Rmu_sc0026989.1_g000005

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0026989.1
OG0000214
Physical Location & Seq
Forward (+)
14546 .. 17376
2831 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0026989.1_g000005.1.cds

Sequence Viewer

Length: 1839 bp
atgagcataactctgctggatgttcttaccatcacgggattgcccattgactttgacccctatgttcatggtcagtttgatggcattcaatttcctttgagaatggatatggctggtcgggggcatcgcagcaaatcctacccattctggtgcgactattactgcactcaacgtgaccacacaggaggtatcgcattcctggaattctggttttgcaaatttatcttttgcacttcttccaacaaacctactgggccctggaattctctggccactgctctctctacaatgatttatttcccttgcttccgtcgcggtgatattctaaaggatcctctagttgattaccttttggggaattgtctttgccgcaacgtaagcgaaagagccctcctagcctttcgtcgcgccatctcctgcttggatattcgtcttgccaccgaccgtgttgattctgccaattactatacttcttggcggagattagctttgcctaggtctgccccttttaagagtcagtttactttgataatgattccccctagggtcagaacgttgtaccccctcaacgatctagacgattattatgctgattggtggaaagaaatgtctgtgaactgttgggacttgtcatatgacgaactcttcgtcttaatctttcgtggcatgagtagtcttggtccggaggaccgcgagattcttgagcgcttctccaaccctacagtacaacccccgcaacctattctaccttctcgctcatcgcgtctagggatacaaatccacgagcttggggcaacagccaagaaacaaaaggcaatagcagaggagactcttgagggagagtcttctcatgatgaggatcccgctgaggtccgtcagaggatcactggtccctctcgcctcagcgaggctggatcctcggtctccgcgggggaaatggcctcttcgcaaattcaggcgcctctgcccccagcagtaccggtgccctttgtggtgatactggtttctaatgaggattctccagagcgtcttaacatgtccgttcccactgagctcccggctgatgatcgagtggtggaggagatccccgtgacaaatgaagttggacagtcgccccagagatggaaaatgatacggacggtggtggtgccccctcaagtctcacgaacaaatgagacagccgtcgaagctaagggctctgtgcttgaatctgctccacttgcccatggtgagccgcgagttgagttcccaaattcttccgctgttgaagagacagaccaacctgttgaagatgaagaaactgaggaagctgtccgccatttagcattggtggttcgtgatcctgcgttgcctccgccgcctcatcctcctcccaccagattcgagagattgatgagggtgttggaggtaactcctccttctgctgtggatgaggctaagatggtgcttcgcgaacatctaggtcctcaggtcttgaagcctggcttcctcccgcgagctcgcgacgctcgagaggctttgaataacctcacccgagaaatggacttctcccgcggtattttaaatgagcgagccatccgcatgctggaactacaaatccaaaggtccgacttcaaacttcggatcgaggacctccaagcccgtttagcctctgttaagaatgcgattgctgtagaagaagcccaactcgatgaacctttggctgcttttgaagaaatgggccgcaacctggcccatgttagagaacgggccattcaggccgaagctagtgccattgcagtgaacctccgattggaggaaatttgcttgaaattgagcttcgcgggccaatctctgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

