Rmu_sc0005608.1_g000003

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005608.1
OG0000214
Physical Location & Seq
Forward (+)
13368 .. 15529
2162 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005608.1_g000003.1.cds

Sequence Viewer

Length: 1476 bp
atggatatggctggtcgggggcatcacagcaaatcctacccattctggcgcgactattactgcacccagcatgaccacacaagaggtatcgcattcctggaattctggctttgcaaatttatcttttgcacttcttccaacaaacctactgggccctggaattctctggctactgctttctacaatggtatttgcgttggccttgggcaacctatattgggtgcgttatattgctccttttataaagccgtaatgcgccccttcgataccgacattagtggccctttttggatcctcgccttttggctgcagatttatttccctcgcttccgttgcggtgatattccaaaggatcctccaatcgattcccttttggggaattggttttgtcgcaacgtaaggtatccagccctaccctactccaagtgttttatttacttgtacttgttggaagagatgccggaccaaaaaattgtcctttctaggccattccctcctccccttgatgatggctttctgcccagtggatgggatcatagcgaaatagccctcctggcctttcgtcgcgccatctcctgcttggatattcgtcttgccaccgaccgcgtaagctatgagctctatgcccctaaccacttcgctcgccaatttggattggtccagttgagaactacctggagcaggacaacctctattcaggccgagaaacaaaacgcaatagcaaaggagactcctgagggagagtcttctcatgatgaggatcccgctgaggccactactgtcttcgctcacaagcctgatcgagctcaatttgtcgaagagagttttgaagatgacgaacctctgggaatgcgattggtccgtcataggaccactgatctctctcgcctgagcgaggctagatcctcagccgcttcagaagagccaactctttcgctagttcaagcatcaactagcctcgtggcgcctcttccctctcccacatctacaaagcatccgcaaggtcctaccattctaataacgttctccgatgatgactccccggagcatgaaagcgtggaaagccactctgaggcttctgccgcttatgaggaactaatgacgacagagattcccgtggtactagaggtccaagaggtgaatgaagcggggccccttcctcttggtgaccatgtactagatatcgacccgacaactcgagaggattctgtttgtaccgaggaggtggtctttgatgccgaagatctggccggcgagacgtacatcccaggtttgggggatgaggcgagcagtggtggtctcttgatttcggaaatagacgaggcgagcgttgaggccgaaggttatgctcgtctccaacactctactgatgaacctcgcattaaatttccagaatctccggcagctgagatgtcggaccaagctcaggggtcgttgagggaaattatgctaaagatgaaagaattgaggaactaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

491

Amino Acids

55.07

Weight (kDa)

4.7

Isoelectric Point (pI)

52.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000214)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0079611
rosa_multiflora Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha Rh3DG208400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 243
