Rmu_sc0023004.1_g000001

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0023004.1
OG0000214
Physical Location & Seq
Reverse (-)
501 .. 4057
3557 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0023004.1_g000001.1.cds

Sequence Viewer

Length: 2901 bp
atggcatccaagaaaccattcgttattgatcaggcagatgaaatcactgagaaagccgcattcaactggcggactaacatgagtattcgatgtagacgtcaaaccggagaggagagaagccgactgatgggctttggtggtggtgatagtcaagcgagtctgggtcccacacctcgagatcgtttgccagacgatgctatagcctattatgggcttcccatccgccgtcccatagcggctcttcggcaagtgcctggtgattttagcagttggggaccaaggaggaaagtgggcttctgtcctactgtcactccggaggaaaaagtttggtatcaggaggtccgagcgagagatttggaccgatgggacgcggtgggcatcacccaaaccatcgatctatgcttctgtcttccccataatactagccctgcaccactagccgccgctctttgcttctggaacacctccagcaatacattcgatttccggtttgggcagatgagcataactctgctggatgttcttaccatcacggggttgcccattgactttgacccctatgtgcatggtcaatttgatggcaatcaattttctttgagaatggatatggctggtcgagggcatcacaacaaatcctacccattctggcgcgactattactacacccagcgagaccatacaggaggtatcgcattcctggaattctggctttgcaaatttatcttttgcacttcttccaacaaacctactgggccctggaattctctggtcactgctctctacaatggtatttgcgttggccttgggcaacctgtattgggtgcgttatatcgttccttttatagggccgtaatgcgcccctttgataccgacattagtggccctttctggattcttgtcttttggctacaaatttatttccctcgcttccgtcgctatgatattccaaaggaacctccagtcgattcccttttggggaactggctttgccgcaatgtaaggtatcaagctcctccctactccgagtgttttatttacttgtacttgctgggagagatgccggacccaaaaatagtcttttctaggcgtttccctcctccccttgacgatggctttctacccaatggacgggatcatagcgaaagagctctcctggcctttcgtcgcgccatctcctgcttggatattcgtcttgccaccgactacgtaagttatgagctctatgcccctaaccacttcgctcgccaatttgggttggcccagttggtacactggcctctggttgattctgctaattattacacctcttggcagagattagccccactggggtctgccccctttcagagtcagtttactttgatagtgattcccccttgggtcatagcgctataccccctcaacgatgtcgatgacgactatgctgattggtggaaagaagtgtcagtgaactgttgggacctgtcacatgacgaactcttcgtcctgatctttcgtggcatgagtagccctggtctggaggaccgcgagattcttgagcgcttctccaaacctgcagaacaacccccgcgacctattctaccttctcgctcattgcgtccagggatacaaatccacgagcctagggccatacaaactacccagagcaggacagcctctgttcaggccgggaaacaaaaggcaatagcagaggagacttctgagggagaatcttcgcatgatgaagatcatgctgaggtaatttggccactgctgtcttttcttgcaaacgtgataggtctcaatccgtcgaagaagacttctgagggagagtcttcgcatgatgaagatcctgctgaggccactgctgtatttgcttgcaaacgcgatcgagatcaattcgtcaaagagaattttgaagatgatgaacctctgggaatgcgactgcatctgcaaagtcctaccattctaataacgatctctgatgacgactcctcggaggatgaaagcgtggaaagccactctgaaacttctgccgcttatgaggaactgatgacgacagagattctcgtggcactagaggttcaagaggtgaatgaggcggggcctcttcctcttggtgaccacgtaccagatatcgacccgacaactcgagaggattctgtttgtaccgaggaggtggctgcaaatgctggtcttatcggcgggacagtcgccccagagatggaaaatgatactaacggtggtggtgccccccaagtctcgcaaacaaatgagacaaccgtcgaagctgagggctgtgtgcttgaatctgctccacttgcccacggtgagccgctagttgggtttccagattcccctgaggctgaagggatagaccaacctgttgaagatgaagaaactgaggaatttgtccacccttttgcattggtggttcgtgatcctgtggcgcctctgccgcctccttctcctaccagattcgagagattgatgagggtgttggaggtaactcctccttctgctgtggatgaggctaagatggtacttcacgaacatctgggtcctcaggtattggagactgacatcctcccgcgagtcttgggagctctaaggtatcttcgccaggagaaggttttgactctgtgtcaatttagtgctatcgactctctgctgaatgaacttgatatggcccgccgacgtcaattggccgcgaacacccaggctcgcgaagctcaagaggctttgaataaagctcaactcgatgaacctttggctgcttctgaagaaatgggccgcaacctggcccgtatcagagatcgggccactcaggccgaagctggtgccattgcagcgaaacgccacgtggaggaactttgtttgaaattgagctttgcaggccaatctttgtgggccccctcataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

966

Amino Acids

108.42

Weight (kDa)

4.83

Isoelectric Point (pI)

52.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000214)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0079611
rosa_multiflora Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha Rh3DG208400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 100, 2680
Acc36I ACCTGC 1 cut(s) 1561
AccB1I GGYRCC 3 cut(s) 2228, 2428, 2819
AccBSI CCGCTC 1 cut(s) 446
AccI GTMKAC 1 cut(s) 94
AccII CGCG 9 cut(s) 371, 651, 1167, 1527, 1570, 1866, 2572, 2690, 2706
AccIII TCCGGA 1 cut(s) 313
AclWI GGATC 3 cut(s) 1140, 1823, 2414
AcoI YGGCCR 2 cut(s) 1745, 2685
AcsI RAATTY 6 cut(s) 701, 716, 760, 912, 1891, 2387
AcuI CTGAAG 2 cut(s) 2367, 2781
AcvI CACGTG 1 cut(s) 2842
AcyI GRCGYC 3 cut(s) 97, 2429, 2677
AfaI GTAC 5 cut(s) 1043, 1269, 2109, 2149, 2523
AfeI AGCGCT 2 cut(s) 1389, 1541
AgsI TTSAA 7 cut(s) 64, 1898, 2066, 2288, 2369, 2725, 2860
AhdI GACNNNNNGTC 1 cut(s) 2622
AjnI CCWGG 9 cut(s) 253, 696, 755, 1152, 1510, 1600, 2601, 2697, 2778
AjuI GAANNNNNNNTTGG 1 cut(s) 34
AloI GAACNNNNNNTCC 2 cut(s) 1467, 1499
AluBI AGCT 9 cut(s) 1010, 1148, 1219, 2270, 2585, 2711, 2732, 2816, 2868
