Rmu_sc0004085.1_g000010

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004085.1
OG0000214
Physical Location & Seq
Reverse (-)
13891 .. 16895
3005 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004085.1_g000010.1.cds

Sequence Viewer

Length: 2709 bp
atgggctttggtggcagtgatagtcaagcgagtctgggtcccacacctcgcgatcgtttgccagatgatgctatagcctattatgggcttcccatccgccgtcccatagcggctcttcggcaagtgcctggcgattttagcagttggggaccaaggaggaaagtgggcttctggcctactgtcactaccgaggaaaaagtttggtatcaggaggtccgagcgagagatttggaccgatgggaagaggttggtatcacccaaaccatcgatctatgcttctgtcttccccataatactagccctgcaccgctagccaccgctctttgcttctggaacacctccagcagtacattcgatttccggtttgggcagatgagcataactctgctggatgttcttaccatcacggggttgcccattgtcaatttgatgggattcaattttctagatgatggctttctgcccagtggacgggatcatagtgaaagagccctcctggcctttcgtcgcgccatctcctgcttggatattcgtcttaccactgattgcgtaagttatgagctctatgcccctaaccacttcgctcgccaatttgggttggcccagttggtaccctggcctctggttgattctgcctattactacacctcttggcggagattagcggacccaaaaatagtcctttctaggcgtttccctcctccccttgatgatggctttctgcccagtggacgggatcatagtgaaagagccctcctggcctttcgtcgcgccatctcctgcttggatattcgtcttaccactgattgcgtaagttacaagctctacgcctctaaccactttgctcgccaatttgggttggcccagttggtaccctggcctgtggttgattctgccaattattacacctcttggcggagattagccccacctgggtctgccccctttcagagtcagtttactttgatagtgattcccccttgggtcacagcgctataccccctcaacgatgtcgatgatgactatgctgattggtggaaaaaagtgtcagtgaactgttgggacctgccacatgacgaactcttcgtcctgatctttcgtggcatgagtagccctggtctggaggaccgcgagattcttgagcgcttctccaaacctgcagaacaacccccgcgacctattctacattctcactcattgcgtccagggatacaaatccacgagcctagggcaacacaaactacccggagcaggacagcctctgttcaggccgggaaacaaaaggcaatagcagaggagacttctgagggagaatcttcacatgatgaagatcctgctgaggccactgctgtctttgcttgcaaacgcgataggtctcaatccgtcgaagagagttttgaagatgatgacccctctgggaatgcgattgaagagccatttatctcgctagttcaagcatcaactaaccctgtggcacctctcccatctcccactatagagcatctgcaaggtcctaccattctaataacgatctctgatgacgactcctcggaggatgaaagcgtggaaagccactctgaggcttctactgcttatgaggaactgatgacgacagatattctagcggcactagaggtccaagaggtgaatgaggcggggcctattcctcttggtgaccacgtaccagatatcgacccgacagctcgagaggtaagccactgtttggccattactttccatttccctttagatccaaccctgctctctgacatttctgaatctgaccaggattctgtttgtaccaaggaggtggcaacaaacattgagggtcctatcggcgggacagtcgccccagagatggaaaatgatactaacggtggtggtgccccccaagtctcgcaaacaaatgagacaaacgtcgaagctgagggttctgtgcttgaatctgctccacttgcccatggtgagccgcgagttgagtttccagattcccctgaggctgaagggacagaccaacctgttgaagatgaagaaactgaggaggctgtccacccttttgcattagtggttcgtgatcctgtatcgcctctgccgcctcctcctcctaccagatttgatagattgatgagggtgttggaggtaactcctccttctgctgtggatgaggctaagatggtacttcacgaacatctgggtcctcagcctcctaccagattcgagagattgatgagggtgttggaggtaactcttccttctactatggatgaggctaagatggtgcttcacgaacatctgggccctcaggtattggagactgacatcctcccgcgagtcttggaagctctaaggtatcttcgccaggagaaggttttgactctgtgtcaatttagtgctatcgactctctgctaaatgaacttgatatggcccgccgacgtcaatcggccgcgaacacccaggctcgggatgctcaagaggttttgaatagtgtctctcgagaaatggacatctctcgcgatattttaaatgaacgatccatccgcctgcgggaactacaaatccaaaggtccgacttcaaacttcaaatcaaggacctccaagccgatttagcctttgttgagaatgcgattgttgcagaagaagctcaactcgatgagcctttggctgcttctgaagaaatgggccgcaacctggcccgtatcagagattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

902

Amino Acids

100.63

Weight (kDa)

4.65

Isoelectric Point (pI)

55.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000214)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0079611
rosa_multiflora Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha Rh3DG208400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2437
Acc36I ACCTGC 2 cut(s) 1074, 1165
Acc65I GGTACC 2 cut(s) 610, 871
AccB1I GGYRCC 4 cut(s) 610, 871, 1474, 1883
AccB7I CCANNNNNTGG 1 cut(s) 1723
AccBSI CCGCTC 1 cut(s) 320
AclWI GGATC 6 cut(s) 483, 744, 1325, 1745, 2069, 2526
AcoI YGGCCR 2 cut(s) 1725, 2442
AcuI CTGAAG 2 cut(s) 2022, 2691
AcyI GRCGYC 1 cut(s) 2434
AfaI GTAC 6 cut(s) 349, 612, 873, 1683, 1801, 2178
AfeI AGCGCT 2 cut(s) 993, 1145
AgsI TTSAA 9 cut(s) 439, 1400, 1430, 1454, 1943, 2024, 2482, 2575, 2582
AhdI GACNNNNNGTC 1 cut(s) 2379
AloI GAACNNNNNNTCC 6 cut(s) 1071, 1103, 2520, 2541, 2552, 2573
AluBI AGCT 6 cut(s) 562, 823, 1703, 1925, 2342, 2642
AluI AGCT 6 cut(s) 562, 823, 1703, 1925, 2342, 2642
Alw21I GWGCWC 1 cut(s) 564
Alw26I GTCTC 6 cut(s) 1292, 1380, 1900, 1904, 2306, 2494
AlwI GGATC 6 cut(s) 483, 744, 1325, 1745, 2069, 2526
AlwNI CAGNNNCTG 1 cut(s) 1262
Ama87I CYCGRG 3 cut(s) 1704, 2460, 2493
Aor51HI AGCGCT 2 cut(s) 993, 1145
ApaI GGGCCC 1 cut(s) 2300
ApeKI GCWGC 1 cut(s) 2663
ArsI GACNNNNNNTTYG 4 cut(s) 1067, 1071, 1099, 1103
Asp718I GGTACC 2 cut(s) 610, 871
