Rmu_sc0002745.1_g000013

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002745.1
OG0000214
Physical Location & Seq
Forward (+)
53141 .. 56299
3159 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002745.1_g000013.1.cds

Sequence Viewer

Length: 2133 bp
atgggtgttcaatgcagaagtcagaccggagaggatagaagtcgactgttgggctttggtggaggtgataatcaagcgagtctgggtcccacacctcgcgattgtttgccatatgatgctatggcctattatgggcttcccatccatcgttccatagcagctcttcggaaggaggtccgagcgagagatttggcccgttgggattatgtgggtatcacccaaactatcgatctaagcttttgtcttccccataataccagccctgcacagctagccgctgctctttgcttttggaacacctccagtaatacattcgattttcagtttgggcagatgagcataactctgctggatgttcttaccatcacggggttgcccattgactttgacccctacgtgcatggtcaatttgatggcattcaatttcctttgagaatggctatggctggtcggcggcatcacagcaaatcctacccattttggcgcaactgttactgcacccagtgtgaccatacaggaggtattacattcctggaattctgcaacataaggtatcgagctctaccctactccgagtgttttatttacttgtacttgctgaaagagatgccggacccaaaaatagtcttttctaggcgtttccctcctccctttgatgatggctttctgcctagtggacaagatcatagcgaaagagcactcctggcctttcgtcgcgccatctccttcttggatattcgtcatgccaccgaccaccggagattagccccacctgggtttgccccatttcagagtcagtttactttgatagtgattccccctagggtcagagcgctgtaccctctcaacgatgtcgacgatgatgatgctgattggtggaaagaagtgtccgtgaactgttgggacatgccatatgacgaactcttcgccctgatctttcgtggcatgaatagtcctggtccgaaggaccgtaagattcttgagcgcttctccaaccctgcagcacaacccccgcgacctgttctaccttcttgctcatcgcatccagggatacaaatccacgagcctagggcaacacaagctaccaggagcaggacaaccactgttcaggccgggaaacaaaaggcaatagcagaggagactcctgagggagagtcttctcatgatgaagatctcgctgaggccactgctgtcttcgttcgcaaaagcgatcaagctcaattcgtcgaaaagagttttgaagatgacgaacctctgggaatgcgattgcccccggcgcctcttccctctcccatatctacagagcatccgcaaggtcctaccattctaataacgatctccgataacgactcccccgagcaagaaagcgtggaaagccactctgaggcttctgccgcttatgaggaactaatgactacagagattccagcggcactagaggtccaagaggtgaatgaagcggggcctcttcctcttggggaccacgtacaagatatcgacccgacagctcgagaggaggtggtccttgacacagaagcaatggccggcgggacgtacatcctagatttgggggacgaggcgagcagtggtggtctcttgatttcggaattagacgaggcgagcagtggtggtctcttgatttcagaattagtcgaggcgagcattgaggccgaaggttctgctatcaaagctgctcatttccaacactctactgatgaacctcacattgaatttccaaagtctctcgcagctgagatgcttgaaaagctagctcgaatccttgaggaaactcctcctaccgcaactgaactagcgaggacagagcttcgaaaccttttgggacagcgacggctggggcctgaagaactccccaagatttgggaagccattgtgttccttcgccgagagcatgcagtcaatttaactcagctcgacactatagagaagctgttgaaagaccttgacgttgcccgcactcgccaatctgcagtggaggctcgagctcgtgctgcccgcgtggtacggaataaccttgctagtcagatggagactctttgcgacaccttgattgatcgggccactcgcatgggagagataaggctccagaagttagacttagaagcccaaatctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

