Rmu_sc0003207.1_g000020

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003207.1
OG0000214
Physical Location & Seq
Reverse (-)
76973 .. 80361
3389 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003207.1_g000020.1.cds

Sequence Viewer

Length: 2760 bp
atggcatccaagaaaccattcgttatcgatcaggcaaatgaaatcactgagaaagcagcgttcacctggcggactgacattggtgttcgatgcagaagtcagaccagagaggagagaagtcgactgatgggctttggtggaggtgatagtcaagcgagtctaggtcccacacctcgcgaccgtttgccagatgatgctatggcctattataggcttcccatccgccgtcccatagcggctcttcggcaggtgcccggtgattttagcagttggggaccaaggaggaaagtgggcttctggcctaccatcgctcccgaggaaaatgtttgccctgcaccgctagccgtcgctctttgcttctggaacacctccagcaatacattcgatttccggtttaggcagatgagcataactctgctggatgttcttaccatcacggggttgcccattgactttgacccctatgtgcatggtcaatttgatggcattcaattttctttgagaatggatatggctggtcgggggcatcacagtagatcttacccattctggcgcgagtattactacacccagcgtgaccatacaggaggtatcgcattcctggaattctggctttgcaaatttatcttttgcacttcttccaacacacctactgggccctggaattctctggccactgctctctacaatggtatttgcgttggccttgggcaacctgtattgggtgcattatatcgctccctttatagagccgtaatgcgccccttcgatactgacattagtggccctttcttgatccttgccttttggctgcagatttatttccctcgcttccgtcgcggtgatattccaaaggaacctccagtcgattcccttttggggaactggctttgctgcaacgtaaggtatcgagctcctccctactccaagtgttttatttacttgtacttgctgggagagatgccggacccaaaaatagtcctttctaggcgattccctcctccccttgatgatggctttctgcccagtggacgggatcatagcgaaagatccttcctggcctttcgtcgcgccatctcctgcttggatattcgtcttgccaccgaccgccggagattagccccgcttgggtctgccccctttcagaatcagtttactttgatagtgatgcccccttgggtcaaagcgctgtacccccttagtgatgtcgacgatgattatgctgattggtggaaagaagtgtccgtgaactgttgggacctaccacatgacgaactcttcatcctgatcttttgtggcatgagtagtcctggtctggaggatcgcgagatttttgagcgcttctccaaccctgcagcacgatccccgcgacctattctaccttcctgctcatcgcgtccagggatacaaatccacgagcctaggccaacacaaactacccggagtaggacagcctcagttcaggccgggaaactaaaggtaatagcagaggagactcctgagggagagtcttctcatgatgaagatcccgttgaggccactgctgtcttcgcttgcaaaagcgatcgagctcaattcgtcgaagagagttttgaaggtgacgaacctctgggaatgcgatcggtctgtcagaggaccactgatccctctcgcctgagcgaggctggatcctcagccactgcagaagagccaattctctcgctaattcaagcatcaactaaccccgtggcacctcttccatctcccacatctacagagcatctgcaaggtcctaccattctaataacgatctctgatgacgaatcctcggagcatgaaagcgtggaaagccactctgaggcttctgacgcttatgaggaactgatgacgacagagattctcgcggcactagaggtccaagaggtgaatgaggcgaggcttcttcctgttggtgaccacgtaccagatattgacccgacagctggagaggattctgtttgtaccgaggaggtggctgcaaacgctgagggtcctatcggcgggacagtcgccccagagatggaaaatgatactaacggtggtggtgccccccaagtctcgcgaacaaatgagacaaccatcgaagttgaggtctctgtacttgaatctgctctgcttgcccatgatgaagaaactgaggaagctgtccacccttttgcattggtggttcgtgatcttgtggcgcctccgccacctcctcctcctcccaccagattcgagagattgatgagggtgttggaggtaactcctccttctgctgtggatgaggctaagatggtgcttcacgaacatctgggtcctcgggagaaggcattgaccctggagcaatttagtgccattgacgttctgctgaatgaacttggtgaggcccgccgacgtcaatcggctgtgaacgcccaggctcacgacgctcgagaggctttgaatagcctctctcgagaaatggacatctcacgcggtattttaaatgagcgagccatccgcctgcgggaactacaaatccaaaggtccgacttcaaacttcggatcgaggacctccaagctcgtttagcctttgttgagaatgcgattgttgcagaagaagctcaactcgatgaacctttggctgcttctgaagaaatgggcctcaacctggcccatattagagaacgggccactcaggccgaagctggtgccattgcggcgaaactcctcgtggaggaactttgcttgaaattgagctttgcgggccaatctctgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

919

Amino Acids

102.32

Weight (kDa)

4.92

Isoelectric Point (pI)

54.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000214)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0079611
rosa_multiflora Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha Rh3DG208400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 238
AatII GACGTC 1 cut(s) 2398
Acc36I ACCTGC 1 cut(s) 238
AccB1I GGYRCC 5 cut(s) 250, 1729, 2063, 2200, 2690
AccI GTMKAC 2 cut(s) 121, 1209
AcoI YGGCCR 1 cut(s) 672
AcsI RAATTY 3 cut(s) 605, 620, 664
AcuI CTGAAG 1 cut(s) 2652
AcyI GRCGYC 2 cut(s) 2201, 2395
AfaI GTAC 5 cut(s) 947, 1193, 1941, 1981, 2118
AfeI AGCGCT 2 cut(s) 1188, 1340
AgsI TTSAA 7 cut(s) 491, 1595, 1709, 2123, 2443, 2536, 2731
AjnI CCWGG 9 cut(s) 65, 600, 659, 1056, 1309, 1399, 2337, 2415, 2649
AjuI GAANNNNNNNTTGG 1 cut(s) 34
AloI GAACNNNNNNTCC 4 cut(s) 1266, 1298, 2502, 2534
AluBI AGCT 8 cut(s) 914, 1571, 1961, 2162, 2561, 2603, 2687, 2739
AluI AGCT 8 cut(s) 914, 1571, 1961, 2162, 2561, 2603, 2687, 2739
Alw21I GWGCWC 2 cut(s) 916, 1573
Alw26I GTCTC 4 cut(s) 1487, 2080, 2084, 2116
AlwNI CAGNNNCTG 1 cut(s) 1679
Ama87I CYCGRG 4 cut(s) 314, 2319, 2430, 2454
Aor51HI AGCGCT 2 cut(s) 1188, 1340
ApaI GGGCCC 1 cut(s) 660
ApeKI GCWGC 6 cut(s) 56, 811, 894, 1355, 1994, 2624
ApoI RAATTY 3 cut(s) 605, 620, 664
ArsI GACNNNNNNTTYG 2 cut(s) 2094, 2126
Asp700I GAANNNNTTC 1 cut(s) 17
AspA2I CCTAGG 1 cut(s) 1421
AspLEI GCGC 6 cut(s) 555, 762, 1073, 1189, 1341, 2203
AsuC2I CCSGG 3 cut(s) 255, 1441, 1468
AsuHPI GGTGA 8 cut(s) 55, 155, 269, 854, 1610, 1915, 1943, 2393
AsuNHI GCTAGC 1 cut(s) 340
AvaI CYCGRG 4 cut(s) 314, 2319, 2430, 2454
AvrII CCTAGG 1 cut(s) 1421
AxyI CCTNAGG 1 cut(s) 1500
BaeGI GKGCMC 3 cut(s) 255, 660, 2068
BalI TGGCCA 1 cut(s) 674
