Rmu_sc0002263.1_g000050

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002263.1
OG0000214
Physical Location & Seq
Forward (+)
200103 .. 202223
2121 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002263.1_g000050.1.cds

Sequence Viewer

Length: 1722 bp
atgtgccccttcgataccaacattagtggccctttctggatccccgccttttggctgcagatttatttccctcgcttccgtcgcggtgatattccaaaggattatccagtcgattcccttttgggaaattggctttgctgcaacgtaaggtatcgagctccaccctactccaagtgttttatttacttgtacttgctggaagagatgccggacctaaaaatagtcctttctaggcgattccctcatccccttgatgatggctttctgcccagtggacgggatcatagcgaaagagccctcctggcctttcgtcgagccatctcctgcttggatattcgtcttgccactgacctcgtaagcgacgagctctatgccgctaaccactttgctcgccaatttgggttggcccagttggtaccctggcctgtggttgattctgccaattactatacctcttggctgagattagccccgcctgggtctgccccctttcagagtcagtttactttgatagtgattccccctagggtcagagtgttgtaccccctcaacgatgttgacgatgattatgctgattggtggaaagaagtgtccgtgaactgttgggacctgccatatgacgaactcttcgccctgatctttcgttgcatgagtagtcctggtccggaggaccgcgagattcttgagcgcttctccaaccctgcagcacaacccccgcgacctattctacctactcgctcatcgcgtccagggatacaaatccacgagcctggggcaacaataagtttttatctttcttcaccattccttttccttgccgggaaacaaaaggcaatagcagaggagactcttgagggagagtcttctcatgatgaagatcccgctgaggccactactgtcttcgctcgcaaatgcgatcgagctcaattcgtcgaagagggttttgaagatgacgaacctctgggaatgccattggtaaactccggcccccgcttatcctatttaaattttagaatctgggcgggatgtcctaccattccaataacgatctccgatgacgactccctggagcatgaaagagtggaaagccactctgaggcttctgccgcttatgaggaactaatgacgacagagattcctgcggcactagaggtccaagaggtgaatgaagcggggcctcttcctcttgatccaaacccgctctctgacgtttctgaacctgacctggattctgtttgtaccaggaggtggtttgatgccgaagatctggccggcgggacgtacatcccaggtttgggggatgaggcgagcagtggtggtctcttgatttcgaaaatagacgtggcgagcgttgaggcagaaggttatgctctcggagctgcttgtttccaacactctactgatgaacctcacattgaatttctagagtctctcacgactgagatgtcggaccaagctcagggggtcattgagggaaattatgctgaagatgaaagaattgaggaaccaatcgaccctctagcattggtgacttatgatcgtactgtgaatcctccgcctcctcctcccactaggcttgaaaatctagctcgaatccttgaggaaactcctcctacagtagctgaactagcgaggacagagcttcgaaaccttttgggacagcggcggctggggcctgaagaactcctcaggatctgggaagccattgtgttccttcattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

573

Amino Acids

64.43

Weight (kDa)

4.46

Isoelectric Point (pI)

58.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000214)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0079611
rosa_multiflora Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha Rh3DG208400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1444
Acc36I ACCTGC 1 cut(s) 618
Acc65I GGTACC 1 cut(s) 415