AccB1I GGYRCC 1 cut(s) 964
AccB7I CCANNNNNTGG 1 cut(s) 528
AccII CGCG 3 cut(s) 51, 567, 606
AciI CCGC 7 cut(s) 336, 604, 765, 912, 998, 1083, 1148
AclI AACGTT 1 cut(s) 1022
AclWI GGATC 8 cut(s) 286, 299, 347, 360, 540, 755, 768, 897
AcoI YGGCCR 1 cut(s) 1248
AcsI RAATTY 4 cut(s) 101, 116, 160, 1385
AcuI CTGAAG 1 cut(s) 900
AcyI GRCGYC 1 cut(s) 965
AfaI GTAC 5 cut(s) 443, 1122, 1176, 1216, 1262
AfiI CCNNNNNNNGG 9 cut(s) 218, 375, 528, 681, 895, 1072, 1273, 1274, 1426
AgsI TTSAA 2 cut(s) 830, 944
AjnI CCWGG 5 cut(s) 96, 155, 552, 674, 1267
AluBI AGCT 5 cut(s) 612, 619, 806, 1406, 1424
AluI AGCT 5 cut(s) 612, 619, 806, 1406, 1424
Alw21I GWGCWC 2 cut(s) 621, 808
Alw26I GTCTC 4 cut(s) 722, 1250, 1304, 1358
AlwI GGATC 8 cut(s) 286, 299, 347, 360, 540, 755, 768, 897
Ama87I CYCGRG 1 cut(s) 1197
ApaI GGGCCC 2 cut(s) 156, 1155
ApeKI GCWGC 2 cut(s) 307, 1403
ApoI RAATTY 4 cut(s) 101, 116, 160, 1385
AspLEI GCGC 4 cut(s) 51, 258, 569, 967
AsuC2I CCSGG 1 cut(s) 1043
AsuHPI GGTGA 3 cut(s) 350, 1150, 1178
AvaI CYCGRG 1 cut(s) 1197
AvaII GGWCC 7 cut(s) 463, 658, 859, 870, 1004, 1129, 1417
AxyI CCTNAGG 1 cut(s) 735
BaeGI GKGCMC 2 cut(s) 156, 1155
BamHI GGATCC 3 cut(s) 291, 352, 760
BanI GGYRCC 1 cut(s) 964
BanII GRGCYC 4 cut(s) 156, 621, 808, 1155
BauI CACGAG 1 cut(s) 959
BbsI GAAGAC 2 cut(s) 738, 775
Bbv12I GWGCWC 2 cut(s) 621, 808
BbvCI CCTCAGC 2 cut(s) 768, 907
BbvI GCAGC 2 cut(s) 294, 1415
BccI CCATC 3 cut(s) 503, 522, 578
BceAI ACGGC 1 cut(s) 233
BcgI CGANNNNNNTGC 2 cut(s) 1328, 1362
BciT130I CCWGG 5 cut(s) 98, 157, 554, 676, 1269
BciVI GTATCC 1 cut(s) 414
BcnI CCSGG 1 cut(s) 1043
BcoDI GTCTC 4 cut(s) 722, 1250, 1304, 1358
BfaI CTAG 6 cut(s) 483, 900, 938, 954, 1124, 1178
BfmI CTRYAG 1 cut(s) 308
BfoI RGCGCY 1 cut(s) 968
BfuI GTATCC 1 cut(s) 414
BglI GCCNNNNNGGC 1 cut(s) 554
BglII AGATCT 1 cut(s) 1243
BisI GCNGC 4 cut(s) 308, 912, 1083, 1404
BlsI GCNGC 4 cut(s) 309, 913, 1084, 1405
Bme1390I CCNGG 6 cut(s) 98, 157, 554, 676, 1043, 1269
Bme18I GGWCC 7 cut(s) 463, 658, 859, 870, 1004, 1129, 1417
BmeT110I CYCGRG 1 cut(s) 1197
BmiI GGNNCC 8 cut(s) 154, 293, 354, 762, 966, 1152, 1153, 1154
BmrFI CCNGG 6 cut(s) 98, 157, 554, 676, 1043, 1269
