Rmu_ssc0000134.1_g000054

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000134.1
OG0000214
Physical Location & Seq
Reverse (-)
195229 .. 196437
1209 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000134.1_g000054.1.cds

Sequence Viewer

Length: 1050 bp
atggcatccaagaaaccattcgttatcgatcaggcatatgaaatcactgagaaggccgcattcacctggagaactaacatgggtgttcgatgtagaagtcagaccagtgaggagcgaagtcgactgatgggctttggtggagttgatagtcaagcaagtctgggtcccacacctcgagatcgtttgccggatgatgctatggcctattataggcttcccatccgccgtcccatagcggctctttggcaagtgcccggcgattttagtagttggggaccaagaaggaaagtgggcttctggcctaccatcattcccgaggaaaatatttggtatcaggaggtccgagctagagatttggcccgatgggatgcggtgggtatcaatcaaaccatcgatctatgcttctgtcttccccataatactagccctgcaccgctagtcgcccctctttgcttttggaacacctccagcagtacattcgatttctggtttgggcagatgagcataactctgctggatgttcttaccatcacggggttgcccattgattttgacccctatgtgcatggtcagtttgatggcattcaatttcctttgagaatggctatggctggtcggggacatcacagcaaatcctactcattttggcgcaactgttactggacccagcgtgaccatacaagaggccctagaattctctggccactgctctctataatggtatttgcgttggccttgggcaacctgtattggatttatttccctcgctttcatcgctgtgatattccaaatgaacctccagtcgattcccttttagggaactgcctttgctgcaacttaaggtatcgagctccaccctactccgagtgttttatttacttgtacttgctgaaagagatgtcggacccaaaaatagtcctttctaggcgattccctcctccccttgatgatggctttctgctcggtggacgggatcatagcgaaagagcttcatggcctttcgtcgcgccatccctagcttggatattcatcttgccaccgaccgcgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

349

Amino Acids

40.2

Weight (kDa)

8.51

Isoelectric Point (pI)