AccB1I GGYRCC 1 cut(s) 415
AccB7I CCANNNNNTGG 1 cut(s) 1248
AccBSI CCGCTC 1 cut(s) 1201
AccII CGCG 4 cut(s) 84, 675, 718, 745
AccIII TCCGGA 1 cut(s) 664
AclWI GGATC 6 cut(s) 34, 47, 288, 872, 1184, 1700
AcoI YGGCCR 1 cut(s) 1269
AcsI RAATTY 2 cut(s) 1006, 1418
AcuI CTGAAG 2 cut(s) 1506, 1698
AfaI GTAC 6 cut(s) 191, 417, 542, 1240, 1283, 1543
AfeI AGCGCT 1 cut(s) 689
AfiI CCNNNNNNNGG 8 cut(s) 51, 276, 477, 1096, 1248, 1294, 1295, 1459
AgsI TTSAA 3 cut(s) 947, 1418, 1580
AjiI CACGTC 1 cut(s) 1342
AluBI AGCT 8 cut(s) 158, 367, 923, 1379, 1457, 1589, 1622, 1642
AluI AGCT 8 cut(s) 158, 367, 923, 1379, 1457, 1589, 1622, 1642
Alw21I GWGCWC 3 cut(s) 160, 369, 925
Alw26I GTCTC 3 cut(s) 839, 1325, 1434
AlwI GGATC 6 cut(s) 34, 47, 288, 872, 1184, 1700
AlwNI CAGNNNCTG 2 cut(s) 1622, 1695
Aor13HI TCCGGA 1 cut(s) 664
Aor51HI AGCGCT 1 cut(s) 689
AoxI GGCC 9 cut(s) 28, 303, 405, 422, 888, 985, 1175, 1269, 1673
ApeKI GCWGC 4 cut(s) 55, 138, 704, 1379
ApoI RAATTY 2 cut(s) 1006, 1418
ArsI GACNNNNNNTTYG 2 cut(s) 611, 643
Asp718I GGTACC 1 cut(s) 415
AspA2I CCTAGG 1 cut(s) 524
AspLEI GCGC 1 cut(s) 690
AsuC2I CCSGG 1 cut(s) 820
AsuHPI GGTGA 4 cut(s) 98, 792, 1174, 1540
AsuII TTCGAA 2 cut(s) 1331, 1645
AvaII GGWCC 6 cut(s) 211, 607, 662, 670, 1153, 1450
AvrII CCTAGG 1 cut(s) 524
AxyI CCTNAGG 1 cut(s) 1688
BaeGI GKGCMC 1 cut(s) 8
BamHI GGATCC 1 cut(s) 39
BanI GGYRCC 1 cut(s) 415
BanII GRGCYC 4 cut(s) 160, 298, 369, 925
BauI CACGAG 1 cut(s) 764
BbsI GAAGAC 2 cut(s) 855, 892
Bbv12I GWGCWC 3 cut(s) 160, 369, 925
BbvCI CCTCAGC 1 cut(s) 885
BbvI GCAGC 4 cut(s) 42, 125, 716, 1366
BccI CCATC 2 cut(s) 251, 326
BcgI CGANNNNNNTGC 4 cut(s) 353, 387, 551, 585
BciVI GTATCC 1 cut(s) 747
BcnI CCSGG 1 cut(s) 820
BcoDI GTCTC 3 cut(s) 839, 1325, 1434
BfaI CTAG 8 cut(s) 231, 525, 1148, 1424, 1520, 1572, 1586, 1628
BfmI CTRYAG 3 cut(s) 56, 702, 1614
BfoI RGCGCY 1 cut(s) 691
BfuAI ACCTGC 1 cut(s) 618
BfuI GTATCC 1 cut(s) 747
BglI GCCNNNNNGGC 1 cut(s) 302
BglII AGATCT 1 cut(s) 1264
BisI GCNGC 9 cut(s) 56, 139, 375, 705, 1107, 1143, 1380, 1664, 1667
BlnI CCTAGG 1 cut(s) 524
BlsI GCNGC 9 cut(s) 57, 140, 376, 706, 1108, 1144, 1381, 1665, 1668
Bme18I GGWCC 6 cut(s) 211, 607, 662, 670, 1153, 1450
BmgBI CACGTC 1 cut(s) 1342
BmiI GGNNCC 7 cut(s) 41, 417, 608, 988, 1176, 1506, 1674
BmrI ACTGGG 2 cut(s) 264, 403
BmsI GCATC 2 cut(s) 195, 1246
BmuI ACTGGG 2 cut(s) 264, 403
BpiI GAAGAC 2 cut(s) 855, 892
BplI GAGNNNNNCTC 2 cut(s) 677, 709