BmrI ACTGGG 2 cut(s) 159, 516
BmsI GCATC 5 cut(s) 31, 447, 956, 1003, 1225
BmuI ACTGGG 2 cut(s) 159, 516
BpiI GAAGAC 2 cut(s) 738, 775
BpmI CTGGAG 1 cut(s) 697
Bpu10I CCTNAGC 4 cut(s) 768, 890, 907, 1425
BpuMI CCSGG 1 cut(s) 1043
Bsa29I ATCGAT 1 cut(s) 363
BsaBI GATNNNNATC 1 cut(s) 759
BsaHI GRCGYC 1 cut(s) 965
BsaI GGTCTC 1 cut(s) 1304
BsaJI CCNNGG 6 cut(s) 155, 202, 1041, 1116, 1218, 1267
Bsc4I CCNNNNNNNGG 9 cut(s) 218, 375, 528, 681, 895, 1072, 1273, 1274, 1426
Bse118I RCCGGY 1 cut(s) 1250
Bse1I ACTGG 3 cut(s) 154, 522, 661
Bse21I CCTNAGG 1 cut(s) 735
Bse8I GATNNNNATC 1 cut(s) 759
BseBI CCWGG 5 cut(s) 98, 157, 554, 676, 1269
BseCI ATCGAT 1 cut(s) 363
BseDI CCNNGG 6 cut(s) 155, 202, 1041, 1116, 1218, 1267
BseGI GGATG 4 cut(s) 533, 994, 1263, 1285
BseJI GATNNNNATC 1 cut(s) 759
BseLI CCNNNNNNNGG 9 cut(s) 218, 375, 528, 681, 895, 1072, 1273, 1274, 1426
BseMII CTCAG 7 cut(s) 726, 759, 881, 921, 1062, 1398, 1439
BseNI ACTGG 3 cut(s) 154, 522, 661
BseRI GAGGAG 2 cut(s) 486, 1235
BseSI GKGCMC 2 cut(s) 156, 1155
BseXI GCAGC 2 cut(s) 294, 1415
BseYI CCCAGC 1 cut(s) 66
BsgI GTGCAG 1 cut(s) 46
Bsh1236I CGCG 3 cut(s) 51, 567, 606
Bsh1285I CGRYCG 1 cut(s) 604
BshNI GGYRCC 1 cut(s) 964
BshVI ATCGAT 1 cut(s) 363
BsiEI CGRYCG 1 cut(s) 604
BsiHKAI GWGCWC 2 cut(s) 621, 808
BsiHKCI CYCGRG 1 cut(s) 1197
BsiSI CCGG 4 cut(s) 461, 1043, 1251, 1400
BslI CCNNNNNNNGG 9 cut(s) 218, 375, 528, 681, 895, 1072, 1273, 1274, 1426
BsmAI GTCTC 4 cut(s) 722, 1250, 1304, 1358
BsmBI CGTCTC 2 cut(s) 1250, 1358
BsmI GAATGC 2 cut(s) 92, 855
Bso31I GGTCTC 1 cut(s) 1304
BsoBI CYCGRG 1 cut(s) 1197
Bsp120I GGGCCC 2 cut(s) 152, 1151
Bsp1286I GDGCHC 4 cut(s) 156, 621, 808, 1155
Bsp143I GATC 8 cut(s) 291, 352, 532, 760, 799, 877, 902, 1243
BspACI CCGC 7 cut(s) 336, 604, 765, 912, 998, 1083, 1148
BspCNI CTCAG 7 cut(s) 727, 760, 882, 920, 1063, 1399, 1438
BspDI ATCGAT 1 cut(s) 363
BspFNI CGCG 3 cut(s) 51, 567, 606
BspHI TCATGA 1 cut(s) 751
BspLI GGNNCC 8 cut(s) 154, 293, 354, 762, 966, 1152, 1153, 1154
BspMAI CTGCAG 1 cut(s) 312
BspPI GGATC 8 cut(s) 286, 299, 347, 360, 540, 755, 768, 897
BspQI GCTCTTC 1 cut(s) 915
BspT107I GGYRCC 1 cut(s) 964
