Rmu_sc0020146.1_g000003

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0020146.1
OG0000214
Physical Location & Seq
Forward (+)
10119 .. 11959
1841 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0020146.1_g000003.1.cds

Sequence Viewer

Length: 1044 bp
atgtcatatgacgaactcttcgccctgatctttcgtggcatgagtagtcctggtccggaggaccgaagaactacctggagcaggacaacctctgttcaggccgagaaacaaaaggcaatagcaaaggagactcctgagggagagtcttctcatgatgaggatcccgctgaggccactgctgtcttcgctcgcaagcccgatcgagctcaatttgtcgaagagagttttgaagatgacgaacctctgggaatccgattggtccgtcagaggatcactgatctctctcgcctgagcgaggctagatcctcagccgctgcagaagagccaactctttcgctagttcaagcatcaactagcctcgtggcgcctcttccctctcccacatctacaaagcatccgcaaggtcctaccattctaataacgttctccgatgatgactccccggagcatgaaagcgtggaaagccactctgaggcttctgccgcttatgaggaactaatgacgacagagattcccgcggtactagaggtccaagaggtgaatgaagcggggcctcttcctcttggtgaccatgtaccagatatcgacccgacaactcgagaggattctgtttgtaccgaggaggtggtctctgatgccgaagatctggccggtgagacgtacatcctaggtttgggggatgagccgagcagtggtggtctcttgatttcggaaatagacgaggcgagcgttgaggccgaaggttatgctcttctccaacactctactgatgaacctcgcattaaatttccagagtctcccgcagctgagatgtcggaccaagctcagggtcagatggagactcttcgcggcaccttgaatgatcagaccactcacatgggggagataaggctccagaagttagacttagaagcccagatccgacatttccaagctcatttggcccatgtgaacaacgagctcaacgcggaggaagcccaactggacgcttccttggctgcctccgaagaattgactcgccgcttggcccaagctgaagaatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

347

Amino Acids

37.86

Weight (kDa)

4.31

Isoelectric Point (pI)

58.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000214)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0079611
rosa_multiflora Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha Rh3DG208400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 364, 851
AccII CGCG 3 cut(s) 518, 849, 968
AccIII TCCGGA 1 cut(s) 55
AclI AACGTT 1 cut(s) 422
AclWI GGATC 5 cut(s) 155, 168, 278, 297, 913
AcoI YGGCCR 1 cut(s) 648
AcsI RAATTY 1 cut(s) 785
AcyI GRCGYC 1 cut(s) 365
AfaI GTAC 4 cut(s) 522, 576, 616, 662
AfiI CCNNNNNNNGG 6 cut(s) 81, 295, 472, 673, 692, 826
AgsI TTSAA 3 cut(s) 230, 344, 859
AjnI CCWGG 2 cut(s) 49, 74
AluBI AGCT 6 cut(s) 206, 806, 824, 935, 961, 1034
AluI AGCT 6 cut(s) 206, 806, 824, 935, 961, 1034
Alw21I GWGCWC 2 cut(s) 208, 963
Alw26I GTCTC 6 cut(s) 122, 634, 650, 704, 801, 833
AlwI GGATC 5 cut(s) 155, 168, 278, 297, 913
AlwNI CAGNNNCTG 1 cut(s) 314
Ama87I CYCGRG 1 cut(s) 597
