Rmu_sc0001047.1_g000012

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001047.1
OG0000214
Physical Location & Seq
Reverse (-)
68251 .. 70291
2041 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001047.1_g000012.1.cds

Sequence Viewer

Length: 1488 bp
atggcctattatgggcttcccatccgccgtctcatagcggctcttcggcaggtgcccggtgattttagcagttggggaccaaggaggaaagtgggcttctggcctaccatcgctcccaaggaaaatgtttggtatcaggaggttcgagcgagagatttggccagatgggatgtggtgggtattacccaaaccatcgatctatgcttctgtcttccccataatactagccttgcaccgctagcccccgctctttgcttctggaacacctccagcaatacattagattttcggtttgggcagatgagcataactctgctggatgttcttaccatcaccgggttgcccattgactttgacccctatgtgcatgtttttccaacaaacctactgggccctggaattctctggccactgctttctacaatggtatttgcgttggccttgggcaacctgtattggatttatttcccttgcttctattgcagtgatattccaagggaacctccagtcgattcccttttggggaactggctttgccgcaaagtaaggtatcgagctccaccctactccgagtgttttatttacttatacttgctgaaagagatgccggacccaaaaatagtcctttctaggcgattccctcctccccttgatgatggctttatgcccagtggacgggatcatagcgaaagagccctcttggcctttcgtcgctccagctcctgcttggatattcgtcttgccaccgaccgcttggtaccttggcctctggttgattctgccaaatactacacctcttggcggagattatctccacctaggtctgccccctttcagaatcagtttattttgatagtgattcccccttgggtcagagcgttgtaccccctcaacgatgtcgatgatgattatgctgattggtggaaagaggtgtctgtgaactgttgggacctgccacatgacgaactcttcttcctgatctttcgtggcatgagtagtcctggtccagaagactgcgagattcttgagcgcttctccaaccctacagcacaacccctgcaacctattctaccttctcgctcatcgcatccagggatacaaatccacgagcctagggcaacacaaactacccagagcgggatagcctctgttcaggccaggaaacaaaaggtattagcagaggagactcctgagggagagtcttctcaagatgaagatcccgttgaggccactactgtcttcgcttgcaaacgtgatcgagctcaattagtcgaagagagttttgaagatgacgaacctctgggaatgcgattgaggaccactgatccctctcgcctgagcaaagctggatcctcagccgctatagaagggctaactcatttgctagttcaagcatcaactaaccccgtggcgcctcttccatctcccacatctacagagtatctgcaaggttctaccattctaataacgatctccaagggtatctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

495

Amino Acids

55.99

Weight (kDa)

5.53

Isoelectric Point (pI)

56.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000214)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0079611
rosa_multiflora Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha Rh3DG208400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 40
Acc36I ACCTGC 2 cut(s) 40, 960
Acc65I GGTACC 1 cut(s) 757
AccB1I GGYRCC 3 cut(s) 52, 757, 1411
AccBSI CCGCTC 2 cut(s) 248, 1137
AciI CCGC 9 cut(s) 25, 38, 236, 246, 538, 751, 802, 1137, 1359
