Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002769.1

Orthogroup ID

OG0000214

Physical Location & Seq

Genomic Coordinates Forward (+)

55940 .. 59660

Gene Structure 3721 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002769.1_g000013.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1335 bp

atgacaggtgtacccacaatccccggaatagaacgatccctacttacttatattactaacgacatttcagggttaaattatgcgcttgccagtagcgcatcagacatttctgaatctgaccacgattctgtttgtaccgaggaggtggctgcaaatgctgaggctcctatcggtaggacagtcgccccagagatggaaaatgatactgacggtggtggtgcccttcaagtctcccgaataaatgagacaaccgttgtagccgagggctctatgcttgaatctgcttcacttgcccatggtgacccgctagttgagtttccagattctcctacggctgaagggatagaccaacctattgaacatgaagaaactgaggaagctgtccacccttttgcattggtggttcgtgatcctgtggcacctccgccgcctcctcctcctaccagattcgagagattaatgagggtgttggaagtaactcctccttctattgtggatgaggctaagatggtgcttcacgaacatctgggtcctcggttattggagactaacatcctcccgcgagtcttggaagctctaaggtatcttcgccaggagaatgctttgacttcgtggcaatttagtgatatcgattcactgctgaaagaacttggtagggcccgtcgaaatcaaacggcctcgaacgcccaggcttacgactctcaagaggctttgaatagtttttctctagaaatggacatctcccgcgcctttgttgagaatgcgattgctgtagaagaagcccaactcaatgaacctttggctgcttctgaagaaatgggcctcatcctggctcgtgttagagaacgggccactcagggcgaagctagtgccattgcggcgaaactccttgtggaggaactttggcttgttgctgatgacaatgttaccaattggaaacatgaggatcagtatattaactttggatcttctgcaccttcttctgcttcttccgctggtgtgatgattacttttaacgggcagatggggaaatatggcggttatggatctatgaacatggagaagagtgctagggattgttcaatctcagctggaggggaaactagttctactttctttgacatgaatgtagaacaaactttcatggaacaaagaggagaagatcaccaggagattgaaaccctctcactgtttcctgtgcatggtgaggacatctgtggcaacatgaagactacttcccatggaggtggtggtcacggtggtagctctcacacttcccttgagctcaacctttcctacgagggcaaagctggaaaaactttctggagccgctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001763 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0009933 GO:0009987 GO:0010014 GO:0010016 GO:0010223 GO:0010346 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019827 GO:0022412 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048507 GO:0048532 GO:0048608 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0080166 GO:0090506 GO:0090567 GO:0098727 GO:0099402 GO:0140110 GO:1903506 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox

Protein Analysis

444

Amino Acids

48.07

Weight (kDa)

4.5

Isoelectric Point (pI)

