Rmu_sc0001094.1_g000015

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001094.1
OG0000214
Physical Location & Seq
Forward (+)
89133 .. 92221
3089 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001094.1_g000015.1.cds

Sequence Viewer

Length: 2388 bp
atgggtgttcgatgcagaagtcagacaggagaggagagaagtcgactgatgggctttggtggaggtgataatcaaaagttgggggccaaggaggaaagtgggtttctggcttacctcactcccgaggaaaatgtttggtatcaggagatccgagcgagagatttggcccgttgggatgctctgggtatcacccaaaccattaatctatgcttctgcctttcccataataccaaccctgcactactagccgccgctctttgcttctggaacacctccggcaataccttcgatttccagtttaggcagatgagcataactctgctggatgttcttaccatcacggggttgcccattgactttgacccctatatgcatggtcagtttgatggcgttcaatttcttttgagaatggatatggttggtcgggggcatcgcagcaaatcctacccattctggcgcaactattactacacccagcgtgaccacacaggaggtatcgcattcctggaattctggttttgcaaatttatctttgccacttcttccaacaaacctactgggccctggaattctctggccactgctttctacaatggtatttgcgttggccttgggcaacctgtattgggtgtgttatatagctccctttataaagatgtaatgtgcccctttgatacagacattaatggccctttctggatcctcgccttttggctgcagatttatttccctcgcttcagtcgcggtgatattccaaaggatcctccagtcgattcccttttggggaattggctttgctataacgtaaggtatcgagctccaccctactctgagtgttttatttacttgtacttgctggaagagatgccggacccaaaaatagtcatttctaggctattccctcctccccttgatgatggctttctgcccagtggatgggaacatagcaaaagagccctcctggcctttcgttgtgccatctcctgcttggatattagtcttaccaccgatggagtaagctacgagctctatgcccctaaccactttgctagccaatttgtggcccagttggtaccctggcctctggttgattatgccaattactacacctcttggcggagattagccccgcctggggtcatggcgttgtaccccctcgacaatgtcgacgatgattatgctgattggtggaaagaagtgtccgtgaactgttgggactttccatatgacgaactcttcgccctgatctttcgtggcatgagtagtcctggtctggaggaccgcaagattcttgagtgcttctccaaccctacagcacaacccacgcgacctattctaccttctcgctcatcacgtccagggataaaaatccacgagcctagggtaacagtcgggaaacaaaaggcaatagcaaaggagactcctgagggtgtgtcttcttatgatgaagatcccgctgaggtccatcagaggaccactaatccctctcgcctgagcgaggctggatcctcaactgttgtagaagagccaactctctttctagttcaagcatcaactagccccgtggcgcctcttccctttctcacatctacagagcatccgcaaggtcctaccattctaatcacgatctccgacgacgactccccggagcatgaaagcatggaaagccactctgaggcttctaccgcttatgaggaactaatgacgacagagattcccgtggcactagaggtccaagaggtgaatgaagcggggcctcttcctcttggtgaccacataccagatatcgacccgacagctcgagaggaggtggtccttgacaccaaagctctggccggcgggacatacatcccaggtttgggggatgaggcgagcagtagtggtctcttgatttcagaaatagacgaggcgagtgttgaggctgaaagttctgctctcgtagctactcatttccaacactctactaatgaacatcacattgaatttccagagtctcctgcggctgagatgtcagaccaagctcagggggtcgttgaggggaattatgctgaagacgaaataattgaggaaccaatcgaccttctagcattggtgacttatgatccgaggacagagcttcgaaaccttttgggacagcggcggctggggcctgaaaaactccccaggatttgggaagccattgtgttccttcgtagagagcatgcagtcaatccaactcagctcgacactgtagagaagctgttgaaagaccttgatgtggcccgcgctccccaatctatagtggaggctcgagctcgtgtggcacgcgtggtacgaaataacctcgctagtcagatggaggctcttcacggcaccttgaataatcgggccactagcatggggggataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

795

Amino Acids

89.03

Weight (kDa)

4.77

Isoelectric Point (pI)

50.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000214)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0079611
rosa_multiflora Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha Rh3DG208400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 651
Acc65I GGTACC 1 cut(s) 1072
AccB1I GGYRCC 3 cut(s) 1072, 1567, 2351
AccB7I CCANNNNNTGG 3 cut(s) 936, 1060, 2169
AccBSI CCGCTC 1 cut(s) 254
AccI GTMKAC 2 cut(s) 43, 1167
AccII CGCG 4 cut(s) 744, 1327, 2265, 2307
AclWI GGATC 9 cut(s) 142, 694, 707, 755, 768, 1445, 1500, 1513, 2096
AcoI YGGCCR 2 cut(s) 576, 1833
AcsI RAATTY 4 cut(s) 509, 524, 568, 1982
AcuI CTGAAG 2 cut(s) 721, 2070
AcyI GRCGYC 1 cut(s) 1568
AfaI GTAC 4 cut(s) 851, 1074, 1151, 2313
AflIII ACRYGT 1 cut(s) 2305
AgsI TTSAA 5 cut(s) 395, 1547, 1982, 2245, 2359
AjiI CACGTC 1 cut(s) 1355
AjnI CCWGG 9 cut(s) 504, 563, 960, 1076, 1132, 1267, 1357, 1852, 2162
Alw21I GWGCWC 3 cut(s) 820, 1029, 2296
Alw26I GTCTC 3 cut(s) 1412, 1889, 1998
AlwI GGATC 9 cut(s) 142, 694, 707, 755, 768, 1445, 1500, 1513, 2096
Ama87I CYCGRG 3 cut(s) 122, 1800, 2289
ApaI GGGCCC 1 cut(s) 564
ApeKI GCWGC 2 cut(s) 435, 715
ApoI RAATTY 4 cut(s) 509, 524, 568, 1982
ArsI GACNNNNNNTTYG 2 cut(s) 1220, 1252
AseI ATTAAT 2 cut(s) 201, 684
Asp718I GGTACC 1 cut(s) 1072
AspA2I CCTAGG 1 cut(s) 1379
AspLEI GCGC 3 cut(s) 459, 1570, 2267
AsuC2I CCSGG 1 cut(s) 1646
AsuHPI GGTGA 6 cut(s) 77, 181, 758, 1753, 1781, 2104
AsuII TTCGAA 1 cut(s) 2119
AsuNHI GCTAGC 1 cut(s) 1049
AvaI CYCGRG 3 cut(s) 122, 1800, 2289
