Rmu_sc0004525.1_g000006

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004525.1
OG0000214
Physical Location & Seq
Forward (+)
28919 .. 30136
1218 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004525.1_g000006.1.cds

Sequence Viewer

Length: 1119 bp
atggcatccaagaaaccattcgttatcgatcaggcatatgaaatcactgagaaggccgtattcacctggcgaactaacatgggtgttcgatgtagaagtcagaccggtgaggagagaagtcgactgataggctttggtggagttgatagtcaagcgagtctgggtcccacacctcgagatcgtttgccggatgatgctatggcctattatgggcttcccatccgccgtcccatagctgctcttcagcaagtgcccggcgattttagtagttggggaccaagaaggaaagtgggcttctggcctaccatcactcccgaggaaaatatttggtatcaggaggtccgaactagagatttggccagatgggatgcggtgggtatcaaccaaaccatcgatctatgcttctgtcttccccataatactagccctacaccgctagccgccgctctttgcttctggaacacctccagcagtacattcgatttccggtttgggcagatgagcataattttgctagatgttcttaccatcacggggttgcccattgattttgacccctatgtgcatggtcagtttgatggcattcaatttcctttgagaatggatatggctagttggggacatcacagcaaatcctactcattttggcgcaactgttactggacccagcatgaccatacaggaggtatcgcattcctagaattctggctttgcaaatttatcttttgcacttcttccaacaaacctactgggccctggaattctctggccactgctctctataatggtatttgcattggccttgggcaacctatttatttccctcgctttcgtcgcggtgatattccaaatgaacctccagtcgattcccttttagggaactggctttgccgcaacgtaaggtatcgagctccaccctactccgagtgttttatttacttgtacttgctgaaagagatgtcggacccaaaaatagtcctttctaggcgattccatccttcccttgatgatggctttctgcccaatggacgggatcatagcgaaagagctctcatggcatttcgtcgcgccatctccagcttggatattcatcttgccaccgaccacataagttactag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

372

Amino Acids

42.6

Weight (kDa)

8.02

Isoelectric Point (pI)