48.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000214)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0079611
rosa_multiflora Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha Rh3DG208400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 121
AccII CGCG 2 cut(s) 1007, 1046
AciI CCGC 6 cut(s) 57, 223, 236, 371, 434, 1044
AclWI GGATC 1 cut(s) 981
AcoI YGGCCR 1 cut(s) 701
AcsI RAATTY 1 cut(s) 693
AfaI GTAC 2 cut(s) 475, 884
AfiI CCNNNNNNNGG 4 cut(s) 210, 534, 816, 1020
AflII CTTAAG 1 cut(s) 838
AgsI TTSAA 1 cut(s) 587
AjnI CCWGG 1 cut(s) 65
AjuI GAANNNNNNNTTGG 1 cut(s) 34
AluBI AGCT 4 cut(s) 347, 851, 989, 1019
AluI AGCT 4 cut(s) 347, 851, 989, 1019
Alw21I GWGCWC 1 cut(s) 853
AlwI GGATC 1 cut(s) 981
Ama87I CYCGRG 2 cut(s) 174, 314
AoxI GGCC 8 cut(s) 54, 201, 299, 357, 685, 701, 732, 995
ApeKI GCWGC 1 cut(s) 831
ApoI RAATTY 1 cut(s) 693
Asp700I GAANNNNTTC 1 cut(s) 17
AspLEI GCGC 2 cut(s) 651, 1009
AspS9I GGNCC 7 cut(s) 164, 275, 340, 358, 663, 686, 904
AsuC2I CCSGG 1 cut(s) 255
AsuHPI GGTGA 1 cut(s) 55
AvaI CYCGRG 2 cut(s) 174, 314
AvaII GGWCC 5 cut(s) 164, 275, 340, 663, 904
BaeGI GKGCMC 1 cut(s) 255
BalI TGGCCA 1 cut(s) 703
BanII GRGCYC 1 cut(s) 853
BbsI GAAGAC 1 cut(s) 401
Bbv12I GWGCWC 1 cut(s) 853
BbvI GCAGC 1 cut(s) 818
BccI CCATC 9 cut(s) 121, 227, 314, 357, 398, 536, 572, 944, 1018
BceAI ACGGC 1 cut(s) 210
BcgI CGANNNNNNTGC 2 cut(s) 460, 494
BciT130I CCWGG 1 cut(s) 67
BcnI CCSGG 1 cut(s) 255
BfaI CTAG 6 cut(s) 348, 423, 437, 690, 924, 1016
BfrI CTTAAG 1 cut(s) 838
BisI GCNGC 3 cut(s) 57, 237, 832
BlsI GCNGC 3 cut(s) 58, 238, 833
Bme1390I CCNGG 2 cut(s) 67, 255
Bme18I GGWCC 5 cut(s) 164, 275, 340, 663, 904
BmeT110I CYCGRG 2 cut(s) 174, 314
BmgT120I GGNCC 7 cut(s) 164, 275, 340, 358, 663, 686, 904
BmiI GGNNCC 5 cut(s) 165, 166, 276, 665, 906
BmrFI CCNGG 2 cut(s) 67, 255
BmsI GCATC 3 cut(s) 14, 184, 358
BpiI GAAGAC 1 cut(s) 401
BplI GAGNNNNNCTC 2 cut(s) 493, 525
BpmI CTGGAG 3 cut(s) 88, 451, 783
BpuMI CCSGG 1 cut(s) 255
Bsa29I ATCGAT 2 cut(s) 27, 393
BsaBI GATNNNNATC 1 cut(s) 1028
BsaJI CCNNGG 2 cut(s) 315, 735
Bsc4I CCNNNNNNNGG 4 cut(s) 210, 534, 816, 1020
Bse1I ACTGG 3 cut(s) 105, 665, 800
Bse8I GATNNNNATC 1 cut(s) 1028
BseBI CCWGG 1 cut(s) 67
BseCI ATCGAT 2 cut(s) 27, 393
BseDI CCNNGG 2 cut(s) 315, 735
BseGI GGATG 6 cut(s) 5, 196, 219, 373, 523, 1010
BseJI GATNNNNATC 1 cut(s) 1028