AluI AGCT 9 cut(s) 1010, 1148, 1219, 2270, 2585, 2711, 2732, 2816, 2868
Alw21I GWGCWC 3 cut(s) 1150, 1221, 2587
Alw26I GTCTC 6 cut(s) 666, 1688, 1784, 2245, 2249, 2549
AlwI GGATC 3 cut(s) 1140, 1823, 2414
AlwNI CAGNNNCTG 1 cut(s) 1658
Ama87I CYCGRG 2 cut(s) 174, 2130
Aor13HI TCCGGA 1 cut(s) 313
Aor51HI AGCGCT 2 cut(s) 1389, 1541
ApaI GGGCCC 2 cut(s) 756, 2893
ApeKI GCWGC 3 cut(s) 2162, 2753, 2828
ApoI RAATTY 6 cut(s) 701, 716, 760, 912, 1891, 2387
ArsI GACNNNNNNTTYG 4 cut(s) 1463, 1467, 1495, 1499
Asp700I GAANNNNTTC 1 cut(s) 17
AspA2I CCTAGG 1 cut(s) 1622
AspLEI GCGC 6 cut(s) 651, 858, 1169, 1390, 1542, 2431
AsuC2I CCSGG 1 cut(s) 1669
AsuHPI GGTGA 6 cut(s) 155, 269, 373, 2083, 2111, 2321
AvaI CYCGRG 2 cut(s) 174, 2130
AvaII GGWCC 8 cut(s) 164, 275, 340, 358, 1063, 1459, 1522, 2540
AvrII CCTAGG 1 cut(s) 1622
AxyI CCTNAGG 2 cut(s) 2340, 2544
BaeGI GKGCMC 3 cut(s) 756, 2233, 2893
BalI TGGCCA 1 cut(s) 1747
BanI GGYRCC 3 cut(s) 2228, 2428, 2819
BanII GRGCYC 5 cut(s) 756, 1150, 1221, 2587, 2893
BauI CACGAG 2 cut(s) 1616, 2048
BbrPI CACGTG 1 cut(s) 2842
BbsI GAAGAC 3 cut(s) 401, 1802, 1806
Bbv12I GWGCWC 3 cut(s) 1150, 1221, 2587
BbvCI CCTCAGC 3 cut(s) 1734, 1836, 2271
BbvI GCAGC 3 cut(s) 2149, 2740, 2840
BceAI ACGGC 2 cut(s) 210, 833
BcgI CGANNNNNNTGC 4 cut(s) 460, 494, 2801, 2835
BciT130I CCWGG 9 cut(s) 255, 698, 757, 1154, 1512, 1602, 2603, 2699, 2780
BciVI GTATCC 1 cut(s) 1599
BclI TGATCA 1 cut(s) 28
BcnI CCSGG 1 cut(s) 1669
BcoDI GTCTC 6 cut(s) 666, 1688, 1784, 2245, 2249, 2549
BfaI CTAG 6 cut(s) 423, 437, 1083, 1623, 2057, 2318
BfmI CTRYAG 2 cut(s) 198, 1554
BfoI RGCGCY 3 cut(s) 1391, 1543, 2432
BfuAI ACCTGC 1 cut(s) 1561
BfuI GTATCC 1 cut(s) 1599
BglI GCCNNNNNGGC 1 cut(s) 2807
BlnI CCTAGG 1 cut(s) 1622
Bme18I GGWCC 8 cut(s) 164, 275, 340, 358, 1063, 1459, 1522, 2540
BmeRI GACNNNNNGTC 1 cut(s) 2622
BmeT110I CYCGRG 2 cut(s) 174, 2130
BmrI ACTGGG 3 cut(s) 759, 1255, 1337
BmsI GCATC 6 cut(s) 14, 184, 387, 631, 1047, 1936
BmuI ACTGGG 3 cut(s) 759, 1255, 1337
BoxI GACNNNNGTC 1 cut(s) 2261
BpiI GAAGAC 3 cut(s) 401, 1802, 1806
BplI GAGNNNNNCTC 4 cut(s) 493, 525, 1529, 1561
BpmI CTGGAG 3 cut(s) 451, 942, 1538
Bpu10I CCTNAGC 3 cut(s) 1734, 1836, 2271
BpuEI CTTGAG 2 cut(s) 1556, 2697
