Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003994.1

Orthogroup ID

OG0000214

Physical Location & Seq

Genomic Coordinates Forward (+)

150355 .. 151518

Gene Structure 1164 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003994.1_g000025.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1164 bp

atgatatctgatgacgactcctcggaggatgaaagcgtggaaagccactctgaaacttctgccgcttatgaggaactgatgacaacagagattctcggggcactagagattcaagaggtgaatgaggcgggcccttttcctcttggtgaccacgtaccagatattgacccgacagctcgagaggtaagccactgtttggccaatactttccatttccctttagatccaaccctgctctctgacatttctgaacctgaccaggattctatctgtaccgaggaggcagctgcaaatgctgctggtcttatcggcgggacagtcgccctagagatggaaaatgatactaatggtggtggtgccccccaagtctcgcgaacaaatgagacaaccgtcgaagctgagggctctgtgcttgaatctgctccacttgcccatggtgagccgcgagttgagtttccagattcccctgaggctgaagagacagaccaacctgttgaagatgaagaaactgaggaagctgtccacccttttgcattggtggttcgtgatcctgtggcgcctctgccgcctcctcctcctaccagattcgagagattgatgagggtgttggaggtaactcctccttctgttgtggatgaggctaagatggtgcttcacgaacatttgggtccttgggtattagagactgacatcctcccgcgagtcttggaagctctaaggtatctttgccaggagaaggttttgactctgtggcaatttagtgctatcgactctctgctgaatgaacttgatatggtccaccaacatcaatcggccgcgaacacccaggctcacgacgctcaagaggctttgaatagtctctctcgagaaatggacatctcccgcgatattttaaatgaacgatccatccgcctgcgggaactacaaatccaaaggtccgctttctttgacatgaatgtagaacaaactttcatggaacaaagaggagaagatcaccaggagattgaaaccctttcactgtttcctgtgcatggtgaggacatctttagtaacatgaagactacttccgatggaggtggcggtcacggtggtggctcttacatttcccttgagcttagcctttcctgtgagggcaaagctggaaaaattttctggagccgctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001763 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0009933 GO:0009987 GO:0010014 GO:0010016 GO:0010223 GO:0010346 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019827 GO:0022412 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048507 GO:0048532 GO:0048608 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0080166 GO:0090506 GO:0090567 GO:0098727 GO:0099402 GO:0140110 GO:1903506 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox

Protein Analysis

387

Amino Acids

42.56

Weight (kDa)

4.25

Isoelectric Point (pI)