BamHI GGATCC 1 cut(s) 1667
BanI GGYRCC 5 cut(s) 250, 1729, 2063, 2200, 2690
BanII GRGCYC 3 cut(s) 660, 916, 1573
BauI CACGAG 2 cut(s) 1415, 2711
BbsI GAAGAC 2 cut(s) 1503, 1540
Bbv12I GWGCWC 2 cut(s) 916, 1573
BbvCI CCTCAGC 2 cut(s) 1672, 2004
BbvI GCAGC 6 cut(s) 68, 798, 881, 1367, 1981, 2611
BceAI ACGGC 3 cut(s) 210, 329, 737
BcgI CGANNNNNNTGC 6 cut(s) 364, 398, 1202, 1236, 2672, 2706
BciT130I CCWGG 9 cut(s) 67, 602, 661, 1058, 1311, 1401, 2339, 2417, 2651
BciVI GTATCC 1 cut(s) 1398
BcnI CCSGG 3 cut(s) 255, 1441, 1468
BcoDI GTCTC 4 cut(s) 1487, 2080, 2084, 2116
BfaI CTAG 5 cut(s) 161, 341, 987, 1422, 1889
BfmI CTRYAG 5 cut(s) 812, 1353, 1680, 1752, 2756
BfoI RGCGCY 3 cut(s) 1190, 1342, 2204
BfuAI ACCTGC 1 cut(s) 238
BfuI GTATCC 1 cut(s) 1398
BglI GCCNNNNNGGC 2 cut(s) 2678, 2699
BglII AGATCT 1 cut(s) 536
BisI GCNGC 9 cut(s) 57, 237, 812, 895, 1356, 1884, 1995, 2625, 2700
BlnI CCTAGG 1 cut(s) 1421
BlsI GCNGC 9 cut(s) 58, 238, 813, 896, 1357, 1885, 1996, 2626, 2701
BmeT110I CYCGRG 4 cut(s) 314, 2319, 2430, 2454
BmrI ACTGGG 2 cut(s) 663, 1020
BmsI GCATC 8 cut(s) 14, 80, 184, 535, 951, 1158, 1721, 1768
BmtI GCTAGC 1 cut(s) 344
BmuI ACTGGG 2 cut(s) 663, 1020
BpiI GAAGAC 2 cut(s) 1503, 1540
BplI GAGNNNNNCTC 4 cut(s) 397, 429, 1328, 1360
BpmI CTGGAG 5 cut(s) 355, 846, 1337, 1983, 2360
Bpu10I CCTNAGC 3 cut(s) 1655, 1672, 2004
BpuMI CCSGG 3 cut(s) 255, 1441, 1468
Bsa29I ATCGAT 1 cut(s) 27
BsaAI YACGTR 1 cut(s) 1939
BsaBI GATNNNNATC 2 cut(s) 1409, 1524
BsaHI GRCGYC 2 cut(s) 2201, 2395
BsaI GGTCTC 1 cut(s) 2116
BsaWI WCCGGW 1 cut(s) 390
BsaXI ACNNNNNCTCC 2 cut(s) 295, 325
Bse1I ACTGG 4 cut(s) 658, 863, 890, 1026
Bse21I CCTNAGG 1 cut(s) 1500
Bse3DI GCAATG 1 cut(s) 2694
Bse8I GATNNNNATC 2 cut(s) 1409, 1524
BseBI CCWGG 9 cut(s) 67, 602, 661, 1058, 1311, 1401, 2339, 2417, 2651
BseCI ATCGAT 1 cut(s) 27
BseGI GGATG 6 cut(s) 5, 219, 427, 1281, 2287, 2496
BseJI GATNNNNATC 2 cut(s) 1409, 1524
BseMI GCAATG 1 cut(s) 2694
BseMII CTCAG 9 cut(s) 39, 1470, 1491, 1646, 1686, 1827, 1995, 2145, 2690
BseNI ACTGG 4 cut(s) 658, 863, 890, 1026
BseSI GKGCMC 3 cut(s) 255, 660, 2068
BseXI GCAGC 6 cut(s) 68, 798, 881, 1367, 1981, 2611
BseYI CCCAGC 2 cut(s) 570, 952
BsgI GTGCAG 1 cut(s) 318
Bsh1285I CGRYCG 4 cut(s) 181, 1108, 1567, 1622
BshNI GGYRCC 5 cut(s) 250, 1729, 2063, 2200, 2690
BshVI ATCGAT 1 cut(s) 27
BsiEI CGRYCG 4 cut(s) 181, 1108, 1567, 1622
BsiHKAI GWGCWC 2 cut(s) 916, 1573
BsiHKCI CYCGRG 4 cut(s) 314, 2319, 2430, 2454
