Rmu_sc0000368.1_g000014

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000368.1
OG0000214
Physical Location & Seq
Reverse (-)
56344 .. 59494
3151 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000368.1_g000014.1.cds

Sequence Viewer

Length: 2163 bp
atggcatcaaagaaaccattcgttatcgatcaagcagatgaaatcattgagaaagccgcattcaactggcggactaacatgagtattcaatgtagacgtcataccggagaggagagaagccgactgatgggctttggtgacggtgatagtcaagcgagtctgggtcccacacctcgcgatcgtttgccagattatgctatggcctattatgggcttcccatccgccatcccatagcggctcttcggcaggtgcctggtgattttagcagttggggaccaaggaggaaagtgggcttctggcctaccgtcattcccgagagatttggcccgatgggatgcggtggcaatacattcgatttccggtttgggcagatgagcataactctgctggattttcttaccatcacggggttgcccattgactttgacctctatgtgcatggtcagtttgatggcattcaattttctttgagaatggatatggctggtcgagggcatcacagcaaatcctacccattctggcacgactattactacacccagcgtgacatacaggtgatttatttcactctattccgtcgcggcgatattccaaaggaacctccaattgattcccttttggggaactggctttgccgcaacgtaaggtatcgagctccaccctactccgagtgttttatttacttgtacttgctgggagagatgccagacccaaaaatagtcctttctaggcgattccctcctccccttgatgatggctttctgcccaatggacgggatcatagtgaaagagccctcctggcctttcgtggctccatctcctgcttggatattcgtattgccactgatcgcgtaagttacgagctctacgcccctaaccactttgctcgccaatttgcgttggcccagttggtaccctggcctctggttgattctgccaattattacacctcttggcagagattagccccacctgggtctaccccctttcagagtcagtttactttgatagtgattcccccttgggtcagagcgttgtaccccctcaacgatatcgatgatgattatgttgattggtggaaagaagtgtccgtgaactgttgggacctaccacaggacgaactcttcatcttgatctttcgtggcataagtagtcctggtccgaaggaccgcgagattcttgagcgcttctccaaccctgcagcacaaaccccacgacctattcttccttctcgcttatcgcgtccaaggatacaaatccacgagcctagggcaacaataagatttttagaggagactcttgatggagagtcttctcatgatgaagatcctgctgaggccattgctgtctttgcttgcaaacgcgataggtctcaatccgtcgaagagagttttgaacatgacgaacctctgggaatgcgattggtaaactctgagcatctgcaaggtcctaccattctaataacgatctccgatgacgactcctcggagcatgaaagcgtggaaagccactctgaggcttctgccacttatgtagaactgatgacgacagagattgtagcggcactagaggtccaagagctcaacaaggtgaggcctcttcctcttggtgaccacgtaccagatattgaccggacagctcgaaaggattctgtttgtaccgaggaggtggcaacatacactgaaggtcctatcggcgggacagtcgccctagagatggaaaatgatactgacggtggtggttccccccaagtctcgcgaataaatgagacaaccgtcgaagccgagggccctgtgcttgaatcagctccacttactcatggtgagccgcgagttgaatttccagattctcctgcagctgaagggatagaccaacctattgaagatgaagaaaccgaggaagctgtccagccttttgcattagtggagaaggttttgactctgtggcaatttagtgctatcgactctctgttgaatgaacttgatatggcccgccgacgtcaatctgccgcaaacacccaggctcgcgacgctcaagaggctttgaatagtgtctctcgagaaatggacatctctcgcgatattttaaatgaacgatctatccgcctgcgggaactacaaatccaaaggtccgacttcaaacttcagatcgaggacctctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