612

Amino Acids

68.86

Weight (kDa)

5.19

Isoelectric Point (pI)

56.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000214)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0079611
rosa_multiflora Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha Rh3DG208400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 958, 982, 1147
AccIII TCCGGA 1 cut(s) 682
AclI AACGTT 1 cut(s) 554
AcoI YGGCCR 1 cut(s) 270
AcsI RAATTY 6 cut(s) 203, 218, 262, 951, 1252, 1800
AcyI GRCGYC 1 cut(s) 959
AfaI GTAC 3 cut(s) 560, 726, 978
AfeI AGCGCT 1 cut(s) 707
AfiI CCNNNNNNNGG 7 cut(s) 907, 1122, 1540, 1585, 1729, 1792, 1795
AflIII ACRYGT 1 cut(s) 1035
AgeI ACCGGT 1 cut(s) 979
AgsI TTSAA 9 cut(s) 89, 1208, 1268, 1289, 1477, 1522, 1615, 1712, 1810
AjnI CCWGG 4 cut(s) 198, 257, 1480, 1728
AjuI GAANNNNNNNTTGG 2 cut(s) 1775, 1807
AloI GAACNNNNNNTCC 2 cut(s) 1581, 1613
AluBI AGCT 8 cut(s) 488, 787, 1054, 1190, 1310, 1499, 1766, 1818
AluI AGCT 8 cut(s) 488, 787, 1054, 1190, 1310, 1499, 1766, 1818
Alw21I GWGCWC 2 cut(s) 1056, 1501
Alw26I GTCTC 5 cut(s) 821, 928, 1165, 1169, 1265
Ama87I CYCGRG 2 cut(s) 1509, 1533
Aor13HI TCCGGA 1 cut(s) 682
Aor51HI AGCGCT 1 cut(s) 707
AoxI GGCC 8 cut(s) 254, 270, 939, 1720, 1731, 1749, 1758, 1825
ApaI GGGCCC 1 cut(s) 258
ApeKI GCWGC 2 cut(s) 129, 1703
ApoI RAATTY 6 cut(s) 203, 218, 262, 951, 1252, 1800
ArsI GACNNNNNNTTYG 4 cut(s) 629, 633, 661, 665
AsiGI ACCGGT 1 cut(s) 979
AspA2I CCTAGG 2 cut(s) 494, 542
AspLEI GCGC 3 cut(s) 410, 708, 961
AsuC2I CCSGG 1 cut(s) 1058
AsuHPI GGTGA 4 cut(s) 329, 1006, 1241, 1522
AvaI CYCGRG 2 cut(s) 1509, 1533
AvaII GGWCC 7 cut(s) 680, 688, 871, 890, 1463, 1605, 1630
AvrII CCTAGG 2 cut(s) 494, 542
AxyI CCTNAGG 1 cut(s) 1467
BaeGI GKGCMC 3 cut(s) 258, 987, 1152
BalI TGGCCA 1 cut(s) 272
BamHI GGATCC 3 cut(s) 331, 859, 914
BanI GGYRCC 3 cut(s) 958, 982, 1147
BanII GRGCYC 5 cut(s) 258, 391, 1056, 1199, 1501
BauI CACGAG 1 cut(s) 782
BbsI GAAGAC 1 cut(s) 837
Bbv12I GWGCWC 2 cut(s) 1056, 1501
BbvCI CCTCAGC 2 cut(s) 867, 902
BbvI GCAGC 2 cut(s) 141, 1690
BccI CCATC 6 cut(s) 38, 74, 419, 1116, 1435, 1583
BceAI ACGGC 1 cut(s) 1166
