Rmu_ssc0000438.1_g000003

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000438.1
OG0000214
Physical Location & Seq
Forward (+)
12122 .. 13072
951 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000438.1_g000003.1.cds

Sequence Viewer

Length: 951 bp
ctgctctctgacatttctgaacctgaccaggattctgtttgtaccaaggaggtggctgcaaatgctgctggtcttatcggcgggacagtcgccttagagatggaaaatgatactaacggtggtggtgccccccaagtctcgcgaacaaatgagacaaccgtcgaagctgagggctctgtgcttgaatctgctccacttacccatggcgagccgcgagttgagtttccagattcccctgaggctgaagggaccgaccaacctattgaagatgaagaaactgaggaagctgtccacccttttgcattgggggttcgtgatcctgtggcgcccctgccgcctcctcctcctaccagattcgagagattgatgagggtgttagaggtaactcctccttctgctgtggttgaggctaaaatggtgcttcgcgaacatctgggtcctcaggtattggagactgacattctcccgcgagtcttagaagccctaaggtatctttgccaggaaaaggtattgaccctgcagcaacttagtgctattgatgatctgttgaatgaacttgatatggcccgccgacgtcaatcggccgcgaacacccaggctcgagatgctcaagaggctttgaatagtgtctctcgagaaatggacatctcccgcgatattttaaatgaaccatccatccgcctgcgggaactacaaatccaaaggtccgacttcaaacttcaaatcgaggacctccaagcccatttagcctttgttgagaatgcgattgttgcagaagaaactcaactcgatgagcctttggctgcttctaaagaaatgggccgcaacctggcccgtatcagagatcgggccactcaggccgaagctggtgccattgcggcgaaacgccacgtggaggaactttgtttgaaattgagctttgcaggccaatgtttggaggccccctcataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

316

Amino Acids

34.57

Weight (kDa)

4.51

Isoelectric Point (pI)