BseLI CCNNNNNNNGG 4 cut(s) 210, 534, 816, 1020
BseMII CTCAG 1 cut(s) 39
BseNI ACTGG 3 cut(s) 105, 665, 800
BseRI GAGGAG 2 cut(s) 125, 927
BseSI GKGCMC 1 cut(s) 255
BseXI GCAGC 1 cut(s) 818
BseYI CCCAGC 1 cut(s) 666
BsgI GTGCAG 1 cut(s) 414
Bsh1236I CGCG 2 cut(s) 1007, 1046
Bsh1285I CGRYCG 1 cut(s) 1044
BshFI GGCC 8 cut(s) 56, 203, 301, 359, 687, 703, 734, 997
BshVI ATCGAT 2 cut(s) 27, 393
BsiEI CGRYCG 1 cut(s) 1044
BsiHKAI GWGCWC 1 cut(s) 853
BsiHKCI CYCGRG 2 cut(s) 174, 314
BsiSI CCGG 2 cut(s) 188, 255
BslFI GGGAC 4 cut(s) 150, 213, 288, 633
BslI CCNNNNNNNGG 4 cut(s) 210, 534, 816, 1020
BsmFI GGGAC 4 cut(s) 150, 213, 288, 633
BsmI GAATGC 2 cut(s) 59, 582
BsnI GGCC 8 cut(s) 56, 203, 301, 359, 687, 703, 734, 997
BsoBI CYCGRG 2 cut(s) 174, 314
Bsp1286I GDGCHC 2 cut(s) 255, 853
Bsp143I GATC 4 cut(s) 28, 178, 394, 973
BspACI CCGC 6 cut(s) 57, 223, 236, 371, 434, 1044
BspANI GGCC 8 cut(s) 56, 203, 301, 359, 687, 703, 734, 997
BspCNI CTCAG 1 cut(s) 40
BspDI ATCGAT 2 cut(s) 27, 393
BspFNI CGCG 2 cut(s) 1007, 1046
BspLI GGNNCC 5 cut(s) 165, 166, 276, 665, 906
BspPI GGATC 1 cut(s) 981
BspTI CTTAAG 1 cut(s) 838
BsrI ACTGG 3 cut(s) 105, 665, 800
BssECI CCNNGG 2 cut(s) 315, 735
BssMI GATC 4 cut(s) 28, 178, 394, 973
BssT1I CCWWGG 1 cut(s) 735
Bst2UI CCWGG 1 cut(s) 67
Bst4CI ACNGT 1 cut(s) 656
BstAFI CTTAAG 1 cut(s) 838
BstDEI CTNAG 1 cut(s) 48
BstENI CCTNNNNNAGG 1 cut(s) 208
BstF5I GGATG 6 cut(s) 5, 196, 219, 373, 523, 1010
BstFNI CGCG 2 cut(s) 1007, 1046
BstHHI GCGC 2 cut(s) 651, 1009
BstKTI GATC 4 cut(s) 31, 181, 397, 976
BstMBI GATC 4 cut(s) 28, 178, 394, 973
BstMCI CGRYCG 1 cut(s) 1044
BstMWI GCNNNNNNNGC 2 cut(s) 774, 831
BstNI CCWGG 1 cut(s) 67
BstSCI CCNGG 2 cut(s) 65, 253
BstSLI GKGCMC 1 cut(s) 255
BstUI CGCG 2 cut(s) 1007, 1046
BstV1I GCAGC 1 cut(s) 818
BstV2I GAAGAC 1 cut(s) 401
Bsu15I ATCGAT 2 cut(s) 27, 393
BsuRI GGCC 8 cut(s) 56, 203, 301, 359, 687, 703, 734, 997
BsuTUI ATCGAT 2 cut(s) 27, 393
BtgZI GCGATG 1 cut(s) 758
BtsCI GGATG 6 cut(s) 5, 196, 219, 373, 523, 1010
BtsI GCAGTG 1 cut(s) 704
BtsIMutI CAGTG 3 cut(s) 45, 112, 704
CfoI GCGC 2 cut(s) 651, 1009
Cfr13I GGNCC 7 cut(s) 164, 275, 340, 358, 663, 686, 904
ClaI ATCGAT 2 cut(s) 27, 393
Csp6I GTAC 2 cut(s) 474, 883
CviAII CATG 3 cut(s) 79, 566, 993
CviQI GTAC 2 cut(s) 474, 883
DdeI CTNAG 1 cut(s) 48
DpnI GATC 4 cut(s) 30, 180, 396, 975
DpnII GATC 4 cut(s) 28, 178, 394, 973