AvaII GGWCC 7 cut(s) 871, 1279, 1462, 1473, 1607, 1732, 1813
AvrII CCTAGG 1 cut(s) 1379
AxyI CCTNAGG 1 cut(s) 1425
BaeGI GKGCMC 2 cut(s) 564, 668
BalI TGGCCA 1 cut(s) 578
BamHI GGATCC 3 cut(s) 699, 760, 1505
BanI GGYRCC 3 cut(s) 1072, 1567, 2351
BanII GRGCYC 5 cut(s) 564, 820, 958, 1029, 2296
BauI CACGAG 2 cut(s) 1373, 2295
BbsI GAAGAC 2 cut(s) 1428, 2058
Bbv12I GWGCWC 3 cut(s) 820, 1029, 2296
BbvCI CCTCAGC 1 cut(s) 1458
BbvI GCAGC 2 cut(s) 447, 702
BccI CCATC 9 cut(s) 43, 344, 380, 911, 930, 986, 1004, 1473, 2329
BceAI ACGGC 1 cut(s) 2365
BcgI CGANNNNNNTGC 6 cut(s) 268, 302, 1013, 1047, 1160, 1194
BciT130I CCWGG 9 cut(s) 506, 565, 962, 1078, 1134, 1269, 1359, 1854, 2164
BcnI CCSGG 1 cut(s) 1646
BcoDI GTCTC 3 cut(s) 1412, 1889, 1998
BfmI CTRYAG 5 cut(s) 716, 1311, 1590, 2229, 2277
BfoI RGCGCY 1 cut(s) 1571
BglI GCCNNNNNGGC 1 cut(s) 962
BisI GCNGC 7 cut(s) 249, 252, 436, 716, 2001, 2138, 2141
BlnI CCTAGG 1 cut(s) 1379
BlsI GCNGC 7 cut(s) 250, 253, 437, 717, 2002, 2139, 2142
Bme18I GGWCC 7 cut(s) 871, 1279, 1462, 1473, 1607, 1732, 1813
BmeT110I CYCGRG 3 cut(s) 122, 1800, 2289
BmgBI CACGTC 1 cut(s) 1355
BmrI ACTGGG 3 cut(s) 567, 924, 1060
BmsI GCATC 6 cut(s) 2, 166, 439, 855, 1559, 1606
BmtI GCTAGC 1 cut(s) 1053
BmuI ACTGGG 3 cut(s) 567, 924, 1060
BpiI GAAGAC 2 cut(s) 1428, 2058
BplI GAGNNNNNCTC 4 cut(s) 301, 333, 1286, 1318
BpmI CTGGAG 2 cut(s) 750, 1295
Bpu10I CCTNAGC 3 cut(s) 1458, 1493, 2022
Bpu14I TTCGAA 1 cut(s) 2119
BpuEI CTTGAG 1 cut(s) 1313
BpuMI CCSGG 1 cut(s) 1646
BsaBI GATNNNNATC 2 cut(s) 1367, 1449
BsaHI GRCGYC 1 cut(s) 1568
BsaI GGTCTC 1 cut(s) 1889
BsaXI ACNNNNNCTCC 2 cut(s) 1625, 1655
Bse118I RCCGGY 1 cut(s) 1835
Bse1I ACTGG 5 cut(s) 295, 562, 767, 930, 1066
Bse21I CCTNAGG 1 cut(s) 1425
Bse8I GATNNNNATC 2 cut(s) 1367, 1449
BseBI CCWGG 9 cut(s) 506, 565, 962, 1078, 1134, 1269, 1359, 1854, 2164
BseGI GGATG 6 cut(s) 181, 331, 941, 1597, 1848, 1870
BseJI GATNNNNATC 2 cut(s) 1367, 1449
BseMII CTCAG 8 cut(s) 822, 1416, 1449, 1484, 1665, 1995, 2036, 2231
BseNI ACTGG 5 cut(s) 295, 562, 767, 930, 1066
BseRI GAGGAG 3 cut(s) 47, 894, 1820
BseSI GKGCMC 2 cut(s) 564, 668
BseXI GCAGC 2 cut(s) 447, 702
BseYI CCCAGC 2 cut(s) 474, 2143