AclWI GGATC 5 cut(s) 687, 1211, 1319, 1344, 1357
AcoI YGGCCR 2 cut(s) 159, 407
AcsI RAATTY 1 cut(s) 399
AcyI GRCGYC 1 cut(s) 1412
AfaI GTAC 2 cut(s) 759, 884
AfeI AGCGCT 1 cut(s) 1031
AfiI CCNNNNNNNGG 6 cut(s) 12, 336, 522, 675, 801, 1137
AgsI TTSAA 2 cut(s) 1286, 1391
AjnI CCWGG 4 cut(s) 394, 1000, 1090, 1157
AloI GAACNNNNNNTCC 2 cut(s) 957, 989
AluBI AGCT 4 cut(s) 557, 720, 1262, 1346
AluI AGCT 4 cut(s) 557, 720, 1262, 1346
Alw21I GWGCWC 2 cut(s) 559, 1264
Alw26I GTCTC 2 cut(s) 35, 1178
AlwI GGATC 5 cut(s) 687, 1211, 1319, 1344, 1357
AlwNI CAGNNNCTG 1 cut(s) 723
Aor51HI AGCGCT 1 cut(s) 1031
ApaI GGGCCC 1 cut(s) 395
ApoI RAATTY 1 cut(s) 399
Asp718I GGTACC 1 cut(s) 757
AspA2I CCTAGG 2 cut(s) 818, 1112
AspLEI GCGC 2 cut(s) 1032, 1414
AspS9I GGNCC 7 cut(s) 77, 391, 392, 610, 949, 1004, 1317
AsuC2I CCSGG 2 cut(s) 57, 337
AsuHPI GGTGA 2 cut(s) 71, 325
AsuNHI GCTAGC 1 cut(s) 238
AvaII GGWCC 5 cut(s) 77, 610, 949, 1004, 1317
AvrII CCTAGG 2 cut(s) 818, 1112
AxyI CCTNAGG 1 cut(s) 1191
BaeGI GKGCMC 2 cut(s) 57, 395
BalI TGGCCA 2 cut(s) 161, 409
BamHI GGATCC 1 cut(s) 1349
BanI GGYRCC 3 cut(s) 52, 757, 1411
BanII GRGCYC 4 cut(s) 395, 559, 697, 1264
BauI CACGAG 1 cut(s) 1106
BbsI GAAGAC 4 cut(s) 203, 1017, 1194, 1231
Bbv12I GWGCWC 2 cut(s) 559, 1264
BbvCI CCTCAGC 1 cut(s) 1354
BccI CCATC 7 cut(s) 29, 116, 159, 200, 338, 650, 1429
BceAI ACGGC 1 cut(s) 12
BciT130I CCWGG 4 cut(s) 396, 1002, 1092, 1159
BciVI GTATCC 1 cut(s) 1089
BcnI CCSGG 2 cut(s) 57, 337
BcoDI GTCTC 2 cut(s) 35, 1178
BfaI CTAG 6 cut(s) 225, 239, 630, 819, 1113, 1385
BfmI CTRYAG 3 cut(s) 1044, 1362, 1434
BfoI RGCGCY 2 cut(s) 1033, 1415
BfuAI ACCTGC 2 cut(s) 40, 960
BfuI GTATCC 1 cut(s) 1089
BglI GCCNNNNNGGC 1 cut(s) 701
BisI GCNGC 3 cut(s) 39, 538, 1359
BlnI CCTAGG 2 cut(s) 818, 1112
BlsI GCNGC 3 cut(s) 40, 539, 1360
Bme1390I CCNGG 6 cut(s) 57, 337, 396, 1002, 1092, 1159
Bme18I GGWCC 5 cut(s) 77, 610, 949, 1004, 1317
BmgT120I GGNCC 7 cut(s) 77, 391, 392, 610, 949, 1004, 1317
BmiI GGNNCC 9 cut(s) 54, 78, 393, 501, 612, 759, 950, 1351, 1413
BmrFI CCNGG 6 cut(s) 57, 337, 396, 1002, 1092, 1159
BmrI ACTGGG 2 cut(s) 398, 663
BmsI GCATC 3 cut(s) 594, 1096, 1403
BmtI GCTAGC 1 cut(s) 242
BmuI ACTGGG 2 cut(s) 398, 663
BpiI GAAGAC 4 cut(s) 203, 1017, 1194, 1231
BplI GAGNNNNNCTC 6 cut(s) 295, 327, 796, 828, 1019, 1051
BpmI CTGGAG 3 cut(s) 253, 489, 700
Bpu10I CCTNAGC 2 cut(s) 1337, 1354
BpuEI CTTGAG 2 cut(s) 1046, 1191
BpuMI CCSGG 2 cut(s) 57, 337
Bsa29I ATCGAT 1 cut(s) 195
BsaBI GATNNNNATC 2 cut(s) 1100, 1215
BsaHI GRCGYC 1 cut(s) 1412
BsaXI ACNNNNNCTCC 2 cut(s) 97, 127
Bsc4I CCNNNNNNNGG 6 cut(s) 12, 336, 522, 675, 801, 1137
Bse1I ACTGG 4 cut(s) 393, 506, 533, 669
Bse21I CCTNAGG 1 cut(s) 1191
Bse8I GATNNNNATC 2 cut(s) 1100, 1215
BseBI CCWGG 4 cut(s) 396, 1002, 1092, 1159
BseCI ATCGAT 1 cut(s) 195
BseGI GGATG 4 cut(s) 21, 175, 325, 1087
BseJI GATNNNNATC 2 cut(s) 1100, 1215
BseLI CCNNNNNNNGG 6 cut(s) 12, 336, 522, 675, 801, 1137
BseMII CTCAG 3 cut(s) 1182, 1328, 1368
BseNI ACTGG 4 cut(s) 393, 506, 533, 669
BseRI GAGGAG 2 cut(s) 633, 1196
BseSI GKGCMC 2 cut(s) 57, 395
Bsh1285I CGRYCG 1 cut(s) 751
BshNI GGYRCC 3 cut(s) 52, 757, 1411
BshVI ATCGAT 1 cut(s) 195
BsiEI CGRYCG 1 cut(s) 751
BsiHKAI GWGCWC 2 cut(s) 559, 1264
BsiSI CCGG 3 cut(s) 57, 336, 608
BslFI GGGAC 2 cut(s) 90, 962
BslI CCNNNNNNNGG 6 cut(s) 12, 336, 522, 675, 801, 1137
BsmAI GTCTC 2 cut(s) 35, 1178
BsmBI CGTCTC 1 cut(s) 35
BsmFI GGGAC 2 cut(s) 90, 962
BsmI GAATGC 1 cut(s) 1311
Bsp120I GGGCCC 1 cut(s) 391
Bsp1286I GDGCHC 5 cut(s) 57, 395, 559, 697, 1264
Bsp143I GATC 8 cut(s) 196, 679, 978, 1216, 1255, 1324, 1349, 1470
BspACI CCGC 9 cut(s) 25, 38, 236, 246, 538, 751, 802, 1137, 1359
BspCNI CTCAG 3 cut(s) 1183, 1329, 1367
BspDI ATCGAT 1 cut(s) 195
BspLI GGNNCC 9 cut(s) 54, 78, 393, 501, 612, 759, 950, 1351, 1413
BspMI ACCTGC 2 cut(s) 40, 960
BspOI GCTAGC 1 cut(s) 242
BspPI GGATC 5 cut(s) 687, 1211, 1319, 1344, 1357
BspQI GCTCTTC 1 cut(s) 48
BspT107I GGYRCC 3 cut(s) 52, 757, 1411
BsrBI CCGCTC 2 cut(s) 248, 1137
BsrI ACTGG 4 cut(s) 393, 506, 533, 669
BssMI GATC 8 cut(s) 196, 679, 978, 1216, 1255, 1324, 1349, 1470
BssNI GRCGYC 1 cut(s) 1412
BssSI CACGAG 1 cut(s) 1106
BssT1I CCWWGG 9 cut(s) 80, 117, 441, 494, 761, 818, 866, 1112, 1476
Bst2BI CACGAG 1 cut(s) 1106
Bst2UI CCWGG 4 cut(s) 396, 1002, 1092, 1159
Bst4CI ACNGT 2 cut(s) 944, 1237
Bst6I CTCTTC 4 cut(s) 48, 974, 1269, 1422
BstACI GRCGYC 1 cut(s) 1412
BstC8I GCNNGC 2 cut(s) 240, 1246
BstDEI CTNAG 3 cut(s) 1191, 1337, 1354
BstDSI CCRYGG 1 cut(s) 1407
BstF5I GGATG 4 cut(s) 21, 175, 325, 1087
BstH2I RGCGCY 2 cut(s) 1033, 1415
BstHHI GCGC 2 cut(s) 1032, 1414
