Rmu_sc0000945.1_g000014

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000945.1
OG0000214
Physical Location & Seq
Reverse (-)
40472 .. 46333
5862 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000945.1_g000014.1.cds

Sequence Viewer

Length: 1806 bp
atggtatttgcgttggccttgggcaacctgtattggatttatttccctcgcttccgtcgcgatgatattccaaaggaacctccagtcgattcccttttggggaactggtttttccgcaatgtaaggtatcaagctcctccctactccgagtgttttatttacttgtacttgctggccatgggagagatgccggacccaaaaatagtcatttctaggcgtttccctcctccccttgacgatggctttctacccaatggacgggatcatagcgaaagagccctcctggcctttcgtcgcgccatctcctgcttggatattcgtcttgccaccgactgcgtaagttatgagctctatgcccctaaccacttcgctcgccaatttgggttggcccagttggccgggaaacaaaaggcaatagcagaggagacttctgagggagagtcttcgcatgatgaagatcctgctgaggccactgctgtatttgcttgcaaacgcgatcgagctcaattcgtcgaagagaattttgaagatgatgaacctctgggaatgcgactggtccgtcaaaggaccactgatccctctcgcctgagcgaggctggaccctcagccactgcagaagagccaattctctcgctagttcaagcatcaactaaccctgtggcaactctcccatctcccactacagagcatctgcaaggtcctaccatcctaataacgatttccgatgacaactcctcggagcatgaaagcgtggaaagccactctgaggcttctgccgcttatgaggaactgatgacgacagatattctagcggcactagaggtccaagagctgaatgaggtgaggcctcttcctcttggtgaccacgtaccagatattgacccgacagctcgaaaggattctgtttgtaccaaggaggtggcaacaaacactgagggtcctatcggcgggacagtcgccccagagatggaaaatgatactaacggtggtgatgccccccaagtctcgcaaacaaatgagacaaccgtcgaagctgagggctctgtgcttgaatctgctccaattgcccatggtgagtcgcgagttgagtttccagattcccctgaggctgaagggatagaccaacctgttgaagatgaagaaactgaggaagctgtccacccttttgcattggtggttcgtgatcctatggtgcctctgctgcctccccctcttaccagattcaagagattgatgagggtgttggaggtaactcctccttctgctatggatgaggctaaaatggtgcttcgcgaacatctgggtcctcaggtattggagactgacattctcccgcgagtcttagaagccctaaggtatctttgccaagagaaggtattgaccctgcagcaatttagtgcttttgatgatctgttgaatgaacttggtagggctcgccgccatcaatcggccgcgaacgcccaggctcacaatgctcgagaggctttgaataacctttccctagaaatggacatcccccgcggtattttaaatgagcgagccatccgcctgcgggaactacaaatccaaaggtctgacttcaaacttcggatcgaggatctccaagcccgtttagcctttgttgagaatgcgattgttgcagaagaagctcaactcgatgaacctttggctacttctgaagaaatgggccgcaacctggcccatatcagagatcgggccactcaggccgaagctggtgccattgcggcgaaacgccacgtggaggaactttgtttgaaattgatctttacaggccaatctttgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

601

Amino Acids

66.84

Weight (kDa)

4.66

Isoelectric Point (pI)

51.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000214)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0079611