BsgI GTGCAG 1 cut(s) 222
Bsh1236I CGCG 4 cut(s) 744, 1327, 2265, 2307
BshNI GGYRCC 3 cut(s) 1072, 1567, 2351
BsiHKAI GWGCWC 3 cut(s) 820, 1029, 2296
BsiHKCI CYCGRG 3 cut(s) 122, 1800, 2289
BsiSI CCGG 4 cut(s) 276, 869, 1646, 1836
BslFI GGGAC 3 cut(s) 1229, 1855, 2145
BsmAI GTCTC 3 cut(s) 1412, 1889, 1998
BsmFI GGGAC 3 cut(s) 1229, 1855, 2145
BsmI GAATGC 1 cut(s) 500
Bso31I GGTCTC 1 cut(s) 1889
BsoBI CYCGRG 3 cut(s) 122, 1800, 2289
Bsp119I TTCGAA 1 cut(s) 2119
Bsp120I GGGCCC 1 cut(s) 560
Bsp1286I GDGCHC 6 cut(s) 564, 668, 820, 958, 1029, 2296
Bsp143I GATC 8 cut(s) 147, 699, 760, 1245, 1450, 1505, 1626, 2101
BspCNI CTCAG 8 cut(s) 823, 1417, 1450, 1485, 1666, 1996, 2035, 2230
BspFNI CGCG 4 cut(s) 744, 1327, 2265, 2307
BspMAI CTGCAG 1 cut(s) 720
BspOI GCTAGC 1 cut(s) 1053
BspPI GGATC 9 cut(s) 142, 694, 707, 755, 768, 1445, 1500, 1513, 2096
BspQI GCTCTTC 2 cut(s) 1518, 2349
BspT104I TTCGAA 1 cut(s) 2119
BspT107I GGYRCC 3 cut(s) 1072, 1567, 2351
BspTNI GGTCTC 1 cut(s) 1889
BsrBI CCGCTC 1 cut(s) 254
BsrFI RCCGGY 1 cut(s) 1835
BsrI ACTGG 5 cut(s) 295, 562, 767, 930, 1066
BssAI RCCGGY 1 cut(s) 1835
BssMI GATC 8 cut(s) 147, 699, 760, 1245, 1450, 1505, 1626, 2101
BssNI GRCGYC 1 cut(s) 1568
BssSI CACGAG 2 cut(s) 1373, 2295
BssT1I CCWWGG 3 cut(s) 87, 610, 1379
Bst2BI CACGAG 2 cut(s) 1373, 2295
Bst2UI CCWGG 9 cut(s) 506, 565, 962, 1078, 1134, 1269, 1359, 1854, 2164
Bst4CI ACNGT 4 cut(s) 1211, 1390, 1516, 2230
Bst6I CTCTTC 6 cut(s) 855, 1241, 1518, 1578, 1764, 2349
BstACI GRCGYC 1 cut(s) 1568
BstBI TTCGAA 1 cut(s) 2119
BstC8I GCNNGC 6 cut(s) 1051, 1837, 1873, 2202, 2263, 2305
BstDEI CTNAG 8 cut(s) 831, 1425, 1458, 1493, 1674, 2004, 2022, 2217
BstDSI CCRYGG 2 cut(s) 1563, 1719
BstEII GGTNACC 1 cut(s) 1769
BstENI CCTNNNNNAGG 1 cut(s) 1496
BstF5I GGATG 6 cut(s) 181, 331, 941, 1597, 1848, 1870
BstFNI CGCG 4 cut(s) 744, 1327, 2265, 2307
BstH2I RGCGCY 1 cut(s) 1571
BstHHI GCGC 3 cut(s) 459, 1570, 2267
BstKTI GATC 8 cut(s) 150, 702, 763, 1248, 1453, 1508, 1629, 2104
BstMAI GTCTC 3 cut(s) 1412, 1889, 1998
BstMBI GATC 8 cut(s) 147, 699, 760, 1245, 1450, 1505, 1626, 2101
BstMWI GCNNNNNNNGC 8 cut(s) 245, 741, 962, 1665, 1685, 1940, 2146, 2300