52.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000214)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0079611
rosa_multiflora Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha Rh3DG208400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 577
AccB1I GGYRCC 3 cut(s) 125, 325, 869
AccB7I CCANNNNNTGG 1 cut(s) 934
AccII CGCG 6 cut(s) 142, 214, 426, 469, 587, 654
AclWI GGATC 1 cut(s) 311
AcoI YGGCCR 1 cut(s) 582
AcuI CTGAAG 1 cut(s) 264
AcvI CACGTG 1 cut(s) 892
AcyI GRCGYC 2 cut(s) 326, 574
AfaI GTAC 1 cut(s) 43
AfiI CCNNNNNNNGG 5 cut(s) 505, 685, 829, 895, 934
AgsI TTSAA 7 cut(s) 185, 266, 550, 622, 715, 722, 910
AjnI CCWGG 4 cut(s) 27, 498, 594, 828
AloI GAACNNNNNNTCC 4 cut(s) 660, 681, 692, 713
AluBI AGCT 4 cut(s) 167, 287, 866, 918
AluI AGCT 4 cut(s) 167, 287, 866, 918
Alw26I GTCTC 4 cut(s) 142, 146, 446, 634
AlwI GGATC 1 cut(s) 311
Ama87I CYCGRG 2 cut(s) 600, 633
AoxI GGCC 8 cut(s) 564, 582, 820, 831, 849, 858, 925, 939
ApeKI GCWGC 4 cut(s) 56, 65, 520, 803
AspLEI GCGC 1 cut(s) 328
AspS9I GGNCC 9 cut(s) 249, 437, 565, 705, 730, 820, 832, 849, 940
AvaI CYCGRG 2 cut(s) 600, 633
AvaII GGWCC 4 cut(s) 249, 437, 705, 730
AxyI CCTNAGG 3 cut(s) 237, 441, 485
BaeGI GKGCMC 1 cut(s) 130
BanI GGYRCC 3 cut(s) 125, 325, 869
BanII GRGCYC 1 cut(s) 176
BbrPI CACGTG 1 cut(s) 892
BbvCI CCTCAGC 1 cut(s) 168
BbvI GCAGC 4 cut(s) 43, 52, 532, 790
BccI CCATC 3 cut(s) 94, 679, 683
BcgI CGANNNNNNTGC 2 cut(s) 851, 885
BciT130I CCWGG 4 cut(s) 29, 500, 596, 830
BcoDI GTCTC 4 cut(s) 142, 146, 446, 634
BfmI CTRYAG 1 cut(s) 518
BfoI RGCGCY 1 cut(s) 329
BglI GCCNNNNNGGC 2 cut(s) 857, 878
BisI GCNGC 9 cut(s) 57, 66, 212, 335, 521, 585, 804, 823, 879
BlsI GCNGC 9 cut(s) 58, 67, 213, 336, 522, 586, 805, 824, 880
Bme1390I CCNGG 4 cut(s) 29, 500, 596, 830
Bme18I GGWCC 4 cut(s) 249, 437, 705, 730
BmeT110I CYCGRG 2 cut(s) 600, 633
BmgT120I GGNCC 9 cut(s) 249, 437, 565, 705, 730, 820, 832, 849, 940
BmiI GGNNCC 6 cut(s) 127, 250, 327, 438, 871, 942
BmrFI CCNGG 4 cut(s) 29, 500, 596, 830
BmsI GCATC 1 cut(s) 595
BoxI GACNNNNGTC 1 cut(s) 158
BplI GAGNNNNNCTC 1 cut(s) 929
Bpu10I CCTNAGC 1 cut(s) 168
BpuEI CTTGAG 1 cut(s) 594
BsaAI YACGTR 1 cut(s) 892
BsaHI GRCGYC 2 cut(s) 326, 574
BsaJI CCNNGG 3 cut(s) 45, 202, 594
Bsc4I CCNNNNNNNGG 5 cut(s) 505, 685, 829, 895, 934
Bse21I CCTNAGG 3 cut(s) 237, 441, 485
Bse3DI GCAATG 1 cut(s) 873
BseBI CCWGG 4 cut(s) 29, 500, 596, 830
BseDI CCNNGG 3 cut(s) 45, 202, 594
BseGI GGATG 2 cut(s) 671, 675