Aor13HI TCCGGA 1 cut(s) 55
AoxI GGCC 7 cut(s) 99, 171, 551, 648, 735, 942, 1026
ApeKI GCWGC 3 cut(s) 314, 803, 998
ApoI RAATTY 1 cut(s) 785
ArsI GACNNNNNNTTYG 1 cut(s) 34
AspA2I CCTAGG 1 cut(s) 667
AspLEI GCGC 1 cut(s) 367
AspS9I GGNCC 9 cut(s) 53, 61, 259, 404, 529, 551, 817, 943, 1027
AsuC2I CCSGG 1 cut(s) 443
AsuHPI GGTGA 3 cut(s) 550, 578, 665
AvaI CYCGRG 1 cut(s) 597
AvaII GGWCC 6 cut(s) 53, 61, 259, 404, 529, 817
AvrII CCTAGG 1 cut(s) 667
AxyI CCTNAGG 1 cut(s) 135
BamHI GGATCC 1 cut(s) 160
BanI GGYRCC 2 cut(s) 364, 851
BanII GRGCYC 2 cut(s) 208, 963
BauI CACGAG 1 cut(s) 359
BbsI GAAGAC 2 cut(s) 138, 175
Bbv12I GWGCWC 2 cut(s) 208, 963
BbvCI CCTCAGC 2 cut(s) 168, 307
BbvI GCAGC 3 cut(s) 301, 815, 985
BccI CCATC 1 cut(s) 829
BcgI CGANNNNNNTGC 2 cut(s) 728, 762
BciT130I CCWGG 2 cut(s) 51, 76
BclI TGATCA 1 cut(s) 862
BcnI CCSGG 1 cut(s) 443
BcoDI GTCTC 6 cut(s) 122, 634, 650, 704, 801, 833
BfaI CTAG 5 cut(s) 300, 338, 354, 524, 668
BfmI CTRYAG 1 cut(s) 315
BfoI RGCGCY 1 cut(s) 368
BglII AGATCT 1 cut(s) 643
BisI GCNGC 7 cut(s) 312, 315, 483, 804, 850, 999, 1021
BlnI CCTAGG 1 cut(s) 667
BlsI GCNGC 7 cut(s) 313, 316, 484, 805, 851, 1000, 1022
Bme1390I CCNGG 3 cut(s) 51, 76, 443
Bme18I GGWCC 6 cut(s) 53, 61, 259, 404, 529, 817
BmeT110I CYCGRG 1 cut(s) 597
BmgT120I GGNCC 9 cut(s) 53, 61, 259, 404, 529, 551, 817, 943, 1027
BmiI GGNNCC 5 cut(s) 162, 366, 552, 853, 893
BmrFI CCNGG 3 cut(s) 51, 76, 443
BmsI GCATC 3 cut(s) 356, 403, 625
BpiI GAAGAC 2 cut(s) 138, 175
BplI GAGNNNNNCTC 2 cut(s) 614, 646
BpmI CTGGAG 2 cut(s) 97, 878
Bpu10I CCTNAGC 4 cut(s) 168, 290, 307, 825
BpuMI CCSGG 1 cut(s) 443
BsaBI GATNNNNATC 1 cut(s) 159
BsaHI GRCGYC 1 cut(s) 365
BsaI GGTCTC 2 cut(s) 634, 704
BsaJI CCNNGG 5 cut(s) 441, 516, 618, 667, 993
BsaWI WCCGGW 1 cut(s) 55
Bsc4I CCNNNNNNNGG 6 cut(s) 81, 295, 472, 673, 692, 826
Bse118I RCCGGY 1 cut(s) 650
Bse1I ACTGG 1 cut(s) 987
Bse21I CCTNAGG 1 cut(s) 135
Bse8I GATNNNNATC 1 cut(s) 159
BseAI TCCGGA 1 cut(s) 55
BseBI CCWGG 2 cut(s) 51, 76
BseDI CCNNGG 5 cut(s) 441, 516, 618, 667, 993
BseGI GGATG 3 cut(s) 394, 663, 685
BseJI GATNNNNATC 1 cut(s) 159
BseLI CCNNNNNNNGG 6 cut(s) 81, 295, 472, 673, 692, 826
BseMII CTCAG 7 cut(s) 126, 159, 281, 321, 462, 798, 839
BseNI ACTGG 1 cut(s) 987
BseRI GAGGAG 1 cut(s) 635
BseXI GCAGC 3 cut(s) 301, 815, 985
Bsh1236I CGCG 3 cut(s) 518, 849, 968
