaacctgtattgggtgcgttatatcgctccctttatagagccataatgcgcccatttgataccgaaattagtggccccttctggatccttgccttttggctgcagatttatttccctctcttccgtcgcggtgatattccaaaggaacctccagctgattcccttttggggaactggctttgccgcaacgtaaggtatcgagctccaccctactccgagtgttttatttacttgtacttgctgggagagatgctggacccaaaaatagtcctttctaggcgattccctcctccccttgatgatggctttctgcccagtggacgggatcatagcgaaagagccttcctggcctttcgtcgcgccatctcctgcttggatattcgtcttaccactgaacgcgtaagttatgagctctatgcccctaaccattttgctcgccaatttgggttggcccagttggtaccctggcctctggttgattctgccaattactacacctcttggaggagattagccccacctgggtctgccccctttcagagtcagtttactttgatagtgattcccccttgggtcagagcgttgtaccccctcaacgatgtcgacgatgattatgctgattggtggaaagaagtgtccgtgaactgttgggacctgccacatgacgaactcttcgtccttatctttcgtggcatgagtagtcctggtccggaggaccgcaagattcttgagcgcttctccaaccttgcagcaccacccccgcgacctattctaccttctcgctcatcgcgtccagggatacaaatccacgagcctagggcaacacaaactacctggagcaggatagcctctgttcaggcggggaaacaaaaggcaatagcagaggagacttctgagggagagtcttcgcatgatgaagatcccgctgaggccactgctgtctttgcttgcaaacgcgatcgagctcaattcgtcgaagagagttttgaagatgacgaacctctgggaatgcgattggtccgtcaaaggaccactaatccctctcgcctgagcgaggctggaccctcagccactgcagaaaagccaactctctcgctagttcaagcatcaactaaccccgtggcgcctcttccgtctcccacatctacagagcatctgcaaggtcctaccattctaataatgatctccgatgacgactcctcggagcatgaaagtgtggaaagccactctgaggattctgccgcttatgaggaactgatgacgacagagattctcgcggcactaaaggtccaagaggtgaatgaagtgaggcctcttcctcttggtgacgacgtaccagatattgacccgacaactcgagaggattctgtttgtaccgaggaggtggctacaaacgctgagggtcctatcggtcggacagtcgcccaagagatgaaaaatgatactgacggtggtggtgccccccaagtcttgcgaataaatgagacaaccgtcgaagccgagggccctgtgcttgaatctgctccacttgcccatggtgagccgcgagttgagtttccagattctcccgcggctgaacggacagaccaacctattgaagatgaagaaactgaggaagttgtccacccttttgcattggtggttcgtgatcctgtggcgcctccgccgcctcctaccagattcgagagattgatgagggtgttagaggtaactcctccttctgctgtggatgaggctaagatggtgcttcacgaacatctgggtcctcaggtattggagactgacatcctctcgcgagtcttggaagccctaaggtatctttgccaggagaaggcattgaccctgcagcaatttagtgccattaacgatctgctgaatgaacttggtgaggcccgccaacgtcaaccggccgcgaacgcccaggctcacgacattcgagaggctttgaatagcctctctcgagaaatggacatctctcgcggtattttaaatgagcgaaccaaccgcctgcgggaactacaaatccaaaggtccgacttcaaacttcggatcgaggacctccatacaggtttagcctttgttgaaaacgcgattgctacagaagaagcccaactcgatgaacctctggctgcttctgaagaaatgggccgcagcctggcccatctcagagaacgggccactcaggccgaagctagtgctattgcggcgaatctccgcgtggaggaactttgcttgaaattgagcttcatgggccaatctctgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