AspA2I CCTAGG 1 cut(s) 1226
AspLEI GCGC 4 cut(s) 512, 773, 994, 1146
AsuC2I CCSGG 2 cut(s) 1246, 1273
AsuHPI GGTGA 4 cut(s) 247, 1657, 1685, 1976
AsuNHI GCTAGC 1 cut(s) 310
AvaI CYCGRG 3 cut(s) 1704, 2460, 2493
AvrII CCTAGG 1 cut(s) 1226
AxyI CCTNAGG 2 cut(s) 1995, 2301
BaeGI GKGCMC 2 cut(s) 1888, 2300
BalI TGGCCA 1 cut(s) 1727
BanI GGYRCC 4 cut(s) 610, 871, 1474, 1883
BanII GRGCYC 4 cut(s) 493, 564, 754, 2300
BauI CACGAG 1 cut(s) 1220
BbsI GAAGAC 1 cut(s) 275
Bbv12I GWGCWC 1 cut(s) 564
BbvCI CCTCAGC 3 cut(s) 1338, 1926, 2199
BbvI GCAGC 1 cut(s) 2650
BceAI ACGGC 1 cut(s) 84
BcgI CGANNNNNNTGC 2 cut(s) 334, 368
BciVI GTATCC 1 cut(s) 1203
BcnI CCSGG 2 cut(s) 1246, 1273
BcoDI GTCTC 6 cut(s) 1292, 1380, 1900, 1904, 2306, 2494
BfaI CTAG 8 cut(s) 297, 311, 446, 687, 1227, 1448, 1622, 1631
BfmI CTRYAG 3 cut(s) 72, 1158, 1494
BfoI RGCGCY 2 cut(s) 995, 1147
BfuAI ACCTGC 2 cut(s) 1074, 1165
BfuI GTATCC 1 cut(s) 1203
BglI GCCNNNNNGGC 2 cut(s) 497, 758
BisI GCNGC 7 cut(s) 111, 1626, 1970, 2093, 2445, 2664, 2683
BlnI CCTAGG 1 cut(s) 1226
BlsI GCNGC 7 cut(s) 112, 1627, 1971, 2094, 2446, 2665, 2684
BmeRI GACNNNNNGTC 1 cut(s) 2379
BmeT110I CYCGRG 3 cut(s) 1704, 2460, 2493
BmrI ACTGGG 4 cut(s) 459, 598, 720, 859
BmsI GCATC 4 cut(s) 58, 1466, 1510, 2455
BmtI GCTAGC 1 cut(s) 314
BmuI ACTGGG 4 cut(s) 459, 598, 720, 859
BoxI GACNNNNGTC 1 cut(s) 1916
BpiI GAAGAC 1 cut(s) 275
BplI GAGNNNNNCTC 4 cut(s) 367, 399, 1133, 1165
BpmI CTGGAG 2 cut(s) 325, 1142
Bpu10I CCTNAGC 3 cut(s) 1338, 1926, 2199
BpuEI CTTGAG 2 cut(s) 1160, 2454
BpuMI CCSGG 2 cut(s) 1246, 1273
Bsa29I ATCGAT 1 cut(s) 267
BsaAI YACGTR 1 cut(s) 1681
BsaBI GATNNNNATC 2 cut(s) 1214, 1329
BsaHI GRCGYC 1 cut(s) 2434
BsaI GGTCTC 1 cut(s) 1380
BsaWI WCCGGW 1 cut(s) 360
Bse1I ACTGG 4 cut(s) 465, 604, 726, 865
Bse21I CCTNAGG 2 cut(s) 1995, 2301
Bse3DI GCAATG 1 cut(s) 1196
Bse8I GATNNNNATC 2 cut(s) 1214, 1329
BseCI ATCGAT 1 cut(s) 267
BseGI GGATG 8 cut(s) 93, 397, 1561, 2167, 2269, 2319, 2470, 2535
BseJI GATNNNNATC 2 cut(s) 1214, 1329
BseMI GCAATG 1 cut(s) 1196
BseMII CTCAG 8 cut(s) 1296, 1329, 1569, 1917, 1986, 2028, 2213, 2315
BseNI ACTGG 4 cut(s) 465, 604, 726, 865
BseRI GAGGAG 7 cut(s) 690, 1310, 1537, 2054, 2088, 2091, 2136