45.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000214)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0079611
rosa_multiflora Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha Rh3DG208400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 446
AccI GTMKAC 1 cut(s) 121
AccII CGCG 2 cut(s) 837, 1068
AciI CCGC 7 cut(s) 223, 371, 434, 441, 444, 837, 892
AclWI GGATC 1 cut(s) 1041
AcoI YGGCCR 2 cut(s) 357, 768
AcsI RAATTY 3 cut(s) 701, 716, 760
AcuI CTGAAG 1 cut(s) 227
AfaI GTAC 2 cut(s) 475, 944
AfiI CCNNNNNNNGG 4 cut(s) 210, 534, 876, 1029
AgeI ACCGGT 1 cut(s) 104
AgsI TTSAA 1 cut(s) 587
AjnI CCWGG 2 cut(s) 65, 755
AjuI GAANNNNNNNTTGG 1 cut(s) 34
AluBI AGCT 4 cut(s) 236, 911, 1049, 1080
AluI AGCT 4 cut(s) 236, 911, 1049, 1080
Alw21I GWGCWC 2 cut(s) 913, 1051
AlwI GGATC 1 cut(s) 1041
Ama87I CYCGRG 2 cut(s) 174, 314
AoxI GGCC 7 cut(s) 54, 201, 299, 357, 752, 768, 799
ApaI GGGCCC 1 cut(s) 756
ApeKI GCWGC 1 cut(s) 236
ApoI RAATTY 3 cut(s) 701, 716, 760
AsiGI ACCGGT 1 cut(s) 104
Asp700I GAANNNNTTC 1 cut(s) 17
AspLEI GCGC 2 cut(s) 651, 1070
AspS9I GGNCC 7 cut(s) 164, 275, 340, 663, 752, 753, 964
AsuC2I CCSGG 1 cut(s) 255
AsuHPI GGTGA 3 cut(s) 55, 119, 851
AsuNHI GCTAGC 1 cut(s) 436
AvaI CYCGRG 2 cut(s) 174, 314
AvaII GGWCC 5 cut(s) 164, 275, 340, 663, 964
BaeGI GKGCMC 2 cut(s) 255, 756
BalI TGGCCA 2 cut(s) 359, 770
BanII GRGCYC 3 cut(s) 756, 913, 1051
BbsI GAAGAC 1 cut(s) 401
Bbv12I GWGCWC 2 cut(s) 913, 1051
BbvI GCAGC 1 cut(s) 223
BccI CCATC 9 cut(s) 227, 314, 357, 398, 536, 572, 1002, 1004, 1079
BceAI ACGGC 2 cut(s) 41, 210
BcgI CGANNNNNNTGC 2 cut(s) 460, 494
BciT130I CCWGG 2 cut(s) 67, 757
BcnI CCSGG 1 cut(s) 255
BfaI CTAG 8 cut(s) 348, 423, 437, 515, 612, 698, 984, 1117
BisI GCNGC 4 cut(s) 237, 441, 444, 892
BlsI GCNGC 4 cut(s) 238, 442, 445, 893
Bme1390I CCNGG 3 cut(s) 67, 255, 757
Bme18I GGWCC 5 cut(s) 164, 275, 340, 663, 964
BmeT110I CYCGRG 2 cut(s) 174, 314
BmgT120I GGNCC 7 cut(s) 164, 275, 340, 663, 752, 753, 964
BmiI GGNNCC 6 cut(s) 165, 166, 276, 665, 754, 966
BmrFI CCNGG 3 cut(s) 67, 255, 757
BmrI ACTGGG 1 cut(s) 759
BmsI GCATC 3 cut(s) 14, 184, 358
BmtI GCTAGC 1 cut(s) 440
BmuI ACTGGG 1 cut(s) 759
BpiI GAAGAC 1 cut(s) 401
BpmI CTGGAG 3 cut(s) 451, 843, 1060
BpuMI CCSGG 1 cut(s) 255
Bsa29I ATCGAT 2 cut(s) 27, 393
BsaBI GATNNNNATC 1 cut(s) 1089
BsaJI CCNNGG 3 cut(s) 315, 755, 802
BsaWI WCCGGW 2 cut(s) 104, 486
BsaXI ACNNNNNCTCC 2 cut(s) 295, 325
Bsc4I CCNNNNNNNGG 4 cut(s) 210, 534, 876, 1029
Bse118I RCCGGY 1 cut(s) 104
Bse1I ACTGG 4 cut(s) 665, 754, 860, 887
Bse8I GATNNNNATC 1 cut(s) 1089
BseBI CCWGG 2 cut(s) 67, 757
BseCI ATCGAT 2 cut(s) 27, 393