BspTNI GGTCTC 1 cut(s) 1304
BsrFI RCCGGY 1 cut(s) 1250
BsrI ACTGG 3 cut(s) 154, 522, 661
BssAI RCCGGY 1 cut(s) 1250
BssECI CCNNGG 6 cut(s) 155, 202, 1041, 1116, 1218, 1267
BssMI GATC 8 cut(s) 291, 352, 532, 760, 799, 877, 902, 1243
BssNI GRCGYC 1 cut(s) 965
BssSI CACGAG 1 cut(s) 959
BssT1I CCWWGG 1 cut(s) 202
Bst2BI CACGAG 1 cut(s) 959
Bst2UI CCWGG 5 cut(s) 98, 157, 554, 676, 1269
Bst4CI ACNGT 1 cut(s) 781
Bst6I CTCTTC 4 cut(s) 447, 813, 915, 975
BstACI GRCGYC 1 cut(s) 965
BstC8I GCNNGC 4 cut(s) 643, 1252, 1288, 1327
BstDEI CTNAG 7 cut(s) 735, 768, 890, 907, 1071, 1407, 1425
BstDSI CCRYGG 1 cut(s) 1116
BstEII GGTNACC 1 cut(s) 1166
BstENI CCTNNNNNAGG 2 cut(s) 679, 893
BstF5I GGATG 4 cut(s) 533, 994, 1263, 1285
BstFNI CGCG 3 cut(s) 51, 567, 606
BstH2I RGCGCY 1 cut(s) 968
BstHHI GCGC 4 cut(s) 51, 258, 569, 967
BstKTI GATC 8 cut(s) 294, 355, 535, 763, 802, 880, 905, 1246
BstMAI GTCTC 4 cut(s) 722, 1250, 1304, 1358
BstMBI GATC 8 cut(s) 291, 352, 532, 760, 799, 877, 902, 1243
BstMCI CGRYCG 1 cut(s) 604
BstMWI GCNNNNNNNGC 4 cut(s) 333, 554, 1062, 1082
BstNI CCWGG 5 cut(s) 98, 157, 554, 676, 1269
BstPI GGTNACC 1 cut(s) 1166
BstSCI CCNGG 6 cut(s) 96, 155, 552, 674, 1041, 1267
BstSFI CTRYAG 1 cut(s) 308
BstSLI GKGCMC 2 cut(s) 156, 1155
BstUI CGCG 3 cut(s) 51, 567, 606
BstV1I GCAGC 2 cut(s) 294, 1415
BstV2I GAAGAC 2 cut(s) 738, 775
BstX2I RGATCY 5 cut(s) 291, 352, 760, 902, 1243
BstYI RGATCY 5 cut(s) 291, 352, 760, 902, 1243
Bsu15I ATCGAT 1 cut(s) 363
Bsu36I CCTNAGG 1 cut(s) 735
BsuI GTATCC 1 cut(s) 414
BsuTUI ATCGAT 1 cut(s) 363
BtgI CCRYGG 1 cut(s) 1116
BtsCI GGATG 4 cut(s) 533, 994, 1263, 1285
BtsI GCAGTG 1 cut(s) 1297
BtsIMutI CAGTG 3 cut(s) 529, 873, 1297
Cac8I GCNNGC 4 cut(s) 643, 1252, 1288, 1327
CciI TCATGA 1 cut(s) 751
CfoI GCGC 4 cut(s) 51, 258, 569, 967
Cfr10I RCCGGY 1 cut(s) 1250
ClaI ATCGAT 1 cut(s) 363
Csp6I GTAC 5 cut(s) 442, 1121, 1175, 1215, 1261
CviAII CATG 4 cut(s) 71, 752, 1049, 1172
CviQI GTAC 5 cut(s) 442, 1121, 1175, 1215, 1261
DdeI CTNAG 7 cut(s) 735, 768, 890, 907, 1071, 1407, 1425
DinI GGCGCC 1 cut(s) 966
DpnI GATC 8 cut(s) 293, 354, 534, 762, 801, 879, 904, 1245