710

Amino Acids

79.2

Weight (kDa)

4.94

Isoelectric Point (pI)

54.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000214)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0079611
rosa_multiflora Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha Rh3DG208400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1276
AccB7I CCANNNNNTGG 1 cut(s) 1878
AccI GTMKAC 2 cut(s) 43, 855
AccII CGCG 4 cut(s) 99, 717, 1015, 2016
AcoI YGGCCR 1 cut(s) 1542
AcsI RAATTY 2 cut(s) 536, 1730
AcuI CTGAAG 1 cut(s) 1881
AcyI GRCGYC 1 cut(s) 1277
AdeI CACNNNGTG 1 cut(s) 504
AfaI GTAC 5 cut(s) 593, 839, 1488, 1556, 2022
AfeI AGCGCT 2 cut(s) 834, 986
AfiI CCNNNNNNNGG 8 cut(s) 132, 369, 756, 774, 1092, 1384, 1567, 1878
AgsI TTSAA 6 cut(s) 11, 422, 1241, 1730, 1763, 1954
AjnI CCWGG 6 cut(s) 531, 702, 772, 955, 1045, 1085
Alw21I GWGCWC 3 cut(s) 562, 700, 2005
Alw26I GTCTC 5 cut(s) 1133, 1598, 1637, 1746, 2042
Ama87I CYCGRG 3 cut(s) 1355, 1509, 1998
Aor51HI AGCGCT 2 cut(s) 834, 986
ApeKI GCWGC 6 cut(s) 158, 278, 1001, 1691, 1748, 2009
ApoI RAATTY 2 cut(s) 536, 1730
ArsI GACNNNNNNTTYG 2 cut(s) 908, 940
AspA2I CCTAGG 2 cut(s) 821, 1067
AspLEI GCGC 5 cut(s) 486, 719, 835, 987, 1279
AsuC2I CCSGG 2 cut(s) 1114, 1274
AsuHPI GGTGA 3 cut(s) 77, 208, 1462
AsuII TTCGAA 1 cut(s) 1828
AsuNHI GCTAGC 2 cut(s) 271, 1768
AvaI CYCGRG 3 cut(s) 1355, 1509, 1998
AvaII GGWCC 9 cut(s) 86, 175, 613, 959, 967, 1316, 1441, 1480, 1522
AvrII CCTAGG 2 cut(s) 821, 1067
AxyI CCTNAGG 1 cut(s) 1146
BanI GGYRCC 1 cut(s) 1276
BanII GRGCYC 2 cut(s) 562, 2005
BauI CACGAG 2 cut(s) 1061, 2004
BbsI GAAGAC 3 cut(s) 236, 1149, 1186
Bbv12I GWGCWC 3 cut(s) 562, 700, 2005
BbvCI CCTCAGC 1 cut(s) 1179
BbvI GCAGC 6 cut(s) 170, 265, 1013, 1678, 1760, 1996
BccI CCATC 7 cut(s) 149, 153, 371, 407, 653, 728, 2038
BceAI ACGGC 1 cut(s) 1865
BcgI CGANNNNNNTGC 4 cut(s) 848, 882, 1661, 1695
BciT130I CCWGG 6 cut(s) 533, 704, 774, 957, 1047, 1087
BciVI GTATCC 1 cut(s) 1044
BcnI CCSGG 2 cut(s) 1114, 1274
BcoDI GTCTC 5 cut(s) 1133, 1598, 1637, 1746, 2042
BfmI CTRYAG 5 cut(s) 999, 1299, 1416, 1938, 1986
BfoI RGCGCY 3 cut(s) 836, 988, 1280
BfuI GTATCC 1 cut(s) 1044
BglII AGATCT 1 cut(s) 1171
BlnI CCTAGG 2 cut(s) 821, 1067
Bme1390I CCNGG 8 cut(s) 533, 704, 774, 957, 1047, 1087, 1114, 1274
Bme18I GGWCC 9 cut(s) 86, 175, 613, 959, 967, 1316, 1441, 1480, 1522
BmeT110I CYCGRG 3 cut(s) 1355, 1509, 1998