43.84

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000214)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr5g0079611
rosa_multiflora	Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii	Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha	Rh3DG208400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	218, 418
AccII	CGCG	2 cut(s)	562, 747
AciI	CCGC	9 cut(s)	305, 425, 428, 560, 745, 878, 993, 1038, 1330
AclWI	GGATC	5 cut(s)	30, 404, 954, 973, 1054
AcuI	CTGAAG	2 cut(s)	357, 831
AfaI	GTAC	2 cut(s)	12, 136
AfiI	CCNNNNNNNGG	4 cut(s)	193, 829, 895, 1202
AgsI	TTSAA	6 cut(s)	227, 278, 359, 715, 1083, 1178
AhlI	ACTAGT	1 cut(s)	1103
AjnI	CCWGG	4 cut(s)	591, 687, 828, 1167
AluBI	AGCT	7 cut(s)	380, 575, 866, 1091, 1266, 1285, 1310
AluI	AGCT	7 cut(s)	380, 575, 866, 1091, 1266, 1285, 1310
Alw21I	GWGCWC	1 cut(s)	1287
Alw26I	GTCTC	3 cut(s)	235, 239, 539
AlwI	GGATC	5 cut(s)	30, 404, 954, 973, 1054
AoxI	GGCC	4 cut(s)	657, 675, 820, 849
ApaI	GGGCCC	1 cut(s)	661
ApeKI	GCWGC	2 cut(s)	149, 803
AseI	ATTAAT	1 cut(s)	458
AspLEI	GCGC	3 cut(s)	85, 98, 749
AspS9I	GGNCC	5 cut(s)	530, 657, 658, 820, 849
AsuC2I	CCSGG	1 cut(s)	24
AsuHPI	GGTGA	3 cut(s)	311, 1157, 1217
AvaII	GGWCC	1 cut(s)	530
BaeGI	GKGCMC	2 cut(s)	223, 661
BaeI	ACNNNNGTAYC	1 cut(s)	27
BanI	GGYRCC	2 cut(s)	218, 418
BanII	GRGCYC	3 cut(s)	269, 661, 1287
BauI	CACGAG	1 cut(s)	834
BbsI	GAAGAC	1 cut(s)	1235
Bbv12I	GWGCWC	1 cut(s)	1287
BbvCI	CCTCAGC	1 cut(s)	159
BbvI	GCAGC	2 cut(s)	136, 790
BccI	CCATC	3 cut(s)	187, 502, 1018
BceAI	ACGGC	2 cut(s)	348, 690
BcgI	CGANNNNNNTGC	2 cut(s)	851, 885
BciT130I	CCWGG	4 cut(s)	593, 689, 830, 1169
BcnI	CCSGG	1 cut(s)	24
BcoDI	GTCTC	3 cut(s)	235, 239, 539
BcuI	ACTAGT	1 cut(s)	1103
BfaI	CTAG	5 cut(s)	308, 728, 867, 1071, 1104
BfmI	CTRYAG	1 cut(s)	771
BglI	GCCNNNNNGGC	1 cut(s)	878
BisI	GCNGC	5 cut(s)	150, 428, 804, 879, 1330
BlsI	GCNGC	5 cut(s)	151, 429, 805, 880, 1331
Bme1390I	CCNGG	5 cut(s)	24, 593, 689, 830, 1169
Bme18I	GGWCC	1 cut(s)	530
BmgT120I	GGNCC	5 cut(s)	530, 657, 658, 820, 849
BmiI	GGNNCC	6 cut(s)	165, 220, 420, 531, 659, 1328
BmrFI	CCNGG	5 cut(s)	24, 593, 689, 830, 1169
BmsI	GCATC	1 cut(s)	107
BpiI	GAAGAC	1 cut(s)	1235
BpmI	CTGGAG	1 cut(s)	1113