Bsh1285I CGRYCG 1 cut(s) 202
BshFI GGCC 7 cut(s) 101, 173, 553, 650, 737, 944, 1028
BshNI GGYRCC 2 cut(s) 364, 851
BsiEI CGRYCG 1 cut(s) 202
BsiHKAI GWGCWC 2 cut(s) 208, 963
BsiHKCI CYCGRG 1 cut(s) 597
BsiSI CCGG 3 cut(s) 56, 443, 651
BslI CCNNNNNNNGG 6 cut(s) 81, 295, 472, 673, 692, 826
BsmAI GTCTC 6 cut(s) 122, 634, 650, 704, 801, 833
BsmBI CGTCTC 1 cut(s) 650
BsnI GGCC 7 cut(s) 101, 173, 553, 650, 737, 944, 1028
Bso31I GGTCTC 2 cut(s) 634, 704
BsoBI CYCGRG 1 cut(s) 597
Bsp1286I GDGCHC 2 cut(s) 208, 963
Bsp13I TCCGGA 1 cut(s) 55
Bsp143I GATC 9 cut(s) 27, 160, 199, 270, 277, 302, 643, 862, 918
BspANI GGCC 7 cut(s) 101, 173, 553, 650, 737, 944, 1028
BspCNI CTCAG 7 cut(s) 127, 160, 282, 320, 463, 799, 838
BspEI TCCGGA 1 cut(s) 55
BspFNI CGCG 3 cut(s) 518, 849, 968
BspHI TCATGA 1 cut(s) 151
BspLI GGNNCC 5 cut(s) 162, 366, 552, 853, 893
BspMAI CTGCAG 1 cut(s) 319
BspPI GGATC 5 cut(s) 155, 168, 278, 297, 913
BspQI GCTCTTC 2 cut(s) 315, 756
BspT107I GGYRCC 2 cut(s) 364, 851
BspTNI GGTCTC 2 cut(s) 634, 704
BsrFI RCCGGY 1 cut(s) 650
BsrI ACTGG 1 cut(s) 987
BssAI RCCGGY 1 cut(s) 650
BssECI CCNNGG 5 cut(s) 441, 516, 618, 667, 993
BssMI GATC 9 cut(s) 27, 160, 199, 270, 277, 302, 643, 862, 918
BssNI GRCGYC 1 cut(s) 365
BssSI CACGAG 1 cut(s) 359
BssT1I CCWWGG 2 cut(s) 667, 993
Bst2BI CACGAG 1 cut(s) 359
Bst2UI CCWGG 2 cut(s) 51, 76
Bst6I CTCTTC 7 cut(s) 23, 213, 315, 375, 561, 756, 849
BstACI GRCGYC 1 cut(s) 365
BstC8I GCNNGC 3 cut(s) 190, 194, 727
BstDEI CTNAG 8 cut(s) 135, 168, 290, 307, 471, 807, 825, 907
BstDSI CCRYGG 1 cut(s) 516
BstEII GGTNACC 1 cut(s) 566
BstENI CCTNNNNNAGG 2 cut(s) 79, 293
BstF5I GGATG 3 cut(s) 394, 663, 685
BstFNI CGCG 3 cut(s) 518, 849, 968
BstH2I RGCGCY 1 cut(s) 368
BstHHI GCGC 1 cut(s) 367
BstKTI GATC 9 cut(s) 30, 163, 202, 273, 280, 305, 646, 865, 921
BstMAI GTCTC 6 cut(s) 122, 634, 650, 704, 801, 833
BstMBI GATC 9 cut(s) 27, 160, 199, 270, 277, 302, 643, 862, 918
BstMCI CGRYCG 1 cut(s) 202
BstMWI GCNNNNNNNGC 6 cut(s) 185, 462, 482, 941, 974, 995
BstNI CCWGG 2 cut(s) 51, 76
BstPI GGTNACC 1 cut(s) 566
BstSCI CCNGG 3 cut(s) 49, 74, 441
BstSFI CTRYAG 1 cut(s) 315
BstUI CGCG 3 cut(s) 518, 849, 968
BstV1I GCAGC 3 cut(s) 301, 815, 985
BstV2I GAAGAC 2 cut(s) 138, 175
BstX2I RGATCY 4 cut(s) 160, 302, 643, 918
BstXI CCANNNNNNTGG 1 cut(s) 877