BsiSI CCGG 6 cut(s) 255, 391, 965, 1111, 1441, 1467
BslFI GGGAC 5 cut(s) 150, 213, 288, 1271, 2035
BsmAI GTCTC 4 cut(s) 1487, 2080, 2084, 2116
BsmFI GGGAC 5 cut(s) 150, 213, 288, 1271, 2035
BsmI GAATGC 4 cut(s) 486, 596, 1620, 2587
Bso31I GGTCTC 1 cut(s) 2116
BsoBI CYCGRG 4 cut(s) 314, 2319, 2430, 2454
Bsp120I GGGCCC 1 cut(s) 656
Bsp1286I GDGCHC 5 cut(s) 255, 660, 916, 1573, 2068
Bsp68I TCGCGA 3 cut(s) 177, 1326, 2080
BspCNI CTCAG 9 cut(s) 40, 1469, 1492, 1647, 1685, 1828, 1996, 2146, 2689
BspDI ATCGAT 1 cut(s) 27
BspHI TCATGA 1 cut(s) 1516
BspMAI CTGCAG 3 cut(s) 816, 1357, 1684
BspMI ACCTGC 1 cut(s) 238
BspOI GCTAGC 1 cut(s) 344
BspQI GCTCTTC 2 cut(s) 246, 1680
BspT107I GGYRCC 5 cut(s) 250, 1729, 2063, 2200, 2690
BspTNI GGTCTC 1 cut(s) 2116
BsrDI GCAATG 1 cut(s) 2694
BsrI ACTGG 4 cut(s) 658, 863, 890, 1026
BssNI GRCGYC 2 cut(s) 2201, 2395
BssSI CACGAG 2 cut(s) 1415, 2711
BssT1I CCWWGG 4 cut(s) 278, 706, 1175, 1421
Bst2BI CACGAG 2 cut(s) 1415, 2711
Bst2UI CCWGG 9 cut(s) 67, 602, 661, 1058, 1311, 1401, 2339, 2417, 2651
Bst4CI ACNGT 5 cut(s) 182, 533, 1253, 2026, 2057
Bst6I CTCTTC 5 cut(s) 246, 1283, 1578, 1680, 1740
BstACI GRCGYC 2 cut(s) 2201, 2395
BstBAI YACGTR 1 cut(s) 1939
BstC8I GCNNGC 7 cut(s) 342, 1555, 2136, 2389, 2493, 2504, 2746
BstDSI CCRYGG 1 cut(s) 1725
BstEII GGTNACC 1 cut(s) 1931
BstENI CCTNNNNNAGG 3 cut(s) 208, 1658, 2714
BstF5I GGATG 6 cut(s) 5, 219, 427, 1281, 2287, 2496
BstH2I RGCGCY 3 cut(s) 1190, 1342, 2204
BstHHI GCGC 6 cut(s) 555, 762, 1073, 1189, 1341, 2203
BstMAI GTCTC 4 cut(s) 1487, 2080, 2084, 2116
BstMCI CGRYCG 4 cut(s) 181, 1108, 1567, 1622
BstNI CCWGG 9 cut(s) 67, 602, 661, 1058, 1311, 1401, 2339, 2417, 2651
BstPI GGTNACC 1 cut(s) 1931
BstSFI CTRYAG 5 cut(s) 812, 1353, 1680, 1752, 2756
BstSLI GKGCMC 3 cut(s) 255, 660, 2068
BstV1I GCAGC 6 cut(s) 68, 798, 881, 1367, 1981, 2611
BstV2I GAAGAC 2 cut(s) 1503, 1540
BstX2I RGATCY 4 cut(s) 536, 1049, 1525, 1667
BstYI RGATCY 4 cut(s) 536, 1049, 1525, 1667
Bsu15I ATCGAT 1 cut(s) 27
Bsu36I CCTNAGG 1 cut(s) 1500
BsuI GTATCC 1 cut(s) 1398
BsuTUI ATCGAT 1 cut(s) 27
BtgI CCRYGG 1 cut(s) 1725
BtgZI GCGATG 2 cut(s) 292, 1377
BtsCI GGATG 6 cut(s) 5, 219, 427, 1281, 2287, 2496
BtsI GCAGTG 3 cut(s) 675, 1539, 1677
BtsIMutI CAGTG 6 cut(s) 45, 675, 1033, 1539, 1638, 1677
BtuMI TCGCGA 3 cut(s) 177, 1326, 2080
BveI ACCTGC 1 cut(s) 238
Cac8I GCNNGC 7 cut(s) 342, 1555, 2136, 2389, 2493, 2504, 2746