BpuMI CCSGG 1 cut(s) 1669
Bsa29I ATCGAT 1 cut(s) 393
BsaAI YACGTR 3 cut(s) 1207, 2107, 2842
BsaBI GATNNNNATC 5 cut(s) 582, 1610, 1725, 1827, 1872
BsaHI GRCGYC 3 cut(s) 97, 2429, 2677
BsaI GGTCTC 2 cut(s) 666, 1784
BsaWI WCCGGW 3 cut(s) 104, 313, 486
BsaXI ACNNNNNCTCC 2 cut(s) 295, 325
Bse1I ACTGG 7 cut(s) 71, 754, 959, 986, 1261, 1277, 1332
Bse21I CCTNAGG 2 cut(s) 2340, 2544
Bse3DI GCAATG 3 cut(s) 1000, 1592, 2823
Bse8I GATNNNNATC 5 cut(s) 582, 1610, 1725, 1827, 1872
BseAI TCCGGA 1 cut(s) 313
BseBI CCWGG 9 cut(s) 255, 698, 757, 1154, 1512, 1602, 2603, 2699, 2780
BseCI ATCGAT 1 cut(s) 393
BseGI GGATG 6 cut(s) 5, 219, 523, 1987, 2512, 2562
BseJI GATNNNNATC 5 cut(s) 582, 1610, 1725, 1827, 1872
BseMI GCAATG 3 cut(s) 1000, 1592, 2823
BseNI ACTGG 7 cut(s) 71, 754, 959, 986, 1261, 1277, 1332
BseRI GAGGAG 7 cut(s) 125, 1002, 1086, 1706, 1963, 2168, 2481
BseSI GKGCMC 3 cut(s) 756, 2233, 2893
BseXI GCAGC 3 cut(s) 2149, 2740, 2840
BseYI CCCAGC 2 cut(s) 666, 1048
BsgI GTGCAG 1 cut(s) 414
Bsh1236I CGCG 9 cut(s) 371, 651, 1167, 1527, 1570, 1866, 2572, 2690, 2706
Bsh1285I CGRYCG 1 cut(s) 1870
BshNI GGYRCC 3 cut(s) 2228, 2428, 2819
BshVI ATCGAT 1 cut(s) 393
BsiEI CGRYCG 1 cut(s) 1870
BsiHKAI GWGCWC 3 cut(s) 1150, 1221, 2587
BsiHKCI CYCGRG 2 cut(s) 174, 2130
BsiSI CCGG 5 cut(s) 105, 314, 487, 1061, 1668
BslFI GGGAC 6 cut(s) 150, 213, 288, 380, 1472, 2200
BsmAI GTCTC 6 cut(s) 666, 1688, 1784, 2245, 2249, 2549
BsmFI GGGAC 6 cut(s) 150, 213, 288, 380, 1472, 2200
BsmI GAATGC 3 cut(s) 59, 692, 1923
Bso31I GGTCTC 2 cut(s) 666, 1784
BsoBI CYCGRG 2 cut(s) 174, 2130
Bsp120I GGGCCC 2 cut(s) 752, 2889
Bsp1286I GDGCHC 6 cut(s) 756, 1150, 1221, 2233, 2587, 2893
Bsp13I TCCGGA 1 cut(s) 313
Bsp68I TCGCGA 1 cut(s) 2706
BspDI ATCGAT 1 cut(s) 393
BspEI TCCGGA 1 cut(s) 313
BspFNI CGCG 9 cut(s) 371, 651, 1167, 1527, 1570, 1866, 2572, 2690, 2706
BspMAI CTGCAG 1 cut(s) 1558
BspMI ACCTGC 1 cut(s) 1561
BspPI GGATC 3 cut(s) 1140, 1823, 2414
BspQI GCTCTTC 1 cut(s) 246
BspT107I GGYRCC 3 cut(s) 2228, 2428, 2819
BspTNI GGTCTC 2 cut(s) 666, 1784
BsrBI CCGCTC 1 cut(s) 446
BsrDI GCAATG 3 cut(s) 1000, 1592, 2823
BsrI ACTGG 7 cut(s) 71, 754, 959, 986, 1261, 1277, 1332
BssNI GRCGYC 3 cut(s) 97, 2429, 2677
