Rmu_sc0000258.1_g000020

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000258.1
OG0000214
Physical Location & Seq
Forward (+)
105776 .. 108034
2259 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000258.1_g000020.1.cds

Sequence Viewer

Length: 1473 bp
atggctgtctctaaagcctatatttggtgtagtgtaccttctcgctcatcgcgtctagggaaacaaatccacgagcgtagggcaacacaaactactcggagcaggacagcctcagttcaggcttggaaacaaaaggcaatagcagaggagactcctgagggagagtcttctcatgataaagatcccgttgaggccactgctgtcttcgcttgcaaacgcgaacgagctcaattagtcgaagagagttttgaagatgacgaatctctgggaatgcgattggtccgtcagaggaccactgatccctttcgcctgagcgaggctggatcctcagccgctgtagaagagctaactctctcgctagttcaagcatcaactaaccccgtggcgcttcttccgtctcccacatctacagagcatctacaaggtcctaccattctaacaacgatctccgatgacgactccttgaagcatgaaagcgtggaaagccactctggggcttctgccgcttatgaggaattgatgacaacagagattctcgcggcactagaggtccaagaggtgaatgaggtggggcctcttcctcttggtgaccacgtaccaaatattgacccgacagctagagaggattctgtttgtaccgaggaggtggctgcaaacactgaaggtcttatcggtgggacagtcgccccagaaaatgatgctgaccttggtagtgccccccaagtctcgcgaacaaatgagacaaccgtcgaagctgagggctctgtgcttgaatctgctctacttgcctatggtaagccacgagttgagttgccagattctcccgcggctgaagggacagagcaacctgttgaagatgaagatgctgaggaagctgtccacccttttgcattggtggttcgtgatcttgtggcgcctcccccgcctcctcctcctcccactagattcgagagattgatgagggtgttggaggtaactcctcattctgctgtggatgaggctaagatggtgctttacgaacatctgggtcctcgggagaaggcattgaccctgcagcaatttagtgccattgacgttctactgaatgaacttggtagtgctcaccaacgtcaatcggcagcgaacgcccaggctcacgacgctcgagaggctttgaatagcctctctcgagaaatggacatctctcgcgataatttaaatgagcgagccatccgcctgcgggaactacaaatccaaaggtccgactataaacttcggatcaaggacctccaagcctgtttagcctttgttgagaatgcgattcttgtagaagaagttcaactcaatgaaactttggctgcttctgaagaaatgggccacaacctggcccgtatcagagaacgggccactcaggtcaaagttggtgccattgcggcgaaactccgcgtggaggaactttgcttgaaattgagcttcgcgggccaatctctgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

490

Amino Acids

53.42

Weight (kDa)

4.77

Isoelectric Point (pI)

52.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000214)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0079611
rosa_multiflora Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha Rh3DG208400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 913, 1403
AccB7I CCANNNNNTGG 1 cut(s) 1363
AccII CGCG 8 cut(s) 52, 219, 539, 730, 827, 1188, 1425, 1457
AclWI GGATC 5 cut(s) 176, 293, 318, 331, 1265
AcuI CTGAAG 3 cut(s) 681, 852, 1365
AcyI GRCGYC 1 cut(s) 914