Bpu10I	CCTNAGC	1 cut(s)	159
BpuEI	CTTGAG	2 cut(s)	687, 1301
BpuMI	CCSGG	1 cut(s)	24
Bsa29I	ATCGAT	1 cut(s)	630
BsaJI	CCNNGG	7 cut(s)	22, 138, 261, 295, 533, 687, 1240
Bsc4I	CCNNNNNNNGG	4 cut(s)	193, 829, 895, 1202
Bse1I	ACTGG	1 cut(s)	90
Bse3DI	GCAATG	1 cut(s)	873
BseBI	CCWGG	4 cut(s)	593, 689, 830, 1169
BseCI	ATCGAT	1 cut(s)	630
BseDI	CCNNGG	7 cut(s)	22, 138, 261, 295, 533, 687, 1240
BseGI	GGATG	3 cut(s)	502, 552, 825
BseLI	CCNNNNNNNGG	4 cut(s)	193, 829, 895, 1202
BseMI	GCAATG	1 cut(s)	873
BseMII	CTCAG	4 cut(s)	150, 363, 869, 1101
BseNI	ACTGG	1 cut(s)	90
BseRI	GAGGAG	5 cut(s)	155, 423, 426, 471, 1170
BseSI	GKGCMC	2 cut(s)	223, 661
BseXI	GCAGC	2 cut(s)	136, 790
BsgI	GTGCAG	1 cut(s)	957
Bsh1236I	CGCG	2 cut(s)	562, 747
BshFI	GGCC	4 cut(s)	659, 677, 822, 851
BshNI	GGYRCC	2 cut(s)	218, 418
BshVI	ATCGAT	1 cut(s)	630
BsiHKAI	GWGCWC	1 cut(s)	1287
BsiSI	CCGG	1 cut(s)	24
BslI	CCNNNNNNNGG	4 cut(s)	193, 829, 895, 1202
BsmAI	GTCTC	3 cut(s)	235, 239, 539
BsmI	GAATGC	2 cut(s)	604, 766
BsnI	GGCC	4 cut(s)	659, 677, 822, 851
Bsp120I	GGGCCC	1 cut(s)	657
Bsp1286I	GDGCHC	4 cut(s)	223, 269, 661, 1287
Bsp143I	GATC	6 cut(s)	35, 409, 946, 965, 1046, 1162
Bsp19I	CCATGG	2 cut(s)	295, 1240
BspACI	CCGC	9 cut(s)	305, 425, 428, 560, 745, 878, 993, 1038, 1330
BspANI	GGCC	4 cut(s)	659, 677, 822, 851
BspCNI	CTCAG	4 cut(s)	151, 364, 868, 1100
BspDI	ATCGAT	1 cut(s)	630
BspFNI	CGCG	2 cut(s)	562, 747
BspLI	GGNNCC	6 cut(s)	165, 220, 420, 531, 659, 1328
BspPI	GGATC	5 cut(s)	30, 404, 954, 973, 1054
BspT107I	GGYRCC	2 cut(s)	218, 418
BsrDI	GCAATG	1 cut(s)	873
BsrI	ACTGG	1 cut(s)	90
BssECI	CCNNGG	7 cut(s)	22, 138, 261, 295, 533, 687, 1240
BssMI	GATC	6 cut(s)	35, 409, 946, 965, 1046, 1162
BssSI	CACGAG	1 cut(s)	834
BssT1I	CCWWGG	2 cut(s)	295, 1240
Bst2BI	CACGAG	1 cut(s)	834
Bst2UI	CCWGG	4 cut(s)	593, 689, 830, 1169
Bst4CI	ACNGT	5 cut(s)	181, 212, 253, 1191, 1259
Bst6I	CTCTTC	1 cut(s)	1058
BstC8I	GCNNGC	1 cut(s)	87
BstDEI	CTNAG	6 cut(s)	159, 372, 504, 578, 855, 1087
BstDSI	CCRYGG	2 cut(s)	295, 1240
BstEII	GGTNACC	1 cut(s)	299
BstENI	CCTNNNNNAGG	1 cut(s)	893
BstF5I	GGATG	3 cut(s)	502, 552, 825
BstFNI	CGCG	2 cut(s)	562, 747
BstHHI	GCGC	3 cut(s)	85, 98, 749
BstKTI	GATC	6 cut(s)	38, 412, 949, 968, 1049, 1165