BssSI CACGAG 2 cut(s) 1616, 2048
BssT1I CCWWGG 4 cut(s) 278, 802, 1376, 1622
Bst2BI CACGAG 2 cut(s) 1616, 2048
Bst2UI CCWGG 9 cut(s) 255, 698, 757, 1154, 1512, 1602, 2603, 2699, 2780
Bst4CI ACNGT 6 cut(s) 307, 1454, 2191, 2222, 2263, 2309
Bst6I CTCTTC 3 cut(s) 246, 1484, 2094
BstACI GRCGYC 3 cut(s) 97, 2429, 2677
BstBAI YACGTR 3 cut(s) 1207, 2107, 2842
BstC8I GCNNGC 5 cut(s) 1243, 1858, 2671, 2704, 2875
BstDSI CCRYGG 1 cut(s) 2305
BstEII GGTNACC 1 cut(s) 2099
BstENI CCTNNNNNAGG 1 cut(s) 841
BstF5I GGATG 6 cut(s) 5, 219, 523, 1987, 2512, 2562
BstFNI CGCG 9 cut(s) 371, 651, 1167, 1527, 1570, 1866, 2572, 2690, 2706
BstH2I RGCGCY 3 cut(s) 1391, 1543, 2432
BstHHI GCGC 6 cut(s) 651, 858, 1169, 1390, 1542, 2431
BstMAI GTCTC 6 cut(s) 666, 1688, 1784, 2245, 2249, 2549
BstMCI CGRYCG 1 cut(s) 1870
BstNI CCWGG 9 cut(s) 255, 698, 757, 1154, 1512, 1602, 2603, 2699, 2780
BstPAI GACNNNNGTC 1 cut(s) 2261
BstPI GGTNACC 1 cut(s) 2099
BstSFI CTRYAG 2 cut(s) 198, 1554
BstSLI GKGCMC 3 cut(s) 756, 2233, 2893
BstSNI TACGTA 1 cut(s) 1207
BstUI CGCG 9 cut(s) 371, 651, 1167, 1527, 1570, 1866, 2572, 2690, 2706
BstV1I GCAGC 3 cut(s) 2149, 2740, 2840
BstV2I GAAGAC 3 cut(s) 401, 1802, 1806
BstX2I RGATCY 1 cut(s) 1828
BstYI RGATCY 1 cut(s) 1828
Bsu15I ATCGAT 1 cut(s) 393
Bsu36I CCTNAGG 2 cut(s) 2340, 2544
BsuI GTATCC 1 cut(s) 1599
BsuTUI ATCGAT 1 cut(s) 393
BtgI CCRYGG 1 cut(s) 2305
BtsCI GGATG 6 cut(s) 5, 219, 523, 1987, 2512, 2562
BtsI GCAGTG 3 cut(s) 771, 1748, 1842
BtsIMutI CAGTG 7 cut(s) 45, 771, 1270, 1325, 1452, 1748, 1842
BtuMI TCGCGA 1 cut(s) 2706
BveI ACCTGC 1 cut(s) 1561
Cac8I GCNNGC 5 cut(s) 1243, 1858, 2671, 2704, 2875
CaiI CAGNNNCTG 1 cut(s) 1658
CfoI GCGC 6 cut(s) 651, 858, 1169, 1390, 1542, 2431
ClaI ATCGAT 1 cut(s) 393
CseI GACGC 2 cut(s) 377, 1586
Csp6I GTAC 5 cut(s) 1042, 1268, 2108, 2148, 2522
CspCI CAANNNNNGTGG 1 cut(s) 2867
CviAII CATG 7 cut(s) 79, 566, 1469, 1501, 1718, 1730, 1820
CviQI GTAC 5 cut(s) 1042, 1268, 2108, 2148, 2522
DinI GGCGCC 1 cut(s) 2430
DriI GACNNNNNGTC 1 cut(s) 2622
EaeI YGGCCR 2 cut(s) 1745, 2685
Eam1104I CTCTTC 3 cut(s) 246, 1484, 2094
Eam1105I GACNNNNNGTC 1 cut(s) 2622
EarI CTCTTC 3 cut(s) 246, 1484, 2094
EciI GGCGGA 2 cut(s) 85, 212