BmiI GGNNCC 8 cut(s) 87, 88, 615, 1278, 1464, 1481, 1857, 2102
BmrFI CCNGG 8 cut(s) 533, 704, 774, 957, 1047, 1087, 1114, 1274
BmrI ACTGGG 1 cut(s) 496
BmsI GCATC 7 cut(s) 106, 466, 597, 856, 1051, 1315, 1746
BmtI GCTAGC 2 cut(s) 275, 1772
BmuI ACTGGG 1 cut(s) 496
BpiI GAAGAC 3 cut(s) 236, 1149, 1186
BplI GAGNNNNNCTC 4 cut(s) 328, 360, 974, 1006
BpmI CTGGAG 2 cut(s) 286, 2087
Bpu10I CCTNAGC 1 cut(s) 1179
Bpu14I TTCGAA 1 cut(s) 1828
BpuEI CTTGAG 2 cut(s) 1001, 1802
BpuMI CCSGG 2 cut(s) 1114, 1274
Bsa29I ATCGAT 1 cut(s) 228
BsaAI YACGTR 2 cut(s) 397, 1486
BsaBI GATNNNNATC 2 cut(s) 1055, 1170
BsaHI GRCGYC 1 cut(s) 1277
BsaI GGTCTC 2 cut(s) 1598, 1637
BsaJI CCNNGG 5 cut(s) 773, 821, 1046, 1067, 1272
BsaWI WCCGGW 2 cut(s) 26, 756
Bsc4I CCNNNNNNNGG 8 cut(s) 132, 369, 756, 774, 1092, 1384, 1567, 1878
Bse118I RCCGGY 1 cut(s) 1544
Bse1I ACTGG 2 cut(s) 303, 502
Bse21I CCTNAGG 1 cut(s) 1146
Bse3DI GCAATG 1 cut(s) 1545
Bse8I GATNNNNATC 2 cut(s) 1055, 1170
BseBI CCWGG 6 cut(s) 533, 704, 774, 957, 1047, 1087
BseCI ATCGAT 1 cut(s) 228
BseDI CCNNGG 5 cut(s) 773, 821, 1046, 1067, 1272
BseGI GGATG 5 cut(s) 141, 358, 1042, 1306, 1557
BseJI GATNNNNATC 2 cut(s) 1055, 1170
BseLI CCNNNNNNNGG 8 cut(s) 132, 369, 756, 774, 1092, 1384, 1567, 1878
BseMI GCAATG 1 cut(s) 1545
BseMII CTCAG 5 cut(s) 1137, 1170, 1374, 1743, 1940
BseNI ACTGG 2 cut(s) 303, 502
BseRI GAGGAG 4 cut(s) 636, 1151, 1529, 1782
BseXI GCAGC 6 cut(s) 170, 265, 1013, 1678, 1760, 1996
BseYI CCCAGC 1 cut(s) 1852
BsgI GTGCAG 2 cut(s) 249, 481
Bsh1236I CGCG 4 cut(s) 99, 717, 1015, 2016
BshNI GGYRCC 1 cut(s) 1276
BshVI ATCGAT 1 cut(s) 228
BsiHKAI GWGCWC 3 cut(s) 562, 700, 2005
BsiHKCI CYCGRG 3 cut(s) 1355, 1509, 1998
BsiSI CCGG 6 cut(s) 27, 611, 757, 1113, 1274, 1545
BslFI GGGAC 6 cut(s) 72, 917, 1493, 1564, 1586, 1854
BslI CCNNNNNNNGG 8 cut(s) 132, 369, 756, 774, 1092, 1384, 1567, 1878
BsmAI GTCTC 5 cut(s) 1133, 1598, 1637, 1746, 2042
BsmFI GGGAC 6 cut(s) 72, 917, 1493, 1564, 1586, 1854
BsmI GAATGC 2 cut(s) 417, 1266
Bso31I GGTCTC 2 cut(s) 1598, 1637
BsoBI CYCGRG 3 cut(s) 1355, 1509, 1998
Bsp119I TTCGAA 1 cut(s) 1828
Bsp1286I GDGCHC 3 cut(s) 562, 700, 2005
Bsp143I GATC 7 cut(s) 229, 682, 933, 1171, 1210, 1335, 2071
Bsp68I TCGCGA 1 cut(s) 99
BspCNI CTCAG 5 cut(s) 1138, 1171, 1375, 1744, 1939
BspDI ATCGAT 1 cut(s) 228
BspFNI CGCG 4 cut(s) 99, 717, 1015, 2016
BspHI TCATGA 1 cut(s) 1162
BspLI GGNNCC 8 cut(s) 87, 88, 615, 1278, 1464, 1481, 1857, 2102