BseLI CCNNNNNNNGG 5 cut(s) 505, 685, 829, 895, 934
BseMI GCAATG 1 cut(s) 873
BseMII CTCAG 5 cut(s) 159, 228, 270, 455, 869
BseRI GAGGAG 3 cut(s) 330, 333, 378
BseSI GKGCMC 1 cut(s) 130
BseX3I CGGCCG 1 cut(s) 582
BseXI GCAGC 4 cut(s) 43, 52, 532, 790
Bsh1236I CGCG 6 cut(s) 142, 214, 426, 469, 587, 654
Bsh1285I CGRYCG 1 cut(s) 585
BshFI GGCC 8 cut(s) 566, 584, 822, 833, 851, 860, 927, 941
BshNI GGYRCC 3 cut(s) 125, 325, 869
BsiEI CGRYCG 1 cut(s) 585
BsiHKCI CYCGRG 2 cut(s) 600, 633
BslFI GGGAC 2 cut(s) 97, 262
BslI CCNNNNNNNGG 5 cut(s) 505, 685, 829, 895, 934
BsmAI GTCTC 4 cut(s) 142, 146, 446, 634
BsmFI GGGAC 2 cut(s) 97, 262
BsmI GAATGC 1 cut(s) 766
BsnI GGCC 8 cut(s) 566, 584, 822, 833, 851, 860, 927, 941
BsoBI CYCGRG 2 cut(s) 600, 633
Bsp1286I GDGCHC 2 cut(s) 130, 176
Bsp143I GATC 3 cut(s) 316, 541, 844
Bsp19I CCATGG 1 cut(s) 202
Bsp68I TCGCGA 2 cut(s) 142, 426
BspANI GGCC 8 cut(s) 566, 584, 822, 833, 851, 860, 927, 941
BspCNI CTCAG 5 cut(s) 160, 229, 271, 454, 868
BspFNI CGCG 6 cut(s) 142, 214, 426, 469, 587, 654
BspLI GGNNCC 6 cut(s) 127, 250, 327, 438, 871, 942
BspMAI CTGCAG 1 cut(s) 522
BspPI GGATC 1 cut(s) 311
BspT107I GGYRCC 3 cut(s) 125, 325, 869
BsrDI GCAATG 1 cut(s) 873
BssECI CCNNGG 3 cut(s) 45, 202, 594
BssMI GATC 3 cut(s) 316, 541, 844
BssNI GRCGYC 2 cut(s) 326, 574
BssT1I CCWWGG 2 cut(s) 45, 202
Bst2UI CCWGG 4 cut(s) 29, 500, 596, 830
Bst4CI ACNGT 3 cut(s) 88, 119, 160
BstACI GRCGYC 2 cut(s) 326, 574
BstAPI GCANNNNNTGC 1 cut(s) 65
BstBAI YACGTR 1 cut(s) 892
BstC8I GCNNGC 4 cut(s) 209, 568, 683, 925
BstDEI CTNAG 9 cut(s) 94, 168, 237, 279, 441, 475, 485, 527, 855
BstDSI CCRYGG 1 cut(s) 202
BstF5I GGATG 2 cut(s) 671, 675
BstFNI CGCG 6 cut(s) 142, 214, 426, 469, 587, 654
BstH2I RGCGCY 1 cut(s) 329
BstHHI GCGC 1 cut(s) 328
BstKTI GATC 3 cut(s) 319, 544, 847
BstMAI GTCTC 4 cut(s) 142, 146, 446, 634
BstMBI GATC 3 cut(s) 316, 541, 844
BstMCI CGRYCG 1 cut(s) 585
BstNI CCWGG 4 cut(s) 29, 500, 596, 830
BstPAI GACNNNNGTC 1 cut(s) 158
BstSCI CCNGG 4 cut(s) 27, 498, 594, 828
BstSFI CTRYAG 1 cut(s) 518
BstSLI GKGCMC 1 cut(s) 130
BstUI CGCG 6 cut(s) 142, 214, 426, 469, 587, 654
BstV1I GCAGC 4 cut(s) 43, 52, 532, 790
BstXI CCANNNNNNTGG 1 cut(s) 52
BstZI CGGCCG 1 cut(s) 582
Bsu36I CCTNAGG 3 cut(s) 237, 441, 485
BsuRI GGCC 8 cut(s) 566, 584, 822, 833, 851, 860, 927, 941
BtgI CCRYGG 1 cut(s) 202
BtsCI GGATG 2 cut(s) 671, 675
BtuMI TCGCGA 2 cut(s) 142, 426
Cac8I GCNNGC 4 cut(s) 209, 568, 683, 925
CfoI GCGC 1 cut(s) 328