BcgI CGANNNNNNTGC 4 cut(s) 569, 603, 1751, 1785
BciT130I CCWGG 4 cut(s) 200, 259, 1482, 1730
BciVI GTATCC 1 cut(s) 765
BcnI CCSGG 1 cut(s) 1058
BcoDI GTCTC 5 cut(s) 821, 928, 1165, 1169, 1265
BfaI CTAG 8 cut(s) 338, 395, 495, 543, 575, 767, 1460, 1767
BfmI CTRYAG 3 cut(s) 720, 1671, 1835
BfoI RGCGCY 2 cut(s) 709, 962
BfuI GTATCC 1 cut(s) 765
BglI GCCNNNNNGGC 1 cut(s) 1757
BisI GCNGC 6 cut(s) 130, 370, 1235, 1358, 1704, 1723
BlnI CCTAGG 2 cut(s) 494, 542
BlsI GCNGC 6 cut(s) 131, 371, 1236, 1359, 1705, 1724
Bme1390I CCNGG 5 cut(s) 200, 259, 1058, 1482, 1730
Bme18I GGWCC 7 cut(s) 680, 688, 871, 890, 1463, 1605, 1630
BmeT110I CYCGRG 2 cut(s) 1509, 1533
BmiI GGNNCC 8 cut(s) 256, 333, 861, 892, 916, 960, 984, 1149
BmrFI CCNGG 5 cut(s) 200, 259, 1058, 1482, 1730
BmrI ACTGGG 1 cut(s) 261
BmsI GCATC 1 cut(s) 133
BmuI ACTGGG 1 cut(s) 261
BoxI GACNNNNGTC 1 cut(s) 1181
BpiI GAAGAC 1 cut(s) 837
BplI GAGNNNNNCTC 3 cut(s) 27, 695, 727
BpmI CTGGAG 1 cut(s) 1005
Bpu10I CCTNAGC 3 cut(s) 867, 902, 1191
BpuEI CTTGAG 3 cut(s) 722, 854, 1140
BpuMI CCSGG 1 cut(s) 1058
BsaBI GATNNNNATC 2 cut(s) 776, 858
BsaHI GRCGYC 1 cut(s) 959
BsaI GGTCTC 1 cut(s) 928
BsaJI CCNNGG 7 cut(s) 257, 494, 542, 918, 927, 1225, 1552
BsaWI WCCGGW 2 cut(s) 682, 979
Bsc4I CCNNNNNNNGG 7 cut(s) 907, 1122, 1540, 1585, 1729, 1792, 1795
Bse118I RCCGGY 1 cut(s) 979
Bse1I ACTGG 3 cut(s) 256, 892, 1005
Bse21I CCTNAGG 1 cut(s) 1467
Bse3DI GCAATG 1 cut(s) 1773
Bse8I GATNNNNATC 2 cut(s) 776, 858
BseAI TCCGGA 1 cut(s) 682
BseBI CCWGG 4 cut(s) 200, 259, 1482, 1730
BseDI CCNNGG 7 cut(s) 257, 494, 542, 918, 927, 1225, 1552
BseGI GGATG 4 cut(s) 25, 1363, 1435, 1575
BseJI GATNNNNATC 2 cut(s) 776, 858
BseLI CCNNNNNNNGG 7 cut(s) 907, 1122, 1540, 1585, 1729, 1792, 1795
BseMI GCAATG 1 cut(s) 1773
BseMII CTCAG 5 cut(s) 858, 916, 1041, 1293, 1481
BseNI ACTGG 3 cut(s) 256, 892, 1005
BseRI GAGGAG 4 cut(s) 839, 1094, 1359, 1404
BseSI GKGCMC 3 cut(s) 258, 987, 1152
BseXI GCAGC 2 cut(s) 141, 1690
BseYI CCCAGC 1 cut(s) 970
BsgI GTGCAG 1 cut(s) 148
Bsh1285I CGRYCG 1 cut(s) 445
BshFI GGCC 8 cut(s) 256, 272, 941, 1722, 1733, 1751, 1760, 1827
BshNI GGYRCC 3 cut(s) 958, 982, 1147