DpnII GATC 8 cut(s) 291, 352, 532, 760, 799, 877, 902, 1243
EaeI YGGCCR 1 cut(s) 1248
Eam1104I CTCTTC 4 cut(s) 447, 813, 915, 975
EarI CTCTTC 4 cut(s) 447, 813, 915, 975
Ecl136II GAGCTC 2 cut(s) 619, 806
Eco130I CCWWGG 1 cut(s) 202
Eco24I GRGCYC 4 cut(s) 156, 621, 808, 1155
Eco31I GGTCTC 1 cut(s) 1304
Eco32I GATATC 1 cut(s) 1183
Eco47I GGWCC 7 cut(s) 463, 658, 859, 870, 1004, 1129, 1417
Eco53kI GAGCTC 2 cut(s) 619, 806
Eco57I CTGAAG 1 cut(s) 900
Eco81I CCTNAGG 1 cut(s) 735
Eco88I CYCGRG 1 cut(s) 1197
Eco91I GGTNACC 1 cut(s) 1166
EcoICRI GAGCTC 2 cut(s) 619, 806
EcoNI CCTNNNNNAGG 2 cut(s) 679, 893
EcoO109I RGGNCCY 4 cut(s) 153, 1004, 1151, 1152
EcoO65I GGTNACC 1 cut(s) 1166
EcoRI GAATTC 2 cut(s) 101, 160
EcoRII CCWGG 5 cut(s) 96, 155, 552, 674, 1267
EcoRV GATATC 1 cut(s) 1183
EcoT14I CCWWGG 1 cut(s) 202
EcoT38I GRGCYC 4 cut(s) 156, 621, 808, 1155
EgeI GGCGCC 1 cut(s) 966
EheI GGCGCC 1 cut(s) 966
ErhI CCWWGG 1 cut(s) 202
Esp3I CGTCTC 2 cut(s) 1250, 1358
FaeI CATG 4 cut(s) 74, 755, 1052, 1175
FatI CATG 4 cut(s) 70, 751, 1048, 1171
FauI CCCGC 2 cut(s) 772, 1141
Fnu4HI GCNGC 4 cut(s) 308, 912, 1083, 1404
FokI GGATG 4 cut(s) 540, 981, 1250, 1292
FriOI GRGCYC 4 cut(s) 156, 621, 808, 1155
Fsp4HI GCNGC 4 cut(s) 308, 912, 1083, 1404
FspBI CTAG 6 cut(s) 483, 900, 938, 954, 1124, 1178
GlaI GCGC 4 cut(s) 50, 257, 568, 966
GluI GCNGC 4 cut(s) 308, 912, 1083, 1404
GsaI CCCAGC 1 cut(s) 70
GsuI CTGGAG 1 cut(s) 697
HaeII RGCGCY 1 cut(s) 968
HapII CCGG 4 cut(s) 461, 1043, 1251, 1400
HhaI GCGC 4 cut(s) 51, 258, 569, 967
Hin1I GRCGYC 1 cut(s) 965
Hin1II CATG 4 cut(s) 74, 755, 1052, 1175
Hin6I GCGC 4 cut(s) 49, 256, 567, 965
HinP1I GCGC 4 cut(s) 49, 256, 567, 965
HinfI GANTC 7 cut(s) 365, 730, 743, 1037, 1111, 1205, 1394
HpaII CCGG 4 cut(s) 461, 1043, 1251, 1400
HphI GGTGA 3 cut(s) 350, 1150, 1178
Hpy188I TCNGA 5 cut(s) 919, 1030, 1072, 1312, 1417
Hpy188III TCNNGA 5 cut(s) 734, 752, 1199, 1303, 1391
Hpy99I CGWCG 1 cut(s) 567
HpyAV CCTTC 3 cut(s) 271, 1166, 1334
HpyCH4III ACNGT 1 cut(s) 781
HpyCH4IV ACGT 3 cut(s) 396, 1022, 1259
HpyCH4V TGCA 4 cut(s) 63, 114, 129, 310
HpyF10VI GCNNNNNNNGC 4 cut(s) 333, 554, 1062, 1082