CaiI CAGNNNCTG 1 cut(s) 1679
CciI TCATGA 1 cut(s) 1516
CfoI GCGC 6 cut(s) 555, 762, 1073, 1189, 1341, 2203
ClaI ATCGAT 1 cut(s) 27
CseI GACGC 3 cut(s) 1385, 1856, 2435
Csp6I GTAC 5 cut(s) 946, 1192, 1940, 1980, 2117
CviAII CATG 6 cut(s) 470, 1268, 1300, 1517, 1814, 2141
CviQI GTAC 5 cut(s) 946, 1192, 1940, 1980, 2117
DinI GGCGCC 1 cut(s) 2202
DraI TTTAAA 1 cut(s) 2484
EaeI YGGCCR 1 cut(s) 672
Eam1104I CTCTTC 5 cut(s) 246, 1283, 1578, 1680, 1740
EarI CTCTTC 5 cut(s) 246, 1283, 1578, 1680, 1740
EciI GGCGGA 4 cut(s) 85, 212, 2196, 2489
Ecl136II GAGCTC 2 cut(s) 914, 1571
Eco130I CCWWGG 4 cut(s) 278, 706, 1175, 1421
Eco24I GRGCYC 3 cut(s) 660, 916, 1573
Eco31I GGTCTC 1 cut(s) 2116
Eco47III AGCGCT 2 cut(s) 1188, 1340
Eco53kI GAGCTC 2 cut(s) 914, 1571
Eco57I CTGAAG 1 cut(s) 2652
Eco81I CCTNAGG 1 cut(s) 1500
Eco88I CYCGRG 4 cut(s) 314, 2319, 2430, 2454
Eco91I GGTNACC 1 cut(s) 1931
EcoICRI GAGCTC 2 cut(s) 914, 1571
EcoNI CCTNNNNNAGG 3 cut(s) 208, 1658, 2714
EcoO109I RGGNCCY 7 cut(s) 164, 657, 1258, 1769, 2009, 2315, 2551
EcoO65I GGTNACC 1 cut(s) 1931
EcoRI GAATTC 2 cut(s) 605, 664
EcoRII CCWGG 9 cut(s) 65, 600, 659, 1056, 1309, 1399, 2337, 2415, 2649
EcoT14I CCWWGG 4 cut(s) 278, 706, 1175, 1421
EcoT38I GRGCYC 3 cut(s) 660, 916, 1573
EgeI GGCGCC 1 cut(s) 2202
EheI GGCGCC 1 cut(s) 2202
ErhI CCWWGG 4 cut(s) 278, 706, 1175, 1421
FaeI CATG 6 cut(s) 473, 1271, 1303, 1520, 1817, 2144
FaqI GGGAC 5 cut(s) 150, 213, 288, 1271, 2035
FatI CATG 6 cut(s) 469, 1267, 1299, 1516, 1813, 2140
FauI CCCGC 6 cut(s) 1131, 1374, 2012, 2396, 2499, 2737
FblI GTMKAC 2 cut(s) 121, 1209
Fnu4HI GCNGC 9 cut(s) 57, 237, 812, 895, 1356, 1884, 1995, 2625, 2700
FokI GGATG 5 cut(s) 206, 434, 1268, 2294, 2483
FriOI GRGCYC 3 cut(s) 660, 916, 1573
Fsp4HI GCNGC 9 cut(s) 57, 237, 812, 895, 1356, 1884, 1995, 2625, 2700
FspBI CTAG 5 cut(s) 161, 341, 987, 1422, 1889
GlaI GCGC 6 cut(s) 554, 761, 1072, 1188, 1340, 2202
GluI GCNGC 9 cut(s) 57, 237, 812, 895, 1356, 1884, 1995, 2625, 2700
GsaI CCCAGC 2 cut(s) 574, 956
GsuI CTGGAG 5 cut(s) 355, 846, 1337, 1983, 2360
HaeII RGCGCY 3 cut(s) 1190, 1342, 2204
HapII CCGG 6 cut(s) 255, 391, 965, 1111, 1441, 1467
HgaI GACGC 3 cut(s) 1385, 1856, 2435
HhaI GCGC 6 cut(s) 555, 762, 1073, 1189, 1341, 2203
Hin1I GRCGYC 2 cut(s) 2201, 2395
Hin1II CATG 6 cut(s) 473, 1271, 1303, 1520, 1817, 2144
Hin6I GCGC 6 cut(s) 553, 760, 1071, 1187, 1339, 2201
HinP1I GCGC 6 cut(s) 553, 760, 1071, 1187, 1339, 2201