720

Amino Acids

81.76

Weight (kDa)

4.8

Isoelectric Point (pI)

53.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000214)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0079611
rosa_multiflora Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha Rh3DG208400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 238
AatII GACGTC 2 cut(s) 100, 2002
Acc36I ACCTGC 1 cut(s) 238
Acc65I GGTACC 1 cut(s) 913
AccB1I GGYRCC 2 cut(s) 250, 913
AccI GTMKAC 2 cut(s) 94, 980
AclWI GGATC 2 cut(s) 786, 1322
AcsI RAATTY 1 cut(s) 1838
AcuI CTGAAG 3 cut(s) 1704, 1881, 2129
AcyI GRCGYC 2 cut(s) 97, 1999
AfaI GTAC 5 cut(s) 689, 915, 1040, 1620, 1660
AfeI AGCGCT 1 cut(s) 1187
AjnI CCWGG 6 cut(s) 253, 798, 917, 973, 1156, 2019
AloI GAACNNNNNNTCC 4 cut(s) 2085, 2106, 2117, 2138
AluBI AGCT 7 cut(s) 656, 865, 1582, 1640, 1808, 1859, 1904
AluI AGCT 7 cut(s) 656, 865, 1582, 1640, 1808, 1859, 1904
Alw21I GWGCWC 3 cut(s) 658, 867, 1584
Alw26I GTCTC 5 cut(s) 1289, 1377, 1759, 1763, 2059
AlwI GGATC 2 cut(s) 786, 1322
Ama87I CYCGRG 2 cut(s) 314, 2058
Aor51HI AGCGCT 1 cut(s) 1187
ApaI GGGCCC 1 cut(s) 1793
ApeKI GCWGC 2 cut(s) 1202, 1856
ApoI RAATTY 1 cut(s) 1838
Asp700I GAANNNNTTC 2 cut(s) 17, 1648
Asp718I GGTACC 1 cut(s) 913
AspA2I CCTAGG 1 cut(s) 1268
AspLEI GCGC 1 cut(s) 1188
AsuHPI GGTGA 7 cut(s) 149, 155, 269, 568, 1603, 1622, 1835
AvaI CYCGRG 2 cut(s) 314, 2058
AvrII CCTAGG 1 cut(s) 1268
BaeGI GKGCMC 1 cut(s) 1793
BanI GGYRCC 2 cut(s) 250, 913
BanII GRGCYC 5 cut(s) 658, 796, 867, 1584, 1793
BauI CACGAG 1 cut(s) 1262
BbsI GAAGAC 1 cut(s) 1305
Bbv12I GWGCWC 3 cut(s) 658, 867, 1584
BbvCI CCTCAGC 1 cut(s) 1335
BbvI GCAGC 2 cut(s) 1214, 1868
BcgI CGANNNNNNTGC 2 cut(s) 334, 368
BciT130I CCWGG 6 cut(s) 255, 800, 919, 975, 1158, 2021
BciVI GTATCC 1 cut(s) 1245
BcoDI GTCTC 5 cut(s) 1289, 1377, 1759, 1763, 2059
BfaI CTAG 4 cut(s) 729, 1269, 1568, 1712
BfmI CTRYAG 2 cut(s) 1200, 1854
BfoI RGCGCY 1 cut(s) 1189
BfuAI ACCTGC 1 cut(s) 238
BfuI GTATCC 1 cut(s) 1245
BglI GCCNNNNNGGC 1 cut(s) 800