BstKTI GATC 8 cut(s) 199, 682, 981, 1219, 1258, 1327, 1352, 1473
BstMAI GTCTC 2 cut(s) 35, 1178
BstMBI GATC 8 cut(s) 196, 679, 978, 1216, 1255, 1324, 1349, 1470
BstMCI CGRYCG 1 cut(s) 751
BstMWI GCNNNNNNNGC 3 cut(s) 239, 480, 701
BstNI CCWGG 4 cut(s) 396, 1002, 1092, 1159
BstNSI RCATGY 1 cut(s) 371
BstSCI CCNGG 6 cut(s) 55, 335, 394, 1000, 1090, 1157
BstSFI CTRYAG 3 cut(s) 1044, 1362, 1434
BstSLI GKGCMC 2 cut(s) 57, 395
BstV2I GAAGAC 4 cut(s) 203, 1017, 1194, 1231
BstX2I RGATCY 2 cut(s) 1216, 1349
BstYI RGATCY 2 cut(s) 1216, 1349
Bsu15I ATCGAT 1 cut(s) 195
Bsu36I CCTNAGG 1 cut(s) 1191
BsuI GTATCC 1 cut(s) 1089
BsuTUI ATCGAT 1 cut(s) 195
BtgI CCRYGG 1 cut(s) 1407
BtgZI GCGATG 2 cut(s) 94, 1068
BtsCI GGATG 4 cut(s) 21, 175, 325, 1087
BtsI GCAGTG 2 cut(s) 410, 490
BtsIMutI CAGTG 4 cut(s) 410, 490, 676, 1320
BveI ACCTGC 2 cut(s) 40, 960
Cac8I GCNNGC 2 cut(s) 240, 1246
CaiI CAGNNNCTG 1 cut(s) 723
CfoI GCGC 2 cut(s) 1032, 1414
Cfr13I GGNCC 7 cut(s) 77, 391, 392, 610, 949, 1004, 1317
ClaI ATCGAT 1 cut(s) 195
Csp6I GTAC 2 cut(s) 758, 883
CviAII CATG 3 cut(s) 368, 959, 991
CviQI GTAC 2 cut(s) 758, 883
DdeI CTNAG 3 cut(s) 1191, 1337, 1354
DinI GGCGCC 1 cut(s) 1413
DpnI GATC 8 cut(s) 198, 681, 980, 1218, 1257, 1326, 1351, 1472
DpnII GATC 8 cut(s) 196, 679, 978, 1216, 1255, 1324, 1349, 1470
EaeI YGGCCR 2 cut(s) 159, 407
Eam1104I CTCTTC 4 cut(s) 48, 974, 1269, 1422
EarI CTCTTC 4 cut(s) 48, 974, 1269, 1422
EciI GGCGGA 2 cut(s) 14, 817
Ecl136II GAGCTC 2 cut(s) 557, 1262
Eco130I CCWWGG 9 cut(s) 80, 117, 441, 494, 761, 818, 866, 1112, 1476
Eco24I GRGCYC 4 cut(s) 395, 559, 697, 1264
Eco47I GGWCC 5 cut(s) 77, 610, 949, 1004, 1317
Eco47III AGCGCT 1 cut(s) 1031
Eco53kI GAGCTC 2 cut(s) 557, 1262
Eco81I CCTNAGG 1 cut(s) 1191
EcoICRI GAGCTC 2 cut(s) 557, 1262
EcoO109I RGGNCCY 2 cut(s) 392, 949
EcoRI GAATTC 1 cut(s) 399
EcoRII CCWGG 4 cut(s) 394, 1000, 1090, 1157
EcoT14I CCWWGG 9 cut(s) 80, 117, 441, 494, 761, 818, 866, 1112, 1476
EcoT38I GRGCYC 4 cut(s) 395, 559, 697, 1264
EgeI GGCGCC 1 cut(s) 1413
EheI GGCGCC 1 cut(s) 1413
ErhI CCWWGG 9 cut(s) 80, 117, 441, 494, 761, 818, 866, 1112, 1476
Esp3I CGTCTC 1 cut(s) 35
FaeI CATG 3 cut(s) 371, 962, 994
FaqI GGGAC 2 cut(s) 90, 962
FatI CATG 3 cut(s) 367, 958, 990
FauI CCCGC 2 cut(s) 253, 1130
Fnu4HI GCNGC 3 cut(s) 39, 538, 1359