BshTI ACCGGT 1 cut(s) 979
BsiEI CGRYCG 1 cut(s) 445
BsiHKAI GWGCWC 2 cut(s) 1056, 1501
BsiHKCI CYCGRG 2 cut(s) 1509, 1533
BsiSI CCGG 3 cut(s) 683, 980, 1058
BslFI GGGAC 2 cut(s) 638, 876
BslI CCNNNNNNNGG 7 cut(s) 907, 1122, 1540, 1585, 1729, 1792, 1795
BsmAI GTCTC 5 cut(s) 821, 928, 1165, 1169, 1265
BsmFI GGGAC 2 cut(s) 638, 876
BsmI GAATGC 3 cut(s) 84, 194, 1666
BsnI GGCC 8 cut(s) 256, 272, 941, 1722, 1733, 1751, 1760, 1827
Bso31I GGTCTC 1 cut(s) 928
BsoBI CYCGRG 2 cut(s) 1509, 1533
Bsp120I GGGCCC 1 cut(s) 254
Bsp1286I GDGCHC 7 cut(s) 258, 391, 987, 1056, 1152, 1199, 1501
Bsp13I TCCGGA 1 cut(s) 682
Bsp143I GATC 9 cut(s) 331, 571, 859, 882, 914, 1066, 1083, 1339, 1623
Bsp19I CCATGG 1 cut(s) 1225
Bsp68I TCGCGA 2 cut(s) 1452, 1503
BspANI GGCC 8 cut(s) 256, 272, 941, 1722, 1733, 1751, 1760, 1827
BspCNI CTCAG 5 cut(s) 859, 915, 1042, 1294, 1480
BspEI TCCGGA 1 cut(s) 682
BspHI TCATGA 1 cut(s) 850
BspLI GGNNCC 8 cut(s) 256, 333, 861, 892, 916, 960, 984, 1149
BspT107I GGYRCC 3 cut(s) 958, 982, 1147
BspTNI GGTCTC 1 cut(s) 928
BsrDI GCAATG 1 cut(s) 1773
BsrFI RCCGGY 1 cut(s) 979
BsrI ACTGG 3 cut(s) 256, 892, 1005
BssAI RCCGGY 1 cut(s) 979
BssECI CCNNGG 7 cut(s) 257, 494, 542, 918, 927, 1225, 1552
BssMI GATC 9 cut(s) 331, 571, 859, 882, 914, 1066, 1083, 1339, 1623
BssNI GRCGYC 1 cut(s) 959
BssSI CACGAG 1 cut(s) 782
BssT1I CCWWGG 3 cut(s) 494, 542, 1225
Bst2BI CACGAG 1 cut(s) 782
Bst2UI CCWGG 4 cut(s) 200, 259, 1482, 1730
Bst4CI ACNGT 5 cut(s) 446, 620, 724, 1110, 1141
Bst6I CTCTTC 3 cut(s) 650, 949, 1263
BstACI GRCGYC 1 cut(s) 959
BstC8I GCNNGC 5 cut(s) 1497, 1501, 1572, 1583, 1825
BstDEI CTNAG 7 cut(s) 867, 902, 1050, 1191, 1302, 1437, 1467
BstDSI CCRYGG 3 cut(s) 927, 1225, 1552
BstENI CCTNNNNNAGG 1 cut(s) 905
BstF5I GGATG 4 cut(s) 25, 1363, 1435, 1575
BstH2I RGCGCY 2 cut(s) 709, 962
BstHHI GCGC 3 cut(s) 410, 708, 961
BstKTI GATC 9 cut(s) 334, 574, 862, 885, 917, 1069, 1086, 1342, 1626
BstMAI GTCTC 5 cut(s) 821, 928, 1165, 1169, 1265
BstMBI GATC 9 cut(s) 331, 571, 859, 882, 914, 1066, 1083, 1339, 1623
BstMCI CGRYCG 1 cut(s) 445
BstNI CCWGG 4 cut(s) 200, 259, 1482, 1730