AfaI GTAC 3 cut(s) 36, 597, 637
AfiI CCNNNNNNNGG 6 cut(s) 24, 316, 493, 1219, 1363, 1429
AgsI TTSAA 8 cut(s) 251, 365, 466, 773, 854, 1156, 1319, 1444
AjnI CCWGG 2 cut(s) 1128, 1362
AloI GAACNNNNNNTCC 2 cut(s) 1215, 1247
AluBI AGCT 6 cut(s) 227, 346, 617, 755, 875, 1452
AluI AGCT 6 cut(s) 227, 346, 617, 755, 875, 1452
Alw21I GWGCWC 2 cut(s) 229, 1102
Alw26I GTCTC 5 cut(s) 13, 143, 402, 730, 734
AlwI GGATC 5 cut(s) 176, 293, 318, 331, 1265
AlwNI CAGNNNCTG 1 cut(s) 335
Ama87I CYCGRG 3 cut(s) 1032, 1143, 1167
AoxI GGCC 6 cut(s) 192, 572, 1354, 1365, 1383, 1459
ApeKI GCWGC 4 cut(s) 650, 1054, 1118, 1337
Asp700I GAANNNNTTC 1 cut(s) 1314
AspLEI GCGC 2 cut(s) 388, 916
AsuHPI GGTGA 3 cut(s) 571, 599, 1094
AvaI CYCGRG 3 cut(s) 1032, 1143, 1167
AvaII GGWCC 7 cut(s) 280, 291, 425, 550, 1028, 1239, 1264
AxyI CCTNAGG 1 cut(s) 156
BaeGI GKGCMC 1 cut(s) 718
BamHI GGATCC 1 cut(s) 323
BanI GGYRCC 2 cut(s) 913, 1403
BanII GRGCYC 2 cut(s) 229, 764
BarI GAAGNNNNNNTAC 2 cut(s) 22, 54
BauI CACGAG 2 cut(s) 71, 801
BbsI GAAGAC 2 cut(s) 159, 196
Bbv12I GWGCWC 2 cut(s) 229, 1102
BbvCI CCTCAGC 3 cut(s) 328, 756, 867
BbvI GCAGC 4 cut(s) 637, 1066, 1130, 1324
BccI CCATC 2 cut(s) 1000, 1217
BciT130I CCWGG 2 cut(s) 1130, 1364
BcoDI GTCTC 5 cut(s) 13, 143, 402, 730, 734
BfaI CTAG 5 cut(s) 56, 359, 545, 618, 942
BfmI CTRYAG 4 cut(s) 336, 408, 1052, 1469
BfoI RGCGCY 2 cut(s) 389, 917
BglI GCCNNNNNGGC 1 cut(s) 1412
BisI GCNGC 9 cut(s) 333, 504, 540, 651, 828, 1055, 1119, 1338, 1413
BlsI GCNGC 9 cut(s) 334, 505, 541, 652, 829, 1056, 1120, 1339, 1414
Bme1390I CCNGG 2 cut(s) 1130, 1364
Bme18I GGWCC 7 cut(s) 280, 291, 425, 550, 1028, 1239, 1264
BmeT110I CYCGRG 3 cut(s) 1032, 1143, 1167
BmiI GGNNCC 5 cut(s) 325, 573, 915, 1029, 1405
BmrFI CCNGG 2 cut(s) 1130, 1364
BmsI GCATC 4 cut(s) 377, 424, 688, 853
BoxI GACNNNNGTC 1 cut(s) 746
BpiI GAAGAC 2 cut(s) 159, 196
Bpu10I CCTNAGC 4 cut(s) 311, 328, 756, 867
BsaAI YACGTR 1 cut(s) 595
BsaBI GATNNNNATC 1 cut(s) 180
BsaHI GRCGYC 1 cut(s) 914
BsaJI CCNNGG 6 cut(s) 381, 639, 706, 825, 1031, 1128
Bsc4I CCNNNNNNNGG 6 cut(s) 24, 316, 493, 1219, 1363, 1429
Bse21I CCTNAGG 1 cut(s) 156
Bse3DI GCAATG 1 cut(s) 1407
Bse8I GATNNNNATC 1 cut(s) 180
BseBI CCWGG 2 cut(s) 1130, 1364
BseDI CCNNGG 6 cut(s) 381, 639, 706, 825, 1031, 1128
BseGI GGATG 2 cut(s) 1000, 1209
BseJI GATNNNNATC 1 cut(s) 180