BstNI CCWGG 9 cut(s) 506, 565, 962, 1078, 1134, 1269, 1359, 1854, 2164
BstNSI RCATGY 1 cut(s) 2204
BstPI GGTNACC 1 cut(s) 1769
BstSFI CTRYAG 5 cut(s) 716, 1311, 1590, 2229, 2277
BstSLI GKGCMC 2 cut(s) 564, 668
BstUI CGCG 4 cut(s) 744, 1327, 2265, 2307
BstV1I GCAGC 2 cut(s) 447, 702
BstV2I GAAGAC 2 cut(s) 1428, 2058
BstX2I RGATCY 5 cut(s) 147, 699, 760, 1450, 1505
BstXI CCANNNNNNTGG 2 cut(s) 1831, 2377
BstYI RGATCY 5 cut(s) 147, 699, 760, 1450, 1505
Bsu36I CCTNAGG 1 cut(s) 1425
BtgI CCRYGG 2 cut(s) 1563, 1719
BtgZI GCGATG 1 cut(s) 416
BtrI CACGTC 1 cut(s) 1355
BtsCI GGATG 6 cut(s) 181, 331, 941, 1597, 1848, 1870
BtsI GCAGTG 1 cut(s) 579
BtsIMutI CAGTG 3 cut(s) 579, 937, 2226
Cac8I GCNNGC 6 cut(s) 1051, 1837, 1873, 2202, 2263, 2305
CfoI GCGC 3 cut(s) 459, 1570, 2267
Cfr10I RCCGGY 1 cut(s) 1835
Csp6I GTAC 4 cut(s) 850, 1073, 1150, 2312
CviAII CATG 7 cut(s) 374, 1141, 1258, 1652, 1660, 2201, 2377
CviQI GTAC 4 cut(s) 850, 1073, 1150, 2312
DdeI CTNAG 8 cut(s) 831, 1425, 1458, 1493, 1674, 2004, 2022, 2217
DinI GGCGCC 1 cut(s) 1569
DpnI GATC 8 cut(s) 149, 701, 762, 1247, 1452, 1507, 1628, 2103
DpnII GATC 8 cut(s) 147, 699, 760, 1245, 1450, 1505, 1626, 2101
EaeI YGGCCR 2 cut(s) 576, 1833
Eam1104I CTCTTC 6 cut(s) 855, 1241, 1518, 1578, 1764, 2349
EarI CTCTTC 6 cut(s) 855, 1241, 1518, 1578, 1764, 2349
EciI GGCGGA 1 cut(s) 1132
Ecl136II GAGCTC 3 cut(s) 818, 1027, 2294
Eco130I CCWWGG 3 cut(s) 87, 610, 1379
Eco24I GRGCYC 5 cut(s) 564, 820, 958, 1029, 2296
Eco31I GGTCTC 1 cut(s) 1889
Eco32I GATATC 1 cut(s) 1786
Eco47I GGWCC 7 cut(s) 871, 1279, 1462, 1473, 1607, 1732, 1813
Eco53kI GAGCTC 3 cut(s) 818, 1027, 2294
Eco57I CTGAAG 2 cut(s) 721, 2070
Eco81I CCTNAGG 1 cut(s) 1425
Eco88I CYCGRG 3 cut(s) 122, 1800, 2289
Eco91I GGTNACC 1 cut(s) 1769
EcoICRI GAGCTC 3 cut(s) 818, 1027, 2294
EcoNI CCTNNNNNAGG 1 cut(s) 1496
EcoO109I RGGNCCY 4 cut(s) 561, 1607, 1754, 2147
EcoO65I GGTNACC 1 cut(s) 1769
EcoRI GAATTC 2 cut(s) 509, 568
EcoRII CCWGG 9 cut(s) 504, 563, 960, 1076, 1132, 1267, 1357, 1852, 2162
EcoRV GATATC 1 cut(s) 1786
EcoT14I CCWWGG 3 cut(s) 87, 610, 1379
EcoT22I ATGCAT 1 cut(s) 375
EcoT38I GRGCYC 5 cut(s) 564, 820, 958, 1029, 2296