49.73

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000214)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr5g0079611
rosa_multiflora	Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii	Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha	Rh3DG208400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	356, 556
AccB7I	CCANNNNNTGG	1 cut(s)	196
AccII	CGCG	5 cut(s)	373, 445, 700, 818, 885
AclWI	GGATC	3 cut(s)	218, 542, 897
AcoI	YGGCCR	2 cut(s)	198, 813
AcsI	RAATTY	1 cut(s)	1146
AcuI	CTGAAG	1 cut(s)	495
AcyI	GRCGYC	1 cut(s)	557
AfaI	GTAC	2 cut(s)	156, 274
AfiI	CCNNNNNNNGG	5 cut(s)	196, 331, 736, 916, 1031
AgsI	TTSAA	5 cut(s)	113, 416, 497, 853, 1007
AjnI	CCWGG	4 cut(s)	258, 729, 825, 996
AleI	CACNNNNGTG	1 cut(s)	1089
AloI	GAACNNNNNNTCC	4 cut(s)	891, 912, 923, 944
AluBI	AGCT	7 cut(s)	176, 287, 398, 518, 713, 1114, 1139
AluI	AGCT	7 cut(s)	176, 287, 398, 518, 713, 1114, 1139
Alw26I	GTCTC	5 cut(s)	373, 377, 473, 677, 863
AlwI	GGATC	3 cut(s)	218, 542, 897
Ama87I	CYCGRG	3 cut(s)	95, 177, 864
AoxI	GGCC	3 cut(s)	130, 198, 813
ApaI	GGGCCC	1 cut(s)	134
ApeKI	GCWGC	3 cut(s)	284, 287, 296
ApoI	RAATTY	1 cut(s)	1146
AspLEI	GCGC	1 cut(s)	559
AspS9I	GGNCC	5 cut(s)	130, 131, 668, 796, 936
AsuHPI	GGTGA	5 cut(s)	130, 158, 449, 986, 1046
AvaI	CYCGRG	3 cut(s)	95, 177, 864
AvaII	GGWCC	3 cut(s)	668, 796, 936
AxyI	CCTNAGG	1 cut(s)	468
BaeGI	GKGCMC	3 cut(s)	103, 134, 361
BalI	TGGCCA	1 cut(s)	200
BanI	GGYRCC	2 cut(s)	356, 556
BanII	GRGCYC	2 cut(s)	134, 407
BbsI	GAAGAC	1 cut(s)	1064
BbvCI	CCTCAGC	1 cut(s)	399
BbvI	GCAGC	3 cut(s)	274, 283, 296
BccI	CCATC	4 cut(s)	325, 640, 914, 1064
BciT130I	CCWGG	4 cut(s)	260, 731, 827, 998
BcoDI	GTCTC	5 cut(s)	373, 377, 473, 677, 863
BfaI	CTAG	2 cut(s)	104, 326
BfoI	RGCGCY	1 cut(s)	560
BisI	GCNGC	8 cut(s)	63, 285, 288, 297, 443, 566, 816, 1159
BlpI	GCTNAGC	1 cut(s)	1115
BlsI	GCNGC	8 cut(s)	64, 286, 289, 298, 444, 567, 817, 1160
Bme1390I	CCNGG	4 cut(s)	260, 731, 827, 998
Bme18I	GGWCC	3 cut(s)	668, 796, 936
BmeT110I	CYCGRG	3 cut(s)	95, 177, 864
BmgT120I	GGNCC	5 cut(s)	130, 131, 668, 796, 936
BmiI	GGNNCC	5 cut(s)	132, 358, 558, 669, 1157
BmrFI	CCNGG	4 cut(s)	260, 731, 827, 998
BoxI	GACNNNNGTC	1 cut(s)	389
BpiI	GAAGAC	1 cut(s)	1064
Bpu10I	CCTNAGC	1 cut(s)	399
Bpu1102I	GCTNAGC	1 cut(s)	1115
BpuEI	CTTGAG	2 cut(s)	825, 1130
BsaAI	YACGTR	1 cut(s)	154
BsaHI	GRCGYC	1 cut(s)	557
BsaJI	CCNNGG	5 cut(s)	21, 276, 433, 671, 825
Bsc4I	CCNNNNNNNGG	5 cut(s)	196, 331, 736, 916, 1031
Bse21I	CCTNAGG	1 cut(s)	468
BseBI	CCWGG	4 cut(s)	260, 731, 827, 998
BseDI	CCNNGG	5 cut(s)	21, 276, 433, 671, 825
BseGI	GGATG	4 cut(s)	34, 640, 690, 906
BseLI	CCNNNNNNNGG	5 cut(s)	196, 331, 736, 916, 1031
BseMII	CTCAG	3 cut(s)	390, 459, 501
BseRI	GAGGAG	6 cut(s)	10, 293, 561, 564, 609, 999
BseSI	GKGCMC	3 cut(s)	103, 134, 361
BseX3I	CGGCCG	1 cut(s)	813
BseXI	GCAGC	3 cut(s)	274, 283, 296
Bsh1236I	CGCG	5 cut(s)	373, 445, 700, 818, 885
Bsh1285I	CGRYCG	1 cut(s)	816
BshFI	GGCC	3 cut(s)	132, 200, 815
BshNI	GGYRCC	2 cut(s)	356, 556
BsiEI	CGRYCG	1 cut(s)	816
BsiHKCI	CYCGRG	3 cut(s)	95, 177, 864
BslFI	GGGAC	1 cut(s)	328
BslI	CCNNNNNNNGG	5 cut(s)	196, 331, 736, 916, 1031
BsmAI	GTCTC	5 cut(s)	373, 377, 473, 677, 863