EaeI YGGCCR 1 cut(s) 701
EciI GGCGGA 1 cut(s) 212
Ecl136II GAGCTC 1 cut(s) 851
Eco130I CCWWGG 1 cut(s) 735
Eco24I GRGCYC 1 cut(s) 853
Eco47I GGWCC 5 cut(s) 164, 275, 340, 663, 904
Eco53kI GAGCTC 1 cut(s) 851
Eco88I CYCGRG 2 cut(s) 174, 314
EcoICRI GAGCTC 1 cut(s) 851
EcoNI CCTNNNNNAGG 1 cut(s) 208
EcoO109I RGGNCCY 2 cut(s) 164, 686
EcoRI GAATTC 1 cut(s) 693
EcoRII CCWGG 1 cut(s) 65
EcoT14I CCWWGG 1 cut(s) 735
EcoT38I GRGCYC 1 cut(s) 853
ErhI CCWWGG 1 cut(s) 735
FaeI CATG 3 cut(s) 82, 569, 996
FaqI GGGAC 4 cut(s) 150, 213, 288, 633
FatI CATG 3 cut(s) 78, 565, 992
FauNDI CATATG 1 cut(s) 37
FblI GTMKAC 1 cut(s) 121
Fnu4HI GCNGC 3 cut(s) 57, 237, 832
FokI GGATG 5 cut(s) 203, 206, 380, 530, 997
FriOI GRGCYC 1 cut(s) 853
Fsp4HI GCNGC 3 cut(s) 57, 237, 832
FspBI CTAG 6 cut(s) 348, 423, 437, 690, 924, 1016
GlaI GCGC 2 cut(s) 650, 1008
GluI GCNGC 3 cut(s) 57, 237, 832
GsaI CCCAGC 1 cut(s) 670
GsuI CTGGAG 3 cut(s) 88, 451, 783
HaeIII GGCC 8 cut(s) 56, 203, 301, 359, 687, 703, 734, 997
HapII CCGG 2 cut(s) 188, 255
HhaI GCGC 2 cut(s) 651, 1009
Hin1II CATG 3 cut(s) 82, 569, 996
Hin6I GCGC 2 cut(s) 649, 1007
HinP1I GCGC 2 cut(s) 649, 1007
HincII GTYRAC 1 cut(s) 122
HindII GTYRAC 1 cut(s) 122
HinfI GANTC 2 cut(s) 806, 930
HpaII CCGG 2 cut(s) 188, 255
HphI GGTGA 1 cut(s) 55
Hpy166II GTNNAC 2 cut(s) 122, 968
Hpy188I TCNGA 4 cut(s) 102, 344, 865, 904
Hpy188III TCNNGA 3 cut(s) 176, 314, 335
Hpy8I GTNNAC 2 cut(s) 122, 968
Hpy99I CGWCG 1 cut(s) 1007
HpyAV CCTTC 2 cut(s) 46, 276
HpyCH4III ACNGT 1 cut(s) 656
HpyCH4V TGCA 3 cut(s) 431, 565, 834
HpyF10VI GCNNNNNNNGC 2 cut(s) 774, 831
HpyF3I CTNAG 1 cut(s) 48
Hsp92II CATG 3 cut(s) 82, 569, 996
HspAI GCGC 2 cut(s) 649, 1007
KflI GGGWCCC 1 cut(s) 164
Kzo9I GATC 4 cut(s) 28, 178, 394, 973
LmnI GCTCC 2 cut(s) 112, 856
Lsp1109I GCAGC 1 cut(s) 818
LweI GCATC 3 cut(s) 14, 184, 358
MaeI CTAG 6 cut(s) 348, 423, 437, 690, 924, 1016
MaeIII GTNAC 2 cut(s) 656, 671
MalI GATC 4 cut(s) 30, 180, 396, 975
MboI GATC 4 cut(s) 28, 178, 394, 973
MboII GAAGA 1 cut(s) 401
MhlI GDGCHC 2 cut(s) 255, 853
MlsI TGGCCA 1 cut(s) 703
MluCI AATT 2 cut(s) 587, 693
MluNI TGGCCA 1 cut(s) 703
MmeI TCCRAC 1 cut(s) 882
Mox20I TGGCCA 1 cut(s) 703
MroXI GAANNNNTTC 1 cut(s) 17
MscI TGGCCA 1 cut(s) 703
MseI TTAA 1 cut(s) 839
MslI CAYNNNNRTG 1 cut(s) 777
Msp20I TGGCCA 1 cut(s) 703
MspCI CTTAAG 1 cut(s) 838
MspI CCGG 2 cut(s) 188, 255