HincII GTYRAC 2 cut(s) 122, 1210
HindII GTYRAC 2 cut(s) 122, 1210
HpaII CCGG 6 cut(s) 255, 391, 965, 1111, 1441, 1467
HphI GGTGA 8 cut(s) 55, 155, 269, 854, 1610, 1915, 1943, 2393
Hpy166II GTNNAC 8 cut(s) 63, 122, 1031, 1155, 1210, 1249, 2167, 2410
Hpy8I GTNNAC 8 cut(s) 63, 122, 1031, 1155, 1210, 1249, 2167, 2410
Hpy99I CGWCG 7 cut(s) 350, 840, 1071, 1214, 1583, 2397, 2429
HpyAV CCTTC 6 cut(s) 775, 1063, 1392, 1589, 2280, 2320
HpyCH4III ACNGT 5 cut(s) 182, 533, 1253, 2026, 2057
HpyCH4IV ACGT 4 cut(s) 900, 1938, 2361, 2395
HpySE526I ACGT 4 cut(s) 900, 1938, 2361, 2395
Hsp92I GRCGYC 2 cut(s) 2201, 2395
Hsp92II CATG 6 cut(s) 473, 1271, 1303, 1520, 1817, 2144
HspAI GCGC 6 cut(s) 553, 760, 1071, 1187, 1339, 2201
KasI GGCGCC 1 cut(s) 2200
LguI GCTCTTC 2 cut(s) 246, 1680
LmnI GCTCC 5 cut(s) 316, 743, 919, 1810, 2341
Lsp1109I GCAGC 6 cut(s) 68, 798, 881, 1367, 1981, 2611
LweI GCATC 8 cut(s) 14, 80, 184, 535, 951, 1158, 1721, 1768
MaeI CTAG 5 cut(s) 161, 341, 987, 1422, 1889
MaeII ACGT 4 cut(s) 900, 1938, 2361, 2395
MaeIII GTNAC 4 cut(s) 575, 1598, 1931, 2260
MflI RGATCY 4 cut(s) 536, 1049, 1525, 1667
MhlI GDGCHC 5 cut(s) 255, 660, 916, 1573, 2068
MlsI TGGCCA 1 cut(s) 674
MluNI TGGCCA 1 cut(s) 674
Mly113I GGCGCC 1 cut(s) 2201
MlyI GAGTC 3 cut(s) 166, 1489, 1517
MmeI TCCRAC 4 cut(s) 666, 1371, 2235, 2553
Mox20I TGGCCA 1 cut(s) 674
MroXI GAANNNNTTC 1 cut(s) 17
MscI TGGCCA 1 cut(s) 674
MseI TTAA 1 cut(s) 2483
Msp20I TGGCCA 1 cut(s) 674
MspA1I CMGCKG 1 cut(s) 1961
MspI CCGG 6 cut(s) 255, 391, 965, 1111, 1441, 1467
Mva1269I GAATGC 4 cut(s) 486, 596, 1620, 2587
MvaI CCWGG 9 cut(s) 67, 602, 661, 1058, 1311, 1401, 2339, 2417, 2651
NarI GGCGCC 1 cut(s) 2201
NciI CCSGG 3 cut(s) 255, 1441, 1468
NheI GCTAGC 1 cut(s) 340
NlaIII CATG 6 cut(s) 473, 1271, 1303, 1520, 1817, 2144
NmuCI GTSAC 3 cut(s) 575, 1598, 1931
NruI TCGCGA 3 cut(s) 177, 1326, 2080
PaeR7I CTCGAG 2 cut(s) 2430, 2454
PagI TCATGA 1 cut(s) 1516
PaqCI CACCTGC 1 cut(s) 238
PciSI GCTCTTC 2 cut(s) 246, 1680
PcsI WCGNNNNNNNCGW 1 cut(s) 1366
PctI GAATGC 4 cut(s) 486, 596, 1620, 2587
PdmI GAANNNNTTC 1 cut(s) 17
PfeI GAWTC 8 cut(s) 869, 993, 1147, 1802, 1876, 1970, 2123, 2232
PfoI TCCNGGA 1 cut(s) 600
PkrI GCNGC 9 cut(s) 58, 238, 813, 896, 1357, 1885, 1996, 2626, 2701
Ple19I CGATCG 2 cut(s) 1567, 1622
PleI GAGTC 3 cut(s) 165, 1489, 1516
PluTI GGCGCC 1 cut(s) 2204
PpsI GAGTC 3 cut(s) 165, 1489, 1516
Ppu21I YACGTR 1 cut(s) 1939