HpyF3I CTNAG 7 cut(s) 735, 768, 890, 907, 1071, 1407, 1425
HpySE526I ACGT 3 cut(s) 396, 1022, 1259
Hsp92I GRCGYC 1 cut(s) 965
Hsp92II CATG 4 cut(s) 74, 755, 1052, 1175
HspAI GCGC 4 cut(s) 49, 256, 567, 965
KasI GGCGCC 1 cut(s) 964
KroI GCCGGC 1 cut(s) 1250
KroNI GCCGGC 1 cut(s) 1252
Kzo9I GATC 8 cut(s) 291, 352, 532, 760, 799, 877, 902, 1243
LguI GCTCTTC 1 cut(s) 915
LmnI GCTCC 3 cut(s) 239, 678, 1045
Lsp1109I GCAGC 2 cut(s) 294, 1415
LweI GCATC 5 cut(s) 31, 447, 956, 1003, 1225
MaeI CTAG 6 cut(s) 483, 900, 938, 954, 1124, 1178
MaeII ACGT 3 cut(s) 396, 1022, 1259
MaeIII GTNAC 1 cut(s) 1166
MalI GATC 8 cut(s) 293, 354, 534, 762, 801, 879, 904, 1245
MboI GATC 8 cut(s) 291, 352, 532, 760, 799, 877, 902, 1243
MboII GAAGA 9 cut(s) 126, 464, 738, 775, 830, 842, 932, 962, 1253
MflI RGATCY 5 cut(s) 291, 352, 760, 902, 1243
MhlI GDGCHC 4 cut(s) 156, 621, 808, 1155
Mly113I GGCGCC 1 cut(s) 965
MlyI GAGTC 3 cut(s) 724, 752, 1031
MmeI TCCRAC 4 cut(s) 162, 429, 1381, 1395
MroNI GCCGGC 1 cut(s) 1250
MseI TTAA 1 cut(s) 1383
MspA1I CMGCKG 2 cut(s) 767, 1406
MspI CCGG 4 cut(s) 461, 1043, 1251, 1400
MspR9I CCNGG 6 cut(s) 98, 157, 554, 676, 1043, 1269
Mva1269I GAATGC 2 cut(s) 92, 855
MvaI CCWGG 5 cut(s) 98, 157, 554, 676, 1269
MvnI CGCG 3 cut(s) 51, 567, 606
MwoI GCNNNNNNNGC 4 cut(s) 333, 554, 1062, 1082
NaeI GCCGGC 1 cut(s) 1252
NarI GGCGCC 1 cut(s) 965
NciI CCSGG 1 cut(s) 1043
NdeII GATC 8 cut(s) 291, 352, 532, 760, 799, 877, 902, 1243
NgoMIV GCCGGC 1 cut(s) 1250
NlaIII CATG 4 cut(s) 74, 755, 1052, 1175
NlaIV GGNNCC 8 cut(s) 154, 293, 354, 762, 966, 1152, 1153, 1154
NmeAIII GCCGAG 1 cut(s) 727
NmuCI GTSAC 1 cut(s) 1166
PaeR7I CTCGAG 1 cut(s) 1197
PagI TCATGA 1 cut(s) 751
PciSI GCTCTTC 1 cut(s) 915
PcsI WCGNNNNNNNCGW 1 cut(s) 1326
PctI GAATGC 2 cut(s) 92, 855
PdiI GCCGGC 1 cut(s) 1252
PfeI GAWTC 4 cut(s) 365, 1111, 1205, 1394
PflMI CCANNNNNTGG 1 cut(s) 528
PfoI TCCNGGA 1 cut(s) 96
PkrI GCNGC 4 cut(s) 309, 913, 1084, 1405
PleI GAGTC 3 cut(s) 724, 751, 1031
PluTI GGCGCC 1 cut(s) 968
PpsI GAGTC 3 cut(s) 724, 751, 1031
PpuMI RGGWCCY 1 cut(s) 1004
PsiI TTATAA 1 cut(s) 243
Psp124BI GAGCTC 2 cut(s) 621, 808
Psp1406I AACGTT 1 cut(s) 1022