Ecl136II GAGCTC 3 cut(s) 1148, 1219, 2585
Eco105I TACGTA 1 cut(s) 1207
Eco130I CCWWGG 4 cut(s) 278, 802, 1376, 1622
Eco24I GRGCYC 5 cut(s) 756, 1150, 1221, 2587, 2893
Eco31I GGTCTC 2 cut(s) 666, 1784
Eco32I GATATC 1 cut(s) 2116
Eco47I GGWCC 8 cut(s) 164, 275, 340, 358, 1063, 1459, 1522, 2540
Eco47III AGCGCT 2 cut(s) 1389, 1541
Eco53kI GAGCTC 3 cut(s) 1148, 1219, 2585
Eco57I CTGAAG 2 cut(s) 2367, 2781
Eco72I CACGTG 1 cut(s) 2842
Eco81I CCTNAGG 2 cut(s) 2340, 2544
Eco88I CYCGRG 2 cut(s) 174, 2130
Eco91I GGTNACC 1 cut(s) 2099
EcoICRI GAGCTC 3 cut(s) 1148, 1219, 2585
EcoNI CCTNNNNNAGG 1 cut(s) 841
EcoO109I RGGNCCY 6 cut(s) 164, 753, 1459, 2084, 2540, 2890
EcoO65I GGTNACC 1 cut(s) 2099
EcoRI GAATTC 2 cut(s) 701, 760
EcoRII CCWGG 9 cut(s) 253, 696, 755, 1152, 1510, 1600, 2601, 2697, 2778
EcoRV GATATC 1 cut(s) 2116
EcoT14I CCWWGG 4 cut(s) 278, 802, 1376, 1622
EcoT38I GRGCYC 5 cut(s) 756, 1150, 1221, 2587, 2893
EgeI GGCGCC 1 cut(s) 2430
EheI GGCGCC 1 cut(s) 2430
ErhI CCWWGG 4 cut(s) 278, 802, 1376, 1622
FaeI CATG 7 cut(s) 82, 569, 1472, 1504, 1721, 1733, 1823
FaqI GGGAC 6 cut(s) 150, 213, 288, 380, 1472, 2200
FatI CATG 7 cut(s) 78, 565, 1468, 1500, 1717, 1729, 1819
FauI CCCGC 5 cut(s) 1575, 2074, 2177, 2577, 2678
FbaI TGATCA 1 cut(s) 28
FblI GTMKAC 1 cut(s) 94
FokI GGATG 5 cut(s) 206, 530, 1994, 2519, 2549
FriOI GRGCYC 5 cut(s) 756, 1150, 1221, 2587, 2893
FspBI CTAG 6 cut(s) 423, 437, 1083, 1623, 2057, 2318
GlaI GCGC 6 cut(s) 650, 857, 1168, 1389, 1541, 2430
GsaI CCCAGC 2 cut(s) 670, 1052
GsuI CTGGAG 3 cut(s) 451, 942, 1538
HaeII RGCGCY 3 cut(s) 1391, 1543, 2432
HapII CCGG 5 cut(s) 105, 314, 487, 1061, 1668
HgaI GACGC 2 cut(s) 377, 1586
HhaI GCGC 6 cut(s) 651, 858, 1169, 1390, 1542, 2431
Hin1I GRCGYC 3 cut(s) 97, 2429, 2677
Hin1II CATG 7 cut(s) 82, 569, 1472, 1504, 1721, 1733, 1823
Hin6I GCGC 6 cut(s) 649, 856, 1167, 1388, 1540, 2429
HinP1I GCGC 6 cut(s) 649, 856, 1167, 1388, 1540, 2429
HpaII CCGG 5 cut(s) 105, 314, 487, 1061, 1668
HphI GGTGA 6 cut(s) 155, 269, 373, 2083, 2111, 2321
Hpy166II GTNNAC 5 cut(s) 95, 1270, 1356, 1450, 2395
Hpy8I GTNNAC 5 cut(s) 95, 1270, 1356, 1450, 2395
Hpy99I CGWCG 5 cut(s) 936, 1167, 1792, 2267, 2679
HpyAV CCTTC 5 cut(s) 1593, 2342, 2454, 2505, 2602