BstYI RGATCY 4 cut(s) 160, 302, 643, 918
Bsu36I CCTNAGG 1 cut(s) 135
BsuRI GGCC 7 cut(s) 101, 173, 553, 650, 737, 944, 1028
BtgI CCRYGG 1 cut(s) 516
BtsCI GGATG 3 cut(s) 394, 663, 685
BtsI GCAGTG 2 cut(s) 174, 697
BtsIMutI CAGTG 3 cut(s) 174, 273, 697
Cac8I GCNNGC 3 cut(s) 190, 194, 727
CaiI CAGNNNCTG 1 cut(s) 314
CciI TCATGA 1 cut(s) 151
CfoI GCGC 1 cut(s) 367
Cfr10I RCCGGY 1 cut(s) 650
Cfr13I GGNCC 9 cut(s) 53, 61, 259, 404, 529, 551, 817, 943, 1027
Cfr42I CCGCGG 1 cut(s) 519
CseI GACGC 1 cut(s) 995
Csp6I GTAC 4 cut(s) 521, 575, 615, 661
CviAII CATG 6 cut(s) 40, 152, 449, 572, 877, 947
CviQI GTAC 4 cut(s) 521, 575, 615, 661
DdeI CTNAG 8 cut(s) 135, 168, 290, 307, 471, 807, 825, 907
DinI GGCGCC 1 cut(s) 366
DpnI GATC 9 cut(s) 29, 162, 201, 272, 279, 304, 645, 864, 920
DpnII GATC 9 cut(s) 27, 160, 199, 270, 277, 302, 643, 862, 918
EaeI YGGCCR 1 cut(s) 648
Eam1104I CTCTTC 7 cut(s) 23, 213, 315, 375, 561, 756, 849
EarI CTCTTC 7 cut(s) 23, 213, 315, 375, 561, 756, 849
Ecl136II GAGCTC 2 cut(s) 206, 961
Eco130I CCWWGG 2 cut(s) 667, 993
Eco24I GRGCYC 2 cut(s) 208, 963
Eco31I GGTCTC 2 cut(s) 634, 704
Eco32I GATATC 1 cut(s) 583
Eco47I GGWCC 6 cut(s) 53, 61, 259, 404, 529, 817
Eco53kI GAGCTC 2 cut(s) 206, 961
Eco81I CCTNAGG 1 cut(s) 135
Eco88I CYCGRG 1 cut(s) 597
Eco91I GGTNACC 1 cut(s) 566
EcoICRI GAGCTC 2 cut(s) 206, 961
EcoNI CCTNNNNNAGG 2 cut(s) 79, 293
EcoO109I RGGNCCY 2 cut(s) 404, 551
EcoO65I GGTNACC 1 cut(s) 566
EcoRII CCWGG 2 cut(s) 49, 74
EcoRV GATATC 1 cut(s) 583
EcoT14I CCWWGG 2 cut(s) 667, 993
EcoT38I GRGCYC 2 cut(s) 208, 963
EgeI GGCGCC 1 cut(s) 366
EheI GGCGCC 1 cut(s) 366
ErhI CCWWGG 2 cut(s) 667, 993
Esp3I CGTCTC 1 cut(s) 650
FaeI CATG 6 cut(s) 43, 155, 452, 575, 880, 950
FalI AAGNNNNNCTT 2 cut(s) 890, 922
FatI CATG 6 cut(s) 39, 151, 448, 571, 876, 946
FauI CCCGC 4 cut(s) 172, 523, 541, 808
FauNDI CATATG 1 cut(s) 7
FbaI TGATCA 1 cut(s) 862
Fnu4HI GCNGC 7 cut(s) 312, 315, 483, 804, 850, 999, 1021
FokI GGATG 3 cut(s) 381, 650, 692
FriOI GRGCYC 2 cut(s) 208, 963
Fsp4HI GCNGC 7 cut(s) 312, 315, 483, 804, 850, 999, 1021
FspBI CTAG 5 cut(s) 300, 338, 354, 524, 668
GlaI GCGC 1 cut(s) 366
GluI GCNGC 7 cut(s) 312, 315, 483, 804, 850, 999, 1021
GsuI CTGGAG 2 cut(s) 97, 878
HaeII RGCGCY 1 cut(s) 368
HaeIII GGCC 7 cut(s) 101, 173, 553, 650, 737, 944, 1028
HapII CCGG 3 cut(s) 56, 443, 651
HgaI GACGC 1 cut(s) 995