BstMAI	GTCTC	3 cut(s)	235, 239, 539
BstMBI	GATC	6 cut(s)	35, 409, 946, 965, 1046, 1162
BstMWI	GCNNNNNNNGC	6 cut(s)	95, 155, 290, 683, 878, 992
BstNI	CCWGG	4 cut(s)	593, 689, 830, 1169
BstPI	GGTNACC	1 cut(s)	299
BstSCI	CCNGG	5 cut(s)	22, 591, 687, 828, 1167
BstSFI	CTRYAG	1 cut(s)	771
BstSLI	GKGCMC	2 cut(s)	223, 661
BstUI	CGCG	2 cut(s)	562, 747
BstV1I	GCAGC	2 cut(s)	136, 790
BstV2I	GAAGAC	1 cut(s)	1235
BstX2I	RGATCY	2 cut(s)	965, 1046
BstXI	CCANNNNNNTGG	1 cut(s)	1247
BstYI	RGATCY	2 cut(s)	965, 1046
Bsu15I	ATCGAT	1 cut(s)	630
BsuRI	GGCC	4 cut(s)	659, 677, 822, 851
BsuTUI	ATCGAT	1 cut(s)	630
BtgI	CCRYGG	2 cut(s)	295, 1240
BtsCI	GGATG	3 cut(s)	502, 552, 825
BtsI	GCAGTG	1 cut(s)	635
BtsIMutI	CAGTG	2 cut(s)	635, 1187
Cac8I	GCNNGC	1 cut(s)	87
CfoI	GCGC	3 cut(s)	85, 98, 749
Cfr13I	GGNCC	5 cut(s)	530, 657, 658, 820, 849
ClaI	ATCGAT	1 cut(s)	630
Csp6I	GTAC	2 cut(s)	11, 135
CviAII	CATG	9 cut(s)	296, 362, 941, 1057, 1123, 1144, 1202, 1225, 1241
CviQI	GTAC	2 cut(s)	11, 135
DdeI	CTNAG	6 cut(s)	159, 372, 504, 578, 855, 1087
DpnI	GATC	6 cut(s)	37, 411, 948, 967, 1048, 1164
DpnII	GATC	6 cut(s)	35, 409, 946, 965, 1046, 1162
Eam1104I	CTCTTC	1 cut(s)	1058
EarI	CTCTTC	1 cut(s)	1058
EciI	GGCGGA	1 cut(s)	414
Ecl136II	GAGCTC	1 cut(s)	1285
Eco130I	CCWWGG	2 cut(s)	295, 1240
Eco24I	GRGCYC	3 cut(s)	269, 661, 1287
Eco32I	GATATC	1 cut(s)	628
Eco47I	GGWCC	1 cut(s)	530
Eco53kI	GAGCTC	1 cut(s)	1285
Eco57I	CTGAAG	2 cut(s)	357, 831
Eco91I	GGTNACC	1 cut(s)	299
EcoICRI	GAGCTC	1 cut(s)	1285
EcoNI	CCTNNNNNAGG	1 cut(s)	893
EcoO109I	RGGNCCY	2 cut(s)	530, 657
EcoO65I	GGTNACC	1 cut(s)	299
EcoRII	CCWGG	4 cut(s)	591, 687, 828, 1167
EcoRV	GATATC	1 cut(s)	628
EcoT14I	CCWWGG	2 cut(s)	295, 1240
EcoT38I	GRGCYC	3 cut(s)	269, 661, 1287
ErhI	CCWWGG	2 cut(s)	295, 1240
FaeI	CATG	9 cut(s)	299, 365, 944, 1060, 1126, 1147, 1205, 1228, 1244
FatI	CATG	9 cut(s)	295, 361, 940, 1056, 1122, 1143, 1201, 1224, 1240
FauI	CCCGC	3 cut(s)	312, 567, 752
Fnu4HI	GCNGC	5 cut(s)	150, 428, 804, 879, 1330
FokI	GGATG	3 cut(s)	509, 539, 812
FriOI	GRGCYC	3 cut(s)	269, 661, 1287
Fsp4HI	GCNGC	5 cut(s)	150, 428, 804, 879, 1330
FspBI	CTAG	5 cut(s)	308, 728, 867, 1071, 1104
GlaI	GCGC	3 cut(s)	84, 97, 748