BpmI CTGGAG 1 cut(s) 1088
Bpu10I CCTNAGC 2 cut(s) 885, 1458
Bpu14I TTCGAA 2 cut(s) 1331, 1645
BpuEI CTTGAG 3 cut(s) 704, 872, 1619
BpuMI CCSGG 1 cut(s) 820
BsaBI GATNNNNATC 2 cut(s) 758, 876
BsaI GGTCTC 1 cut(s) 1325
BsaJI CCNNGG 7 cut(s) 419, 476, 524, 749, 770, 1065, 1288
BsaWI WCCGGW 1 cut(s) 664
Bsc4I CCNNNNNNNGG 8 cut(s) 51, 276, 477, 1096, 1248, 1294, 1295, 1459
Bse118I RCCGGY 1 cut(s) 1271
Bse1I ACTGG 3 cut(s) 107, 270, 409
Bse21I CCTNAGG 1 cut(s) 1688
Bse8I GATNNNNATC 2 cut(s) 758, 876
BseAI TCCGGA 1 cut(s) 664
BseDI CCNNGG 7 cut(s) 419, 476, 524, 749, 770, 1065, 1288
BseGI GGATG 4 cut(s) 244, 1031, 1284, 1306
BseJI GATNNNNATC 2 cut(s) 758, 876
BseLI CCNNNNNNNGG 8 cut(s) 51, 276, 477, 1096, 1248, 1294, 1295, 1459
BseMII CTCAG 6 cut(s) 452, 876, 1086, 1431, 1472, 1702
BseNI ACTGG 3 cut(s) 107, 270, 409
BseRI GAGGAG 5 cut(s) 857, 1551, 1554, 1599, 1676
BseSI GKGCMC 1 cut(s) 8
BseXI GCAGC 4 cut(s) 42, 125, 716, 1366
BseYI CCCAGC 1 cut(s) 1669
Bsh1236I CGCG 4 cut(s) 84, 675, 718, 745
Bsh1285I CGRYCG 1 cut(s) 919
BshFI GGCC 9 cut(s) 30, 305, 407, 424, 890, 987, 1177, 1271, 1675
BshNI GGYRCC 1 cut(s) 415
BsiEI CGRYCG 1 cut(s) 919
BsiHKAI GWGCWC 3 cut(s) 160, 369, 925
BsiSI CCGG 5 cut(s) 209, 665, 819, 984, 1272
BslFI GGGAC 3 cut(s) 620, 1291, 1671
BslI CCNNNNNNNGG 8 cut(s) 51, 276, 477, 1096, 1248, 1294, 1295, 1459
BsmAI GTCTC 3 cut(s) 839, 1325, 1434
BsmFI GGGAC 3 cut(s) 620, 1291, 1671
BsmI GAATGC 1 cut(s) 972
BsnI GGCC 9 cut(s) 30, 305, 407, 424, 890, 987, 1177, 1271, 1675
Bso31I GGTCTC 1 cut(s) 1325
Bsp119I TTCGAA 2 cut(s) 1331, 1645
Bsp1286I GDGCHC 5 cut(s) 8, 160, 298, 369, 925
Bsp13I TCCGGA 1 cut(s) 664
BspANI GGCC 9 cut(s) 30, 305, 407, 424, 890, 987, 1177, 1271, 1675
BspCNI CTCAG 6 cut(s) 453, 877, 1087, 1432, 1471, 1701
BspEI TCCGGA 1 cut(s) 664
BspFNI CGCG 4 cut(s) 84, 675, 718, 745
BspHI TCATGA 1 cut(s) 868
BspLI GGNNCC 7 cut(s) 41, 417, 608, 988, 1176, 1506, 1674
BspMAI CTGCAG 2 cut(s) 60, 706
BspMI ACCTGC 1 cut(s) 618
BspPI GGATC 6 cut(s) 34, 47, 288, 872, 1184, 1700
BspT104I TTCGAA 2 cut(s) 1331, 1645
BspT107I GGYRCC 1 cut(s) 415
BspTNI GGTCTC 1 cut(s) 1325
BsrBI CCGCTC 1 cut(s) 1201
BsrFI RCCGGY 1 cut(s) 1271
BsrI ACTGG 3 cut(s) 107, 270, 409
BssAI RCCGGY 1 cut(s) 1271
BssECI CCNNGG 7 cut(s) 419, 476, 524, 749, 770, 1065, 1288
BssSI CACGAG 1 cut(s) 764
BssT1I CCWWGG 1 cut(s) 524
Bst2BI CACGAG 1 cut(s) 764
Bst4CI ACNGT 4 cut(s) 602, 898, 1546, 1618