BstNSI RCATGY 2 cut(s) 1039, 1585
BstPAI GACNNNNGTC 1 cut(s) 1181
BstSCI CCNGG 5 cut(s) 198, 257, 1056, 1480, 1728
BstSFI CTRYAG 3 cut(s) 720, 1671, 1835
BstSLI GKGCMC 3 cut(s) 258, 987, 1152
BstV1I GCAGC 2 cut(s) 141, 1690
BstV2I GAAGAC 1 cut(s) 837
BstX2I RGATCY 4 cut(s) 331, 859, 914, 1083
BstXI CCANNNNNNTGG 1 cut(s) 788
BstYI RGATCY 4 cut(s) 331, 859, 914, 1083
Bsu36I CCTNAGG 1 cut(s) 1467
BsuI GTATCC 1 cut(s) 765
BsuRI GGCC 8 cut(s) 256, 272, 941, 1722, 1733, 1751, 1760, 1827
BtgI CCRYGG 3 cut(s) 927, 1225, 1552
BtgZI GCGATG 2 cut(s) 110, 744
BtsCI GGATG 4 cut(s) 25, 1363, 1435, 1575
BtsI GCAGTG 2 cut(s) 273, 1785
BtsIMutI CAGTG 4 cut(s) 273, 885, 1047, 1785
BtuMI TCGCGA 2 cut(s) 1452, 1503
Cac8I GCNNGC 5 cut(s) 1497, 1501, 1572, 1583, 1825
CciI TCATGA 1 cut(s) 850
CfoI GCGC 3 cut(s) 410, 708, 961
Cfr10I RCCGGY 1 cut(s) 979
Cfr42I CCGCGG 2 cut(s) 930, 1555
CseI GACGC 3 cut(s) 752, 1016, 1514
Csp6I GTAC 3 cut(s) 559, 725, 977
CspAI ACCGGT 1 cut(s) 979
CviAII CATG 7 cut(s) 68, 667, 851, 1036, 1226, 1582, 1736
CviQI GTAC 3 cut(s) 559, 725, 977
DdeI CTNAG 7 cut(s) 867, 902, 1050, 1191, 1302, 1437, 1467
DinI GGCGCC 1 cut(s) 960
DpnI GATC 9 cut(s) 333, 573, 861, 884, 916, 1068, 1085, 1341, 1625
DpnII GATC 9 cut(s) 331, 571, 859, 882, 914, 1066, 1083, 1339, 1623
DraI TTTAAA 1 cut(s) 1563
EaeI YGGCCR 1 cut(s) 270
Eam1104I CTCTTC 3 cut(s) 650, 949, 1263
EarI CTCTTC 3 cut(s) 650, 949, 1263
EciI GGCGGA 3 cut(s) 493, 1304, 1344
Ecl136II GAGCTC 2 cut(s) 1054, 1499
Eco130I CCWWGG 3 cut(s) 494, 542, 1225
Eco24I GRGCYC 5 cut(s) 258, 391, 1056, 1199, 1501
Eco31I GGTCTC 1 cut(s) 928
Eco47I GGWCC 7 cut(s) 680, 688, 871, 890, 1463, 1605, 1630
Eco47III AGCGCT 1 cut(s) 707
Eco53kI GAGCTC 2 cut(s) 1054, 1499
Eco81I CCTNAGG 1 cut(s) 1467
Eco88I CYCGRG 2 cut(s) 1509, 1533
EcoICRI GAGCTC 2 cut(s) 1054, 1499
EcoNI CCTNNNNNAGG 1 cut(s) 905
EcoO109I RGGNCCY 3 cut(s) 255, 1463, 1630
EcoRI GAATTC 2 cut(s) 203, 262
EcoRII CCWGG 4 cut(s) 198, 257, 1480, 1728
EcoT14I CCWWGG 3 cut(s) 494, 542, 1225
EcoT38I GRGCYC 5 cut(s) 258, 391, 1056, 1199, 1501
EgeI GGCGCC 1 cut(s) 960
EheI GGCGCC 1 cut(s) 960
ErhI CCWWGG 3 cut(s) 494, 542, 1225