BseSI GKGCMC 2 cut(s) 1888, 2300
BseX3I CGGCCG 1 cut(s) 2442
BseXI GCAGC 1 cut(s) 2650
BsgI GTGCAG 1 cut(s) 288
Bsh1285I CGRYCG 2 cut(s) 55, 2445
BshNI GGYRCC 4 cut(s) 610, 871, 1474, 1883
BshVI ATCGAT 1 cut(s) 267
BsiEI CGRYCG 2 cut(s) 55, 2445
BsiHKAI GWGCWC 1 cut(s) 564
BsiHKCI CYCGRG 3 cut(s) 1704, 2460, 2493
BsiSI CCGG 3 cut(s) 361, 1246, 1272
BslFI GGGAC 6 cut(s) 24, 87, 162, 1076, 1855, 2020
BsmAI GTCTC 6 cut(s) 1292, 1380, 1900, 1904, 2306, 2494
BsmFI GGGAC 6 cut(s) 24, 87, 162, 1076, 1855, 2020
BsmI GAATGC 2 cut(s) 1426, 2626
Bso31I GGTCTC 1 cut(s) 1380
BsoBI CYCGRG 3 cut(s) 1704, 2460, 2493
Bsp120I GGGCCC 1 cut(s) 2296
Bsp1286I GDGCHC 5 cut(s) 493, 564, 754, 1888, 2300
Bsp19I CCATGG 1 cut(s) 1960
Bsp68I TCGCGA 2 cut(s) 51, 2514
BspCNI CTCAG 8 cut(s) 1297, 1330, 1570, 1918, 1987, 2029, 2212, 2314
BspDI ATCGAT 1 cut(s) 267
BspMAI CTGCAG 1 cut(s) 1162
BspMI ACCTGC 2 cut(s) 1074, 1165
BspOI GCTAGC 1 cut(s) 314
BspPI GGATC 6 cut(s) 483, 744, 1325, 1745, 2069, 2526
BspQI GCTCTTC 2 cut(s) 120, 1425
BspT107I GGYRCC 4 cut(s) 610, 871, 1474, 1883
BspTNI GGTCTC 1 cut(s) 1380
BsrBI CCGCTC 1 cut(s) 320
BsrDI GCAATG 1 cut(s) 1196
BsrI ACTGG 4 cut(s) 465, 604, 726, 865
BssNI GRCGYC 1 cut(s) 2434
BssSI CACGAG 1 cut(s) 1220
BssT1I CCWWGG 5 cut(s) 152, 980, 1226, 1803, 1960
Bst2BI CACGAG 1 cut(s) 1220
Bst4CI ACNGT 5 cut(s) 181, 1058, 1721, 1846, 1877
Bst6I CTCTTC 6 cut(s) 120, 237, 1088, 1383, 1425, 2253
BstACI GRCGYC 1 cut(s) 2434
BstBAI YACGTR 1 cut(s) 1681
BstC8I GCNNGC 6 cut(s) 312, 586, 847, 1360, 2428, 2543
BstDSI CCRYGG 1 cut(s) 1960
BstEII GGTNACC 1 cut(s) 1673
BstF5I GGATG 8 cut(s) 93, 397, 1561, 2167, 2269, 2319, 2470, 2535
BstH2I RGCGCY 2 cut(s) 995, 1147
BstHHI GCGC 4 cut(s) 512, 773, 994, 1146
BstMAI GTCTC 6 cut(s) 1292, 1380, 1900, 1904, 2306, 2494
BstMCI CGRYCG 2 cut(s) 55, 2445
BstPAI GACNNNNGTC 1 cut(s) 1916
BstPI GGTNACC 1 cut(s) 1673
BstSFI CTRYAG 3 cut(s) 72, 1158, 1494
BstSLI GKGCMC 2 cut(s) 1888, 2300
BstV1I GCAGC 1 cut(s) 2650
BstV2I GAAGAC 1 cut(s) 275
BstX2I RGATCY 2 cut(s) 1330, 1750
BstXI CCANNNNNNTGG 1 cut(s) 1810
BstYI RGATCY 2 cut(s) 1330, 1750
BstZI CGGCCG 1 cut(s) 2442
Bsu15I ATCGAT 1 cut(s) 267
Bsu36I CCTNAGG 2 cut(s) 1995, 2301