1023

Amino Acids

114.69

Weight (kDa)

4.96

Isoelectric Point (pI)

53.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000214)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0079611
rosa_multiflora Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha Rh3DG208400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 238
Acc36I ACCTGC 2 cut(s) 238, 1470
Acc65I GGTACC 1 cut(s) 1267
AccB1I GGYRCC 5 cut(s) 250, 1267, 1930, 2264, 2464
AccBSI CCGCTC 1 cut(s) 446
AccI GTMKAC 2 cut(s) 121, 1410
AccIII TCCGGA 1 cut(s) 1516
AclWI GGATC 7 cut(s) 627, 886, 899, 1140, 1721, 2450, 2864
AcoI YGGCCR 2 cut(s) 768, 2715
AcsI RAATTY 3 cut(s) 701, 716, 760
AcuI CTGAAG 1 cut(s) 2964
AcyI GRCGYC 2 cut(s) 1931, 2465
AfaI GTAC 5 cut(s) 1043, 1269, 1394, 2142, 2182
AfeI AGCGCT 1 cut(s) 1541
AflIII ACRYGT 1 cut(s) 1204
AgsI TTSAA 8 cut(s) 1796, 1910, 2324, 2405, 2755, 2848, 2891, 3043
AjuI GAANNNNNNNTTGG 1 cut(s) 34
AloI GAACNNNNNNTCC 4 cut(s) 1467, 1499, 2814, 2846
AluBI AGCT 8 cut(s) 239, 440, 962, 1010, 1219, 1772, 2999, 3051
AluI AGCT 8 cut(s) 239, 440, 962, 1010, 1219, 1772, 2999, 3051
Alw21I GWGCWC 3 cut(s) 1012, 1221, 1774
Alw26I GTCTC 4 cut(s) 1688, 1947, 2285, 2579
AlwI GGATC 7 cut(s) 627, 886, 899, 1140, 1721, 2450, 2864
AlwNI CAGNNNCTG 1 cut(s) 1880
Ama87I CYCGRG 3 cut(s) 314, 2163, 2766
Aor13HI TCCGGA 1 cut(s) 1516
Aor51HI AGCGCT 1 cut(s) 1541
ApaI GGGCCC 1 cut(s) 2315
ApeKI GCWGC 7 cut(s) 236, 440, 907, 1556, 2653, 2936, 2958
ApoI RAATTY 3 cut(s) 701, 716, 760
ArsI GACNNNNNNTTYG 4 cut(s) 1463, 1467, 1495, 1499
Asp700I GAANNNNTTC 1 cut(s) 17
Asp718I GGTACC 1 cut(s) 1267
AspA2I CCTAGG 1 cut(s) 1622
AspLEI GCGC 6 cut(s) 651, 858, 1169, 1542, 1933, 2467
AsuC2I CCSGG 1 cut(s) 667
AsuHPI GGTGA 8 cut(s) 155, 269, 373, 950, 2116, 2144, 2357, 2705
AsuNHI GCTAGC 1 cut(s) 436
AvaI CYCGRG 3 cut(s) 314, 2163, 2766
AvrII CCTAGG 1 cut(s) 1622
AxyI CCTNAGG 2 cut(s) 2574, 2618
BaeGI GKGCMC 2 cut(s) 2269, 2315
BalI TGGCCA 1 cut(s) 770
BamHI GGATCC 1 cut(s) 891
BanI GGYRCC 5 cut(s) 250, 1267, 1930, 2264, 2464
BanII GRGCYC 4 cut(s) 1012, 1221, 1774, 2315
BauI CACGAG 1 cut(s) 1616
BbsI GAAGAC 2 cut(s) 401, 1704
Bbv12I GWGCWC 3 cut(s) 1012, 1221, 1774
BbvCI CCTCAGC 3 cut(s) 1734, 1873, 2205
BbvI GCAGC 7 cut(s) 248, 427, 894, 1568, 2665, 2923, 2970