EgeI GGCGCC 1 cut(s) 1569
EheI GGCGCC 1 cut(s) 1569
ErhI CCWWGG 3 cut(s) 87, 610, 1379
FaeI CATG 7 cut(s) 377, 1144, 1261, 1655, 1663, 2204, 2380
FaqI GGGAC 3 cut(s) 1229, 1855, 2145
FatI CATG 7 cut(s) 373, 1140, 1257, 1651, 1659, 2200, 2376
FauI CCCGC 5 cut(s) 1137, 1462, 1744, 1832, 2270
FauNDI CATATG 1 cut(s) 1225
FblI GTMKAC 2 cut(s) 43, 1167
Fnu4HI GCNGC 7 cut(s) 249, 252, 436, 716, 2001, 2138, 2141
FokI GGATG 6 cut(s) 188, 338, 948, 1584, 1835, 1877
FriOI GRGCYC 5 cut(s) 564, 820, 958, 1029, 2296
Fsp4HI GCNGC 7 cut(s) 249, 252, 436, 716, 2001, 2138, 2141
GlaI GCGC 3 cut(s) 458, 1569, 2266
GluI GCNGC 7 cut(s) 249, 252, 436, 716, 2001, 2138, 2141
GsaI CCCAGC 2 cut(s) 478, 2147
GsuI CTGGAG 2 cut(s) 750, 1295
HaeII RGCGCY 1 cut(s) 1571
HapII CCGG 4 cut(s) 276, 869, 1646, 1836
HhaI GCGC 3 cut(s) 459, 1570, 2267
Hin1I GRCGYC 1 cut(s) 1568
Hin1II CATG 7 cut(s) 377, 1144, 1261, 1655, 1663, 2204, 2380
Hin6I GCGC 3 cut(s) 457, 1568, 2265
HinP1I GCGC 3 cut(s) 457, 1568, 2265
HincII GTYRAC 2 cut(s) 44, 1168
HindII GTYRAC 2 cut(s) 44, 1168
HinfI GANTC 6 cut(s) 773, 1288, 1420, 1640, 1714, 1991
HpaII CCGG 4 cut(s) 276, 869, 1646, 1836
HphI GGTGA 6 cut(s) 77, 181, 758, 1753, 1781, 2104
Hpy166II GTNNAC 3 cut(s) 44, 1168, 1207
Hpy8I GTNNAC 3 cut(s) 44, 1168, 1207
Hpy99I CGWCG 3 cut(s) 1172, 1637, 1640
HpyAV CCTTC 4 cut(s) 295, 1350, 2090, 2198
HpyCH4III ACNGT 4 cut(s) 1211, 1390, 1516, 2230
HpyCH4IV ACGT 2 cut(s) 804, 1354
HpyCH4V TGCA 6 cut(s) 15, 239, 373, 522, 718, 2204
HpyF10VI GCNNNNNNNGC 8 cut(s) 245, 741, 962, 1665, 1685, 1940, 2146, 2300
HpyF3I CTNAG 8 cut(s) 831, 1425, 1458, 1493, 1674, 2004, 2022, 2217
HpySE526I ACGT 2 cut(s) 804, 1354
Hsp92I GRCGYC 1 cut(s) 1568
Hsp92II CATG 7 cut(s) 377, 1144, 1261, 1655, 1663, 2204, 2380
HspAI GCGC 3 cut(s) 457, 1568, 2265
KasI GGCGCC 1 cut(s) 1567
KpnI GGTACC 1 cut(s) 1076
KroI GCCGGC 1 cut(s) 1835
KroNI GCCGGC 1 cut(s) 1837
Kzo9I GATC 8 cut(s) 147, 699, 760, 1245, 1450, 1505, 1626, 2101
LguI GCTCTTC 2 cut(s) 1518, 2349
LmnI GCTCC 4 cut(s) 647, 823, 1648, 2272
Lsp1109I GCAGC 2 cut(s) 447, 702
LweI GCATC 6 cut(s) 2, 166, 439, 855, 1559, 1606
MaeII ACGT 2 cut(s) 804, 1354