FaeI CATG 7 cut(s) 71, 670, 854, 1039, 1229, 1585, 1739
FalI AAGNNNNNCTT 2 cut(s) 1469, 1501
FaqI GGGAC 2 cut(s) 638, 876
FatI CATG 7 cut(s) 67, 666, 850, 1035, 1225, 1581, 1735
FauI CCCGC 6 cut(s) 741, 871, 922, 1500, 1559, 1816
FauNDI CATATG 1 cut(s) 634
Fnu4HI GCNGC 6 cut(s) 130, 370, 1235, 1358, 1704, 1723
FokI GGATG 4 cut(s) 32, 1350, 1442, 1562
FriOI GRGCYC 5 cut(s) 258, 391, 1056, 1199, 1501
Fsp4HI GCNGC 6 cut(s) 130, 370, 1235, 1358, 1704, 1723
FspBI CTAG 8 cut(s) 338, 395, 495, 543, 575, 767, 1460, 1767
GlaI GCGC 3 cut(s) 409, 707, 960
GluI GCNGC 6 cut(s) 130, 370, 1235, 1358, 1704, 1723
GsaI CCCAGC 1 cut(s) 974
GsuI CTGGAG 1 cut(s) 1005
HaeII RGCGCY 2 cut(s) 709, 962
HaeIII GGCC 8 cut(s) 256, 272, 941, 1722, 1733, 1751, 1760, 1827
HapII CCGG 3 cut(s) 683, 980, 1058
HgaI GACGC 3 cut(s) 752, 1016, 1514
HhaI GCGC 3 cut(s) 410, 708, 961
Hin1I GRCGYC 1 cut(s) 959
Hin1II CATG 7 cut(s) 71, 670, 854, 1039, 1229, 1585, 1739
Hin6I GCGC 3 cut(s) 408, 706, 959
HinP1I GCGC 3 cut(s) 408, 706, 959
HinfI GANTC 9 cut(s) 452, 514, 535, 697, 829, 842, 1016, 1208, 1380
HpaII CCGG 3 cut(s) 683, 980, 1058
HphI GGTGA 4 cut(s) 329, 1006, 1241, 1522
Hpy166II GTNNAC 3 cut(s) 522, 616, 1783
Hpy188I TCNGA 5 cut(s) 551, 879, 1609, 1623, 1790
Hpy8I GTNNAC 3 cut(s) 522, 616, 1783
Hpy99I CGWCG 4 cut(s) 315, 408, 1187, 1508
HpyAV CCTTC 2 cut(s) 759, 1428
HpyCH4III ACNGT 5 cut(s) 446, 620, 724, 1110, 1141
HpyCH4IV ACGT 3 cut(s) 172, 375, 554
HpyCH4V TGCA 4 cut(s) 165, 216, 231, 1778
HpyF3I CTNAG 7 cut(s) 867, 902, 1050, 1191, 1302, 1437, 1467
HpySE526I ACGT 3 cut(s) 172, 375, 554
Hsp92I GRCGYC 1 cut(s) 959
Hsp92II CATG 7 cut(s) 71, 670, 854, 1039, 1229, 1585, 1739
HspAI GCGC 3 cut(s) 408, 706, 959
KasI GGCGCC 1 cut(s) 958
Kpn2I TCCGGA 1 cut(s) 682
KspI CCGCGG 2 cut(s) 930, 1555
Kzo9I GATC 9 cut(s) 331, 571, 859, 882, 914, 1066, 1083, 1339, 1623
LmnI GCTCC 2 cut(s) 1059, 1219
Lsp1109I GCAGC 2 cut(s) 141, 1690
LweI GCATC 1 cut(s) 133
MaeI CTAG 8 cut(s) 338, 395, 495, 543, 575, 767, 1460, 1767
MaeII ACGT 3 cut(s) 172, 375, 554
MaeIII GTNAC 3 cut(s) 173, 1090, 1408
MalI GATC 9 cut(s) 333, 573, 861, 884, 916, 1068, 1085, 1341, 1625