GluI	GCNGC	5 cut(s)	150, 428, 804, 879, 1330
GsuI	CTGGAG	1 cut(s)	1113
HaeIII	GGCC	4 cut(s)	659, 677, 822, 851
HapII	CCGG	1 cut(s)	24
HhaI	GCGC	3 cut(s)	85, 98, 749
Hin1II	CATG	9 cut(s)	299, 365, 944, 1060, 1126, 1147, 1205, 1228, 1244
Hin6I	GCGC	3 cut(s)	83, 96, 747
HinP1I	GCGC	3 cut(s)	83, 96, 747
HinfI	GANTC	8 cut(s)	113, 125, 278, 323, 447, 564, 632, 698
HpaII	CCGG	1 cut(s)	24
HphI	GGTGA	3 cut(s)	311, 1157, 1217
Hpy166II	GTNNAC	2 cut(s)	11, 385
Hpy188I	TCNGA	4 cut(s)	103, 112, 118, 811
Hpy188III	TCNNGA	8 cut(s)	234, 320, 407, 451, 518, 704, 728, 1324
Hpy8I	GTNNAC	2 cut(s)	11, 385
Hpy99I	CGWCG	1 cut(s)	666
HpyAV	CCTTC	4 cut(s)	233, 332, 495, 987
HpyCH4III	ACNGT	5 cut(s)	181, 212, 253, 1191, 1259
HpyCH4V	TGCA	4 cut(s)	152, 395, 974, 1201
HpyF10VI	GCNNNNNNNGC	6 cut(s)	95, 155, 290, 683, 878, 992
HpyF3I	CTNAG	6 cut(s)	159, 372, 504, 578, 855, 1087
Hsp92II	CATG	9 cut(s)	299, 365, 944, 1060, 1126, 1147, 1205, 1228, 1244
HspAI	GCGC	3 cut(s)	83, 96, 747
Kzo9I	GATC	6 cut(s)	35, 409, 946, 965, 1046, 1162
LmnI	GCTCC	2 cut(s)	169, 1326
Lsp1109I	GCAGC	2 cut(s)	136, 790
LweI	GCATC	1 cut(s)	107
MaeI	CTAG	5 cut(s)	308, 728, 867, 1071, 1104
MaeIII	GTNAC	4 cut(s)	299, 475, 925, 1253
MalI	GATC	6 cut(s)	37, 411, 948, 967, 1048, 1164
MboI	GATC	6 cut(s)	35, 409, 946, 965, 1046, 1162
MfeI	CAATTG	1 cut(s)	931
MflI	RGATCY	2 cut(s)	965, 1046
MhlI	GDGCHC	4 cut(s)	223, 269, 661, 1287
MluCI	AATT	3 cut(s)	76, 617, 931
MlyI	GAGTC	2 cut(s)	573, 692
MmeI	TCCRAC	1 cut(s)	450
MseI	TTAA	4 cut(s)	74, 458, 957, 1014
MslI	CAYNNNNRTG	1 cut(s)	1245
MspA1I	CMGCKG	3 cut(s)	995, 1091, 1332
MspI	CCGG	1 cut(s)	24
MspR9I	CCNGG	5 cut(s)	24, 593, 689, 830, 1169
MunI	CAATTG	1 cut(s)	931
Mva1269I	GAATGC	2 cut(s)	604, 766
MvaI	CCWGG	4 cut(s)	593, 689, 830, 1169
MvnI	CGCG	2 cut(s)	562, 747
MwoI	GCNNNNNNNGC	6 cut(s)	95, 155, 290, 683, 878, 992
NciI	CCSGG	1 cut(s)	24
NcoI	CCATGG	2 cut(s)	295, 1240
NdeII	GATC	6 cut(s)	35, 409, 946, 965, 1046, 1162
NlaIII	CATG	9 cut(s)	299, 365, 944, 1060, 1126, 1147, 1205, 1228, 1244
NlaIV	GGNNCC	6 cut(s)	165, 220, 420, 531, 659, 1328
NmeAIII	GCCGAG	1 cut(s)	286
NmuCI	GTSAC	2 cut(s)	299, 1253
PctI	GAATGC	2 cut(s)	604, 766
PfeI	GAWTC	6 cut(s)	113, 125, 278, 323, 447, 632