MaeIII GTNAC 4 cut(s) 479, 1384, 1769, 2092
MalI GATC 8 cut(s) 149, 701, 762, 1247, 1452, 1507, 1628, 2103
MbiI CCGCTC 1 cut(s) 254
MboI GATC 8 cut(s) 147, 699, 760, 1245, 1450, 1505, 1626, 2101
MflI RGATCY 5 cut(s) 147, 699, 760, 1450, 1505
MhlI GDGCHC 6 cut(s) 564, 668, 820, 958, 1029, 2296
MlsI TGGCCA 1 cut(s) 578
MluI ACGCGT 1 cut(s) 2305
MluNI TGGCCA 1 cut(s) 578
Mly113I GGCGCC 1 cut(s) 1568
MlyI GAGTC 3 cut(s) 1414, 1634, 2000
MmeI TCCRAC 5 cut(s) 570, 1329, 1656, 1978, 2237
Mox20I TGGCCA 1 cut(s) 578
Mph1103I ATGCAT 1 cut(s) 375
MroNI GCCGGC 1 cut(s) 1835
MscI TGGCCA 1 cut(s) 578
MseI TTAA 2 cut(s) 201, 684
MslI CAYNNNNRTG 1 cut(s) 2375
Msp20I TGGCCA 1 cut(s) 578
MspA1I CMGCKG 2 cut(s) 1457, 2137
MspI CCGG 4 cut(s) 276, 869, 1646, 1836
Mva1269I GAATGC 1 cut(s) 500
MvaI CCWGG 9 cut(s) 506, 565, 962, 1078, 1134, 1269, 1359, 1854, 2164
MvnI CGCG 4 cut(s) 744, 1327, 2265, 2307
MwoI GCNNNNNNNGC 8 cut(s) 245, 741, 962, 1665, 1685, 1940, 2146, 2300
NaeI GCCGGC 1 cut(s) 1837
NarI GGCGCC 1 cut(s) 1568
NciI CCSGG 1 cut(s) 1646
NdeI CATATG 1 cut(s) 1225
NdeII GATC 8 cut(s) 147, 699, 760, 1245, 1450, 1505, 1626, 2101
NgoMIV GCCGGC 1 cut(s) 1835
NheI GCTAGC 1 cut(s) 1049
NlaIII CATG 7 cut(s) 377, 1144, 1261, 1655, 1663, 2204, 2380
NmuCI GTSAC 3 cut(s) 479, 1769, 2092
NsiI ATGCAT 1 cut(s) 375
NspI RCATGY 1 cut(s) 2204
NspV TTCGAA 1 cut(s) 2119
PaeI GCATGC 1 cut(s) 2204
PaeR7I CTCGAG 2 cut(s) 1800, 2289
PciSI GCTCTTC 2 cut(s) 1518, 2349
PcsI WCGNNNNNNNCGW 3 cut(s) 1164, 1351, 2311
PctI GAATGC 1 cut(s) 500
PdiI GCCGGC 1 cut(s) 1837
PfeI GAWTC 3 cut(s) 773, 1288, 1714
PflFI GACNNNGTC 1 cut(s) 1163
PflMI CCANNNNNTGG 3 cut(s) 936, 1060, 2169
PfoI TCCNGGA 1 cut(s) 504
PkrI GCNGC 7 cut(s) 250, 253, 437, 717, 2002, 2139, 2142
PleI GAGTC 3 cut(s) 1414, 1634, 1999
PluTI GGCGCC 1 cut(s) 1571
PpsI GAGTC 3 cut(s) 1414, 1634, 1999
PpuMI RGGWCCY 1 cut(s) 1607
PshBI ATTAAT 2 cut(s) 201, 684
PsiI TTATAA 1 cut(s) 651
Psp124BI GAGCTC 3 cut(s) 820, 1029, 2296
Psp5II RGGWCCY 1 cut(s) 1607
Psp6I CCWGG 9 cut(s) 504, 563, 960, 1076, 1132, 1267, 1357, 1852, 2162
PspEI GGTNACC 1 cut(s) 1769
PspFI CCCAGC 2 cut(s) 474, 2143