rosa_multiflora Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha Rh3DG208400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 558
AccB1I GGYRCC 2 cut(s) 1192, 1736
AccII CGCG 8 cut(s) 60, 297, 495, 1081, 1293, 1336, 1454, 1521
AclWI GGATC 6 cut(s) 270, 452, 569, 1178, 1598, 1605
AcoI YGGCCR 3 cut(s) 174, 396, 1449
AcsI RAATTY 1 cut(s) 520
AcuI CTGAAG 2 cut(s) 1131, 1698
AcvI CACGTG 1 cut(s) 1759
AfaI GTAC 3 cut(s) 167, 870, 910
AgsI TTSAA 9 cut(s) 527, 641, 1052, 1133, 1225, 1417, 1489, 1582, 1777
AjnI CCWGG 3 cut(s) 282, 1461, 1695
AloI GAACNNNNNNTCC 2 cut(s) 1548, 1580
AluBI AGCT 9 cut(s) 134, 349, 503, 832, 890, 1034, 1154, 1649, 1733
AluI AGCT 9 cut(s) 134, 349, 503, 832, 890, 1034, 1154, 1649, 1733
Alw21I GWGCWC 2 cut(s) 351, 505
Alw26I GTCTC 4 cut(s) 419, 1009, 1013, 1313
AlwI GGATC 6 cut(s) 270, 452, 569, 1178, 1598, 1605
AlwNI CAGNNNCTG 1 cut(s) 611
Ama87I CYCGRG 1 cut(s) 1476
ApeKI GCWGC 2 cut(s) 1201, 1387
ApoI RAATTY 1 cut(s) 520
Asp700I GAANNNNTTC 1 cut(s) 898
AspLEI GCGC 1 cut(s) 299
AsuC2I CCSGG 1 cut(s) 400
AsuHPI GGTGA 4 cut(s) 853, 872, 1001, 1085
AvaI CYCGRG 1 cut(s) 1476
AvaII GGWCC 8 cut(s) 193, 556, 567, 599, 698, 823, 938, 1304
AxyI CCTNAGG 3 cut(s) 1104, 1308, 1352
BalI TGGCCA 1 cut(s) 176
BanI GGYRCC 2 cut(s) 1192, 1736
BanII GRGCYC 5 cut(s) 280, 351, 505, 1043, 1435
BbrPI CACGTG 1 cut(s) 1759
BbsI GAAGAC 1 cut(s) 435
Bbv12I GWGCWC 2 cut(s) 351, 505
BbvCI CCTCAGC 3 cut(s) 465, 604, 1035
BbvI GCAGC 2 cut(s) 1188, 1399
BccI CCATC 7 cut(s) 233, 308, 679, 713, 961, 1449, 1550
BcgI CGANNNNNNTGC 2 cut(s) 1718, 1752
BciT130I CCWGG 3 cut(s) 284, 1463, 1697
BcnI CCSGG 1 cut(s) 400
BcoDI GTCTC 4 cut(s) 419, 1009, 1013, 1313
BfaI CTAG 5 cut(s) 213, 635, 809, 818, 1502
BfmI CTRYAG 3 cut(s) 612, 681, 1385
BglI GCCNNNNNGGC 4 cut(s) 284, 395, 1724, 1745
BisI GCNGC 8 cut(s) 777, 813, 1202, 1388, 1438, 1452, 1690, 1746
BlsI GCNGC 8 cut(s) 778, 814, 1203, 1389, 1439, 1453, 1691, 1747
Bme1390I CCNGG 4 cut(s) 284, 400, 1463, 1697
Bme18I GGWCC 8 cut(s) 193, 556, 567, 599, 698, 823, 938, 1304
BmeT110I CYCGRG 1 cut(s) 1476
BmiI GGNNCC 7 cut(s) 78, 195, 601, 939, 1194, 1305, 1738
BmrFI CCNGG 4 cut(s) 284, 400, 1463, 1697
BmrI ACTGGG 1 cut(s) 385
BmsI GCATC 4 cut(s) 177, 653, 697, 982
BmuI ACTGGG 1 cut(s) 385
BoxI GACNNNNGTC 1 cut(s) 1025
BpiI GAAGAC 1 cut(s) 435
BpmI CTGGAG 1 cut(s) 66
Bpu10I CCTNAGC 4 cut(s) 465, 587, 604, 1035