BisI GCNGC 9 cut(s) 57, 237, 583, 637, 1203, 1563, 1829, 1857, 2010
BlnI CCTAGG 1 cut(s) 1268
BlsI GCNGC 9 cut(s) 58, 238, 584, 638, 1204, 1564, 1830, 1858, 2011
Bme1390I CCNGG 6 cut(s) 255, 800, 919, 975, 1158, 2021
BmeT110I CYCGRG 2 cut(s) 314, 2058
BmrFI CCNGG 6 cut(s) 255, 800, 919, 975, 1158, 2021
BmrI ACTGGG 1 cut(s) 901
BmsI GCATC 5 cut(s) 14, 326, 505, 693, 1447
BmuI ACTGGG 1 cut(s) 901
BoxI GACNNNNGTC 1 cut(s) 1775
BpiI GAAGAC 1 cut(s) 1305
BplI GAGNNNNNCTC 4 cut(s) 367, 399, 1175, 1207
Bpu10I CCTNAGC 1 cut(s) 1335
BpuEI CTTGAG 2 cut(s) 1202, 2019
Bsa29I ATCGAT 2 cut(s) 27, 1056
BsaAI YACGTR 1 cut(s) 1618
BsaBI GATNNNNATC 2 cut(s) 1256, 1326
BsaHI GRCGYC 2 cut(s) 97, 1999
BsaI GGTCTC 1 cut(s) 1377
BsaWI WCCGGW 3 cut(s) 104, 360, 1632
Bse1I ACTGG 3 cut(s) 71, 632, 907
Bse3DI GCAATG 1 cut(s) 1341
Bse8I GATNNNNATC 2 cut(s) 1256, 1326
BseBI CCWGG 6 cut(s) 255, 800, 919, 975, 1158, 2021
BseCI ATCGAT 2 cut(s) 27, 1056
BseGI GGATG 3 cut(s) 219, 226, 341
BseJI GATNNNNATC 2 cut(s) 1256, 1326
BseMI GCAATG 1 cut(s) 1341
BseMII CTCAG 3 cut(s) 1326, 1425, 1506
BseNI ACTGG 3 cut(s) 71, 632, 907
BseRI GAGGAG 5 cut(s) 125, 732, 1307, 1474, 1679
BseSI GKGCMC 1 cut(s) 1793
BseXI GCAGC 2 cut(s) 1214, 1868
BseYI CCCAGC 2 cut(s) 540, 694
Bsh1285I CGRYCG 1 cut(s) 181
BshNI GGYRCC 2 cut(s) 250, 913
BshVI ATCGAT 2 cut(s) 27, 1056
BsiEI CGRYCG 1 cut(s) 181
BsiHKAI GWGCWC 3 cut(s) 658, 867, 1584
BsiHKCI CYCGRG 2 cut(s) 314, 2058
BsiSI CCGG 3 cut(s) 105, 361, 1633
BslFI GGGAC 4 cut(s) 150, 288, 1118, 1714
BsmAI GTCTC 5 cut(s) 1289, 1377, 1759, 1763, 2059
BsmFI GGGAC 4 cut(s) 150, 288, 1118, 1714
BsmI GAATGC 3 cut(s) 59, 456, 1422
Bso31I GGTCTC 1 cut(s) 1377
BsoBI CYCGRG 2 cut(s) 314, 2058
Bsp120I GGGCCC 1 cut(s) 1789
Bsp1286I GDGCHC 5 cut(s) 658, 796, 867, 1584, 1793
Bsp143I GATC 9 cut(s) 28, 178, 778, 847, 1134, 1327, 1467, 2096, 2148
Bsp68I TCGCGA 4 cut(s) 177, 1759, 2028, 2079
BspCNI CTCAG 3 cut(s) 1327, 1426, 1507
BspDI ATCGAT 2 cut(s) 27, 1056
BspHI TCATGA 1 cut(s) 1318
BspMAI CTGCAG 2 cut(s) 1204, 1858
BspMI ACCTGC 1 cut(s) 238
BspPI GGATC 2 cut(s) 786, 1322
BspQI GCTCTTC 1 cut(s) 246
BspT107I GGYRCC 2 cut(s) 250, 913
BspTNI GGTCTC 1 cut(s) 1377
BsrDI GCAATG 1 cut(s) 1341
BsrI ACTGG 3 cut(s) 71, 632, 907