BseDI CCNNGG 3 cut(s) 315, 755, 802
BseGI GGATG 5 cut(s) 5, 196, 219, 373, 994
BseJI GATNNNNATC 1 cut(s) 1089
BseLI CCNNNNNNNGG 4 cut(s) 210, 534, 876, 1029
BseMII CTCAG 1 cut(s) 39
BseNI ACTGG 4 cut(s) 665, 754, 860, 887
BseRI GAGGAG 1 cut(s) 125
BseSI GKGCMC 2 cut(s) 255, 756
BseXI GCAGC 1 cut(s) 223
BseYI CCCAGC 1 cut(s) 666
Bsh1236I CGCG 2 cut(s) 837, 1068
BshFI GGCC 7 cut(s) 56, 203, 301, 359, 754, 770, 801
BshTI ACCGGT 1 cut(s) 104
BshVI ATCGAT 2 cut(s) 27, 393
BsiHKAI GWGCWC 2 cut(s) 913, 1051
BsiHKCI CYCGRG 2 cut(s) 174, 314
BsiSI CCGG 4 cut(s) 105, 188, 255, 487
BslFI GGGAC 4 cut(s) 150, 213, 288, 633
BslI CCNNNNNNNGG 4 cut(s) 210, 534, 876, 1029
BsmFI GGGAC 4 cut(s) 150, 213, 288, 633
BsmI GAATGC 2 cut(s) 582, 692
BsnI GGCC 7 cut(s) 56, 203, 301, 359, 754, 770, 801
BsoBI CYCGRG 2 cut(s) 174, 314
Bsp120I GGGCCC 1 cut(s) 752
Bsp1286I GDGCHC 4 cut(s) 255, 756, 913, 1051
Bsp143I GATC 4 cut(s) 28, 178, 394, 1033
BspACI CCGC 7 cut(s) 223, 371, 434, 441, 444, 837, 892
BspANI GGCC 7 cut(s) 56, 203, 301, 359, 754, 770, 801
BspCNI CTCAG 1 cut(s) 40
BspDI ATCGAT 2 cut(s) 27, 393
BspFNI CGCG 2 cut(s) 837, 1068
BspLI GGNNCC 6 cut(s) 165, 166, 276, 665, 754, 966
BspOI GCTAGC 1 cut(s) 440
BspPI GGATC 1 cut(s) 1041
BspQI GCTCTTC 1 cut(s) 246
BsrBI CCGCTC 1 cut(s) 446
BsrFI RCCGGY 1 cut(s) 104
BsrI ACTGG 4 cut(s) 665, 754, 860, 887
BssAI RCCGGY 1 cut(s) 104
BssECI CCNNGG 3 cut(s) 315, 755, 802
BssMI GATC 4 cut(s) 28, 178, 394, 1033
BssT1I CCWWGG 1 cut(s) 802
Bst2UI CCWGG 2 cut(s) 67, 757
Bst4CI ACNGT 1 cut(s) 656
Bst6I CTCTTC 1 cut(s) 246
BstC8I GCNNGC 1 cut(s) 438
BstDEI CTNAG 1 cut(s) 48
BstF5I GGATG 5 cut(s) 5, 196, 219, 373, 994
BstFNI CGCG 2 cut(s) 837, 1068
BstHHI GCGC 2 cut(s) 651, 1070
BstKTI GATC 4 cut(s) 31, 181, 397, 1036
BstMBI GATC 4 cut(s) 28, 178, 394, 1033
BstMWI GCNNNNNNNGC 2 cut(s) 834, 1055
BstNI CCWGG 2 cut(s) 67, 757
BstSCI CCNGG 3 cut(s) 65, 253, 755
BstSLI GKGCMC 2 cut(s) 255, 756
BstUI CGCG 2 cut(s) 837, 1068
BstV1I GCAGC 1 cut(s) 223
BstV2I GAAGAC 1 cut(s) 401
Bsu15I ATCGAT 2 cut(s) 27, 393
BsuRI GGCC 7 cut(s) 56, 203, 301, 359, 754, 770, 801
BsuTUI ATCGAT 2 cut(s) 27, 393
BtsCI GGATG 5 cut(s) 5, 196, 219, 373, 994
BtsI GCAGTG 1 cut(s) 771
BtsIMutI CAGTG 2 cut(s) 45, 771
Cac8I GCNNGC 1 cut(s) 438
CfoI GCGC 2 cut(s) 651, 1070
Cfr10I RCCGGY 1 cut(s) 104
Cfr13I GGNCC 7 cut(s) 164, 275, 340, 663, 752, 753, 964
ClaI ATCGAT 2 cut(s) 27, 393
Csp6I GTAC 2 cut(s) 474, 943
CspAI ACCGGT 1 cut(s) 104
CviAII CATG 4 cut(s) 79, 566, 671, 1054
CviQI GTAC 2 cut(s) 474, 943
DdeI CTNAG 1 cut(s) 48
DpnI GATC 4 cut(s) 30, 180, 396, 1035
DpnII GATC 4 cut(s) 28, 178, 394, 1033