PkrI	GCNGC	5 cut(s)	151, 429, 805, 880, 1331
PleI	GAGTC	2 cut(s)	572, 692
PpsI	GAGTC	2 cut(s)	572, 692
PpuMI	RGGWCCY	1 cut(s)	530
PshBI	ATTAAT	1 cut(s)	458
Psp124BI	GAGCTC	1 cut(s)	1287
Psp5II	RGGWCCY	1 cut(s)	530
Psp6I	CCWGG	4 cut(s)	591, 687, 828, 1167
PspEI	GGTNACC	1 cut(s)	299
PspGI	CCWGG	4 cut(s)	591, 687, 828, 1167
PspN4I	GGNNCC	6 cut(s)	165, 220, 420, 531, 659, 1328
PspOMI	GGGCCC	1 cut(s)	657
PspPI	GGNCC	5 cut(s)	530, 657, 658, 820, 849
PspPPI	RGGWCCY	1 cut(s)	530
PsrI	GAACNNNNNNTAC	2 cut(s)	24, 56
PsuI	RGATCY	2 cut(s)	965, 1046
PvuII	CAGCTG	1 cut(s)	1091
RsaI	GTAC	2 cut(s)	12, 136
RsaNI	GTAC	2 cut(s)	11, 135
RseI	CAYNNNNRTG	1 cut(s)	1245
SacI	GAGCTC	1 cut(s)	1287
SaqAI	TTAA	4 cut(s)	74, 458, 957, 1014
SatI	GCNGC	5 cut(s)	150, 428, 804, 879, 1330
Sau3AI	GATC	6 cut(s)	35, 409, 946, 965, 1046, 1162
Sau96I	GGNCC	5 cut(s)	530, 657, 658, 820, 849
SchI	GAGTC	2 cut(s)	573, 692
ScrFI	CCNGG	5 cut(s)	24, 593, 689, 830, 1169
SduI	GDGCHC	4 cut(s)	223, 269, 661, 1287
SfaNI	GCATC	1 cut(s)	107
SfcI	CTRYAG	1 cut(s)	771
SinI	GGWCC	1 cut(s)	530
SmiMI	CAYNNNNRTG	1 cut(s)	1245
SmlI	CTYRAG	2 cut(s)	702, 1280
SmoI	CTYRAG	2 cut(s)	702, 1280
SpeI	ACTAGT	1 cut(s)	1103
Sse9I	AATT	3 cut(s)	76, 617, 931
SsiI	CCGC	9 cut(s)	305, 425, 428, 560, 745, 878, 993, 1038, 1330
SspMI	CTAG	5 cut(s)	308, 728, 867, 1071, 1104
SstI	GAGCTC	1 cut(s)	1287
StyD4I	CCNGG	5 cut(s)	22, 591, 687, 828, 1167
StyI	CCWWGG	2 cut(s)	295, 1240
TaaI	ACNGT	5 cut(s)	181, 212, 253, 1191, 1259
TaqI	TCGA	4 cut(s)	450, 630, 664, 680
TasI	AATT	3 cut(s)	76, 617, 931
TauI	GCSGC	3 cut(s)	430, 881, 1332
TfiI	GAWTC	6 cut(s)	113, 125, 278, 323, 447, 632
Tru1I	TTAA	4 cut(s)	74, 458, 957, 1014
Tru9I	TTAA	4 cut(s)	74, 458, 957, 1014
TscAI	CASTG	2 cut(s)	642, 1194
TseFI	GTSAC	2 cut(s)	299, 1253
TseI	GCWGC	2 cut(s)	149, 803
Tsp45I	GTSAC	2 cut(s)	299, 1253
TspDTI	ATGAA	6 cut(s)	378, 807, 1067, 1132, 1139, 1241
TspRI	CASTG	2 cut(s)	642, 1194
VpaK11BI	GGWCC	1 cut(s)	530
VspI	ATTAAT	1 cut(s)	458
XagI	CCTNNNNNAGG	1 cut(s)	893
XbaI	TCTAGA	1 cut(s)	727
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1247
XspI	CTAG	5 cut(s)	308, 728, 867, 1071, 1104

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.