BssMI GATC 9 cut(s) 28, 178, 778, 847, 1134, 1327, 1467, 2096, 2148
BssNI GRCGYC 2 cut(s) 97, 1999
BssSI CACGAG 1 cut(s) 1262
BssT1I CCWWGG 4 cut(s) 278, 1022, 1247, 1268
Bst2BI CACGAG 1 cut(s) 1262
Bst2UI CCWGG 6 cut(s) 255, 800, 919, 975, 1158, 2021
Bst4CI ACNGT 6 cut(s) 143, 307, 1100, 1705, 1736, 1777
Bst6I CTCTTC 4 cut(s) 246, 1130, 1380, 1605
BstACI GRCGYC 2 cut(s) 97, 1999
BstBAI YACGTR 1 cut(s) 1618
BstC8I GCNNGC 5 cut(s) 889, 1357, 1993, 2026, 2108
BstDEI CTNAG 3 cut(s) 1335, 1434, 1515
BstEII GGTNACC 1 cut(s) 1610
BstENI CCTNNNNNAGG 1 cut(s) 1112
BstF5I GGATG 3 cut(s) 219, 226, 341
BstH2I RGCGCY 1 cut(s) 1189
BstHHI GCGC 1 cut(s) 1188
BstKTI GATC 9 cut(s) 31, 181, 781, 850, 1137, 1330, 1470, 2099, 2151
BstMAI GTCTC 5 cut(s) 1289, 1377, 1759, 1763, 2059
BstMBI GATC 9 cut(s) 28, 178, 778, 847, 1134, 1327, 1467, 2096, 2148
BstMCI CGRYCG 1 cut(s) 181
BstMWI GCNNNNNNNGC 5 cut(s) 800, 1352, 1506, 2030, 2039
BstNI CCWGG 6 cut(s) 255, 800, 919, 975, 1158, 2021
BstPAI GACNNNNGTC 1 cut(s) 1775
BstPI GGTNACC 1 cut(s) 1610
BstSCI CCNGG 6 cut(s) 253, 798, 917, 973, 1156, 2019
BstSFI CTRYAG 2 cut(s) 1200, 1854
BstSLI GKGCMC 1 cut(s) 1793
BstV1I GCAGC 2 cut(s) 1214, 1868
BstV2I GAAGAC 1 cut(s) 1305
BstX2I RGATCY 1 cut(s) 1327
BstYI RGATCY 1 cut(s) 1327
Bsu15I ATCGAT 2 cut(s) 27, 1056
BsuI GTATCC 1 cut(s) 1245
BsuTUI ATCGAT 2 cut(s) 27, 1056
BtsCI GGATG 3 cut(s) 219, 226, 341
BtsIMutI CAGTG 2 cut(s) 843, 1680
BtuMI TCGCGA 4 cut(s) 177, 1759, 2028, 2079
BveI ACCTGC 1 cut(s) 238
Cac8I GCNNGC 5 cut(s) 889, 1357, 1993, 2026, 2108
CciI TCATGA 1 cut(s) 1318
CfoI GCGC 1 cut(s) 1188
ClaI ATCGAT 2 cut(s) 27, 1056
CseI GACGC 2 cut(s) 1232, 2039
Csp6I GTAC 5 cut(s) 688, 914, 1039, 1619, 1659
CviAII CATG 6 cut(s) 79, 440, 1319, 1400, 1493, 1820
CviQI GTAC 5 cut(s) 688, 914, 1039, 1619, 1659
DdeI CTNAG 3 cut(s) 1335, 1434, 1515
DpnI GATC 9 cut(s) 30, 180, 780, 849, 1136, 1329, 1469, 2098, 2150
DpnII GATC 9 cut(s) 28, 178, 778, 847, 1134, 1327, 1467, 2096, 2148
DraI TTTAAA 1 cut(s) 2088
Eam1104I CTCTTC 4 cut(s) 246, 1130, 1380, 1605
EarI CTCTTC 4 cut(s) 246, 1130, 1380, 1605
EciI GGCGGA 3 cut(s) 85, 212, 2093
Ecl136II GAGCTC 3 cut(s) 656, 865, 1582
Eco130I CCWWGG 4 cut(s) 278, 1022, 1247, 1268
Eco147I AGGCCT 1 cut(s) 1597