BspMAI CTGCAG 2 cut(s) 1003, 1990
BspOI GCTAGC 2 cut(s) 275, 1772
BspQI GCTCTTC 1 cut(s) 168
BspT104I TTCGAA 1 cut(s) 1828
BspT107I GGYRCC 1 cut(s) 1276
BspTNI GGTCTC 2 cut(s) 1598, 1637
BsrDI GCAATG 1 cut(s) 1545
BsrFI RCCGGY 1 cut(s) 1544
BsrI ACTGG 2 cut(s) 303, 502
BssAI RCCGGY 1 cut(s) 1544
BssECI CCNNGG 5 cut(s) 773, 821, 1046, 1067, 1272
BssMI GATC 7 cut(s) 229, 682, 933, 1171, 1210, 1335, 2071
BssNI GRCGYC 1 cut(s) 1277
BssSI CACGAG 2 cut(s) 1061, 2004
BssT1I CCWWGG 2 cut(s) 821, 1067
Bst2BI CACGAG 2 cut(s) 1061, 2004
Bst2UI CCWGG 6 cut(s) 533, 704, 774, 957, 1047, 1087
Bst4CI ACNGT 5 cut(s) 48, 491, 899, 971, 1105
Bst6I CTCTTC 4 cut(s) 168, 929, 1287, 1473
BstACI GRCGYC 1 cut(s) 1277
BstBAI YACGTR 2 cut(s) 397, 1486
BstBI TTCGAA 1 cut(s) 1828
BstC8I GCNNGC 9 cut(s) 273, 1546, 1582, 1621, 1660, 1770, 1911, 1972, 2014
BstDEI CTNAG 7 cut(s) 233, 1146, 1179, 1383, 1752, 1926, 2116
BstF5I GGATG 5 cut(s) 141, 358, 1042, 1306, 1557
BstFNI CGCG 4 cut(s) 99, 717, 1015, 2016
BstH2I RGCGCY 3 cut(s) 836, 988, 1280
BstHHI GCGC 5 cut(s) 486, 719, 835, 987, 1279
BstKTI GATC 7 cut(s) 232, 685, 936, 1174, 1213, 1338, 2074
BstMAI GTCTC 5 cut(s) 1133, 1598, 1637, 1746, 2042
BstMBI GATC 7 cut(s) 229, 682, 933, 1171, 1210, 1335, 2071
BstNI CCWGG 6 cut(s) 533, 704, 774, 957, 1047, 1087
BstNSI RCATGY 2 cut(s) 910, 1913
BstSCI CCNGG 8 cut(s) 531, 702, 772, 955, 1045, 1085, 1112, 1272
BstSFI CTRYAG 5 cut(s) 999, 1299, 1416, 1938, 1986
BstUI CGCG 4 cut(s) 99, 717, 1015, 2016
BstV1I GCAGC 6 cut(s) 170, 265, 1013, 1678, 1760, 1996
BstV2I GAAGAC 3 cut(s) 236, 1149, 1186
BstX2I RGATCY 1 cut(s) 1171
BstXI CCANNNNNNTGG 1 cut(s) 2086
BstYI RGATCY 1 cut(s) 1171
Bsu15I ATCGAT 1 cut(s) 228
Bsu36I CCTNAGG 1 cut(s) 1146
BsuI GTATCC 1 cut(s) 1044
BsuTUI ATCGAT 1 cut(s) 228
BtgZI GCGATG 1 cut(s) 1023
BtsCI GGATG 5 cut(s) 141, 358, 1042, 1306, 1557
BtsI GCAGTG 4 cut(s) 1185, 1591, 1630, 1995
BtsIMutI CAGTG 6 cut(s) 509, 1101, 1185, 1591, 1630, 1995
BtuMI TCGCGA 1 cut(s) 99
Cac8I GCNNGC 9 cut(s) 273, 1546, 1582, 1621, 1660, 1770, 1911, 1972, 2014
CciI TCATGA 1 cut(s) 1162
CfoI GCGC 5 cut(s) 486, 719, 835, 987, 1279
Cfr10I RCCGGY 1 cut(s) 1544
ClaI ATCGAT 1 cut(s) 228
Csp6I GTAC 5 cut(s) 592, 838, 1487, 1555, 2021
CviAII CATG 7 cut(s) 401, 743, 907, 946, 1163, 1910, 2086
CviQI GTAC 5 cut(s) 592, 838, 1487, 1555, 2021
DdeI CTNAG 7 cut(s) 233, 1146, 1179, 1383, 1752, 1926, 2116