Bst6I CTCTTC 4 cut(s) 195, 632, 930, 1185
BstBI TTCGAA 2 cut(s) 1331, 1645
BstC8I GCNNGC 5 cut(s) 391, 907, 1273, 1309, 1348
BstDEI CTNAG 6 cut(s) 461, 885, 1095, 1440, 1458, 1688
BstF5I GGATG 4 cut(s) 244, 1031, 1284, 1306
BstFNI CGCG 4 cut(s) 84, 675, 718, 745
BstH2I RGCGCY 1 cut(s) 691
BstHHI GCGC 1 cut(s) 690
BstMAI GTCTC 3 cut(s) 839, 1325, 1434
BstMCI CGRYCG 1 cut(s) 919
BstMWI GCNNNNNNNGC 6 cut(s) 81, 302, 1106, 1376, 1628, 1672
BstSFI CTRYAG 3 cut(s) 56, 702, 1614
BstSLI GKGCMC 1 cut(s) 8
BstUI CGCG 4 cut(s) 84, 675, 718, 745
BstV1I GCAGC 4 cut(s) 42, 125, 716, 1366
BstV2I GAAGAC 2 cut(s) 855, 892
BstX2I RGATCY 4 cut(s) 39, 877, 1264, 1692
BstXI CCANNNNNNTGG 1 cut(s) 770
BstYI RGATCY 4 cut(s) 39, 877, 1264, 1692
Bsu36I CCTNAGG 1 cut(s) 1688
BsuI GTATCC 1 cut(s) 747
BsuRI GGCC 9 cut(s) 30, 305, 407, 424, 890, 987, 1177, 1271, 1675
BtgZI GCGATG 1 cut(s) 726
BtrI CACGTC 1 cut(s) 1342
BtsCI GGATG 4 cut(s) 244, 1031, 1284, 1306
BtsI GCAGTG 1 cut(s) 1318
BtsIMutI CAGTG 3 cut(s) 277, 345, 1318
BveI ACCTGC 1 cut(s) 618
Cac8I GCNNGC 5 cut(s) 391, 907, 1273, 1309, 1348
CaiI CAGNNNCTG 2 cut(s) 1622, 1695
CciI TCATGA 1 cut(s) 868
CfoI GCGC 1 cut(s) 690
Cfr10I RCCGGY 1 cut(s) 1271
CseI GACGC 1 cut(s) 734
Csp6I GTAC 6 cut(s) 190, 416, 541, 1239, 1282, 1542
CspCI CAANNNNNGTGG 4 cut(s) 7, 42, 1558, 1593
CviAII CATG 3 cut(s) 649, 869, 1073
CviQI GTAC 6 cut(s) 190, 416, 541, 1239, 1282, 1542
DdeI CTNAG 6 cut(s) 461, 885, 1095, 1440, 1458, 1688
DraI TTTAAA 1 cut(s) 1005
DrdI GACNNNNNNGTC 1 cut(s) 1444
DseDI GACNNNNNNGTC 1 cut(s) 1444
EaeI YGGCCR 1 cut(s) 1269
Eam1104I CTCTTC 4 cut(s) 195, 632, 930, 1185
EarI CTCTTC 4 cut(s) 195, 632, 930, 1185
EciI GGCGGA 1 cut(s) 1545
Ecl136II GAGCTC 3 cut(s) 158, 367, 923
Eco130I CCWWGG 1 cut(s) 524
Eco24I GRGCYC 4 cut(s) 160, 298, 369, 925
Eco31I GGTCTC 1 cut(s) 1325
Eco47I GGWCC 6 cut(s) 211, 607, 662, 670, 1153, 1450
Eco47III AGCGCT 1 cut(s) 689
Eco53kI GAGCTC 3 cut(s) 158, 367, 923
Eco57I CTGAAG 2 cut(s) 1506, 1698
Eco81I CCTNAGG 1 cut(s) 1688
EcoICRI GAGCTC 3 cut(s) 158, 367, 923
EcoO109I RGGNCCY 3 cut(s) 607, 1175, 1673
EcoT14I CCWWGG 1 cut(s) 524
EcoT38I GRGCYC 4 cut(s) 160, 298, 369, 925
ErhI CCWWGG 1 cut(s) 524
FaeI CATG 3 cut(s) 652, 872, 1076
FaqI GGGAC 3 cut(s) 620, 1291, 1671
FatI CATG 3 cut(s) 648, 868, 1072
FauI CCCGC 9 cut(s) 52, 480, 723, 889, 998, 1015, 1165, 1206, 1268
FauNDI CATATG 1 cut(s) 616