EaeI YGGCCR 2 cut(s) 357, 768
Eam1104I CTCTTC 1 cut(s) 246
EarI CTCTTC 1 cut(s) 246
EciI GGCGGA 1 cut(s) 212
Ecl136II GAGCTC 2 cut(s) 911, 1049
Eco130I CCWWGG 1 cut(s) 802
Eco24I GRGCYC 3 cut(s) 756, 913, 1051
Eco47I GGWCC 5 cut(s) 164, 275, 340, 663, 964
Eco53kI GAGCTC 2 cut(s) 911, 1049
Eco57I CTGAAG 1 cut(s) 227
Eco88I CYCGRG 2 cut(s) 174, 314
EcoICRI GAGCTC 2 cut(s) 911, 1049
EcoO109I RGGNCCY 2 cut(s) 164, 753
EcoRI GAATTC 2 cut(s) 701, 760
EcoRII CCWGG 2 cut(s) 65, 755
EcoT14I CCWWGG 1 cut(s) 802
EcoT38I GRGCYC 3 cut(s) 756, 913, 1051
ErhI CCWWGG 1 cut(s) 802
FaeI CATG 4 cut(s) 82, 569, 674, 1057
FaqI GGGAC 4 cut(s) 150, 213, 288, 633
FatI CATG 4 cut(s) 78, 565, 670, 1053
FauNDI CATATG 1 cut(s) 37
FblI GTMKAC 1 cut(s) 121
Fnu4HI GCNGC 4 cut(s) 237, 441, 444, 892
FokI GGATG 4 cut(s) 203, 206, 380, 981
FriOI GRGCYC 3 cut(s) 756, 913, 1051
Fsp4HI GCNGC 4 cut(s) 237, 441, 444, 892
FspBI CTAG 8 cut(s) 348, 423, 437, 515, 612, 698, 984, 1117
GlaI GCGC 2 cut(s) 650, 1069
GluI GCNGC 4 cut(s) 237, 441, 444, 892
GsaI CCCAGC 1 cut(s) 670
GsuI CTGGAG 3 cut(s) 451, 843, 1060
HaeIII GGCC 7 cut(s) 56, 203, 301, 359, 754, 770, 801
HapII CCGG 4 cut(s) 105, 188, 255, 487
HhaI GCGC 2 cut(s) 651, 1070
Hin1II CATG 4 cut(s) 82, 569, 674, 1057
Hin6I GCGC 2 cut(s) 649, 1068
HinP1I GCGC 2 cut(s) 649, 1068
HincII GTYRAC 1 cut(s) 122
HindII GTYRAC 1 cut(s) 122
HinfI GANTC 3 cut(s) 157, 866, 990
HpaII CCGG 4 cut(s) 105, 188, 255, 487
HphI GGTGA 3 cut(s) 55, 119, 851
Hpy166II GTNNAC 1 cut(s) 122
Hpy188I TCNGA 4 cut(s) 102, 344, 925, 964
Hpy188III TCNNGA 4 cut(s) 176, 314, 335, 457
Hpy8I GTNNAC 1 cut(s) 122
Hpy99I CGWCG 2 cut(s) 837, 1068
HpyAV CCTTC 3 cut(s) 46, 276, 1008
HpyCH4III ACNGT 1 cut(s) 656
HpyCH4IV ACGT 1 cut(s) 897
HpyCH4V TGCA 4 cut(s) 565, 714, 729, 795
HpyF10VI GCNNNNNNNGC 2 cut(s) 834, 1055
HpyF3I CTNAG 1 cut(s) 48
HpySE526I ACGT 1 cut(s) 897
Hsp92II CATG 4 cut(s) 82, 569, 674, 1057
HspAI GCGC 2 cut(s) 649, 1068
KflI GGGWCCC 1 cut(s) 164
Kzo9I GATC 4 cut(s) 28, 178, 394, 1033
LguI GCTCTTC 1 cut(s) 246
LmnI GCTCC 1 cut(s) 916
Lsp1109I GCAGC 1 cut(s) 223
LweI GCATC 3 cut(s) 14, 184, 358
MaeI CTAG 8 cut(s) 348, 423, 437, 515, 612, 698, 984, 1117
MaeII ACGT 1 cut(s) 897
MaeIII GTNAC 2 cut(s) 656, 1112
MalI GATC 4 cut(s) 30, 180, 396, 1035
MbiI CCGCTC 1 cut(s) 446
MboI GATC 4 cut(s) 28, 178, 394, 1033
MboII GAAGA 3 cut(s) 233, 401, 726
MhlI GDGCHC 4 cut(s) 255, 756, 913, 1051
MlsI TGGCCA 2 cut(s) 359, 770
MluCI AATT 5 cut(s) 507, 587, 701, 716, 760
MluNI TGGCCA 2 cut(s) 359, 770
MlyI GAGTC 1 cut(s) 166
MmeI TCCRAC 2 cut(s) 762, 942
MnlI CCTC 8 cut(s) 103, 183, 310, 331, 475, 677, 834, 867