BsuI GTATCC 1 cut(s) 1203
BsuTUI ATCGAT 1 cut(s) 267
BtgI CCRYGG 1 cut(s) 1960
BtsCI GGATG 8 cut(s) 93, 397, 1561, 2167, 2269, 2319, 2470, 2535
BtsI GCAGTG 2 cut(s) 22, 1344
BtsIMutI CAGTG 8 cut(s) 22, 472, 540, 733, 801, 1056, 1344, 1717
BtuMI TCGCGA 2 cut(s) 51, 2514
BveI ACCTGC 2 cut(s) 1074, 1165
Cac8I GCNNGC 6 cut(s) 312, 586, 847, 1360, 2428, 2543
CaiI CAGNNNCTG 1 cut(s) 1262
CfoI GCGC 4 cut(s) 512, 773, 994, 1146
ClaI ATCGAT 1 cut(s) 267
CseI GACGC 1 cut(s) 1190
Csp6I GTAC 6 cut(s) 348, 611, 872, 1682, 1800, 2177
CviAII CATG 4 cut(s) 1073, 1105, 1322, 1961
CviQI GTAC 6 cut(s) 348, 611, 872, 1682, 1800, 2177
DraI TTTAAA 1 cut(s) 2523
DriI GACNNNNNGTC 1 cut(s) 2379
EaeI YGGCCR 2 cut(s) 1725, 2442
EagI CGGCCG 1 cut(s) 2442
Eam1104I CTCTTC 6 cut(s) 120, 237, 1088, 1383, 1425, 2253
Eam1105I GACNNNNNGTC 1 cut(s) 2379
EarI CTCTTC 6 cut(s) 120, 237, 1088, 1383, 1425, 2253
EciI GGCGGA 4 cut(s) 86, 670, 931, 2528
Ecl136II GAGCTC 1 cut(s) 562
EclXI CGGCCG 1 cut(s) 2442
Eco130I CCWWGG 5 cut(s) 152, 980, 1226, 1803, 1960
Eco24I GRGCYC 4 cut(s) 493, 564, 754, 2300
Eco31I GGTCTC 1 cut(s) 1380
Eco32I GATATC 1 cut(s) 1690
Eco47III AGCGCT 2 cut(s) 993, 1145
Eco52I CGGCCG 1 cut(s) 2442
Eco53kI GAGCTC 1 cut(s) 562
Eco57I CTGAAG 2 cut(s) 2022, 2691
Eco81I CCTNAGG 2 cut(s) 1995, 2301
Eco88I CYCGRG 3 cut(s) 1704, 2460, 2493
Eco91I GGTNACC 1 cut(s) 1673
EcoICRI GAGCTC 1 cut(s) 562
EcoO109I RGGNCCY 8 cut(s) 38, 1063, 1511, 1658, 1829, 2195, 2297, 2590
EcoO65I GGTNACC 1 cut(s) 1673
EcoRV GATATC 1 cut(s) 1690
EcoT14I CCWWGG 5 cut(s) 152, 980, 1226, 1803, 1960
EcoT38I GRGCYC 4 cut(s) 493, 564, 754, 2300
ErhI CCWWGG 5 cut(s) 152, 980, 1226, 1803, 1960
FaeI CATG 4 cut(s) 1076, 1108, 1325, 1964
FaqI GGGAC 6 cut(s) 24, 87, 162, 1076, 1855, 2020
FatI CATG 4 cut(s) 1072, 1104, 1321, 1960
FauI CCCGC 6 cut(s) 1179, 1648, 1832, 2334, 2435, 2538
Fnu4HI GCNGC 7 cut(s) 111, 1626, 1970, 2093, 2445, 2664, 2683
FokI GGATG 8 cut(s) 80, 404, 1568, 2174, 2276, 2306, 2477, 2522
FriOI GRGCYC 4 cut(s) 493, 564, 754, 2300
Fsp4HI GCNGC 7 cut(s) 111, 1626, 1970, 2093, 2445, 2664, 2683
FspBI CTAG 8 cut(s) 297, 311, 446, 687, 1227, 1448, 1622, 1631
GlaI GCGC 4 cut(s) 511, 772, 993, 1145