BpuMI CCSGG 1 cut(s) 400
BsaAI YACGTR 2 cut(s) 868, 1759
BsaBI GATNNNNATC 1 cut(s) 456
BsaJI CCNNGG 7 cut(s) 18, 177, 735, 912, 1069, 1461, 1519
Bse1I ACTGG 4 cut(s) 83, 110, 391, 558
Bse21I CCTNAGG 3 cut(s) 1104, 1308, 1352
Bse3DI GCAATG 2 cut(s) 124, 1740
Bse8I GATNNNNATC 1 cut(s) 456
BseBI CCWGG 3 cut(s) 284, 1463, 1697
BseDI CCNNGG 7 cut(s) 18, 177, 735, 912, 1069, 1461, 1519
BseGI GGATG 4 cut(s) 705, 1276, 1512, 1542
BseJI GATNNNNATC 1 cut(s) 456
BseMI GCAATG 2 cut(s) 124, 1740
BseNI ACTGG 4 cut(s) 83, 110, 391, 558
BseRI GAGGAG 5 cut(s) 126, 216, 437, 724, 1245
BseX3I CGGCCG 1 cut(s) 1449
BseXI GCAGC 2 cut(s) 1188, 1399
Bsh1236I CGCG 8 cut(s) 60, 297, 495, 1081, 1293, 1336, 1454, 1521
Bsh1285I CGRYCG 2 cut(s) 499, 1452
BshNI GGYRCC 2 cut(s) 1192, 1736
BsiEI CGRYCG 2 cut(s) 499, 1452
BsiHKAI GWGCWC 2 cut(s) 351, 505
BsiHKCI CYCGRG 1 cut(s) 1476
BsiSI CCGG 2 cut(s) 191, 399
BslFI GGGAC 1 cut(s) 964
BsmAI GTCTC 4 cut(s) 419, 1009, 1013, 1313
BsmFI GGGAC 1 cut(s) 964
BsmI GAATGC 2 cut(s) 552, 1633
BsoBI CYCGRG 1 cut(s) 1476
Bsp1286I GDGCHC 5 cut(s) 280, 351, 505, 1043, 1435
Bsp19I CCATGG 2 cut(s) 177, 1069
Bsp68I TCGCGA 3 cut(s) 60, 1081, 1293
BspFNI CGCG 8 cut(s) 60, 297, 495, 1081, 1293, 1336, 1454, 1521
BspLI GGNNCC 7 cut(s) 78, 195, 601, 939, 1194, 1305, 1738
BspMAI CTGCAG 2 cut(s) 616, 1389
BspPI GGATC 6 cut(s) 270, 452, 569, 1178, 1598, 1605
BspQI GCTCTTC 1 cut(s) 612
BspT107I GGYRCC 2 cut(s) 1192, 1736
BsrDI GCAATG 2 cut(s) 124, 1740
BsrI ACTGG 4 cut(s) 83, 110, 391, 558
BssECI CCNNGG 7 cut(s) 18, 177, 735, 912, 1069, 1461, 1519
BssT1I CCWWGG 4 cut(s) 18, 177, 912, 1069
Bst2UI CCWGG 3 cut(s) 284, 1463, 1697
Bst4CI ACNGT 3 cut(s) 955, 986, 1027
Bst6I CTCTTC 3 cut(s) 510, 612, 855
BstBAI YACGTR 2 cut(s) 868, 1759
BstC8I GCNNGC 6 cut(s) 174, 373, 487, 1435, 1539, 1550
BstDSI CCRYGG 3 cut(s) 177, 1069, 1519
BstEII GGTNACC 1 cut(s) 860
BstENI CCTNNNNNAGG 1 cut(s) 590
BstF5I GGATG 4 cut(s) 705, 1276, 1512, 1542
BstFNI CGCG 8 cut(s) 60, 297, 495, 1081, 1293, 1336, 1454, 1521
BstHHI GCGC 1 cut(s) 299
BstMAI GTCTC 4 cut(s) 419, 1009, 1013, 1313
BstMCI CGRYCG 2 cut(s) 499, 1452
BstNI CCWGG 3 cut(s) 284, 1463, 1697
BstPAI GACNNNNGTC 1 cut(s) 1025
BstPI GGTNACC 1 cut(s) 860
BstSCI CCNGG 4 cut(s) 282, 398, 1461, 1695
BstSFI CTRYAG 3 cut(s) 612, 681, 1385