MboI GATC 9 cut(s) 331, 571, 859, 882, 914, 1066, 1083, 1339, 1623
MflI RGATCY 4 cut(s) 331, 859, 914, 1083
MhlI GDGCHC 7 cut(s) 258, 391, 987, 1056, 1152, 1199, 1501
MlsI TGGCCA 1 cut(s) 272
MluNI TGGCCA 1 cut(s) 272
Mly113I GGCGCC 1 cut(s) 959
MlyI GAGTC 3 cut(s) 523, 823, 851
MmeI TCCRAC 5 cut(s) 264, 738, 1084, 1383, 1632
Mox20I TGGCCA 1 cut(s) 272
MroI TCCGGA 1 cut(s) 682
MscI TGGCCA 1 cut(s) 272
MseI TTAA 5 cut(s) 510, 653, 1032, 1562, 1656
MslI CAYNNNNRTG 3 cut(s) 148, 1580, 1778
Msp20I TGGCCA 1 cut(s) 272
MspA1I CMGCKG 4 cut(s) 866, 929, 1262, 1554
MspI CCGG 3 cut(s) 683, 980, 1058
MspR9I CCNGG 5 cut(s) 200, 259, 1058, 1482, 1730
Mva1269I GAATGC 3 cut(s) 84, 194, 1666
MvaI CCWGG 4 cut(s) 200, 259, 1482, 1730
NarI GGCGCC 1 cut(s) 959
NciI CCSGG 1 cut(s) 1058
NcoI CCATGG 1 cut(s) 1225
NdeI CATATG 1 cut(s) 634
NdeII GATC 9 cut(s) 331, 571, 859, 882, 914, 1066, 1083, 1339, 1623
NlaIII CATG 7 cut(s) 71, 670, 854, 1039, 1229, 1585, 1739
NlaIV GGNNCC 8 cut(s) 256, 333, 861, 892, 916, 960, 984, 1149
NmuCI GTSAC 2 cut(s) 173, 1090
NruI TCGCGA 2 cut(s) 1452, 1503
NspI RCATGY 2 cut(s) 1039, 1585
PaeI GCATGC 1 cut(s) 1585
PaeR7I CTCGAG 1 cut(s) 1509
PagI TCATGA 1 cut(s) 850
PciI ACATGT 1 cut(s) 1035
PcsI WCGNNNNNNNCGW 4 cut(s) 576, 645, 760, 1507
PctI GAATGC 3 cut(s) 84, 194, 1666
PfeI GAWTC 6 cut(s) 452, 535, 697, 1016, 1208, 1380
PfoI TCCNGGA 1 cut(s) 198
PinAI ACCGGT 1 cut(s) 979
PkrI GCNGC 6 cut(s) 131, 371, 1236, 1359, 1705, 1724
PleI GAGTC 3 cut(s) 522, 823, 850
PluTI GGCGCC 1 cut(s) 962
PpsI GAGTC 3 cut(s) 522, 823, 850
PpuMI RGGWCCY 2 cut(s) 1463, 1630
PscI ACATGT 1 cut(s) 1035
PshAI GACNNNNGTC 1 cut(s) 1181
Psp124BI GAGCTC 2 cut(s) 1056, 1501
Psp1406I AACGTT 1 cut(s) 554
Psp5II RGGWCCY 2 cut(s) 1463, 1630
Psp6I CCWGG 4 cut(s) 198, 257, 1480, 1728
PspFI CCCAGC 1 cut(s) 970
PspGI CCWGG 4 cut(s) 198, 257, 1480, 1728
PspN4I GGNNCC 8 cut(s) 256, 333, 861, 892, 916, 960, 984, 1149
PspOMI GGGCCC 1 cut(s) 254
PspPPI RGGWCCY 2 cut(s) 1463, 1630
PsuI RGATCY 4 cut(s) 331, 859, 914, 1083
RruI TCGCGA 2 cut(s) 1452, 1503
RsaI GTAC 3 cut(s) 560, 726, 978
RsaNI GTAC 3 cut(s) 559, 725, 977