DinI GGCGCC 1 cut(s) 1278
DpnI GATC 7 cut(s) 231, 684, 935, 1173, 1212, 1337, 2073
DpnII GATC 7 cut(s) 229, 682, 933, 1171, 1210, 1335, 2071
DraIII CACNNNGTG 1 cut(s) 504
EaeI YGGCCR 1 cut(s) 1542
Eam1104I CTCTTC 4 cut(s) 168, 929, 1287, 1473
EarI CTCTTC 4 cut(s) 168, 929, 1287, 1473
Ecl136II GAGCTC 2 cut(s) 560, 2003
Eco130I CCWWGG 2 cut(s) 821, 1067
Eco24I GRGCYC 2 cut(s) 562, 2005
Eco31I GGTCTC 2 cut(s) 1598, 1637
Eco32I GATATC 1 cut(s) 1495
Eco47I GGWCC 9 cut(s) 86, 175, 613, 959, 967, 1316, 1441, 1480, 1522
Eco47III AGCGCT 2 cut(s) 834, 986
Eco53kI GAGCTC 2 cut(s) 560, 2003
Eco57I CTGAAG 1 cut(s) 1881
Eco81I CCTNAGG 1 cut(s) 1146
Eco88I CYCGRG 3 cut(s) 1355, 1509, 1998
EcoICRI GAGCTC 2 cut(s) 560, 2003
EcoO109I RGGNCCY 4 cut(s) 86, 1316, 1463, 1856
EcoRI GAATTC 1 cut(s) 536
EcoRII CCWGG 6 cut(s) 531, 702, 772, 955, 1045, 1085
EcoRV GATATC 1 cut(s) 1495
EcoT14I CCWWGG 2 cut(s) 821, 1067
EcoT38I GRGCYC 2 cut(s) 562, 2005
EgeI GGCGCC 1 cut(s) 1278
EheI GGCGCC 1 cut(s) 1278
ErhI CCWWGG 2 cut(s) 821, 1067
FaeI CATG 7 cut(s) 404, 746, 910, 949, 1166, 1913, 2089
FalI AAGNNNNNCTT 2 cut(s) 2099, 2131
FaqI GGGAC 6 cut(s) 72, 917, 1493, 1564, 1586, 1854
FatI CATG 7 cut(s) 400, 742, 906, 945, 1162, 1909, 2085
FauI CCCGC 5 cut(s) 1020, 1453, 1541, 1979, 2021
FauNDI CATATG 2 cut(s) 112, 913
FblI GTMKAC 2 cut(s) 43, 855
FokI GGATG 5 cut(s) 128, 365, 1029, 1293, 1544
FriOI GRGCYC 2 cut(s) 562, 2005
GlaI GCGC 5 cut(s) 485, 718, 834, 986, 1278
GsaI CCCAGC 1 cut(s) 1856
GsuI CTGGAG 2 cut(s) 286, 2087
HaeII RGCGCY 3 cut(s) 836, 988, 1280
HapII CCGG 6 cut(s) 27, 611, 757, 1113, 1274, 1545
HhaI GCGC 5 cut(s) 486, 719, 835, 987, 1279
Hin1I GRCGYC 1 cut(s) 1277
Hin1II CATG 7 cut(s) 404, 746, 910, 949, 1166, 1913, 2089
Hin6I GCGC 5 cut(s) 484, 717, 833, 985, 1277
HinP1I GCGC 5 cut(s) 484, 717, 833, 985, 1277
HincII GTYRAC 2 cut(s) 44, 856
HindII GTYRAC 2 cut(s) 44, 856
HindIII AAGCTT 1 cut(s) 235
HpaII CCGG 6 cut(s) 27, 611, 757, 1113, 1274, 1545
HphI GGTGA 3 cut(s) 77, 208, 1462
Hpy166II GTNNAC 5 cut(s) 44, 677, 801, 856, 895
Hpy188III TCNNGA 8 cut(s) 98, 980, 1145, 1163, 1511, 1597, 1636, 2104
Hpy8I GTNNAC 5 cut(s) 44, 677, 801, 856, 895
Hpy99I CGWCG 4 cut(s) 717, 860, 1229, 1851
HpyAV CCTTC 6 cut(s) 163, 736, 958, 1038, 1667, 1907
HpyCH4III ACNGT 5 cut(s) 48, 491, 899, 971, 1105
HpyCH4IV ACGT 4 cut(s) 396, 1485, 1553, 1965
HpyCH4V TGCA 8 cut(s) 15, 266, 400, 498, 543, 1001, 1913, 1988