GluI GCNGC 7 cut(s) 111, 1626, 1970, 2093, 2445, 2664, 2683
GsuI CTGGAG 2 cut(s) 325, 1142
HaeII RGCGCY 2 cut(s) 995, 1147
HapII CCGG 3 cut(s) 361, 1246, 1272
HgaI GACGC 1 cut(s) 1190
HhaI GCGC 4 cut(s) 512, 773, 994, 1146
Hin1I GRCGYC 1 cut(s) 2434
Hin1II CATG 4 cut(s) 1076, 1108, 1325, 1964
Hin6I GCGC 4 cut(s) 510, 771, 992, 1144
HinP1I GCGC 4 cut(s) 510, 771, 992, 1144
HpaII CCGG 3 cut(s) 361, 1246, 1272
HphI GGTGA 4 cut(s) 247, 1657, 1685, 1976
Hpy166II GTNNAC 5 cut(s) 470, 731, 960, 1054, 2050
Hpy8I GTNNAC 5 cut(s) 470, 731, 960, 1054, 2050
Hpy99I CGWCG 5 cut(s) 510, 771, 1388, 1922, 2436
HpyAV CCTTC 4 cut(s) 1997, 2160, 2262, 2359
HpyCH4III ACNGT 5 cut(s) 181, 1058, 1721, 1846, 1877
HpyCH4IV ACGT 3 cut(s) 1680, 1917, 2434
HpyCH4V TGCA 6 cut(s) 305, 1160, 1362, 1507, 2060, 2633
HpySE526I ACGT 3 cut(s) 1680, 1917, 2434
Hsp92I GRCGYC 1 cut(s) 2434
Hsp92II CATG 4 cut(s) 1076, 1108, 1325, 1964
HspAI GCGC 4 cut(s) 510, 771, 992, 1144
KflI GGGWCCC 1 cut(s) 38
KpnI GGTACC 2 cut(s) 614, 875
LguI GCTCTTC 2 cut(s) 120, 1425
LmnI GCTCC 2 cut(s) 1248, 1954
Lsp1109I GCAGC 1 cut(s) 2650
LweI GCATC 4 cut(s) 58, 1466, 1510, 2455
MaeI CTAG 8 cut(s) 297, 311, 446, 687, 1227, 1448, 1622, 1631
MaeII ACGT 3 cut(s) 1680, 1917, 2434
MaeIII GTNAC 6 cut(s) 181, 815, 985, 1673, 2140, 2242
MbiI CCGCTC 1 cut(s) 320
MflI RGATCY 2 cut(s) 1330, 1750
MhlI GDGCHC 5 cut(s) 493, 564, 754, 1888, 2300
MlsI TGGCCA 1 cut(s) 1727
MluCI AATT 6 cut(s) 424, 439, 590, 851, 898, 2384
MluNI TGGCCA 1 cut(s) 1727
MlyI GAGTC 6 cut(s) 40, 961, 1538, 2340, 2368, 2393
MmeI TCCRAC 4 cut(s) 1778, 2115, 2217, 2592
Mox20I TGGCCA 1 cut(s) 1727
MscI TGGCCA 1 cut(s) 1727
MseI TTAA 1 cut(s) 2522
Msp20I TGGCCA 1 cut(s) 1727
MspI CCGG 3 cut(s) 361, 1246, 1272
Mva1269I GAATGC 2 cut(s) 1426, 2626
NciI CCSGG 2 cut(s) 1246, 1273
NcoI CCATGG 1 cut(s) 1960
NheI GCTAGC 1 cut(s) 310
NlaIII CATG 4 cut(s) 1076, 1108, 1325, 1964
NmuCI GTSAC 3 cut(s) 181, 985, 1673
NruI TCGCGA 2 cut(s) 51, 2514
PaeR7I CTCGAG 2 cut(s) 1704, 2493
PciSI GCTCTTC 2 cut(s) 120, 1425
PcsI WCGNNNNNNNCGW 1 cut(s) 1083
PctI GAATGC 2 cut(s) 1426, 2626
PflMI CCANNNNNTGG 1 cut(s) 1723
PkrI GCNGC 7 cut(s) 112, 1627, 1971, 2094, 2446, 2665, 2684
Ple19I CGATCG 1 cut(s) 55