MspR9I CCNGG 2 cut(s) 67, 255
Mva1269I GAATGC 2 cut(s) 59, 582
MvaI CCWGG 1 cut(s) 67
MvnI CGCG 2 cut(s) 1007, 1046
MwoI GCNNNNNNNGC 2 cut(s) 774, 831
NciI CCSGG 1 cut(s) 255
NdeI CATATG 1 cut(s) 37
NdeII GATC 4 cut(s) 28, 178, 394, 973
NlaIII CATG 3 cut(s) 82, 569, 996
NlaIV GGNNCC 5 cut(s) 165, 166, 276, 665, 906
NmuCI GTSAC 1 cut(s) 671
PaeR7I CTCGAG 1 cut(s) 174
PctI GAATGC 2 cut(s) 59, 582
PdmI GAANNNNTTC 1 cut(s) 17
PfeI GAWTC 2 cut(s) 806, 930
PkrI GCNGC 3 cut(s) 58, 238, 833
PpuMI RGGWCCY 1 cut(s) 164
Psp124BI GAGCTC 1 cut(s) 853
Psp5II RGGWCCY 1 cut(s) 164
Psp6I CCWGG 1 cut(s) 65
PspFI CCCAGC 1 cut(s) 666
PspGI CCWGG 1 cut(s) 65
PspN4I GGNNCC 5 cut(s) 165, 166, 276, 665, 906
PspPI GGNCC 7 cut(s) 164, 275, 340, 358, 663, 686, 904
PspPPI RGGWCCY 1 cut(s) 164
RsaI GTAC 2 cut(s) 475, 884
RsaNI GTAC 2 cut(s) 474, 883
RseI CAYNNNNRTG 1 cut(s) 777
SacI GAGCTC 1 cut(s) 853
SalI GTCGAC 1 cut(s) 120
SaqAI TTAA 1 cut(s) 839
SatI GCNGC 3 cut(s) 57, 237, 832
Sau3AI GATC 4 cut(s) 28, 178, 394, 973
Sau96I GGNCC 7 cut(s) 164, 275, 340, 358, 663, 686, 904
ScrFI CCNGG 2 cut(s) 67, 255
SduI GDGCHC 2 cut(s) 255, 853
SfaNI GCATC 3 cut(s) 14, 184, 358
Sfr274I CTCGAG 1 cut(s) 174
SinI GGWCC 5 cut(s) 164, 275, 340, 663, 904
SlaI CTCGAG 1 cut(s) 174
SmiMI CAYNNNNRTG 1 cut(s) 777
SmlI CTYRAG 2 cut(s) 174, 838
SmoI CTYRAG 2 cut(s) 174, 838
Sse9I AATT 2 cut(s) 587, 693
SsiI CCGC 6 cut(s) 57, 223, 236, 371, 434, 1044
SspI AATATT 1 cut(s) 325
SspMI CTAG 6 cut(s) 348, 423, 437, 690, 924, 1016
SstI GAGCTC 1 cut(s) 853
StyD4I CCNGG 2 cut(s) 65, 253
StyI CCWWGG 1 cut(s) 735
TaaI ACNGT 1 cut(s) 656
TaqI TCGA 8 cut(s) 27, 88, 121, 175, 393, 480, 804, 847
TasI AATT 2 cut(s) 587, 693
TatI WGTACW 2 cut(s) 473, 882
TauI GCSGC 2 cut(s) 59, 239
TfiI GAWTC 2 cut(s) 806, 930
Tru1I TTAA 1 cut(s) 839
Tru9I TTAA 1 cut(s) 839
TscAI CASTG 3 cut(s) 52, 112, 711
TseFI GTSAC 1 cut(s) 671
TseI GCWGC 1 cut(s) 831
Tsp45I GTSAC 1 cut(s) 671
TspDTI ATGAA 5 cut(s) 54, 761, 807, 981, 1018
TspRI CASTG 3 cut(s) 52, 112, 711
Vha464I CTTAAG 1 cut(s) 838
VpaK11BI GGWCC 5 cut(s) 164, 275, 340, 663, 904
XagI CCTNNNNNAGG 1 cut(s) 208
XapI RAATTY 1 cut(s) 693
XcmI CCANNNNNNNNNTGG 1 cut(s) 1017
XhoI CTCGAG 1 cut(s) 174
XmiI GTMKAC 1 cut(s) 121
XmnI GAANNNNTTC 1 cut(s) 17
XspI CTAG 6 cut(s) 348, 423, 437, 690, 924, 1016
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.