BceAI ACGGC 1 cut(s) 210
BcgI CGANNNNNNTGC 6 cut(s) 460, 494, 1403, 1437, 2984, 3018
BciVI GTATCC 1 cut(s) 1599
BcnI CCSGG 1 cut(s) 667
BcoDI GTCTC 4 cut(s) 1688, 1947, 2285, 2579
BfaI CTAG 6 cut(s) 423, 437, 1083, 1623, 1904, 3000
BfmI CTRYAG 6 cut(s) 908, 1881, 1953, 2651, 2904, 3068
BfoI RGCGCY 3 cut(s) 1543, 1934, 2468
BfuAI ACCTGC 2 cut(s) 238, 1470
BfuI GTATCC 1 cut(s) 1599
BglI GCCNNNNNGGC 2 cut(s) 1154, 2990
BlnI CCTAGG 1 cut(s) 1622
BmeT110I CYCGRG 3 cut(s) 314, 2163, 2766
BmrI ACTGGG 2 cut(s) 1116, 1255
BmsI GCATC 7 cut(s) 14, 184, 358, 631, 1047, 1922, 1969
BmtI GCTAGC 1 cut(s) 440
BmuI ACTGGG 2 cut(s) 1116, 1255
BoxI GACNNNNGTC 1 cut(s) 2297
BpiI GAAGAC 2 cut(s) 401, 1704
BplI GAGNNNNNCTC 4 cut(s) 493, 525, 1529, 1561
BpmI CTGGAG 3 cut(s) 451, 942, 1663
Bpu10I CCTNAGC 4 cut(s) 1734, 1856, 1873, 2205
BpuEI CTTGAG 1 cut(s) 1556
BpuMI CCSGG 1 cut(s) 667
Bsa29I ATCGAT 2 cut(s) 27, 393
BsaBI GATNNNNATC 2 cut(s) 1610, 1725
BsaHI GRCGYC 2 cut(s) 1931, 2465
BsaWI WCCGGW 2 cut(s) 486, 1516
BsaXI ACNNNNNCTCC 2 cut(s) 295, 325
Bse118I RCCGGY 1 cut(s) 2713
Bse1I ACTGG 5 cut(s) 302, 754, 986, 1122, 1261
Bse21I CCTNAGG 2 cut(s) 2574, 2618
Bse8I GATNNNNATC 2 cut(s) 1610, 1725
BseAI TCCGGA 1 cut(s) 1516
BseCI ATCGAT 2 cut(s) 27, 393
BseGI GGATG 7 cut(s) 5, 219, 373, 523, 641, 2542, 2592
BseJI GATNNNNATC 2 cut(s) 1610, 1725
BseNI ACTGG 5 cut(s) 302, 754, 986, 1122, 1261
BseRI GAGGAG 7 cut(s) 125, 1086, 1327, 1706, 1996, 2201, 2511
BseSI GKGCMC 2 cut(s) 2269, 2315
BseX3I CGGCCG 1 cut(s) 2715
BseXI GCAGC 7 cut(s) 248, 427, 894, 1568, 2665, 2923, 2970
BseYI CCCAGC 1 cut(s) 1048
BsgI GTGCAG 2 cut(s) 414, 646
Bsh1285I CGRYCG 4 cut(s) 181, 1768, 2221, 2718
BshNI GGYRCC 5 cut(s) 250, 1267, 1930, 2264, 2464
BshVI ATCGAT 2 cut(s) 27, 393
BsiEI CGRYCG 4 cut(s) 181, 1768, 2221, 2718
BsiHKAI GWGCWC 3 cut(s) 1012, 1221, 1774
BsiHKCI CYCGRG 3 cut(s) 314, 2163, 2766
BsiSI CCGG 4 cut(s) 487, 667, 1517, 2714
BslFI GGGAC 4 cut(s) 150, 213, 288, 1472
BsmAI GTCTC 4 cut(s) 1688, 1947, 2285, 2579
BsmBI CGTCTC 1 cut(s) 1947
BsmFI GGGAC 4 cut(s) 150, 213, 288, 1472
BsmI GAATGC 3 cut(s) 59, 692, 1821
BsoBI CYCGRG 3 cut(s) 314, 2163, 2766
Bsp120I GGGCCC 1 cut(s) 2311
Bsp1286I GDGCHC 5 cut(s) 1012, 1221, 1774, 2269, 2315
Bsp13I TCCGGA 1 cut(s) 1516