PspGI CCWGG 9 cut(s) 504, 563, 960, 1076, 1132, 1267, 1357, 1852, 2162
PspOMI GGGCCC 1 cut(s) 560
PspPPI RGGWCCY 1 cut(s) 1607
PspXI VCTCGAGB 1 cut(s) 2289
PstI CTGCAG 1 cut(s) 720
PsuI RGATCY 5 cut(s) 147, 699, 760, 1450, 1505
PsyI GACNNNGTC 1 cut(s) 1163
RsaI GTAC 4 cut(s) 851, 1074, 1151, 2313
RsaNI GTAC 4 cut(s) 850, 1073, 1150, 2312
RseI CAYNNNNRTG 1 cut(s) 2375
SacI GAGCTC 3 cut(s) 820, 1029, 2296
SalI GTCGAC 2 cut(s) 42, 1166
SapI GCTCTTC 2 cut(s) 1518, 2349
SaqAI TTAA 2 cut(s) 201, 684
SatI GCNGC 7 cut(s) 249, 252, 436, 716, 2001, 2138, 2141
Sau3AI GATC 8 cut(s) 147, 699, 760, 1245, 1450, 1505, 1626, 2101
SchI GAGTC 3 cut(s) 1414, 1634, 2000
SduI GDGCHC 6 cut(s) 564, 668, 820, 958, 1029, 2296
SfaNI GCATC 6 cut(s) 2, 166, 439, 855, 1559, 1606
SfcI CTRYAG 5 cut(s) 716, 1311, 1590, 2229, 2277
SfoI GGCGCC 1 cut(s) 1569
Sfr274I CTCGAG 2 cut(s) 1800, 2289
SfuI TTCGAA 1 cut(s) 2119
SinI GGWCC 7 cut(s) 871, 1279, 1462, 1473, 1607, 1732, 1813
SlaI CTCGAG 2 cut(s) 1800, 2289
SmiMI CAYNNNNRTG 1 cut(s) 2375
SmlI CTYRAG 3 cut(s) 1292, 1800, 2289
SmoI CTYRAG 3 cut(s) 1292, 1800, 2289
SphI GCATGC 1 cut(s) 2204
SspDI GGCGCC 1 cut(s) 1567
SstI GAGCTC 3 cut(s) 820, 1029, 2296
StyI CCWWGG 3 cut(s) 87, 610, 1379
TaaI ACNGT 4 cut(s) 1211, 1390, 1516, 2230
TaiI ACGT 2 cut(s) 807, 1357
TatI WGTACW 1 cut(s) 849
TauI GCSGC 5 cut(s) 251, 254, 2003, 2140, 2143
TfiI GAWTC 3 cut(s) 773, 1288, 1714
Tru1I TTAA 2 cut(s) 201, 684
Tru9I TTAA 2 cut(s) 201, 684
TscAI CASTG 3 cut(s) 586, 937, 2233
TseFI GTSAC 3 cut(s) 479, 1769, 2092
TseI GCWGC 2 cut(s) 435, 715
Tsp45I GTSAC 3 cut(s) 479, 1769, 2092
TspDTI ATGAA 4 cut(s) 1461, 1668, 1761, 1983
TspGWI ACGGA 1 cut(s) 1192
TspRI CASTG 3 cut(s) 586, 937, 2233
Tth111I GACNNNGTC 1 cut(s) 1163
Van91I CCANNNNNTGG 3 cut(s) 936, 1060, 2169
VpaK11BI GGWCC 7 cut(s) 871, 1279, 1462, 1473, 1607, 1732, 1813
VspI ATTAAT 2 cut(s) 201, 684
XagI CCTNNNNNAGG 1 cut(s) 1496
XapI RAATTY 4 cut(s) 509, 524, 568, 1982
XceI RCATGY 1 cut(s) 2204
XcmI CCANNNNNNNNNTGG 1 cut(s) 985
XhoI CTCGAG 2 cut(s) 1800, 2289
XmaJI CCTAGG 1 cut(s) 1379
XmiI GTMKAC 2 cut(s) 43, 1167
Zsp2I ATGCAT 1 cut(s) 375
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.