Mox20I TGGCCA 2 cut(s) 359, 770
MroXI GAANNNNTTC 1 cut(s) 17
MscI TGGCCA 2 cut(s) 359, 770
Msp20I TGGCCA 2 cut(s) 359, 770
MspI CCGG 4 cut(s) 105, 188, 255, 487
MspR9I CCNGG 3 cut(s) 67, 255, 757
Mva1269I GAATGC 2 cut(s) 582, 692
MvaI CCWGG 2 cut(s) 67, 757
MvnI CGCG 2 cut(s) 837, 1068
MwoI GCNNNNNNNGC 2 cut(s) 834, 1055
NciI CCSGG 1 cut(s) 255
NdeI CATATG 1 cut(s) 37
NdeII GATC 4 cut(s) 28, 178, 394, 1033
NheI GCTAGC 1 cut(s) 436
NlaIII CATG 4 cut(s) 82, 569, 674, 1057
NlaIV GGNNCC 6 cut(s) 165, 166, 276, 665, 754, 966
PaeR7I CTCGAG 1 cut(s) 174
PciSI GCTCTTC 1 cut(s) 246
PctI GAATGC 2 cut(s) 582, 692
PdmI GAANNNNTTC 1 cut(s) 17
PfeI GAWTC 2 cut(s) 866, 990
PinAI ACCGGT 1 cut(s) 104
PkrI GCNGC 4 cut(s) 238, 442, 445, 893
PleI GAGTC 1 cut(s) 165
PpsI GAGTC 1 cut(s) 165
PpuMI RGGWCCY 1 cut(s) 164
Psp124BI GAGCTC 2 cut(s) 913, 1051
Psp5II RGGWCCY 1 cut(s) 164
Psp6I CCWGG 2 cut(s) 65, 755
PspFI CCCAGC 1 cut(s) 666
PspGI CCWGG 2 cut(s) 65, 755
PspN4I GGNNCC 6 cut(s) 165, 166, 276, 665, 754, 966
PspOMI GGGCCC 1 cut(s) 752
PspPI GGNCC 7 cut(s) 164, 275, 340, 663, 752, 753, 964
PspPPI RGGWCCY 1 cut(s) 164
RsaI GTAC 2 cut(s) 475, 944
RsaNI GTAC 2 cut(s) 474, 943
SacI GAGCTC 2 cut(s) 913, 1051
SalI GTCGAC 1 cut(s) 120
SapI GCTCTTC 1 cut(s) 246
SatI GCNGC 4 cut(s) 237, 441, 444, 892
Sau3AI GATC 4 cut(s) 28, 178, 394, 1033
Sau96I GGNCC 7 cut(s) 164, 275, 340, 663, 752, 753, 964
SchI GAGTC 1 cut(s) 166
ScrFI CCNGG 3 cut(s) 67, 255, 757
SduI GDGCHC 4 cut(s) 255, 756, 913, 1051
SfaNI GCATC 3 cut(s) 14, 184, 358
Sfr274I CTCGAG 1 cut(s) 174
SinI GGWCC 5 cut(s) 164, 275, 340, 663, 964
SlaI CTCGAG 1 cut(s) 174
SmlI CTYRAG 1 cut(s) 174
SmoI CTYRAG 1 cut(s) 174
Sse9I AATT 5 cut(s) 507, 587, 701, 716, 760
SsiI CCGC 7 cut(s) 223, 371, 434, 441, 444, 837, 892
SspI AATATT 1 cut(s) 325
SspMI CTAG 8 cut(s) 348, 423, 437, 515, 612, 698, 984, 1117
SstI GAGCTC 2 cut(s) 913, 1051
StyD4I CCNGG 3 cut(s) 65, 253, 755
StyI CCWWGG 1 cut(s) 802
TaaI ACNGT 1 cut(s) 656
TaiI ACGT 1 cut(s) 900
TaqI TCGA 8 cut(s) 27, 88, 121, 175, 393, 480, 864, 907
TasI AATT 5 cut(s) 507, 587, 701, 716, 760
TatI WGTACW 2 cut(s) 473, 942
TauI GCSGC 3 cut(s) 443, 446, 894
TfiI GAWTC 2 cut(s) 866, 990
TscAI CASTG 2 cut(s) 52, 778
TseI GCWGC 1 cut(s) 236
TspDTI ATGAA 3 cut(s) 54, 867, 1079
TspRI CASTG 2 cut(s) 52, 778
VpaK11BI GGWCC 5 cut(s) 164, 275, 340, 663, 964
XapI RAATTY 3 cut(s) 701, 716, 760
XcmI CCANNNNNNNNNTGG 1 cut(s) 1078
XhoI CTCGAG 1 cut(s) 174
XmiI GTMKAC 1 cut(s) 121
XmnI GAANNNNTTC 1 cut(s) 17
XspI CTAG 8 cut(s) 348, 423, 437, 515, 612, 698, 984, 1117
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.