HpyF3I CTNAG 7 cut(s) 233, 1146, 1179, 1383, 1752, 1926, 2116
HpySE526I ACGT 4 cut(s) 396, 1485, 1553, 1965
Hsp92I GRCGYC 1 cut(s) 1277
Hsp92II CATG 7 cut(s) 404, 746, 910, 949, 1166, 1913, 2089
HspAI GCGC 5 cut(s) 484, 717, 833, 985, 1277
KasI GGCGCC 1 cut(s) 1276
KflI GGGWCCC 1 cut(s) 86
KroI GCCGGC 1 cut(s) 1544
KroNI GCCGGC 1 cut(s) 1546
Kzo9I GATC 7 cut(s) 229, 682, 933, 1171, 1210, 1335, 2071
LguI GCTCTTC 1 cut(s) 168
LmnI GCTCC 2 cut(s) 1089, 2106
Lsp1109I GCAGC 6 cut(s) 170, 265, 1013, 1678, 1760, 1996
LweI GCATC 7 cut(s) 106, 466, 597, 856, 1051, 1315, 1746
MaeII ACGT 4 cut(s) 396, 1485, 1553, 1965
MaeIII GTNAC 2 cut(s) 491, 506
MalI GATC 7 cut(s) 231, 684, 935, 1173, 1212, 1337, 2073
MboI GATC 7 cut(s) 229, 682, 933, 1171, 1210, 1335, 2071
MflI RGATCY 1 cut(s) 1171
MhlI GDGCHC 3 cut(s) 562, 700, 2005
MluCI AATT 8 cut(s) 407, 422, 536, 1220, 1607, 1646, 1730, 1918
Mly113I GGCGCC 1 cut(s) 1277
MlyI GAGTC 6 cut(s) 88, 802, 1135, 1163, 1343, 2044
MmeI TCCRAC 2 cut(s) 1017, 1726
MroNI GCCGGC 1 cut(s) 1544
MseI TTAA 1 cut(s) 1922
MslI CAYNNNNRTG 1 cut(s) 2084
MspA1I CMGCKG 3 cut(s) 278, 1430, 1751
MspI CCGG 6 cut(s) 27, 611, 757, 1113, 1274, 1545
MspR9I CCNGG 8 cut(s) 533, 704, 774, 957, 1047, 1087, 1114, 1274
Mva1269I GAATGC 2 cut(s) 417, 1266
MvaI CCWGG 6 cut(s) 533, 704, 774, 957, 1047, 1087
MvnI CGCG 4 cut(s) 99, 717, 1015, 2016
NaeI GCCGGC 1 cut(s) 1546
NarI GGCGCC 1 cut(s) 1277
NciI CCSGG 2 cut(s) 1114, 1274
NdeI CATATG 2 cut(s) 112, 913
NdeII GATC 7 cut(s) 229, 682, 933, 1171, 1210, 1335, 2071
NgoMIV GCCGGC 1 cut(s) 1544
NheI GCTAGC 2 cut(s) 271, 1768
NlaIII CATG 7 cut(s) 404, 746, 910, 949, 1166, 1913, 2089
NlaIV GGNNCC 8 cut(s) 87, 88, 615, 1278, 1464, 1481, 1857, 2102
NmeAIII GCCGAG 1 cut(s) 1928
NmuCI GTSAC 1 cut(s) 506
NruI TCGCGA 1 cut(s) 99
NspI RCATGY 2 cut(s) 910, 1913
NspV TTCGAA 1 cut(s) 1828
PaeI GCATGC 1 cut(s) 1913
PaeR7I CTCGAG 2 cut(s) 1509, 1998
PagI TCATGA 1 cut(s) 1162
PciSI GCTCTTC 1 cut(s) 168
PcsI WCGNNNNNNNCGW 2 cut(s) 855, 1353
PctI GAATGC 2 cut(s) 417, 1266
PdiI GCCGGC 1 cut(s) 1546
PfeI GAWTC 4 cut(s) 814, 976, 1423, 1776
PflMI CCANNNNNTGG 1 cut(s) 1878
PfoI TCCNGGA 1 cut(s) 531
PleI GAGTC 6 cut(s) 87, 801, 1135, 1162, 1343, 2044
PluTI GGCGCC 1 cut(s) 1280
PpsI GAGTC 6 cut(s) 87, 801, 1135, 1162, 1343, 2044
Ppu21I YACGTR 2 cut(s) 397, 1486
PpuMI RGGWCCY 2 cut(s) 86, 1316
Psp124BI GAGCTC 2 cut(s) 562, 2005
Psp5II RGGWCCY 2 cut(s) 86, 1316