BseLI CCNNNNNNNGG 6 cut(s) 24, 316, 493, 1219, 1363, 1429
BseMI GCAATG 1 cut(s) 1407
BseMII CTCAG 7 cut(s) 126, 147, 302, 342, 747, 858, 1403
BseRI GAGGAG 6 cut(s) 161, 656, 918, 921, 924, 969
BseSI GKGCMC 1 cut(s) 718
BseXI GCAGC 4 cut(s) 637, 1066, 1130, 1324
Bsh1236I CGCG 8 cut(s) 52, 219, 539, 730, 827, 1188, 1425, 1457
BshFI GGCC 6 cut(s) 194, 574, 1356, 1367, 1385, 1461
BshNI GGYRCC 2 cut(s) 913, 1403
BsiHKAI GWGCWC 2 cut(s) 229, 1102
BsiHKCI CYCGRG 3 cut(s) 1032, 1143, 1167
BslFI GGGAC 2 cut(s) 691, 850
BslI CCNNNNNNNGG 6 cut(s) 24, 316, 493, 1219, 1363, 1429
BsmAI GTCTC 5 cut(s) 13, 143, 402, 730, 734
BsmBI CGTCTC 1 cut(s) 402
BsmFI GGGAC 2 cut(s) 691, 850
BsmI GAATGC 2 cut(s) 276, 1300
BsnI GGCC 6 cut(s) 194, 574, 1356, 1367, 1385, 1461
BsoBI CYCGRG 3 cut(s) 1032, 1143, 1167
Bsp1286I GDGCHC 4 cut(s) 229, 718, 764, 1102
Bsp143I GATC 6 cut(s) 181, 298, 323, 444, 904, 1257
Bsp68I TCGCGA 2 cut(s) 730, 1188
BspANI GGCC 6 cut(s) 194, 574, 1356, 1367, 1385, 1461
BspCNI CTCAG 7 cut(s) 125, 148, 303, 341, 748, 859, 1402
BspFNI CGCG 8 cut(s) 52, 219, 539, 730, 827, 1188, 1425, 1457
BspHI TCATGA 1 cut(s) 172
BspLI GGNNCC 5 cut(s) 325, 573, 915, 1029, 1405
BspMAI CTGCAG 1 cut(s) 1056
BspPI GGATC 5 cut(s) 176, 293, 318, 331, 1265
BspQI GCTCTTC 1 cut(s) 336
BspT107I GGYRCC 2 cut(s) 913, 1403
BsrDI GCAATG 1 cut(s) 1407
BssECI CCNNGG 6 cut(s) 381, 639, 706, 825, 1031, 1128
BssMI GATC 6 cut(s) 181, 298, 323, 444, 904, 1257
BssNI GRCGYC 1 cut(s) 914
BssSI CACGAG 2 cut(s) 71, 801
BssT1I CCWWGG 1 cut(s) 706
Bst2BI CACGAG 2 cut(s) 71, 801
Bst2UI CCWGG 2 cut(s) 1130, 1364
Bst4CI ACNGT 2 cut(s) 682, 748
Bst6I CTCTTC 3 cut(s) 234, 336, 582
BstACI GRCGYC 1 cut(s) 914
BstBAI YACGTR 1 cut(s) 595
BstC8I GCNNGC 4 cut(s) 211, 1206, 1217, 1459
BstDEI CTNAG 8 cut(s) 112, 156, 311, 328, 756, 867, 1002, 1389
BstDSI CCRYGG 2 cut(s) 381, 825
BstEII GGTNACC 1 cut(s) 587
BstENI CCTNNNNNAGG 1 cut(s) 314
BstF5I GGATG 2 cut(s) 1000, 1209
BstFNI CGCG 8 cut(s) 52, 219, 539, 730, 827, 1188, 1425, 1457
BstH2I RGCGCY 2 cut(s) 389, 917
BstHHI GCGC 2 cut(s) 388, 916
BstKTI GATC 6 cut(s) 184, 301, 326, 447, 907, 1260
BstMAI GTCTC 5 cut(s) 13, 143, 402, 730, 734
BstMBI GATC 6 cut(s) 181, 298, 323, 444, 904, 1257
BstNI CCWGG 2 cut(s) 1130, 1364
BstPAI GACNNNNGTC 1 cut(s) 746
BstPI GGTNACC 1 cut(s) 587