Cfr13I GGNCC 9 cut(s) 249, 437, 565, 705, 730, 820, 832, 849, 940
Csp6I GTAC 1 cut(s) 42
CviAII CATG 1 cut(s) 203
CviQI GTAC 1 cut(s) 42
DdeI CTNAG 9 cut(s) 94, 168, 237, 279, 441, 475, 485, 527, 855
DinI GGCGCC 1 cut(s) 327
DpnI GATC 3 cut(s) 318, 543, 846
DpnII GATC 3 cut(s) 316, 541, 844
DraI TTTAAA 1 cut(s) 663
EaeI YGGCCR 1 cut(s) 582
EagI CGGCCG 1 cut(s) 582
EciI GGCGGA 1 cut(s) 668
EclXI CGGCCG 1 cut(s) 582
Eco130I CCWWGG 2 cut(s) 45, 202
Eco24I GRGCYC 1 cut(s) 176
Eco47I GGWCC 4 cut(s) 249, 437, 705, 730
Eco52I CGGCCG 1 cut(s) 582
Eco57I CTGAAG 1 cut(s) 264
Eco72I CACGTG 1 cut(s) 892
Eco81I CCTNAGG 3 cut(s) 237, 441, 485
Eco88I CYCGRG 2 cut(s) 600, 633
EcoO109I RGGNCCY 3 cut(s) 437, 730, 940
EcoRII CCWGG 4 cut(s) 27, 498, 594, 828
EcoT14I CCWWGG 2 cut(s) 45, 202
EcoT38I GRGCYC 1 cut(s) 176
EgeI GGCGCC 1 cut(s) 327
EheI GGCGCC 1 cut(s) 327
ErhI CCWWGG 2 cut(s) 45, 202
FaeI CATG 1 cut(s) 206
FaiI YATR 3 cut(s) 204, 563, 949
FaqI GGGAC 2 cut(s) 97, 262
FatI CATG 1 cut(s) 202
FauI CCCGC 5 cut(s) 74, 474, 575, 659, 678
Fnu4HI GCNGC 9 cut(s) 57, 66, 212, 335, 521, 585, 804, 823, 879
FokI GGATG 2 cut(s) 658, 662
FriOI GRGCYC 1 cut(s) 176
Fsp4HI GCNGC 9 cut(s) 57, 66, 212, 335, 521, 585, 804, 823, 879
GlaI GCGC 1 cut(s) 327
GluI GCNGC 9 cut(s) 57, 66, 212, 335, 521, 585, 804, 823, 879
HaeII RGCGCY 1 cut(s) 329
HaeIII GGCC 8 cut(s) 566, 584, 822, 833, 851, 860, 927, 941
HhaI GCGC 1 cut(s) 328
Hin1I GRCGYC 2 cut(s) 326, 574
Hin1II CATG 1 cut(s) 206
Hin6I GCGC 1 cut(s) 326
HinP1I GCGC 1 cut(s) 326
HinfI GANTC 5 cut(s) 32, 185, 230, 354, 471
Hpy166II GTNNAC 1 cut(s) 292
Hpy188I TCNGA 4 cut(s) 10, 19, 709, 842
Hpy188III TCNNGA 9 cut(s) 141, 227, 314, 358, 425, 602, 611, 633, 635
Hpy8I GTNNAC 1 cut(s) 292
Hpy99I CGWCG 2 cut(s) 164, 576
HpyAV CCTTC 2 cut(s) 239, 402
HpyCH4III ACNGT 3 cut(s) 88, 119, 160
HpyCH4IV ACGT 2 cut(s) 574, 891
HpyCH4V TGCA 5 cut(s) 59, 302, 520, 773, 923
HpyF3I CTNAG 9 cut(s) 94, 168, 237, 279, 441, 475, 485, 527, 855
HpySE526I ACGT 2 cut(s) 574, 891
Hsp92I GRCGYC 2 cut(s) 326, 574
Hsp92II CATG 1 cut(s) 206
HspAI GCGC 1 cut(s) 326
KasI GGCGCC 1 cut(s) 325
Kzo9I GATC 3 cut(s) 316, 541, 844
LmnI GCTCC 1 cut(s) 196
Lsp1109I GCAGC 4 cut(s) 43, 52, 532, 790
LweI GCATC 1 cut(s) 595
MaeII ACGT 2 cut(s) 574, 891
MaeIII GTNAC 1 cut(s) 382
MalI GATC 3 cut(s) 318, 543, 846
MboI GATC 3 cut(s) 316, 541, 844
MboII GAAGA 3 cut(s) 278, 284, 788
MhlI GDGCHC 2 cut(s) 130, 176
MluCI AATT 1 cut(s) 911