Bsp19I CCATGG 1 cut(s) 2341
Bsp68I TCGCGA 2 cut(s) 177, 2602
BspDI ATCGAT 2 cut(s) 27, 393
BspEI TCCGGA 1 cut(s) 1516
BspMAI CTGCAG 3 cut(s) 912, 1885, 2655
BspMI ACCTGC 2 cut(s) 238, 1470
BspOI GCTAGC 1 cut(s) 440
BspPI GGATC 7 cut(s) 627, 886, 899, 1140, 1721, 2450, 2864
BspQI GCTCTTC 1 cut(s) 246
BspT107I GGYRCC 5 cut(s) 250, 1267, 1930, 2264, 2464
BsrBI CCGCTC 1 cut(s) 446
BsrFI RCCGGY 1 cut(s) 2713
BsrI ACTGG 5 cut(s) 302, 754, 986, 1122, 1261
BssAI RCCGGY 1 cut(s) 2713
BssNI GRCGYC 2 cut(s) 1931, 2465
BssSI CACGAG 1 cut(s) 1616
BssT1I CCWWGG 6 cut(s) 278, 755, 802, 1376, 1622, 2341
Bst2BI CACGAG 1 cut(s) 1616
Bst4CI ACNGT 5 cut(s) 307, 1454, 2227, 2258, 2299
Bst6I CTCTTC 6 cut(s) 246, 932, 1484, 1779, 1941, 2127
BstACI GRCGYC 2 cut(s) 1931, 2465
BstC8I GCNNGC 5 cut(s) 438, 1243, 1756, 2701, 2816
BstDSI CCRYGG 3 cut(s) 1926, 2341, 2376
BstENI CCTNNNNNAGG 3 cut(s) 1309, 1645, 1859
BstF5I GGATG 7 cut(s) 5, 219, 373, 523, 641, 2542, 2592
BstH2I RGCGCY 3 cut(s) 1543, 1934, 2468
BstHHI GCGC 6 cut(s) 651, 858, 1169, 1542, 1933, 2467
BstMAI GTCTC 4 cut(s) 1688, 1947, 2285, 2579
BstMCI CGRYCG 4 cut(s) 181, 1768, 2221, 2718
BstPAI GACNNNNGTC 1 cut(s) 2297
BstSFI CTRYAG 6 cut(s) 908, 1881, 1953, 2651, 2904, 3068
BstSLI GKGCMC 2 cut(s) 2269, 2315
BstV1I GCAGC 7 cut(s) 248, 427, 894, 1568, 2665, 2923, 2970
BstV2I GAAGAC 2 cut(s) 401, 1704
BstX2I RGATCY 3 cut(s) 632, 891, 1726
BstYI RGATCY 3 cut(s) 632, 891, 1726
BstZI CGGCCG 1 cut(s) 2715
Bsu15I ATCGAT 2 cut(s) 27, 393
Bsu36I CCTNAGG 2 cut(s) 2574, 2618
BsuI GTATCC 1 cut(s) 1599
BsuTUI ATCGAT 2 cut(s) 27, 393
BtgI CCRYGG 3 cut(s) 1926, 2341, 2376
BtgZI GCGATG 1 cut(s) 1578
BtsCI GGATG 7 cut(s) 5, 219, 373, 523, 641, 2542, 2592
BtsI GCAGTG 3 cut(s) 771, 1740, 1878
BtsIMutI CAGTG 6 cut(s) 45, 771, 1129, 1197, 1740, 1878
BtuMI TCGCGA 2 cut(s) 177, 2602
BveI ACCTGC 2 cut(s) 238, 1470
Cac8I GCNNGC 5 cut(s) 438, 1243, 1756, 2701, 2816
CaiI CAGNNNCTG 1 cut(s) 1880
CfoI GCGC 6 cut(s) 651, 858, 1169, 1542, 1933, 2467
Cfr10I RCCGGY 1 cut(s) 2713
Cfr42I CCGCGG 1 cut(s) 2379
ClaI ATCGAT 2 cut(s) 27, 393
CseI GACGC 1 cut(s) 1586
Csp6I GTAC 5 cut(s) 1042, 1268, 1393, 2141, 2181
CviAII CATG 8 cut(s) 79, 566, 1469, 1501, 1718, 2015, 2342, 3055
CviQI GTAC 5 cut(s) 1042, 1268, 1393, 2141, 2181
DinI GGCGCC 2 cut(s) 1932, 2466