PpuMI RGGWCCY 6 cut(s) 164, 1258, 1769, 2009, 2315, 2551
Psp124BI GAGCTC 2 cut(s) 916, 1573
Psp5II RGGWCCY 6 cut(s) 164, 1258, 1769, 2009, 2315, 2551
Psp6I CCWGG 9 cut(s) 65, 600, 659, 1056, 1309, 1399, 2337, 2415, 2649
PspEI GGTNACC 1 cut(s) 1931
PspFI CCCAGC 2 cut(s) 570, 952
PspGI CCWGG 9 cut(s) 65, 600, 659, 1056, 1309, 1399, 2337, 2415, 2649
PspOMI GGGCCC 1 cut(s) 656
PspPPI RGGWCCY 6 cut(s) 164, 1258, 1769, 2009, 2315, 2551
PstI CTGCAG 3 cut(s) 816, 1357, 1684
PstNI CAGNNNCTG 1 cut(s) 1679
PsuI RGATCY 4 cut(s) 536, 1049, 1525, 1667
PvuI CGATCG 2 cut(s) 1567, 1622
PvuII CAGCTG 1 cut(s) 1961
RruI TCGCGA 3 cut(s) 177, 1326, 2080
RsaI GTAC 5 cut(s) 947, 1193, 1941, 1981, 2118
RsaNI GTAC 5 cut(s) 946, 1192, 1940, 1980, 2117
SacI GAGCTC 2 cut(s) 916, 1573
SalI GTCGAC 2 cut(s) 120, 1208
SapI GCTCTTC 2 cut(s) 246, 1680
SaqAI TTAA 1 cut(s) 2483
SatI GCNGC 9 cut(s) 57, 237, 812, 895, 1356, 1884, 1995, 2625, 2700
SchI GAGTC 3 cut(s) 166, 1489, 1517
SduI GDGCHC 5 cut(s) 255, 660, 916, 1573, 2068
SfaNI GCATC 8 cut(s) 14, 80, 184, 535, 951, 1158, 1721, 1768
SfcI CTRYAG 5 cut(s) 812, 1353, 1680, 1752, 2756
SfiI GGCCNNNNNGGCC 1 cut(s) 2678
SfoI GGCGCC 1 cut(s) 2202
Sfr274I CTCGAG 2 cut(s) 2430, 2454
SlaI CTCGAG 2 cut(s) 2430, 2454
SmlI CTYRAG 2 cut(s) 2430, 2454
SmoI CTYRAG 2 cut(s) 2430, 2454
SspDI GGCGCC 1 cut(s) 2200
SspMI CTAG 5 cut(s) 161, 341, 987, 1422, 1889
SstI GAGCTC 2 cut(s) 916, 1573
StyI CCWWGG 4 cut(s) 278, 706, 1175, 1421
TaaI ACNGT 5 cut(s) 182, 533, 1253, 2026, 2057
TaiI ACGT 4 cut(s) 903, 1941, 2364, 2398
TaqII GACCGA 1 cut(s) 1612
TatI WGTACW 2 cut(s) 945, 2116
TauI GCSGC 3 cut(s) 239, 1886, 2702
TfiI GAWTC 8 cut(s) 869, 993, 1147, 1802, 1876, 1970, 2123, 2232
Tru1I TTAA 1 cut(s) 2483
Tru9I TTAA 1 cut(s) 2483
TscAI CASTG 6 cut(s) 52, 682, 1033, 1546, 1645, 1684
TseFI GTSAC 3 cut(s) 575, 1598, 1931
TseI GCWGC 6 cut(s) 56, 811, 894, 1355, 1994, 2624
Tsp45I GTSAC 3 cut(s) 575, 1598, 1931
TspDTI ATGAA 7 cut(s) 54, 1270, 1536, 1830, 2160, 2388, 2628
TspGWI ACGGA 2 cut(s) 824, 1234
TspRI CASTG 6 cut(s) 52, 682, 1033, 1546, 1645, 1684
XagI CCTNNNNNAGG 3 cut(s) 208, 1658, 2714
XapI RAATTY 3 cut(s) 605, 620, 664
XcmI CCANNNNNNNNNTGG 1 cut(s) 1081
XhoI CTCGAG 2 cut(s) 2430, 2454
XmaJI CCTAGG 1 cut(s) 1421
XmiI GTMKAC 2 cut(s) 121, 1209
XmnI GAANNNNTTC 1 cut(s) 17
XspI CTAG 5 cut(s) 161, 341, 987, 1422, 1889
ZraI GACGTC 1 cut(s) 2396
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.