Psp6I CCWGG 6 cut(s) 531, 702, 772, 955, 1045, 1085
PspFI CCCAGC 1 cut(s) 1852
PspGI CCWGG 6 cut(s) 531, 702, 772, 955, 1045, 1085
PspN4I GGNNCC 8 cut(s) 87, 88, 615, 1278, 1464, 1481, 1857, 2102
PspPPI RGGWCCY 2 cut(s) 86, 1316
PspXI VCTCGAGB 1 cut(s) 1998
PstI CTGCAG 2 cut(s) 1003, 1990
PsuI RGATCY 1 cut(s) 1171
PvuII CAGCTG 1 cut(s) 1751
RruI TCGCGA 1 cut(s) 99
RsaI GTAC 5 cut(s) 593, 839, 1488, 1556, 2022
RsaNI GTAC 5 cut(s) 592, 838, 1487, 1555, 2021
RseI CAYNNNNRTG 1 cut(s) 2084
SacI GAGCTC 2 cut(s) 562, 2005
SalI GTCGAC 2 cut(s) 42, 854
SapI GCTCTTC 1 cut(s) 168
SaqAI TTAA 1 cut(s) 1922
Sau3AI GATC 7 cut(s) 229, 682, 933, 1171, 1210, 1335, 2071
SchI GAGTC 6 cut(s) 88, 802, 1135, 1163, 1343, 2044
ScrFI CCNGG 8 cut(s) 533, 704, 774, 957, 1047, 1087, 1114, 1274
SduI GDGCHC 3 cut(s) 562, 700, 2005
SfaNI GCATC 7 cut(s) 106, 466, 597, 856, 1051, 1315, 1746
SfcI CTRYAG 5 cut(s) 999, 1299, 1416, 1938, 1986
SfoI GGCGCC 1 cut(s) 1278
Sfr274I CTCGAG 2 cut(s) 1509, 1998
SfuI TTCGAA 1 cut(s) 1828
SinI GGWCC 9 cut(s) 86, 175, 613, 959, 967, 1316, 1441, 1480, 1522
SlaI CTCGAG 2 cut(s) 1509, 1998
SmiMI CAYNNNNRTG 1 cut(s) 2084
SmlI CTYRAG 4 cut(s) 980, 1509, 1781, 1998
SmoI CTYRAG 4 cut(s) 980, 1509, 1781, 1998
SphI GCATGC 1 cut(s) 1913
Sse9I AATT 8 cut(s) 407, 422, 536, 1220, 1607, 1646, 1730, 1918
SspDI GGCGCC 1 cut(s) 1276
SstI GAGCTC 2 cut(s) 562, 2005
StyD4I CCNGG 8 cut(s) 531, 702, 772, 955, 1045, 1085, 1112, 1272
StyI CCWWGG 2 cut(s) 821, 1067
TaaI ACNGT 5 cut(s) 48, 491, 899, 971, 1105
TaiI ACGT 4 cut(s) 399, 1488, 1556, 1968
TasI AATT 8 cut(s) 407, 422, 536, 1220, 1607, 1646, 1730, 1918
TatI WGTACW 1 cut(s) 591
TauI GCSGC 4 cut(s) 278, 457, 1397, 1433
TfiI GAWTC 4 cut(s) 814, 976, 1423, 1776
Tru1I TTAA 1 cut(s) 1922
Tru9I TTAA 1 cut(s) 1922
TscAI CASTG 6 cut(s) 509, 1108, 1192, 1591, 1630, 1995
TseFI GTSAC 1 cut(s) 506
TseI GCWGC 6 cut(s) 158, 278, 1001, 1691, 1748, 2009
Tsp45I GTSAC 1 cut(s) 506
TspDTI ATGAA 4 cut(s) 962, 1182, 1470, 1731
TspGWI ACGGA 2 cut(s) 880, 2038
TspRI CASTG 6 cut(s) 509, 1108, 1192, 1591, 1630, 1995
Van91I CCANNNNNTGG 1 cut(s) 1878
VpaK11BI GGWCC 9 cut(s) 86, 175, 613, 959, 967, 1316, 1441, 1480, 1522
XapI RAATTY 2 cut(s) 536, 1730
XceI RCATGY 2 cut(s) 910, 1913
XcmI CCANNNNNNNNNTGG 1 cut(s) 727
XhoI CTCGAG 2 cut(s) 1509, 1998
XmaJI CCTAGG 2 cut(s) 821, 1067
XmiI GTMKAC 2 cut(s) 43, 855
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.