BstUI CGCG 8 cut(s) 60, 297, 495, 1081, 1293, 1336, 1454, 1521
BstV1I GCAGC 2 cut(s) 1188, 1399
BstV2I GAAGAC 1 cut(s) 435
BstX2I RGATCY 2 cut(s) 457, 1597
BstXI CCANNNNNNTGG 1 cut(s) 919
BstYI RGATCY 2 cut(s) 457, 1597
BstZI CGGCCG 1 cut(s) 1449
Bsu36I CCTNAGG 3 cut(s) 1104, 1308, 1352
BtgI CCRYGG 3 cut(s) 177, 1069, 1519
BtgZI GCGATG 1 cut(s) 75
BtsCI GGATG 4 cut(s) 705, 1276, 1512, 1542
BtsI GCAGTG 2 cut(s) 471, 609
BtsIMutI CAGTG 4 cut(s) 471, 570, 609, 930
BtuMI TCGCGA 3 cut(s) 60, 1081, 1293
Cac8I GCNNGC 6 cut(s) 174, 373, 487, 1435, 1539, 1550
CaiI CAGNNNCTG 1 cut(s) 611
CfoI GCGC 1 cut(s) 299
Cfr42I CCGCGG 1 cut(s) 1522
Csp6I GTAC 3 cut(s) 166, 869, 909
CviAII CATG 4 cut(s) 178, 449, 743, 1070
CviQI GTAC 3 cut(s) 166, 869, 909
DraI TTTAAA 1 cut(s) 1530
DrdI GACNNNNNNGTC 1 cut(s) 558
DseDI GACNNNNNNGTC 1 cut(s) 558
EaeI YGGCCR 3 cut(s) 174, 396, 1449
EagI CGGCCG 1 cut(s) 1449
Eam1104I CTCTTC 3 cut(s) 510, 612, 855
EarI CTCTTC 3 cut(s) 510, 612, 855
EciI GGCGGA 1 cut(s) 1535
Ecl136II GAGCTC 2 cut(s) 349, 503
EclXI CGGCCG 1 cut(s) 1449
Eco130I CCWWGG 4 cut(s) 18, 177, 912, 1069
Eco147I AGGCCT 1 cut(s) 847
Eco24I GRGCYC 5 cut(s) 280, 351, 505, 1043, 1435
Eco47I GGWCC 8 cut(s) 193, 556, 567, 599, 698, 823, 938, 1304
Eco52I CGGCCG 1 cut(s) 1449
Eco53kI GAGCTC 2 cut(s) 349, 503
Eco57I CTGAAG 2 cut(s) 1131, 1698
Eco72I CACGTG 1 cut(s) 1759
Eco81I CCTNAGG 3 cut(s) 1104, 1308, 1352
Eco88I CYCGRG 1 cut(s) 1476
Eco91I GGTNACC 1 cut(s) 860
EcoICRI GAGCTC 2 cut(s) 349, 503
EcoNI CCTNNNNNAGG 1 cut(s) 590
EcoO109I RGGNCCY 3 cut(s) 698, 938, 1304
EcoO65I GGTNACC 1 cut(s) 860
EcoRII CCWGG 3 cut(s) 282, 1461, 1695
EcoT14I CCWWGG 4 cut(s) 18, 177, 912, 1069
EcoT38I GRGCYC 5 cut(s) 280, 351, 505, 1043, 1435
ErhI CCWWGG 4 cut(s) 18, 177, 912, 1069
FaeI CATG 4 cut(s) 181, 452, 746, 1073
FaqI GGGAC 1 cut(s) 964
FatI CATG 4 cut(s) 177, 448, 742, 1069
FauI CCCGC 4 cut(s) 941, 1341, 1526, 1545
Fnu4HI GCNGC 8 cut(s) 777, 813, 1202, 1388, 1438, 1452, 1690, 1746
FokI GGATG 4 cut(s) 692, 1283, 1499, 1529
FriOI GRGCYC 5 cut(s) 280, 351, 505, 1043, 1435
Fsp4HI GCNGC 8 cut(s) 777, 813, 1202, 1388, 1438, 1452, 1690, 1746
FspBI CTAG 5 cut(s) 213, 635, 809, 818, 1502
GlaI GCGC 1 cut(s) 298
GluI GCNGC 8 cut(s) 777, 813, 1202, 1388, 1438, 1452, 1690, 1746
GsuI CTGGAG 1 cut(s) 66
HapII CCGG 2 cut(s) 191, 399
HhaI GCGC 1 cut(s) 299
Hin1II CATG 4 cut(s) 181, 452, 746, 1073