Fnu4HI GCNGC 9 cut(s) 56, 139, 375, 705, 1107, 1143, 1380, 1664, 1667
FokI GGATG 4 cut(s) 231, 1038, 1271, 1313
FriOI GRGCYC 4 cut(s) 160, 298, 369, 925
Fsp4HI GCNGC 9 cut(s) 56, 139, 375, 705, 1107, 1143, 1380, 1664, 1667
FspBI CTAG 8 cut(s) 231, 525, 1148, 1424, 1520, 1572, 1586, 1628
GlaI GCGC 1 cut(s) 689
GluI GCNGC 9 cut(s) 56, 139, 375, 705, 1107, 1143, 1380, 1664, 1667
GsaI CCCAGC 1 cut(s) 1673
GsuI CTGGAG 1 cut(s) 1088
HaeII RGCGCY 1 cut(s) 691
HaeIII GGCC 9 cut(s) 30, 305, 407, 424, 890, 987, 1177, 1271, 1675
HapII CCGG 5 cut(s) 209, 665, 819, 984, 1272
HgaI GACGC 1 cut(s) 734
HhaI GCGC 1 cut(s) 690
Hin1II CATG 3 cut(s) 652, 872, 1076
Hin6I GCGC 1 cut(s) 688
HinP1I GCGC 1 cut(s) 688
HincII GTYRAC 1 cut(s) 559
HindII GTYRAC 1 cut(s) 559
HpaII CCGG 5 cut(s) 209, 665, 819, 984, 1272
HphI GGTGA 4 cut(s) 98, 792, 1174, 1540
Hpy166II GTNNAC 5 cut(s) 275, 504, 559, 598, 979
Hpy188I TCNGA 8 cut(s) 495, 533, 1054, 1096, 1207, 1216, 1376, 1450
Hpy8I GTNNAC 5 cut(s) 275, 504, 559, 598, 979
Hpy99I CGWCG 4 cut(s) 84, 315, 365, 935
HpyAV CCTTC 2 cut(s) 19, 1355
HpyCH4III ACNGT 4 cut(s) 602, 898, 1546, 1618
HpyCH4IV ACGT 4 cut(s) 144, 1209, 1280, 1341
HpyCH4V TGCA 4 cut(s) 58, 141, 648, 704
HpyF10VI GCNNNNNNNGC 6 cut(s) 81, 302, 1106, 1376, 1628, 1672
HpyF3I CTNAG 6 cut(s) 461, 885, 1095, 1440, 1458, 1688
HpySE526I ACGT 4 cut(s) 144, 1209, 1280, 1341
Hsp92II CATG 3 cut(s) 652, 872, 1076
HspAI GCGC 1 cut(s) 688
Kpn2I TCCGGA 1 cut(s) 664
KpnI GGTACC 1 cut(s) 419
KroI GCCGGC 1 cut(s) 1271
KroNI GCCGGC 1 cut(s) 1273
LmnI GCTCC 3 cut(s) 163, 1069, 1376
Lsp1109I GCAGC 4 cut(s) 42, 125, 716, 1366
LweI GCATC 2 cut(s) 195, 1246
MaeI CTAG 8 cut(s) 231, 525, 1148, 1424, 1520, 1572, 1586, 1628
MaeII ACGT 4 cut(s) 144, 1209, 1280, 1341
MaeIII GTNAC 1 cut(s) 1528
MbiI CCGCTC 1 cut(s) 1201
MflI RGATCY 4 cut(s) 39, 877, 1264, 1692
MhlI GDGCHC 5 cut(s) 8, 160, 298, 369, 925
MluCI AATT 8 cut(s) 127, 395, 442, 926, 1006, 1418, 1477, 1497
MlyI GAGTC 5 cut(s) 505, 841, 869, 1055, 1436
MmeI TCCRAC 3 cut(s) 720, 1414, 1428
MroI TCCGGA 1 cut(s) 664
MroNI GCCGGC 1 cut(s) 1271
MseI TTAA 1 cut(s) 1004
MspA1I CMGCKG 2 cut(s) 884, 1663
MspI CCGG 5 cut(s) 209, 665, 819, 984, 1272
Mva1269I GAATGC 1 cut(s) 972
MvnI CGCG 4 cut(s) 84, 675, 718, 745
MwoI GCNNNNNNNGC 6 cut(s) 81, 302, 1106, 1376, 1628, 1672
NaeI GCCGGC 1 cut(s) 1273
NciI CCSGG 1 cut(s) 820
NdeI CATATG 1 cut(s) 616
NgoMIV GCCGGC 1 cut(s) 1271
NlaIII CATG 3 cut(s) 652, 872, 1076