Eco24I GRGCYC 5 cut(s) 658, 796, 867, 1584, 1793
Eco31I GGTCTC 1 cut(s) 1377
Eco32I GATATC 1 cut(s) 1054
Eco47III AGCGCT 1 cut(s) 1187
Eco53kI GAGCTC 3 cut(s) 656, 865, 1582
Eco57I CTGAAG 3 cut(s) 1704, 1881, 2129
Eco88I CYCGRG 2 cut(s) 314, 2058
Eco91I GGTNACC 1 cut(s) 1610
EcoICRI GAGCTC 3 cut(s) 656, 865, 1582
EcoNI CCTNNNNNAGG 1 cut(s) 1112
EcoO109I RGGNCCY 7 cut(s) 164, 1105, 1448, 1688, 1789, 1790, 2155
EcoO65I GGTNACC 1 cut(s) 1610
EcoRII CCWGG 6 cut(s) 253, 798, 917, 973, 1156, 2019
EcoRV GATATC 1 cut(s) 1054
EcoT14I CCWWGG 4 cut(s) 278, 1022, 1247, 1268
EcoT38I GRGCYC 5 cut(s) 658, 796, 867, 1584, 1793
ErhI CCWWGG 4 cut(s) 278, 1022, 1247, 1268
FaeI CATG 6 cut(s) 82, 443, 1322, 1403, 1496, 1823
FaqI GGGAC 4 cut(s) 150, 288, 1118, 1714
FatI CATG 6 cut(s) 78, 439, 1318, 1399, 1492, 1819
FauI CCCGC 3 cut(s) 1691, 2000, 2103
FblI GTMKAC 2 cut(s) 94, 980
Fnu4HI GCNGC 9 cut(s) 57, 237, 583, 637, 1203, 1563, 1829, 1857, 2010
FokI GGATG 3 cut(s) 206, 213, 348
FriOI GRGCYC 5 cut(s) 658, 796, 867, 1584, 1793
Fsp4HI GCNGC 9 cut(s) 57, 237, 583, 637, 1203, 1563, 1829, 1857, 2010
FspBI CTAG 4 cut(s) 729, 1269, 1568, 1712
GlaI GCGC 1 cut(s) 1187
GluI GCNGC 9 cut(s) 57, 237, 583, 637, 1203, 1563, 1829, 1857, 2010
GsaI CCCAGC 2 cut(s) 544, 698
HaeII RGCGCY 1 cut(s) 1189
HapII CCGG 3 cut(s) 105, 361, 1633
HgaI GACGC 2 cut(s) 1232, 2039
HhaI GCGC 1 cut(s) 1188
Hin1I GRCGYC 2 cut(s) 97, 1999
Hin1II CATG 6 cut(s) 82, 443, 1322, 1403, 1496, 1823
Hin6I GCGC 1 cut(s) 1186
HinP1I GCGC 1 cut(s) 1186
HpaII CCGG 3 cut(s) 105, 361, 1633
HphI GGTGA 7 cut(s) 149, 155, 269, 568, 1603, 1622, 1835
Hpy166II GTNNAC 5 cut(s) 95, 981, 1002, 1096, 1429
Hpy8I GTNNAC 5 cut(s) 95, 981, 1002, 1096, 1429
Hpy99I CGWCG 5 cut(s) 582, 1385, 1781, 2001, 2033
HpyAV CCTTC 5 cut(s) 1159, 1239, 1679, 1856, 1924
HpyCH4III ACNGT 6 cut(s) 143, 307, 1100, 1705, 1736, 1777
HpyCH4IV ACGT 4 cut(s) 97, 642, 1617, 1999
HpyCH4V TGCA 6 cut(s) 439, 1202, 1359, 1444, 1856, 1919
HpyF10VI GCNNNNNNNGC 5 cut(s) 800, 1352, 1506, 2030, 2039
HpyF3I CTNAG 3 cut(s) 1335, 1434, 1515
HpySE526I ACGT 4 cut(s) 97, 642, 1617, 1999
Hsp92I GRCGYC 2 cut(s) 97, 1999
Hsp92II CATG 6 cut(s) 82, 443, 1322, 1403, 1496, 1823
HspAI GCGC 1 cut(s) 1186
KflI GGGWCCC 1 cut(s) 164