Hin6I GCGC 1 cut(s) 297
HinP1I GCGC 1 cut(s) 297
HinfI GANTC 8 cut(s) 89, 440, 899, 1052, 1076, 1097, 1221, 1338
HpaII CCGG 2 cut(s) 191, 399
HphI GGTGA 4 cut(s) 853, 872, 1001, 1085
Hpy166II GTNNAC 1 cut(s) 1159
Hpy188I TCNGA 9 cut(s) 148, 433, 724, 739, 766, 1576, 1590, 1678, 1709
Hpy188III TCNNGA 7 cut(s) 59, 1080, 1094, 1181, 1225, 1292, 1478
Hpy8I GTNNAC 1 cut(s) 1159
Hpy99I CGWCG 4 cut(s) 60, 297, 515, 1031
HpyAV CCTTC 3 cut(s) 1106, 1269, 1366
HpyCH4III ACNGT 3 cut(s) 955, 986, 1027
HpyCH4IV ACGT 2 cut(s) 867, 1758
HpyCH4V TGCA 6 cut(s) 489, 614, 694, 1169, 1387, 1640
HpySE526I ACGT 2 cut(s) 867, 1758
Hsp92II CATG 4 cut(s) 181, 452, 746, 1073
HspAI GCGC 1 cut(s) 297
KspI CCGCGG 1 cut(s) 1522
LguI GCTCTTC 1 cut(s) 612
LmnI GCTCC 3 cut(s) 139, 739, 1063
Lsp1109I GCAGC 2 cut(s) 1188, 1399
LweI GCATC 4 cut(s) 177, 653, 697, 982
MaeI CTAG 5 cut(s) 213, 635, 809, 818, 1502
MaeII ACGT 2 cut(s) 867, 1758
MaeIII GTNAC 2 cut(s) 860, 1249
MfeI CAATTG 1 cut(s) 1062
MflI RGATCY 2 cut(s) 457, 1597
MhlI GDGCHC 5 cut(s) 280, 351, 505, 1043, 1435
MlsI TGGCCA 1 cut(s) 176
MluCI AATT 7 cut(s) 377, 506, 520, 624, 1062, 1391, 1778
MluNI TGGCCA 1 cut(s) 176
MlyI GAGTC 3 cut(s) 449, 1085, 1347
MmeI TCCRAC 1 cut(s) 1224
Mox20I TGGCCA 1 cut(s) 176
MroXI GAANNNNTTC 1 cut(s) 898
MscI TGGCCA 1 cut(s) 176
MseI TTAA 1 cut(s) 1529
Msp20I TGGCCA 1 cut(s) 176
MspA1I CMGCKG 1 cut(s) 1521
MspI CCGG 2 cut(s) 191, 399
MspR9I CCNGG 4 cut(s) 284, 400, 1463, 1697
MunI CAATTG 1 cut(s) 1062
Mva1269I GAATGC 2 cut(s) 552, 1633
MvaI CCWGG 3 cut(s) 284, 1463, 1697
MvnI CGCG 8 cut(s) 60, 297, 495, 1081, 1293, 1336, 1454, 1521
NciI CCSGG 1 cut(s) 400
NcoI CCATGG 2 cut(s) 177, 1069
NlaIII CATG 4 cut(s) 181, 452, 746, 1073
NlaIV GGNNCC 7 cut(s) 78, 195, 601, 939, 1194, 1305, 1738
NmuCI GTSAC 1 cut(s) 860
NruI TCGCGA 3 cut(s) 60, 1081, 1293
PaeR7I CTCGAG 1 cut(s) 1476
PceI AGGCCT 1 cut(s) 847
PciSI GCTCTTC 1 cut(s) 612
PctI GAATGC 2 cut(s) 552, 1633
PdmI GAANNNNTTC 1 cut(s) 898
PfeI GAWTC 5 cut(s) 89, 899, 1052, 1097, 1221
PkrI GCNGC 8 cut(s) 778, 814, 1203, 1389, 1439, 1453, 1691, 1747
Ple19I CGATCG 1 cut(s) 499
PleI GAGTC 3 cut(s) 448, 1084, 1346
PmaCI CACGTG 1 cut(s) 1759
PmlI CACGTG 1 cut(s) 1759
PpsI GAGTC 3 cut(s) 448, 1084, 1346
Ppu21I YACGTR 2 cut(s) 868, 1759
PpuMI RGGWCCY 3 cut(s) 698, 938, 1304
PshAI GACNNNNGTC 1 cut(s) 1025