BstSCI CCNGG 2 cut(s) 1128, 1362
BstSFI CTRYAG 4 cut(s) 336, 408, 1052, 1469
BstSLI GKGCMC 1 cut(s) 718
BstUI CGCG 8 cut(s) 52, 219, 539, 730, 827, 1188, 1425, 1457
BstV1I GCAGC 4 cut(s) 637, 1066, 1130, 1324
BstV2I GAAGAC 2 cut(s) 159, 196
BstX2I RGATCY 2 cut(s) 181, 323
BstYI RGATCY 2 cut(s) 181, 323
Bsu36I CCTNAGG 1 cut(s) 156
BsuRI GGCC 6 cut(s) 194, 574, 1356, 1367, 1385, 1461
BtgI CCRYGG 2 cut(s) 381, 825
BtgZI GCGATG 1 cut(s) 33
BtsCI GGATG 2 cut(s) 1000, 1209
BtsI GCAGTG 1 cut(s) 195
BtsIMutI CAGTG 3 cut(s) 195, 294, 657
BtuMI TCGCGA 2 cut(s) 730, 1188
Cac8I GCNNGC 4 cut(s) 211, 1206, 1217, 1459
CaiI CAGNNNCTG 1 cut(s) 335
CciI TCATGA 1 cut(s) 172
CfoI GCGC 2 cut(s) 388, 916
Cfr42I CCGCGG 1 cut(s) 828
CseI GACGC 2 cut(s) 41, 1148
Csp6I GTAC 3 cut(s) 35, 596, 636
CviAII CATG 2 cut(s) 173, 470
CviQI GTAC 3 cut(s) 35, 596, 636
DdeI CTNAG 8 cut(s) 112, 156, 311, 328, 756, 867, 1002, 1389
DinI GGCGCC 1 cut(s) 915
DpnI GATC 6 cut(s) 183, 300, 325, 446, 906, 1259
DpnII GATC 6 cut(s) 181, 298, 323, 444, 904, 1257
DraI TTTAAA 1 cut(s) 1197
Eam1104I CTCTTC 3 cut(s) 234, 336, 582
EarI CTCTTC 3 cut(s) 234, 336, 582
EciI GGCGGA 1 cut(s) 1202
Ecl136II GAGCTC 1 cut(s) 227
Eco130I CCWWGG 1 cut(s) 706
Eco24I GRGCYC 2 cut(s) 229, 764
Eco47I GGWCC 7 cut(s) 280, 291, 425, 550, 1028, 1239, 1264
Eco53kI GAGCTC 1 cut(s) 227
Eco57I CTGAAG 3 cut(s) 681, 852, 1365
Eco81I CCTNAGG 1 cut(s) 156
Eco88I CYCGRG 3 cut(s) 1032, 1143, 1167
Eco91I GGTNACC 1 cut(s) 587
EcoICRI GAGCTC 1 cut(s) 227
EcoNI CCTNNNNNAGG 1 cut(s) 314
EcoO109I RGGNCCY 4 cut(s) 425, 572, 1028, 1264
EcoO65I GGTNACC 1 cut(s) 587
EcoRII CCWGG 2 cut(s) 1128, 1362
EcoT14I CCWWGG 1 cut(s) 706
EcoT38I GRGCYC 2 cut(s) 229, 764
EgeI GGCGCC 1 cut(s) 915
EheI GGCGCC 1 cut(s) 915
ErhI CCWWGG 1 cut(s) 706
Esp3I CGTCTC 1 cut(s) 402
FaeI CATG 2 cut(s) 176, 473
FaiI YATR 6 cut(s) 21, 174, 471, 510, 792, 1248
FaqI GGGAC 2 cut(s) 691, 850
FatI CATG 2 cut(s) 172, 469
FauI CCCGC 4 cut(s) 832, 930, 1212, 1450
Fnu4HI GCNGC 9 cut(s) 333, 504, 540, 651, 828, 1055, 1119, 1338, 1413
FokI GGATG 2 cut(s) 1007, 1196
FriOI GRGCYC 2 cut(s) 229, 764
Fsp4HI GCNGC 9 cut(s) 333, 504, 540, 651, 828, 1055, 1119, 1338, 1413
FspBI CTAG 5 cut(s) 56, 359, 545, 618, 942
GlaI GCGC 2 cut(s) 387, 915
GluI GCNGC 9 cut(s) 333, 504, 540, 651, 828, 1055, 1119, 1338, 1413
HaeII RGCGCY 2 cut(s) 389, 917