DraI TTTAAA 1 cut(s) 2796
EaeI YGGCCR 2 cut(s) 768, 2715
EagI CGGCCG 1 cut(s) 2715
Eam1104I CTCTTC 6 cut(s) 246, 932, 1484, 1779, 1941, 2127
EarI CTCTTC 6 cut(s) 246, 932, 1484, 1779, 1941, 2127
EciI GGCGGA 2 cut(s) 212, 2460
Ecl136II GAGCTC 3 cut(s) 1010, 1219, 1772
EclXI CGGCCG 1 cut(s) 2715
Eco130I CCWWGG 6 cut(s) 278, 755, 802, 1376, 1622, 2341
Eco147I AGGCCT 1 cut(s) 2119
Eco24I GRGCYC 4 cut(s) 1012, 1221, 1774, 2315
Eco47III AGCGCT 1 cut(s) 1541
Eco52I CGGCCG 1 cut(s) 2715
Eco53kI GAGCTC 3 cut(s) 1010, 1219, 1772
Eco57I CTGAAG 1 cut(s) 2964
Eco81I CCTNAGG 2 cut(s) 2574, 2618
Eco88I CYCGRG 3 cut(s) 314, 2163, 2766
EcoICRI GAGCTC 3 cut(s) 1010, 1219, 1772
EcoNI CCTNNNNNAGG 3 cut(s) 1309, 1645, 1859
EcoO109I RGGNCCY 8 cut(s) 164, 1459, 1970, 2210, 2311, 2312, 2570, 2863
EcoRI GAATTC 2 cut(s) 701, 760
EcoT14I CCWWGG 6 cut(s) 278, 755, 802, 1376, 1622, 2341
EcoT38I GRGCYC 4 cut(s) 1012, 1221, 1774, 2315
EgeI GGCGCC 2 cut(s) 1932, 2466
EheI GGCGCC 2 cut(s) 1932, 2466
ErhI CCWWGG 6 cut(s) 278, 755, 802, 1376, 1622, 2341
Esp3I CGTCTC 1 cut(s) 1947
FaeI CATG 8 cut(s) 82, 569, 1472, 1504, 1721, 2018, 2345, 3058
FaqI GGGAC 4 cut(s) 150, 213, 288, 1472
FatI CATG 8 cut(s) 78, 565, 1468, 1500, 1717, 2014, 2341, 3054
FauI CCCGC 6 cut(s) 1575, 1660, 1738, 2383, 2708, 2811
FblI GTMKAC 2 cut(s) 121, 1410
FokI GGATG 6 cut(s) 206, 380, 530, 628, 2549, 2579
FriOI GRGCYC 4 cut(s) 1012, 1221, 1774, 2315
FspBI CTAG 6 cut(s) 423, 437, 1083, 1623, 1904, 3000
GlaI GCGC 6 cut(s) 650, 857, 1168, 1541, 1932, 2466
GsaI CCCAGC 1 cut(s) 1052
GsuI CTGGAG 3 cut(s) 451, 942, 1663
HaeII RGCGCY 3 cut(s) 1543, 1934, 2468
HapII CCGG 4 cut(s) 487, 667, 1517, 2714
HgaI GACGC 1 cut(s) 1586
HhaI GCGC 6 cut(s) 651, 858, 1169, 1542, 1933, 2467
Hin1I GRCGYC 2 cut(s) 1931, 2465
Hin1II CATG 8 cut(s) 82, 569, 1472, 1504, 1721, 2018, 2345, 3058
Hin6I GCGC 6 cut(s) 649, 856, 1167, 1540, 1931, 2465
HinP1I GCGC 6 cut(s) 649, 856, 1167, 1540, 1931, 2465
HincII GTYRAC 3 cut(s) 122, 1411, 2711
HindII GTYRAC 3 cut(s) 122, 1411, 2711
HpaII CCGG 4 cut(s) 487, 667, 1517, 2714
HphI GGTGA 8 cut(s) 155, 269, 373, 950, 2116, 2144, 2357, 2705
Hpy166II GTNNAC 7 cut(s) 122, 1127, 1356, 1411, 1450, 2431, 2711
Hpy8I GTNNAC 7 cut(s) 122, 1127, 1356, 1411, 1450, 2431, 2711