HhaI GCGC 1 cut(s) 367
Hin1I GRCGYC 1 cut(s) 365
Hin1II CATG 6 cut(s) 43, 155, 452, 575, 880, 950
Hin6I GCGC 1 cut(s) 365
HinP1I GCGC 1 cut(s) 365
HinfI GANTC 9 cut(s) 130, 143, 249, 437, 511, 605, 794, 841, 1015
HpaII CCGG 3 cut(s) 56, 443, 651
HphI GGTGA 3 cut(s) 550, 578, 665
Hpy166II GTNNAC 1 cut(s) 952
Hpy188III TCNNGA 7 cut(s) 56, 134, 152, 599, 703, 791, 895
Hpy8I GTNNAC 1 cut(s) 952
HpyAV CCTTC 1 cut(s) 734
HpyCH4IV ACGT 2 cut(s) 422, 659
HpyCH4V TGCA 1 cut(s) 317
HpyF10VI GCNNNNNNNGC 6 cut(s) 185, 462, 482, 941, 974, 995
HpyF3I CTNAG 8 cut(s) 135, 168, 290, 307, 471, 807, 825, 907
HpySE526I ACGT 2 cut(s) 422, 659
Hsp92I GRCGYC 1 cut(s) 365
Hsp92II CATG 6 cut(s) 43, 155, 452, 575, 880, 950
HspAI GCGC 1 cut(s) 365
KasI GGCGCC 1 cut(s) 364
Kpn2I TCCGGA 1 cut(s) 55
Ksp22I TGATCA 1 cut(s) 862
KspI CCGCGG 1 cut(s) 519
Kzo9I GATC 9 cut(s) 27, 160, 199, 270, 277, 302, 643, 862, 918
LguI GCTCTTC 2 cut(s) 315, 756
LmnI GCTCC 3 cut(s) 78, 445, 897
Lsp1109I GCAGC 3 cut(s) 301, 815, 985
LweI GCATC 3 cut(s) 356, 403, 625
MaeI CTAG 5 cut(s) 300, 338, 354, 524, 668
MaeII ACGT 2 cut(s) 422, 659
MaeIII GTNAC 1 cut(s) 566
MalI GATC 9 cut(s) 29, 162, 201, 272, 279, 304, 645, 864, 920
MboI GATC 9 cut(s) 27, 160, 199, 270, 277, 302, 643, 862, 918
MflI RGATCY 4 cut(s) 160, 302, 643, 918
MhlI GDGCHC 2 cut(s) 208, 963
MluCI AATT 3 cut(s) 209, 785, 1010
Mly113I GGCGCC 1 cut(s) 365
MlyI GAGTC 6 cut(s) 124, 152, 431, 803, 835, 1009
MmeI TCCRAC 3 cut(s) 781, 795, 946
MroI TCCGGA 1 cut(s) 55
MseI TTAA 1 cut(s) 783
MslI CAYNNNNRTG 1 cut(s) 875
MspA1I CMGCKG 4 cut(s) 167, 314, 518, 806
MspI CCGG 3 cut(s) 56, 443, 651
MspR9I CCNGG 3 cut(s) 51, 76, 443
MvaI CCWGG 2 cut(s) 51, 76
MvnI CGCG 3 cut(s) 518, 849, 968
MwoI GCNNNNNNNGC 6 cut(s) 185, 462, 482, 941, 974, 995
NarI GGCGCC 1 cut(s) 365
NciI CCSGG 1 cut(s) 443
NdeI CATATG 1 cut(s) 7
NdeII GATC 9 cut(s) 27, 160, 199, 270, 277, 302, 643, 862, 918
NlaIII CATG 6 cut(s) 43, 155, 452, 575, 880, 950
NlaIV GGNNCC 5 cut(s) 162, 366, 552, 853, 893
NmeAIII GCCGAG 2 cut(s) 127, 711
NmuCI GTSAC 1 cut(s) 566
PaeR7I CTCGAG 1 cut(s) 597
PagI TCATGA 1 cut(s) 151
PciSI GCTCTTC 2 cut(s) 315, 756
PcsI WCGNNNNNNNCGW 1 cut(s) 726
PfeI GAWTC 3 cut(s) 249, 511, 605
PkrI GCNGC 7 cut(s) 313, 316, 484, 805, 851, 1000, 1022
Ple19I CGATCG 1 cut(s) 202
PleI GAGTC 6 cut(s) 124, 151, 431, 802, 835, 1009