KpnI GGTACC 1 cut(s) 917
Kzo9I GATC 9 cut(s) 28, 178, 778, 847, 1134, 1327, 1467, 2096, 2148
LguI GCTCTTC 1 cut(s) 246
LmnI GCTCC 4 cut(s) 661, 818, 1489, 1813
Lsp1109I GCAGC 2 cut(s) 1214, 1868
LweI GCATC 5 cut(s) 14, 326, 505, 693, 1447
MaeI CTAG 4 cut(s) 729, 1269, 1568, 1712
MaeII ACGT 4 cut(s) 97, 642, 1617, 1999
MaeIII GTNAC 4 cut(s) 137, 545, 857, 1610
MalI GATC 9 cut(s) 30, 180, 780, 849, 1136, 1329, 1469, 2098, 2150
MboI GATC 9 cut(s) 28, 178, 778, 847, 1134, 1327, 1467, 2096, 2148
MboII GAAGA 9 cut(s) 233, 1117, 1217, 1305, 1337, 1397, 1592, 1895, 1901
MfeI CAATTG 1 cut(s) 606
MflI RGATCY 1 cut(s) 1327
MhlI GDGCHC 5 cut(s) 658, 796, 867, 1584, 1793
MluCI AATT 6 cut(s) 461, 606, 893, 940, 1838, 1949
MlyI GAGTC 7 cut(s) 166, 1003, 1291, 1319, 1475, 1933, 1958
MmeI TCCRAC 2 cut(s) 1218, 2157
MroXI GAANNNNTTC 2 cut(s) 17, 1648
MseI TTAA 1 cut(s) 2087
MslI CAYNNNNRTG 1 cut(s) 554
MspA1I CMGCKG 1 cut(s) 1859
MspI CCGG 3 cut(s) 105, 361, 1633
MspR9I CCNGG 6 cut(s) 255, 800, 919, 975, 1158, 2021
MunI CAATTG 1 cut(s) 606
Mva1269I GAATGC 3 cut(s) 59, 456, 1422
MvaI CCWGG 6 cut(s) 255, 800, 919, 975, 1158, 2021
MwoI GCNNNNNNNGC 5 cut(s) 800, 1352, 1506, 2030, 2039
NdeII GATC 9 cut(s) 28, 178, 778, 847, 1134, 1327, 1467, 2096, 2148
NlaIII CATG 6 cut(s) 82, 443, 1322, 1403, 1496, 1823
NmeAIII GCCGAG 1 cut(s) 1810
NmuCI GTSAC 3 cut(s) 137, 545, 1610
NruI TCGCGA 4 cut(s) 177, 1759, 2028, 2079
PaeR7I CTCGAG 1 cut(s) 2058
PagI TCATGA 1 cut(s) 1318
PaqCI CACCTGC 1 cut(s) 238
PceI AGGCCT 1 cut(s) 1597
PciSI GCTCTTC 1 cut(s) 246
PcsI WCGNNNNNNNCGW 1 cut(s) 1240
PctI GAATGC 3 cut(s) 59, 456, 1422
PdmI GAANNNNTTC 2 cut(s) 17, 1648
PfeI GAWTC 8 cut(s) 611, 735, 932, 1015, 1177, 1649, 1802, 1847
PkrI GCNGC 9 cut(s) 58, 238, 584, 638, 1204, 1564, 1830, 1858, 2011
Ple19I CGATCG 1 cut(s) 181
PleI GAGTC 7 cut(s) 165, 1002, 1291, 1318, 1475, 1933, 1958
PpsI GAGTC 7 cut(s) 165, 1002, 1291, 1318, 1475, 1933, 1958
Ppu21I YACGTR 1 cut(s) 1618
PpuMI RGGWCCY 5 cut(s) 164, 1105, 1448, 1688, 2155
PshAI GACNNNNGTC 1 cut(s) 1775
Psp124BI GAGCTC 3 cut(s) 658, 867, 1584
Psp5II RGGWCCY 5 cut(s) 164, 1105, 1448, 1688, 2155
Psp6I CCWGG 6 cut(s) 253, 798, 917, 973, 1156, 2019
PspEI GGTNACC 1 cut(s) 1610
PspFI CCCAGC 2 cut(s) 540, 694