HpyCH4III ACNGT 6 cut(s) 307, 1454, 2191, 2222, 2263, 2309
HpyCH4IV ACGT 6 cut(s) 97, 1206, 1770, 2106, 2677, 2841
HpySE526I ACGT 6 cut(s) 97, 1206, 1770, 2106, 2677, 2841
Hsp92I GRCGYC 3 cut(s) 97, 2429, 2677
Hsp92II CATG 7 cut(s) 82, 569, 1472, 1504, 1721, 1733, 1823
HspAI GCGC 6 cut(s) 649, 856, 1167, 1388, 1540, 2429
KasI GGCGCC 1 cut(s) 2428
KflI GGGWCCC 1 cut(s) 164
Kpn2I TCCGGA 1 cut(s) 313
Ksp22I TGATCA 1 cut(s) 28
LguI GCTCTTC 1 cut(s) 246
LmnI GCTCC 3 cut(s) 1015, 2299, 2582
Lsp1109I GCAGC 3 cut(s) 2149, 2740, 2840
LweI GCATC 6 cut(s) 14, 184, 387, 631, 1047, 1936
MaeI CTAG 6 cut(s) 423, 437, 1083, 1623, 2057, 2318
MaeII ACGT 6 cut(s) 97, 1206, 1770, 2106, 2677, 2841
MaeIII GTNAC 5 cut(s) 307, 769, 1464, 2099, 2485
MbiI CCGCTC 1 cut(s) 446
MfeI CAATTG 1 cut(s) 2681
MflI RGATCY 1 cut(s) 1828
MhlI GDGCHC 6 cut(s) 756, 1150, 1221, 2233, 2587, 2893
MlsI TGGCCA 1 cut(s) 1747
MluNI TGGCCA 1 cut(s) 1747
Mly113I GGCGCC 1 cut(s) 2429
MlyI GAGTC 7 cut(s) 166, 1357, 1820, 1964, 2583, 2611, 2636
MmeI TCCRAC 2 cut(s) 762, 2460
Mox20I TGGCCA 1 cut(s) 1747
MroI TCCGGA 1 cut(s) 313
MroXI GAANNNNTTC 1 cut(s) 17
MscI TGGCCA 1 cut(s) 1747
Msp20I TGGCCA 1 cut(s) 1747
MspI CCGG 5 cut(s) 105, 314, 487, 1061, 1668
MunI CAATTG 1 cut(s) 2681
Mva1269I GAATGC 3 cut(s) 59, 692, 1923
MvaI CCWGG 9 cut(s) 255, 698, 757, 1154, 1512, 1602, 2603, 2699, 2780
MvnI CGCG 9 cut(s) 371, 651, 1167, 1527, 1570, 1866, 2572, 2690, 2706
NarI GGCGCC 1 cut(s) 2429
NciI CCSGG 1 cut(s) 1669
NlaIII CATG 7 cut(s) 82, 569, 1472, 1504, 1721, 1733, 1823
NmuCI GTSAC 4 cut(s) 307, 769, 1464, 2099
NruI TCGCGA 1 cut(s) 2706
PaeR7I CTCGAG 2 cut(s) 174, 2130
PciSI GCTCTTC 1 cut(s) 246
PcsI WCGNNNNNNNCGW 3 cut(s) 94, 1479, 1594
PctI GAATGC 3 cut(s) 59, 692, 1923
PdmI GAANNNNTTC 1 cut(s) 17
PfoI TCCNGGA 1 cut(s) 696
Ple19I CGATCG 1 cut(s) 1870
PleI GAGTC 7 cut(s) 165, 1356, 1819, 1964, 2582, 2611, 2636
PluTI GGCGCC 1 cut(s) 2432
PmaCI CACGTG 1 cut(s) 2842
PmlI CACGTG 1 cut(s) 2842
PpsI GAGTC 7 cut(s) 165, 1356, 1819, 1964, 2582, 2611, 2636
Ppu21I YACGTR 3 cut(s) 1207, 2107, 2842
PpuMI RGGWCCY 3 cut(s) 164, 1459, 2540
PshAI GACNNNNGTC 1 cut(s) 2261
Psp124BI GAGCTC 3 cut(s) 1150, 1221, 2587
Psp5II RGGWCCY 3 cut(s) 164, 1459, 2540