PluTI GGCGCC 1 cut(s) 368
PpsI GAGTC 6 cut(s) 124, 151, 431, 802, 835, 1009
PpuMI RGGWCCY 1 cut(s) 404
Psp124BI GAGCTC 2 cut(s) 208, 963
Psp1406I AACGTT 1 cut(s) 422
Psp5II RGGWCCY 1 cut(s) 404
Psp6I CCWGG 2 cut(s) 49, 74
PspEI GGTNACC 1 cut(s) 566
PspGI CCWGG 2 cut(s) 49, 74
PspN4I GGNNCC 5 cut(s) 162, 366, 552, 853, 893
PspPI GGNCC 9 cut(s) 53, 61, 259, 404, 529, 551, 817, 943, 1027
PspPPI RGGWCCY 1 cut(s) 404
PstI CTGCAG 1 cut(s) 319
PstNI CAGNNNCTG 1 cut(s) 314
PsuI RGATCY 4 cut(s) 160, 302, 643, 918
PvuI CGATCG 1 cut(s) 202
PvuII CAGCTG 1 cut(s) 806
RsaI GTAC 4 cut(s) 522, 576, 616, 662
RsaNI GTAC 4 cut(s) 521, 575, 615, 661
RseI CAYNNNNRTG 1 cut(s) 875
SacI GAGCTC 2 cut(s) 208, 963
SacII CCGCGG 1 cut(s) 519
SapI GCTCTTC 2 cut(s) 315, 756
SaqAI TTAA 1 cut(s) 783
SatI GCNGC 7 cut(s) 312, 315, 483, 804, 850, 999, 1021
Sau3AI GATC 9 cut(s) 27, 160, 199, 270, 277, 302, 643, 862, 918
Sau96I GGNCC 9 cut(s) 53, 61, 259, 404, 529, 551, 817, 943, 1027
SchI GAGTC 6 cut(s) 124, 152, 431, 803, 835, 1009
ScrFI CCNGG 3 cut(s) 51, 76, 443
SduI GDGCHC 2 cut(s) 208, 963
SfaNI GCATC 3 cut(s) 356, 403, 625
SfcI CTRYAG 1 cut(s) 315
SfoI GGCGCC 1 cut(s) 366
Sfr274I CTCGAG 1 cut(s) 597
Sfr303I CCGCGG 1 cut(s) 519
SgrBI CCGCGG 1 cut(s) 519
SinI GGWCC 6 cut(s) 53, 61, 259, 404, 529, 817
SlaI CTCGAG 1 cut(s) 597
SmiMI CAYNNNNRTG 1 cut(s) 875
SmlI CTYRAG 1 cut(s) 597
SmoI CTYRAG 1 cut(s) 597
Sse9I AATT 3 cut(s) 209, 785, 1010
SspDI GGCGCC 1 cut(s) 364
SspMI CTAG 5 cut(s) 300, 338, 354, 524, 668
SstI GAGCTC 2 cut(s) 208, 963
StyD4I CCNGG 3 cut(s) 49, 74, 441
StyI CCWWGG 2 cut(s) 667, 993
TaiI ACGT 2 cut(s) 425, 662
TaqI TCGA 4 cut(s) 202, 216, 585, 598
TaqII GACCGA 1 cut(s) 78
TasI AATT 3 cut(s) 209, 785, 1010
TauI GCSGC 4 cut(s) 314, 485, 852, 1023
TfiI GAWTC 3 cut(s) 249, 511, 605
Tru1I TTAA 1 cut(s) 783
Tru9I TTAA 1 cut(s) 783
TscAI CASTG 3 cut(s) 181, 280, 697
TseFI GTSAC 1 cut(s) 566
TseI GCWGC 3 cut(s) 314, 803, 998
Tsp45I GTSAC 1 cut(s) 566
TspDTI ATGAA 3 cut(s) 465, 558, 786
TspGWI ACGGA 1 cut(s) 251
TspRI CASTG 3 cut(s) 181, 280, 697
VpaK11BI GGWCC 6 cut(s) 53, 61, 259, 404, 529, 817
XagI CCTNNNNNAGG 2 cut(s) 79, 293
XapI RAATTY 1 cut(s) 785
XhoI CTCGAG 1 cut(s) 597
XmaJI CCTAGG 1 cut(s) 667
XspI CTAG 5 cut(s) 300, 338, 354, 524, 668
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.