FokI GGATG 4 cut(s) 8, 182, 332, 1074
FriOI GRGCYC 4 cut(s) 395, 559, 697, 1264
Fsp4HI GCNGC 3 cut(s) 39, 538, 1359
FspBI CTAG 6 cut(s) 225, 239, 630, 819, 1113, 1385
GlaI GCGC 2 cut(s) 1031, 1413
GluI GCNGC 3 cut(s) 39, 538, 1359
GsuI CTGGAG 3 cut(s) 253, 489, 700
HaeII RGCGCY 2 cut(s) 1033, 1415
HapII CCGG 3 cut(s) 57, 336, 608
HhaI GCGC 2 cut(s) 1032, 1414
Hin1I GRCGYC 1 cut(s) 1412
Hin1II CATG 3 cut(s) 371, 962, 994
Hin6I GCGC 2 cut(s) 1030, 1412
HinP1I GCGC 2 cut(s) 1030, 1412
HinfI GANTC 8 cut(s) 512, 636, 776, 838, 859, 1021, 1186, 1199
HpaII CCGG 3 cut(s) 57, 336, 608
HphI GGTGA 2 cut(s) 71, 325
Hpy166II GTNNAC 2 cut(s) 674, 940
Hpy188I TCNGA 3 cut(s) 571, 837, 875
Hpy188III TCNNGA 7 cut(s) 137, 259, 976, 1007, 1025, 1190, 1208
Hpy8I GTNNAC 2 cut(s) 674, 940
Hpy99I CGWCG 1 cut(s) 714
HpyAV CCTTC 2 cut(s) 1083, 1361
HpyCH4III ACNGT 2 cut(s) 944, 1237
HpyCH4IV ACGT 1 cut(s) 1252
HpyCH4V TGCA 6 cut(s) 233, 367, 483, 1060, 1248, 1447
HpyF10VI GCNNNNNNNGC 3 cut(s) 239, 480, 701
HpyF3I CTNAG 3 cut(s) 1191, 1337, 1354
HpySE526I ACGT 1 cut(s) 1252
Hsp92I GRCGYC 1 cut(s) 1412
Hsp92II CATG 3 cut(s) 371, 962, 994
HspAI GCGC 2 cut(s) 1030, 1412
KasI GGCGCC 1 cut(s) 1411
KpnI GGTACC 1 cut(s) 761
Kzo9I GATC 8 cut(s) 196, 679, 978, 1216, 1255, 1324, 1349, 1470
LguI GCTCTTC 1 cut(s) 48
LmnI GCTCC 4 cut(s) 118, 562, 719, 725
LweI GCATC 3 cut(s) 594, 1096, 1403
MaeI CTAG 6 cut(s) 225, 239, 630, 819, 1113, 1385
MaeII ACGT 1 cut(s) 1252
MalI GATC 8 cut(s) 198, 681, 980, 1218, 1257, 1326, 1351, 1472
MbiI CCGCTC 2 cut(s) 248, 1137
MboI GATC 8 cut(s) 196, 679, 978, 1216, 1255, 1324, 1349, 1470
MflI RGATCY 2 cut(s) 1216, 1349
MhlI GDGCHC 5 cut(s) 57, 395, 559, 697, 1264
MlsI TGGCCA 2 cut(s) 161, 409
MluCI AATT 2 cut(s) 399, 1265
MluNI TGGCCA 2 cut(s) 161, 409
Mly113I GGCGCC 1 cut(s) 1412
MlyI GAGTC 2 cut(s) 1180, 1208
MmeI TCCRAC 2 cut(s) 401, 1062
Mox20I TGGCCA 2 cut(s) 161, 409
MscI TGGCCA 2 cut(s) 161, 409
Msp20I TGGCCA 2 cut(s) 161, 409
MspI CCGG 3 cut(s) 57, 336, 608
MspR9I CCNGG 6 cut(s) 57, 337, 396, 1002, 1092, 1159
Mva1269I GAATGC 1 cut(s) 1311
MvaI CCWGG 4 cut(s) 396, 1002, 1092, 1159
MwoI GCNNNNNNNGC 3 cut(s) 239, 480, 701
NarI GGCGCC 1 cut(s) 1412
NciI CCSGG 2 cut(s) 57, 337
NdeII GATC 8 cut(s) 196, 679, 978, 1216, 1255, 1324, 1349, 1470
NheI GCTAGC 1 cut(s) 238
NlaIII CATG 3 cut(s) 371, 962, 994