RseI CAYNNNNRTG 3 cut(s) 148, 1580, 1778
SacI GAGCTC 2 cut(s) 1056, 1501
SacII CCGCGG 2 cut(s) 930, 1555
SaqAI TTAA 5 cut(s) 510, 653, 1032, 1562, 1656
SatI GCNGC 6 cut(s) 130, 370, 1235, 1358, 1704, 1723
Sau3AI GATC 9 cut(s) 331, 571, 859, 882, 914, 1066, 1083, 1339, 1623
SchI GAGTC 3 cut(s) 523, 823, 851
ScrFI CCNGG 5 cut(s) 200, 259, 1058, 1482, 1730
SduI GDGCHC 7 cut(s) 258, 391, 987, 1056, 1152, 1199, 1501
SfaNI GCATC 1 cut(s) 133
SfcI CTRYAG 3 cut(s) 720, 1671, 1835
SfiI GGCCNNNNNGGCC 1 cut(s) 1757
SfoI GGCGCC 1 cut(s) 960
Sfr274I CTCGAG 1 cut(s) 1509
Sfr303I CCGCGG 2 cut(s) 930, 1555
SgrBI CCGCGG 2 cut(s) 930, 1555
SinI GGWCC 7 cut(s) 680, 688, 871, 890, 1463, 1605, 1630
SlaI CTCGAG 1 cut(s) 1509
SmiMI CAYNNNNRTG 3 cut(s) 148, 1580, 1778
SmlI CTYRAG 4 cut(s) 701, 833, 1155, 1509
SmoI CTYRAG 4 cut(s) 701, 833, 1155, 1509
SphI GCATGC 1 cut(s) 1585
SspDI GGCGCC 1 cut(s) 958
SspMI CTAG 8 cut(s) 338, 395, 495, 543, 575, 767, 1460, 1767
SstI GAGCTC 2 cut(s) 1056, 1501
StyD4I CCNGG 5 cut(s) 198, 257, 1056, 1480, 1728
StyI CCWWGG 3 cut(s) 494, 542, 1225
TaaI ACNGT 5 cut(s) 446, 620, 724, 1110, 1141
TaiI ACGT 3 cut(s) 175, 378, 557
TaqI TCGA 6 cut(s) 1069, 1185, 1383, 1510, 1626, 1689
TaqII GACCGA 1 cut(s) 910
TatI WGTACW 1 cut(s) 724
TauI GCSGC 4 cut(s) 372, 1237, 1360, 1725
TfiI GAWTC 6 cut(s) 452, 535, 697, 1016, 1208, 1380
Tru1I TTAA 5 cut(s) 510, 653, 1032, 1562, 1656
Tru9I TTAA 5 cut(s) 510, 653, 1032, 1562, 1656
TscAI CASTG 4 cut(s) 280, 892, 1054, 1785
TseFI GTSAC 2 cut(s) 173, 1090
TseI GCWGC 2 cut(s) 129, 1703
Tsp45I GTSAC 2 cut(s) 173, 1090
TspDTI ATGAA 4 cut(s) 56, 1113, 1308, 1707
TspGWI ACGGA 4 cut(s) 299, 863, 1030, 1150
TspRI CASTG 4 cut(s) 280, 892, 1054, 1785
VpaK11BI GGWCC 7 cut(s) 680, 688, 871, 890, 1463, 1605, 1630
XagI CCTNNNNNAGG 1 cut(s) 905
XapI RAATTY 6 cut(s) 203, 218, 262, 951, 1252, 1800
XbaI TCTAGA 1 cut(s) 574
XceI RCATGY 2 cut(s) 1039, 1585
XcmI CCANNNNNNNNNTGG 2 cut(s) 418, 1582
XhoI CTCGAG 1 cut(s) 1509
XmaJI CCTAGG 2 cut(s) 494, 542
XspI CTAG 8 cut(s) 338, 395, 495, 543, 575, 767, 1460, 1767
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.