NlaIV GGNNCC 7 cut(s) 41, 417, 608, 988, 1176, 1506, 1674
NmuCI GTSAC 1 cut(s) 1528
NspV TTCGAA 2 cut(s) 1331, 1645
PagI TCATGA 1 cut(s) 868
PcsI WCGNNNNNNNCGW 4 cut(s) 360, 558, 742, 1347
PctI GAATGC 1 cut(s) 972
PdiI GCCGGC 1 cut(s) 1273
PflMI CCANNNNNTGG 1 cut(s) 1248
PkrI GCNGC 9 cut(s) 57, 140, 376, 706, 1108, 1144, 1381, 1665, 1668
Ple19I CGATCG 1 cut(s) 919
PleI GAGTC 5 cut(s) 504, 841, 868, 1055, 1435
PpsI GAGTC 5 cut(s) 504, 841, 868, 1055, 1435
PpuMI RGGWCCY 1 cut(s) 607
Psp124BI GAGCTC 3 cut(s) 160, 369, 925
Psp5II RGGWCCY 1 cut(s) 607
PspFI CCCAGC 1 cut(s) 1669
PspN4I GGNNCC 7 cut(s) 41, 417, 608, 988, 1176, 1506, 1674
PspPPI RGGWCCY 1 cut(s) 607
PstI CTGCAG 2 cut(s) 60, 706
PstNI CAGNNNCTG 2 cut(s) 1622, 1695
PsuI RGATCY 4 cut(s) 39, 877, 1264, 1692
PvuI CGATCG 1 cut(s) 919
RsaI GTAC 6 cut(s) 191, 417, 542, 1240, 1283, 1543
RsaNI GTAC 6 cut(s) 190, 416, 541, 1239, 1282, 1542
SacI GAGCTC 3 cut(s) 160, 369, 925
SaqAI TTAA 1 cut(s) 1004
SatI GCNGC 9 cut(s) 56, 139, 375, 705, 1107, 1143, 1380, 1664, 1667
SchI GAGTC 5 cut(s) 505, 841, 869, 1055, 1436
SduI GDGCHC 5 cut(s) 8, 160, 298, 369, 925
SfaNI GCATC 2 cut(s) 195, 1246
SfcI CTRYAG 3 cut(s) 56, 702, 1614
SfuI TTCGAA 2 cut(s) 1331, 1645
SinI GGWCC 6 cut(s) 211, 607, 662, 670, 1153, 1450
SmiI ATTTAAAT 1 cut(s) 1005
SmlI CTYRAG 3 cut(s) 683, 851, 1598
SmoI CTYRAG 3 cut(s) 683, 851, 1598
Sse9I AATT 8 cut(s) 127, 395, 442, 926, 1006, 1418, 1477, 1497
SspMI CTAG 8 cut(s) 231, 525, 1148, 1424, 1520, 1572, 1586, 1628
SstI GAGCTC 3 cut(s) 160, 369, 925
StyI CCWWGG 1 cut(s) 524
SwaI ATTTAAAT 1 cut(s) 1005
TaaI ACNGT 4 cut(s) 602, 898, 1546, 1618
TaiI ACGT 4 cut(s) 147, 1212, 1283, 1344
TasI AATT 8 cut(s) 127, 395, 442, 926, 1006, 1418, 1477, 1497
TatI WGTACW 1 cut(s) 189
TauI GCSGC 5 cut(s) 377, 1109, 1145, 1666, 1669
Tru1I TTAA 1 cut(s) 1004
Tru9I TTAA 1 cut(s) 1004
TscAI CASTG 3 cut(s) 277, 352, 1318
TseFI GTSAC 1 cut(s) 1528
TseI GCWGC 4 cut(s) 55, 138, 704, 1379
Tsp45I GTSAC 1 cut(s) 1528
TspDTI ATGAA 6 cut(s) 888, 1089, 1182, 1419, 1506, 1706
TspGWI ACGGA 2 cut(s) 68, 583
TspRI CASTG 3 cut(s) 277, 352, 1318
Van91I CCANNNNNTGG 1 cut(s) 1248
VpaK11BI GGWCC 6 cut(s) 211, 607, 662, 670, 1153, 1450
XapI RAATTY 2 cut(s) 1006, 1418
XbaI TCTAGA 1 cut(s) 1423
XcmI CCANNNNNNNNNTGG 1 cut(s) 325
XmaJI CCTAGG 1 cut(s) 524
XspI CTAG 8 cut(s) 231, 525, 1148, 1424, 1520, 1572, 1586, 1628
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.