Psp124BI GAGCTC 2 cut(s) 351, 505
Psp5II RGGWCCY 3 cut(s) 698, 938, 1304
Psp6I CCWGG 3 cut(s) 282, 1461, 1695
PspCI CACGTG 1 cut(s) 1759
PspEI GGTNACC 1 cut(s) 860
PspGI CCWGG 3 cut(s) 282, 1461, 1695
PspN4I GGNNCC 7 cut(s) 78, 195, 601, 939, 1194, 1305, 1738
PspPPI RGGWCCY 3 cut(s) 698, 938, 1304
PstI CTGCAG 2 cut(s) 616, 1389
PstNI CAGNNNCTG 1 cut(s) 611
PsuI RGATCY 2 cut(s) 457, 1597
PvuI CGATCG 1 cut(s) 499
RruI TCGCGA 3 cut(s) 60, 1081, 1293
RsaI GTAC 3 cut(s) 167, 870, 910
RsaNI GTAC 3 cut(s) 166, 869, 909
SacI GAGCTC 2 cut(s) 351, 505
SacII CCGCGG 1 cut(s) 1522
SapI GCTCTTC 1 cut(s) 612
SaqAI TTAA 1 cut(s) 1529
SatI GCNGC 8 cut(s) 777, 813, 1202, 1388, 1438, 1452, 1690, 1746
SchI GAGTC 3 cut(s) 449, 1085, 1347
ScrFI CCNGG 4 cut(s) 284, 400, 1463, 1697
SduI GDGCHC 5 cut(s) 280, 351, 505, 1043, 1435
SfaNI GCATC 4 cut(s) 177, 653, 697, 982
SfcI CTRYAG 3 cut(s) 612, 681, 1385
SfiI GGCCNNNNNGGCC 2 cut(s) 395, 1724
Sfr274I CTCGAG 1 cut(s) 1476
Sfr303I CCGCGG 1 cut(s) 1522
SgrBI CCGCGG 1 cut(s) 1522
SinI GGWCC 8 cut(s) 193, 556, 567, 599, 698, 823, 938, 1304
SlaI CTCGAG 1 cut(s) 1476
SmlI CTYRAG 1 cut(s) 1476
SmoI CTYRAG 1 cut(s) 1476
Sse9I AATT 7 cut(s) 377, 506, 520, 624, 1062, 1391, 1778
SseBI AGGCCT 1 cut(s) 847
SspMI CTAG 5 cut(s) 213, 635, 809, 818, 1502
SstI GAGCTC 2 cut(s) 351, 505
StuI AGGCCT 1 cut(s) 847
StyD4I CCNGG 4 cut(s) 282, 398, 1461, 1695
StyI CCWWGG 4 cut(s) 18, 177, 912, 1069
TaaI ACNGT 3 cut(s) 955, 986, 1027
TaiI ACGT 2 cut(s) 870, 1761
TaqI TCGA 8 cut(s) 87, 499, 513, 892, 1029, 1477, 1593, 1656
TasI AATT 7 cut(s) 377, 506, 520, 624, 1062, 1391, 1778
TatI WGTACW 1 cut(s) 165
TauI GCSGC 6 cut(s) 779, 815, 1440, 1454, 1692, 1748
TfiI GAWTC 5 cut(s) 89, 899, 1052, 1097, 1221
Tru1I TTAA 1 cut(s) 1529
Tru9I TTAA 1 cut(s) 1529
TscAI CASTG 4 cut(s) 478, 577, 616, 937
TseFI GTSAC 1 cut(s) 860
TseI GCWGC 2 cut(s) 1201, 1387
Tsp45I GTSAC 1 cut(s) 860
TspDTI ATGAA 6 cut(s) 468, 549, 759, 1152, 1434, 1674
TspGWI ACGGA 2 cut(s) 44, 548
TspRI CASTG 4 cut(s) 478, 577, 616, 937
VpaK11BI GGWCC 8 cut(s) 193, 556, 567, 599, 698, 823, 938, 1304
XagI CCTNNNNNAGG 1 cut(s) 590
XapI RAATTY 1 cut(s) 520
XcmI CCANNNNNNNNNTGG 1 cut(s) 307
XhoI CTCGAG 1 cut(s) 1476
XmnI GAANNNNTTC 1 cut(s) 898
XspI CTAG 5 cut(s) 213, 635, 809, 818, 1502
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.