PspGI CCWGG 6 cut(s) 253, 798, 917, 973, 1156, 2019
PspOMI GGGCCC 1 cut(s) 1789
PspPPI RGGWCCY 5 cut(s) 164, 1105, 1448, 1688, 2155
PstI CTGCAG 2 cut(s) 1204, 1858
PsuI RGATCY 1 cut(s) 1327
PvuI CGATCG 1 cut(s) 181
PvuII CAGCTG 1 cut(s) 1859
RruI TCGCGA 4 cut(s) 177, 1759, 2028, 2079
RsaI GTAC 5 cut(s) 689, 915, 1040, 1620, 1660
RsaNI GTAC 5 cut(s) 688, 914, 1039, 1619, 1659
RseI CAYNNNNRTG 1 cut(s) 554
SacI GAGCTC 3 cut(s) 658, 867, 1584
SapI GCTCTTC 1 cut(s) 246
SaqAI TTAA 1 cut(s) 2087
SatI GCNGC 9 cut(s) 57, 237, 583, 637, 1203, 1563, 1829, 1857, 2010
Sau3AI GATC 9 cut(s) 28, 178, 778, 847, 1134, 1327, 1467, 2096, 2148
SchI GAGTC 7 cut(s) 166, 1003, 1291, 1319, 1475, 1933, 1958
ScrFI CCNGG 6 cut(s) 255, 800, 919, 975, 1158, 2021
SduI GDGCHC 5 cut(s) 658, 796, 867, 1584, 1793
SfaNI GCATC 5 cut(s) 14, 326, 505, 693, 1447
SfcI CTRYAG 2 cut(s) 1200, 1854
Sfr274I CTCGAG 1 cut(s) 2058
SlaI CTCGAG 1 cut(s) 2058
SmiMI CAYNNNNRTG 1 cut(s) 554
SmlI CTYRAG 3 cut(s) 1181, 2034, 2058
SmoI CTYRAG 3 cut(s) 1181, 2034, 2058
Sse9I AATT 6 cut(s) 461, 606, 893, 940, 1838, 1949
SseBI AGGCCT 1 cut(s) 1597
SspMI CTAG 4 cut(s) 729, 1269, 1568, 1712
SstI GAGCTC 3 cut(s) 658, 867, 1584
StuI AGGCCT 1 cut(s) 1597
StyD4I CCNGG 6 cut(s) 253, 798, 917, 973, 1156, 2019
StyI CCWWGG 4 cut(s) 278, 1022, 1247, 1268
TaaI ACNGT 6 cut(s) 143, 307, 1100, 1705, 1736, 1777
TaiI ACGT 4 cut(s) 100, 645, 1620, 2002
TasI AATT 6 cut(s) 461, 606, 893, 940, 1838, 1949
TatI WGTACW 1 cut(s) 687
TauI GCSGC 7 cut(s) 59, 239, 585, 639, 1565, 1831, 2012
TfiI GAWTC 8 cut(s) 611, 735, 932, 1015, 1177, 1649, 1802, 1847
Tru1I TTAA 1 cut(s) 2087
Tru9I TTAA 1 cut(s) 2087
TscAI CASTG 2 cut(s) 850, 1687
TseFI GTSAC 3 cut(s) 137, 545, 1610
TseI GCWGC 2 cut(s) 1202, 1856
Tsp45I GTSAC 3 cut(s) 137, 545, 1610
TspDTI ATGAA 7 cut(s) 54, 1117, 1338, 1509, 1902, 1992, 2106
TspGWI ACGGA 3 cut(s) 566, 1081, 1369
TspRI CASTG 2 cut(s) 850, 1687
XagI CCTNNNNNAGG 1 cut(s) 1112
XapI RAATTY 1 cut(s) 1838
XcmI CCANNNNNNNNNTGG 1 cut(s) 823
XhoI CTCGAG 1 cut(s) 2058
XmaJI CCTAGG 1 cut(s) 1268
XmiI GTMKAC 2 cut(s) 94, 980
XmnI GAANNNNTTC 2 cut(s) 17, 1648
XspI CTAG 4 cut(s) 729, 1269, 1568, 1712
ZraI GACGTC 2 cut(s) 98, 2000
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.