HaeIII GGCC 6 cut(s) 194, 574, 1356, 1367, 1385, 1461
HgaI GACGC 2 cut(s) 41, 1148
HhaI GCGC 2 cut(s) 388, 916
Hin1I GRCGYC 1 cut(s) 914
Hin1II CATG 2 cut(s) 176, 473
Hin6I GCGC 2 cut(s) 386, 914
HinP1I GCGC 2 cut(s) 386, 914
HphI GGTGA 3 cut(s) 571, 599, 1094
Hpy166II GTNNAC 2 cut(s) 35, 880
Hpy188I TCNGA 7 cut(s) 99, 288, 451, 1243, 1257, 1345, 1376
Hpy8I GTNNAC 2 cut(s) 35, 880
Hpy99I CGWCG 2 cut(s) 752, 1142
HpyAV CCTTC 4 cut(s) 48, 656, 827, 1033
HpyCH4III ACNGT 2 cut(s) 682, 748
HpyCH4IV ACGT 3 cut(s) 594, 1074, 1108
HpyCH4V TGCA 4 cut(s) 213, 653, 890, 1054
HpyF3I CTNAG 8 cut(s) 112, 156, 311, 328, 756, 867, 1002, 1389
HpySE526I ACGT 3 cut(s) 594, 1074, 1108
Hsp92I GRCGYC 1 cut(s) 914
Hsp92II CATG 2 cut(s) 176, 473
HspAI GCGC 2 cut(s) 386, 914
KasI GGCGCC 1 cut(s) 913
KspI CCGCGG 1 cut(s) 828
Kzo9I GATC 6 cut(s) 181, 298, 323, 444, 904, 1257
LguI GCTCTTC 1 cut(s) 336
LmnI GCTCC 1 cut(s) 99
Lsp1109I GCAGC 4 cut(s) 637, 1066, 1130, 1324
LweI GCATC 4 cut(s) 377, 424, 688, 853
MaeI CTAG 5 cut(s) 56, 359, 545, 618, 942
MaeII ACGT 3 cut(s) 594, 1074, 1108
MaeIII GTNAC 2 cut(s) 587, 973
MalI GATC 6 cut(s) 183, 300, 325, 446, 906, 1259
MboI GATC 6 cut(s) 181, 298, 323, 444, 904, 1257
MflI RGATCY 2 cut(s) 181, 323
MhlI GDGCHC 4 cut(s) 229, 718, 764, 1102
MluCI AATT 5 cut(s) 230, 515, 1058, 1192, 1445
Mly113I GGCGCC 1 cut(s) 914
MlyI GAGTC 3 cut(s) 145, 173, 452
MmeI TCCRAC 2 cut(s) 948, 1266
MroXI GAANNNNTTC 1 cut(s) 1314
MseI TTAA 1 cut(s) 1196
MspA1I CMGCKG 2 cut(s) 335, 827
MspR9I CCNGG 2 cut(s) 1130, 1364
Mva1269I GAATGC 2 cut(s) 276, 1300
MvaI CCWGG 2 cut(s) 1130, 1364
MvnI CGCG 8 cut(s) 52, 219, 539, 730, 827, 1188, 1425, 1457
NarI GGCGCC 1 cut(s) 914
NdeII GATC 6 cut(s) 181, 298, 323, 444, 904, 1257
NlaIII CATG 2 cut(s) 176, 473
NlaIV GGNNCC 5 cut(s) 325, 573, 915, 1029, 1405
NmuCI GTSAC 1 cut(s) 587
NruI TCGCGA 2 cut(s) 730, 1188
PaeR7I CTCGAG 2 cut(s) 1143, 1167
PagI TCATGA 1 cut(s) 172
PciSI GCTCTTC 1 cut(s) 336
PcsI WCGNNNNNNNCGW 1 cut(s) 49
PctI GAATGC 2 cut(s) 276, 1300
PdmI GAANNNNTTC 1 cut(s) 1314
PfeI GAWTC 7 cut(s) 260, 532, 626, 773, 818, 945, 1300
PflMI CCANNNNNTGG 1 cut(s) 1363
PkrI GCNGC 9 cut(s) 334, 505, 541, 652, 829, 1056, 1120, 1339, 1414
PleI GAGTC 3 cut(s) 145, 172, 452
PluTI GGCGCC 1 cut(s) 917
PpsI GAGTC 3 cut(s) 145, 172, 452
Ppu21I YACGTR 1 cut(s) 595