Mly113I GGCGCC 1 cut(s) 326
MlyI GAGTC 1 cut(s) 480
MmeI TCCRAC 1 cut(s) 732
MseI TTAA 1 cut(s) 662
MspR9I CCNGG 4 cut(s) 29, 500, 596, 830
Mva1269I GAATGC 1 cut(s) 766
MvaI CCWGG 4 cut(s) 29, 500, 596, 830
MvnI CGCG 6 cut(s) 142, 214, 426, 469, 587, 654
NarI GGCGCC 1 cut(s) 326
NcoI CCATGG 1 cut(s) 202
NdeII GATC 3 cut(s) 316, 541, 844
NlaIII CATG 1 cut(s) 206
NlaIV GGNNCC 6 cut(s) 127, 250, 327, 438, 871, 942
NruI TCGCGA 2 cut(s) 142, 426
PaeR7I CTCGAG 2 cut(s) 600, 633
PctI GAATGC 1 cut(s) 766
PfeI GAWTC 4 cut(s) 32, 185, 230, 354
PflMI CCANNNNNTGG 1 cut(s) 934
PkrI GCNGC 9 cut(s) 58, 67, 213, 336, 522, 586, 805, 824, 880
PleI GAGTC 1 cut(s) 479
PluTI GGCGCC 1 cut(s) 329
PmaCI CACGTG 1 cut(s) 892
PmlI CACGTG 1 cut(s) 892
PpsI GAGTC 1 cut(s) 479
Ppu21I YACGTR 1 cut(s) 892
PpuMI RGGWCCY 2 cut(s) 437, 730
PshAI GACNNNNGTC 1 cut(s) 158
Psp5II RGGWCCY 2 cut(s) 437, 730
Psp6I CCWGG 4 cut(s) 27, 498, 594, 828
PspCI CACGTG 1 cut(s) 892
PspGI CCWGG 4 cut(s) 27, 498, 594, 828
PspN4I GGNNCC 6 cut(s) 127, 250, 327, 438, 871, 942
PspPI GGNCC 9 cut(s) 249, 437, 565, 705, 730, 820, 832, 849, 940
PspPPI RGGWCCY 2 cut(s) 437, 730
PstI CTGCAG 1 cut(s) 522
RruI TCGCGA 2 cut(s) 142, 426
RsaI GTAC 1 cut(s) 43
RsaNI GTAC 1 cut(s) 42
SaqAI TTAA 1 cut(s) 662
SatI GCNGC 9 cut(s) 57, 66, 212, 335, 521, 585, 804, 823, 879
Sau3AI GATC 3 cut(s) 316, 541, 844
Sau96I GGNCC 9 cut(s) 249, 437, 565, 705, 730, 820, 832, 849, 940
SchI GAGTC 1 cut(s) 480
ScrFI CCNGG 4 cut(s) 29, 500, 596, 830
SduI GDGCHC 2 cut(s) 130, 176
SfaNI GCATC 1 cut(s) 595
SfcI CTRYAG 1 cut(s) 518
SfiI GGCCNNNNNGGCC 1 cut(s) 857
SfoI GGCGCC 1 cut(s) 327
Sfr274I CTCGAG 2 cut(s) 600, 633
SinI GGWCC 4 cut(s) 249, 437, 705, 730
SlaI CTCGAG 2 cut(s) 600, 633
SmlI CTYRAG 3 cut(s) 600, 609, 633
SmoI CTYRAG 3 cut(s) 600, 609, 633
Sse9I AATT 1 cut(s) 911
SspDI GGCGCC 1 cut(s) 325
StyD4I CCNGG 4 cut(s) 27, 498, 594, 828
StyI CCWWGG 2 cut(s) 45, 202
TaaI ACNGT 3 cut(s) 88, 119, 160
TaiI ACGT 2 cut(s) 577, 894
TaqI TCGA 6 cut(s) 162, 357, 601, 634, 726, 789
TaqII GACCGA 1 cut(s) 266
TasI AATT 1 cut(s) 911
TauI GCSGC 5 cut(s) 214, 337, 587, 825, 881
TfiI GAWTC 4 cut(s) 32, 185, 230, 354
Tru1I TTAA 1 cut(s) 662
Tru9I TTAA 1 cut(s) 662
TseI GCWGC 4 cut(s) 56, 65, 520, 803
TspDTI ATGAA 3 cut(s) 285, 567, 681
Van91I CCANNNNNTGG 1 cut(s) 934
VpaK11BI GGWCC 4 cut(s) 249, 437, 705, 730
XhoI CTCGAG 2 cut(s) 600, 633
ZraI GACGTC 1 cut(s) 575
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.