PleI GAGTC 6 cut(s) 39, 960, 1538, 2339, 2368, 2393
PpsI GAGTC 6 cut(s) 39, 960, 1538, 2339, 2368, 2393
Ppu21I YACGTR 1 cut(s) 1681
PpuMI RGGWCCY 6 cut(s) 38, 1063, 1511, 1829, 2195, 2590
PshAI GACNNNNGTC 1 cut(s) 1916
Psp124BI GAGCTC 1 cut(s) 564
Psp5II RGGWCCY 6 cut(s) 38, 1063, 1511, 1829, 2195, 2590
PspEI GGTNACC 1 cut(s) 1673
PspOMI GGGCCC 1 cut(s) 2296
PspPPI RGGWCCY 6 cut(s) 38, 1063, 1511, 1829, 2195, 2590
PstI CTGCAG 1 cut(s) 1162
PstNI CAGNNNCTG 1 cut(s) 1262
PsuI RGATCY 2 cut(s) 1330, 1750
PvuI CGATCG 1 cut(s) 55
RruI TCGCGA 2 cut(s) 51, 2514
RsaI GTAC 6 cut(s) 349, 612, 873, 1683, 1801, 2178
RsaNI GTAC 6 cut(s) 348, 611, 872, 1682, 1800, 2177
SacI GAGCTC 1 cut(s) 564
SapI GCTCTTC 2 cut(s) 120, 1425
SaqAI TTAA 1 cut(s) 2522
SatI GCNGC 7 cut(s) 111, 1626, 1970, 2093, 2445, 2664, 2683
SchI GAGTC 6 cut(s) 40, 961, 1538, 2340, 2368, 2393
SduI GDGCHC 5 cut(s) 493, 564, 754, 1888, 2300
SfaNI GCATC 4 cut(s) 58, 1466, 1510, 2455
SfcI CTRYAG 3 cut(s) 72, 1158, 1494
Sfr274I CTCGAG 2 cut(s) 1704, 2493
SlaI CTCGAG 2 cut(s) 1704, 2493
SmlI CTYRAG 4 cut(s) 1139, 1704, 2469, 2493
SmoI CTYRAG 4 cut(s) 1139, 1704, 2469, 2493
Sse9I AATT 6 cut(s) 424, 439, 590, 851, 898, 2384
SspMI CTAG 8 cut(s) 297, 311, 446, 687, 1227, 1448, 1622, 1631
SstI GAGCTC 1 cut(s) 564
StyI CCWWGG 5 cut(s) 152, 980, 1226, 1803, 1960
TaaI ACNGT 5 cut(s) 181, 1058, 1721, 1846, 1877
TaiI ACGT 3 cut(s) 1683, 1920, 2437
TaqII GACCGA 1 cut(s) 249
TasI AATT 6 cut(s) 424, 439, 590, 851, 898, 2384
TatI WGTACW 1 cut(s) 347
TauI GCSGC 6 cut(s) 113, 1628, 1972, 2095, 2447, 2685
Tru1I TTAA 1 cut(s) 2522
Tru9I TTAA 1 cut(s) 2522
TscAI CASTG 8 cut(s) 22, 472, 547, 733, 808, 1056, 1351, 1724
TseFI GTSAC 3 cut(s) 181, 985, 1673
TseI GCWGC 1 cut(s) 2663
Tsp45I GTSAC 3 cut(s) 181, 985, 1673
TspDTI ATGAA 5 cut(s) 1341, 1572, 2043, 2427, 2541
TspGWI ACGGA 1 cut(s) 1372
TspRI CASTG 8 cut(s) 22, 472, 547, 733, 808, 1056, 1351, 1724
Van91I CCANNNNNTGG 1 cut(s) 1723
XbaI TCTAGA 1 cut(s) 445
XcmI CCANNNNNNNNNTGG 2 cut(s) 520, 781
XhoI CTCGAG 2 cut(s) 1704, 2493
XmaJI CCTAGG 1 cut(s) 1226
XspI CTAG 8 cut(s) 297, 311, 446, 687, 1227, 1448, 1622, 1631
ZraI GACGTC 1 cut(s) 2435
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.