PpuMI RGGWCCY 3 cut(s) 425, 1028, 1264
PshAI GACNNNNGTC 1 cut(s) 746
Psp124BI GAGCTC 1 cut(s) 229
Psp5II RGGWCCY 3 cut(s) 425, 1028, 1264
Psp6I CCWGG 2 cut(s) 1128, 1362
PspEI GGTNACC 1 cut(s) 587
PspGI CCWGG 2 cut(s) 1128, 1362
PspN4I GGNNCC 5 cut(s) 325, 573, 915, 1029, 1405
PspPPI RGGWCCY 3 cut(s) 425, 1028, 1264
PsrI GAACNNNNNNTAC 2 cut(s) 1299, 1331
PstI CTGCAG 1 cut(s) 1056
PstNI CAGNNNCTG 1 cut(s) 335
PsuI RGATCY 2 cut(s) 181, 323
RruI TCGCGA 2 cut(s) 730, 1188
RsaI GTAC 3 cut(s) 36, 597, 637
RsaNI GTAC 3 cut(s) 35, 596, 636
SacI GAGCTC 1 cut(s) 229
SacII CCGCGG 1 cut(s) 828
SapI GCTCTTC 1 cut(s) 336
SaqAI TTAA 1 cut(s) 1196
SatI GCNGC 9 cut(s) 333, 504, 540, 651, 828, 1055, 1119, 1338, 1413
Sau3AI GATC 6 cut(s) 181, 298, 323, 444, 904, 1257
SchI GAGTC 3 cut(s) 145, 173, 452
ScrFI CCNGG 2 cut(s) 1130, 1364
SduI GDGCHC 4 cut(s) 229, 718, 764, 1102
SfaNI GCATC 4 cut(s) 377, 424, 688, 853
SfcI CTRYAG 4 cut(s) 336, 408, 1052, 1469
SfoI GGCGCC 1 cut(s) 915
Sfr274I CTCGAG 2 cut(s) 1143, 1167
Sfr303I CCGCGG 1 cut(s) 828
SgrBI CCGCGG 1 cut(s) 828
SinI GGWCC 7 cut(s) 280, 291, 425, 550, 1028, 1239, 1264
SlaI CTCGAG 2 cut(s) 1143, 1167
SmiI ATTTAAAT 1 cut(s) 1197
SmlI CTYRAG 2 cut(s) 1143, 1167
SmoI CTYRAG 2 cut(s) 1143, 1167
Sse9I AATT 5 cut(s) 230, 515, 1058, 1192, 1445
SspDI GGCGCC 1 cut(s) 913
SspI AATATT 1 cut(s) 604
SspMI CTAG 5 cut(s) 56, 359, 545, 618, 942
SstI GAGCTC 1 cut(s) 229
StyD4I CCNGG 2 cut(s) 1128, 1362
StyI CCWWGG 1 cut(s) 706
SwaI ATTTAAAT 1 cut(s) 1197
TaaI ACNGT 2 cut(s) 682, 748
TaiI ACGT 3 cut(s) 597, 1077, 1111
TaqI TCGA 5 cut(s) 237, 750, 948, 1144, 1168
TasI AATT 5 cut(s) 230, 515, 1058, 1192, 1445
TauI GCSGC 5 cut(s) 335, 506, 542, 830, 1415
TfiI GAWTC 7 cut(s) 260, 532, 626, 773, 818, 945, 1300
Tru1I TTAA 1 cut(s) 1196
Tru9I TTAA 1 cut(s) 1196
TscAI CASTG 3 cut(s) 202, 301, 664
TseFI GTSAC 1 cut(s) 587
TseI GCWGC 4 cut(s) 650, 1054, 1118, 1337
Tsp45I GTSAC 1 cut(s) 587
TspDTI ATGAA 4 cut(s) 486, 873, 1101, 1341
TspGWI ACGGA 2 cut(s) 272, 384
TspRI CASTG 3 cut(s) 202, 301, 664
Van91I CCANNNNNTGG 1 cut(s) 1363
VpaK11BI GGWCC 7 cut(s) 280, 291, 425, 550, 1028, 1239, 1264
XagI CCTNNNNNAGG 1 cut(s) 314
XhoI CTCGAG 2 cut(s) 1143, 1167
XmnI GAANNNNTTC 1 cut(s) 1314
XspI CTAG 5 cut(s) 56, 359, 545, 618, 942
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.