Hpy99I CGWCG 7 cut(s) 311, 936, 1167, 1415, 1784, 2141, 2303
HpyAV CCTTC 5 cut(s) 895, 1159, 1593, 2535, 2632
HpyCH4III ACNGT 5 cut(s) 307, 1454, 2227, 2258, 2299
HpyCH4IV ACGT 3 cut(s) 996, 2139, 2707
HpySE526I ACGT 3 cut(s) 996, 2139, 2707
Hsp92I GRCGYC 2 cut(s) 1931, 2465
Hsp92II CATG 8 cut(s) 82, 569, 1472, 1504, 1721, 2018, 2345, 3058
HspAI GCGC 6 cut(s) 649, 856, 1167, 1540, 1931, 2465
KasI GGCGCC 2 cut(s) 1930, 2464
KflI GGGWCCC 1 cut(s) 164
Kpn2I TCCGGA 1 cut(s) 1516
KpnI GGTACC 1 cut(s) 1271
KspI CCGCGG 1 cut(s) 2379
LguI GCTCTTC 1 cut(s) 246
LmnI GCTCC 6 cut(s) 316, 839, 1015, 1644, 2011, 2335
Lsp1109I GCAGC 7 cut(s) 248, 427, 894, 1568, 2665, 2923, 2970
LweI GCATC 7 cut(s) 14, 184, 358, 631, 1047, 1922, 1969
MaeI CTAG 6 cut(s) 423, 437, 1083, 1623, 1904, 3000
MaeII ACGT 3 cut(s) 996, 2139, 2707
MaeIII GTNAC 3 cut(s) 671, 2132, 2515
MbiI CCGCTC 1 cut(s) 446
MflI RGATCY 3 cut(s) 632, 891, 1726
MhlI GDGCHC 5 cut(s) 1012, 1221, 1774, 2269, 2315
MlsI TGGCCA 1 cut(s) 770
MluI ACGCGT 1 cut(s) 1204
MluNI TGGCCA 1 cut(s) 770
Mly113I GGCGCC 2 cut(s) 1931, 2465
MlyI GAGTC 5 cut(s) 166, 1357, 1718, 1997, 2613
MmeI TCCRAC 4 cut(s) 762, 1572, 2201, 2865
Mox20I TGGCCA 1 cut(s) 770
MroI TCCGGA 1 cut(s) 1516
MroXI GAANNNNTTC 1 cut(s) 17
MscI TGGCCA 1 cut(s) 770
MseI TTAA 2 cut(s) 2670, 2795
MslI CAYNNNNRTG 1 cut(s) 2019
Msp20I TGGCCA 1 cut(s) 770
MspA1I CMGCKG 3 cut(s) 962, 1733, 2378
MspI CCGG 4 cut(s) 487, 667, 1517, 2714
Mva1269I GAATGC 3 cut(s) 59, 692, 1821
NarI GGCGCC 2 cut(s) 1931, 2465
NciI CCSGG 1 cut(s) 667
NcoI CCATGG 1 cut(s) 2341
NheI GCTAGC 1 cut(s) 436
NlaIII CATG 8 cut(s) 82, 569, 1472, 1504, 1721, 2018, 2345, 3058
NmeAIII GCCGAG 1 cut(s) 2332
NmuCI GTSAC 2 cut(s) 671, 2132
NruI TCGCGA 2 cut(s) 177, 2602
PaeR7I CTCGAG 2 cut(s) 2163, 2766
PaqCI CACCTGC 1 cut(s) 238
PceI AGGCCT 1 cut(s) 2119
PciSI GCTCTTC 1 cut(s) 246
PcsI WCGNNNNNNNCGW 3 cut(s) 1410, 1479, 1594
PctI GAATGC 3 cut(s) 59, 692, 1821
PdmI GAANNNNTTC 1 cut(s) 17
PfoI TCCNGGA 1 cut(s) 696
Ple19I CGATCG 2 cut(s) 181, 1768
PleI GAGTC 5 cut(s) 165, 1356, 1717, 1997, 2612
PluTI GGCGCC 2 cut(s) 1934, 2468
PpsI GAGTC 5 cut(s) 165, 1356, 1717, 1997, 2612
PpuMI RGGWCCY 6 cut(s) 164, 1459, 1970, 2210, 2570, 2863
PshAI GACNNNNGTC 1 cut(s) 2297
Psp124BI GAGCTC 3 cut(s) 1012, 1221, 1774