Psp5II RGGWCCY 1 cut(s) 1004
Psp6I CCWGG 5 cut(s) 96, 155, 552, 674, 1267
PspEI GGTNACC 1 cut(s) 1166
PspFI CCCAGC 1 cut(s) 66
PspGI CCWGG 5 cut(s) 96, 155, 552, 674, 1267
PspN4I GGNNCC 8 cut(s) 154, 293, 354, 762, 966, 1152, 1153, 1154
PspOMI GGGCCC 2 cut(s) 152, 1151
PspPPI RGGWCCY 1 cut(s) 1004
PstI CTGCAG 1 cut(s) 312
PsuI RGATCY 5 cut(s) 291, 352, 760, 902, 1243
PvuII CAGCTG 1 cut(s) 1406
RsaI GTAC 5 cut(s) 443, 1122, 1176, 1216, 1262
RsaNI GTAC 5 cut(s) 442, 1121, 1175, 1215, 1261
SacI GAGCTC 2 cut(s) 621, 808
SapI GCTCTTC 1 cut(s) 915
SaqAI TTAA 1 cut(s) 1383
SatI GCNGC 4 cut(s) 308, 912, 1083, 1404
Sau3AI GATC 8 cut(s) 291, 352, 532, 760, 799, 877, 902, 1243
SchI GAGTC 3 cut(s) 724, 752, 1031
ScrFI CCNGG 6 cut(s) 98, 157, 554, 676, 1043, 1269
SduI GDGCHC 4 cut(s) 156, 621, 808, 1155
SfaNI GCATC 5 cut(s) 31, 447, 956, 1003, 1225
SfcI CTRYAG 1 cut(s) 308
SfoI GGCGCC 1 cut(s) 966
Sfr274I CTCGAG 1 cut(s) 1197
SinI GGWCC 7 cut(s) 463, 658, 859, 870, 1004, 1129, 1417
SlaI CTCGAG 1 cut(s) 1197
SmlI CTYRAG 1 cut(s) 1197
SmoI CTYRAG 1 cut(s) 1197
SsiI CCGC 7 cut(s) 336, 604, 765, 912, 998, 1083, 1148
SspDI GGCGCC 1 cut(s) 964
SspMI CTAG 6 cut(s) 483, 900, 938, 954, 1124, 1178
SstI GAGCTC 2 cut(s) 621, 808
StyD4I CCNGG 6 cut(s) 96, 155, 552, 674, 1041, 1267
StyI CCWWGG 1 cut(s) 202
TaaI ACNGT 1 cut(s) 781
TaiI ACGT 3 cut(s) 399, 1025, 1262
TaqI TCGA 6 cut(s) 264, 363, 802, 816, 1185, 1198
TatI WGTACW 2 cut(s) 441, 1174
TauI GCSGC 2 cut(s) 914, 1085
TfiI GAWTC 4 cut(s) 365, 1111, 1205, 1394
Tru1I TTAA 1 cut(s) 1383
Tru9I TTAA 1 cut(s) 1383
TscAI CASTG 3 cut(s) 529, 880, 1297
TseFI GTSAC 1 cut(s) 1166
TseI GCWGC 2 cut(s) 307, 1403
Tsp45I GTSAC 1 cut(s) 1166
TspDTI ATGAA 4 cut(s) 1065, 1158, 1386, 1472
TspGWI ACGGA 2 cut(s) 320, 851
TspRI CASTG 3 cut(s) 529, 880, 1297
Van91I CCANNNNNTGG 1 cut(s) 528
VpaK11BI GGWCC 7 cut(s) 463, 658, 859, 870, 1004, 1129, 1417
XagI CCTNNNNNAGG 2 cut(s) 679, 893
XapI RAATTY 4 cut(s) 101, 116, 160, 1385
XcmI CCANNNNNNNNNTGG 1 cut(s) 577
XhoI CTCGAG 1 cut(s) 1197
XspI CTAG 6 cut(s) 483, 900, 938, 954, 1124, 1178
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.