NlaIV GGNNCC 9 cut(s) 54, 78, 393, 501, 612, 759, 950, 1351, 1413
NspI RCATGY 1 cut(s) 371
PaqCI CACCTGC 1 cut(s) 40
PciSI GCTCTTC 1 cut(s) 48
PctI GAATGC 1 cut(s) 1311
PfeI GAWTC 6 cut(s) 512, 636, 776, 838, 859, 1021
PkrI GCNGC 3 cut(s) 40, 539, 1360
PleI GAGTC 2 cut(s) 1180, 1207
PluTI GGCGCC 1 cut(s) 1415
PpsI GAGTC 2 cut(s) 1180, 1207
PpuMI RGGWCCY 1 cut(s) 949
Psp124BI GAGCTC 2 cut(s) 559, 1264
Psp5II RGGWCCY 1 cut(s) 949
Psp6I CCWGG 4 cut(s) 394, 1000, 1090, 1157
PspGI CCWGG 4 cut(s) 394, 1000, 1090, 1157
PspN4I GGNNCC 9 cut(s) 54, 78, 393, 501, 612, 759, 950, 1351, 1413
PspOMI GGGCCC 1 cut(s) 391
PspPI GGNCC 7 cut(s) 77, 391, 392, 610, 949, 1004, 1317
PspPPI RGGWCCY 1 cut(s) 949
PstNI CAGNNNCTG 1 cut(s) 723
PsuI RGATCY 2 cut(s) 1216, 1349
RsaI GTAC 2 cut(s) 759, 884
RsaNI GTAC 2 cut(s) 758, 883
SacI GAGCTC 2 cut(s) 559, 1264
SapI GCTCTTC 1 cut(s) 48
SatI GCNGC 3 cut(s) 39, 538, 1359
Sau3AI GATC 8 cut(s) 196, 679, 978, 1216, 1255, 1324, 1349, 1470
Sau96I GGNCC 7 cut(s) 77, 391, 392, 610, 949, 1004, 1317
SchI GAGTC 2 cut(s) 1180, 1208
ScrFI CCNGG 6 cut(s) 57, 337, 396, 1002, 1092, 1159
SduI GDGCHC 5 cut(s) 57, 395, 559, 697, 1264
SfaNI GCATC 3 cut(s) 594, 1096, 1403
SfcI CTRYAG 3 cut(s) 1044, 1362, 1434
SfoI GGCGCC 1 cut(s) 1413
SinI GGWCC 5 cut(s) 77, 610, 949, 1004, 1317
SmlI CTYRAG 2 cut(s) 1025, 1206
SmoI CTYRAG 2 cut(s) 1025, 1206
Sse9I AATT 2 cut(s) 399, 1265
SsiI CCGC 9 cut(s) 25, 38, 236, 246, 538, 751, 802, 1137, 1359
SspDI GGCGCC 1 cut(s) 1411
SspMI CTAG 6 cut(s) 225, 239, 630, 819, 1113, 1385
SstI GAGCTC 2 cut(s) 559, 1264
StyD4I CCNGG 6 cut(s) 55, 335, 394, 1000, 1090, 1157
StyI CCWWGG 9 cut(s) 80, 117, 441, 494, 761, 818, 866, 1112, 1476
TaaI ACNGT 2 cut(s) 944, 1237
TaiI ACGT 1 cut(s) 1255
TaqI TCGA 7 cut(s) 145, 195, 510, 553, 900, 1258, 1272
TasI AATT 2 cut(s) 399, 1265
TauI GCSGC 3 cut(s) 41, 540, 1361
TfiI GAWTC 6 cut(s) 512, 636, 776, 838, 859, 1021
TscAI CASTG 4 cut(s) 417, 490, 676, 1327
TspDTI ATGAA 1 cut(s) 1227
TspRI CASTG 4 cut(s) 417, 490, 676, 1327
VpaK11BI GGWCC 5 cut(s) 77, 610, 949, 1004, 1317
XapI RAATTY 1 cut(s) 399
XceI RCATGY 1 cut(s) 371
XcmI CCANNNNNNNNNTGG 3 cut(s) 169, 724, 751
XmaJI CCTAGG 2 cut(s) 818, 1112
XspI CTAG 6 cut(s) 225, 239, 630, 819, 1113, 1385
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.