Psp6I CCWGG 9 cut(s) 253, 696, 755, 1152, 1510, 1600, 2601, 2697, 2778
PspCI CACGTG 1 cut(s) 2842
PspEI GGTNACC 1 cut(s) 2099
PspFI CCCAGC 2 cut(s) 666, 1048
PspGI CCWGG 9 cut(s) 253, 696, 755, 1152, 1510, 1600, 2601, 2697, 2778
PspOMI GGGCCC 2 cut(s) 752, 2889
PspPPI RGGWCCY 3 cut(s) 164, 1459, 2540
PstI CTGCAG 1 cut(s) 1558
PstNI CAGNNNCTG 1 cut(s) 1658
PsuI RGATCY 1 cut(s) 1828
PvuI CGATCG 1 cut(s) 1870
RruI TCGCGA 1 cut(s) 2706
RsaI GTAC 5 cut(s) 1043, 1269, 2109, 2149, 2523
RsaNI GTAC 5 cut(s) 1042, 1268, 2108, 2148, 2522
SacI GAGCTC 3 cut(s) 1150, 1221, 2587
SapI GCTCTTC 1 cut(s) 246
SchI GAGTC 7 cut(s) 166, 1357, 1820, 1964, 2583, 2611, 2636
SduI GDGCHC 6 cut(s) 756, 1150, 1221, 2233, 2587, 2893
SfaNI GCATC 6 cut(s) 14, 184, 387, 631, 1047, 1936
SfcI CTRYAG 2 cut(s) 198, 1554
SfiI GGCCNNNNNGGCC 1 cut(s) 2807
SfoI GGCGCC 1 cut(s) 2430
Sfr274I CTCGAG 2 cut(s) 174, 2130
SinI GGWCC 8 cut(s) 164, 275, 340, 358, 1063, 1459, 1522, 2540
SlaI CTCGAG 2 cut(s) 174, 2130
SmlI CTYRAG 4 cut(s) 174, 1535, 2130, 2712
SmoI CTYRAG 4 cut(s) 174, 1535, 2130, 2712
SnaBI TACGTA 1 cut(s) 1207
SspDI GGCGCC 1 cut(s) 2428
SspMI CTAG 6 cut(s) 423, 437, 1083, 1623, 2057, 2318
SstI GAGCTC 3 cut(s) 1150, 1221, 2587
StyI CCWWGG 4 cut(s) 278, 802, 1376, 1622
TaaI ACNGT 6 cut(s) 307, 1454, 2191, 2222, 2263, 2309
TaiI ACGT 6 cut(s) 100, 1209, 1773, 2109, 2680, 2844
TaqII GACCGA 1 cut(s) 375
TatI WGTACW 1 cut(s) 1041
TscAI CASTG 7 cut(s) 52, 778, 1277, 1332, 1452, 1755, 1849
TseFI GTSAC 4 cut(s) 307, 769, 1464, 2099
TseI GCWGC 3 cut(s) 2162, 2753, 2828
Tsp45I GTSAC 4 cut(s) 307, 769, 1464, 2099
TspDTI ATGAA 8 cut(s) 54, 1737, 1839, 1920, 1998, 2388, 2670, 2757
TspGWI ACGGA 2 cut(s) 920, 1776
TspRI CASTG 7 cut(s) 52, 778, 1277, 1332, 1452, 1755, 1849
VpaK11BI GGWCC 8 cut(s) 164, 275, 340, 358, 1063, 1459, 1522, 2540
XagI CCTNNNNNAGG 1 cut(s) 841
XapI RAATTY 6 cut(s) 701, 716, 760, 912, 1891, 2387
XcmI CCANNNNNNNNNTGG 1 cut(s) 1177
XhoI CTCGAG 2 cut(s) 174, 2130
XmaJI CCTAGG 1 cut(s) 1622
XmiI GTMKAC 1 cut(s) 94
XmnI GAANNNNTTC 1 cut(s) 17
XspI CTAG 6 cut(s) 423, 437, 1083, 1623, 2057, 2318
ZraI GACGTC 2 cut(s) 98, 2678
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.