Psp5II RGGWCCY 6 cut(s) 164, 1459, 1970, 2210, 2570, 2863
PspFI CCCAGC 1 cut(s) 1048
PspOMI GGGCCC 1 cut(s) 2311
PspPPI RGGWCCY 6 cut(s) 164, 1459, 1970, 2210, 2570, 2863
PstI CTGCAG 3 cut(s) 912, 1885, 2655
PstNI CAGNNNCTG 1 cut(s) 1880
PsuI RGATCY 3 cut(s) 632, 891, 1726
PvuI CGATCG 2 cut(s) 181, 1768
PvuII CAGCTG 1 cut(s) 962
RruI TCGCGA 2 cut(s) 177, 2602
RsaI GTAC 5 cut(s) 1043, 1269, 1394, 2142, 2182
RsaNI GTAC 5 cut(s) 1042, 1268, 1393, 2141, 2181
RseI CAYNNNNRTG 1 cut(s) 2019
SacI GAGCTC 3 cut(s) 1012, 1221, 1774
SacII CCGCGG 1 cut(s) 2379
SalI GTCGAC 2 cut(s) 120, 1409
SapI GCTCTTC 1 cut(s) 246
SaqAI TTAA 2 cut(s) 2670, 2795
SchI GAGTC 5 cut(s) 166, 1357, 1718, 1997, 2613
SduI GDGCHC 5 cut(s) 1012, 1221, 1774, 2269, 2315
SfaNI GCATC 7 cut(s) 14, 184, 358, 631, 1047, 1922, 1969
SfcI CTRYAG 6 cut(s) 908, 1881, 1953, 2651, 2904, 3068
SfiI GGCCNNNNNGGCC 1 cut(s) 2990
SfoI GGCGCC 2 cut(s) 1932, 2466
Sfr274I CTCGAG 2 cut(s) 2163, 2766
Sfr303I CCGCGG 1 cut(s) 2379
SgrBI CCGCGG 1 cut(s) 2379
SlaI CTCGAG 2 cut(s) 2163, 2766
SmiMI CAYNNNNRTG 1 cut(s) 2019
SmlI CTYRAG 3 cut(s) 1535, 2163, 2766
SmoI CTYRAG 3 cut(s) 1535, 2163, 2766
SseBI AGGCCT 1 cut(s) 2119
SspDI GGCGCC 2 cut(s) 1930, 2464
SspI AATATT 2 cut(s) 325, 656
SspMI CTAG 6 cut(s) 423, 437, 1083, 1623, 1904, 3000
SstI GAGCTC 3 cut(s) 1012, 1221, 1774
StuI AGGCCT 1 cut(s) 2119
StyI CCWWGG 6 cut(s) 278, 755, 802, 1376, 1622, 2341
TaaI ACNGT 5 cut(s) 307, 1454, 2227, 2258, 2299
TaiI ACGT 3 cut(s) 999, 2142, 2710
TaqII GACCGA 1 cut(s) 2207
TatI WGTACW 1 cut(s) 1041
Tru1I TTAA 2 cut(s) 2670, 2795
Tru9I TTAA 2 cut(s) 2670, 2795
TscAI CASTG 6 cut(s) 52, 778, 1129, 1204, 1747, 1885
TseFI GTSAC 2 cut(s) 671, 2132
TseI GCWGC 7 cut(s) 236, 440, 907, 1556, 2653, 2936, 2958
Tsp45I GTSAC 2 cut(s) 671, 2132
TspDTI ATGAA 9 cut(s) 54, 1737, 2031, 2124, 2255, 2424, 2700, 2940, 3043
TspGWI ACGGA 6 cut(s) 120, 920, 1435, 1817, 1929, 2401
TspRI CASTG 6 cut(s) 52, 778, 1129, 1204, 1747, 1885
XagI CCTNNNNNAGG 3 cut(s) 1309, 1645, 1859
XapI RAATTY 3 cut(s) 701, 716, 760
XcmI CCANNNNNNNNNTGG 1 cut(s) 1177
XhoI CTCGAG 2 cut(s) 2163, 2766
XmaJI CCTAGG 1 cut(s) 1622
XmiI GTMKAC 2 cut(s) 121, 1410
XmnI GAANNNNTTC 1 cut(s) 17
XspI CTAG 6 cut(s) 423, 437, 1083, 1623, 1904, 3000
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.