BsmFI	GGGAC	1 cut(s)	328
BsnI	GGCC	3 cut(s)	132, 200, 815
BsoBI	CYCGRG	3 cut(s)	95, 177, 864
Bsp120I	GGGCCC	1 cut(s)	130
Bsp1286I	GDGCHC	4 cut(s)	103, 134, 361, 407
Bsp143I	GATC	4 cut(s)	223, 547, 902, 991
Bsp1720I	GCTNAGC	1 cut(s)	1115
Bsp19I	CCATGG	1 cut(s)	433
Bsp68I	TCGCGA	1 cut(s)	373
BspANI	GGCC	3 cut(s)	132, 200, 815
BspCNI	CTCAG	3 cut(s)	391, 460, 502
BspFNI	CGCG	5 cut(s)	373, 445, 700, 818, 885
BspLI	GGNNCC	5 cut(s)	132, 358, 558, 669, 1157
BspPI	GGATC	3 cut(s)	218, 542, 897
BspT107I	GGYRCC	2 cut(s)	356, 556
BssECI	CCNNGG	5 cut(s)	21, 276, 433, 671, 825
BssMI	GATC	4 cut(s)	223, 547, 902, 991
BssNI	GRCGYC	1 cut(s)	557
BssT1I	CCWWGG	2 cut(s)	433, 671
Bst2UI	CCWGG	4 cut(s)	260, 731, 827, 998
Bst4CI	ACNGT	5 cut(s)	194, 319, 391, 1020, 1088
Bst6I	CTCTTC	1 cut(s)	471
BstACI	GRCGYC	1 cut(s)	557
BstAPI	GCANNNNNTGC	1 cut(s)	296
BstBAI	YACGTR	1 cut(s)	154
BstC8I	GCNNGC	2 cut(s)	130, 914
BstDEI	CTNAG	6 cut(s)	399, 468, 510, 642, 716, 1115
BstDSI	CCRYGG	1 cut(s)	433
BstEII	GGTNACC	1 cut(s)	146
BstF5I	GGATG	4 cut(s)	34, 640, 690, 906
BstFNI	CGCG	5 cut(s)	373, 445, 700, 818, 885
BstH2I	RGCGCY	1 cut(s)	560
BstHHI	GCGC	1 cut(s)	559
BstKTI	GATC	4 cut(s)	226, 550, 905, 994
BstMAI	GTCTC	5 cut(s)	373, 377, 473, 677, 863
BstMBI	GATC	4 cut(s)	223, 547, 902, 991
BstMCI	CGRYCG	1 cut(s)	816
BstMWI	GCNNNNNNNGC	7 cut(s)	42, 293, 296, 428, 565, 836, 845
BstNI	CCWGG	4 cut(s)	260, 731, 827, 998
BstPAI	GACNNNNGTC	1 cut(s)	389
BstPI	GGTNACC	1 cut(s)	146
BstSCI	CCNGG	4 cut(s)	258, 729, 825, 996
BstSLI	GKGCMC	3 cut(s)	103, 134, 361
BstUI	CGCG	5 cut(s)	373, 445, 700, 818, 885
BstV1I	GCAGC	3 cut(s)	274, 283, 296
BstV2I	GAAGAC	1 cut(s)	1064
BstX2I	RGATCY	1 cut(s)	223
BstYI	RGATCY	1 cut(s)	223
BstZI	CGGCCG	1 cut(s)	813
Bsu36I	CCTNAGG	1 cut(s)	468
BsuRI	GGCC	3 cut(s)	132, 200, 815
BtgI	CCRYGG	1 cut(s)	433
BtsCI	GGATG	4 cut(s)	34, 640, 690, 906
BtsIMutI	CAGTG	2 cut(s)	190, 1016
BtuMI	TCGCGA	1 cut(s)	373
Cac8I	GCNNGC	2 cut(s)	130, 914
CfoI	GCGC	1 cut(s)	559
Cfr13I	GGNCC	5 cut(s)	130, 131, 668, 796, 936
CseI	GACGC	1 cut(s)	845
Csp6I	GTAC	2 cut(s)	155, 273
CviAII	CATG	5 cut(s)	434, 952, 973, 1031, 1054
CviQI	GTAC	2 cut(s)	155, 273
DdeI	CTNAG	6 cut(s)	399, 468, 510, 642, 716, 1115
DinI	GGCGCC	1 cut(s)	558
DpnI	GATC	4 cut(s)	225, 549, 904, 993
DpnII	GATC	4 cut(s)	223, 547, 902, 991
DraI	TTTAAA	1 cut(s)	894
EaeI	YGGCCR	2 cut(s)	198, 813
EagI	CGGCCG	1 cut(s)	813
Eam1104I	CTCTTC	1 cut(s)	471
EarI	CTCTTC	1 cut(s)	471
EciI	GGCGGA	1 cut(s)	899
EclXI	CGGCCG	1 cut(s)	813
Eco130I	CCWWGG	2 cut(s)	433, 671
Eco24I	GRGCYC	2 cut(s)	134, 407
Eco32I	GATATC	1 cut(s)	6
Eco47I	GGWCC	3 cut(s)	668, 796, 936
Eco52I	CGGCCG	1 cut(s)	813
Eco57I	CTGAAG	1 cut(s)	495
Eco81I	CCTNAGG	1 cut(s)	468
Eco88I	CYCGRG	3 cut(s)	95, 177, 864
Eco91I	GGTNACC	1 cut(s)	146
EcoO109I	RGGNCCY	2 cut(s)	131, 668
EcoO65I	GGTNACC	1 cut(s)	146
EcoRII	CCWGG	4 cut(s)	258, 729, 825, 996
EcoRV	GATATC	1 cut(s)	6
EcoT14I	CCWWGG	2 cut(s)	433, 671
EcoT38I	GRGCYC	2 cut(s)	134, 407
EgeI	GGCGCC	1 cut(s)	558
EheI	GGCGCC	1 cut(s)	558
ErhI	CCWWGG	2 cut(s)	433, 671
FaeI	CATG	5 cut(s)	437, 955, 976, 1034, 1057
FaiI	YATR	7 cut(s)	69, 435, 794, 953, 974, 1032, 1055
FalI	AAGNNNNNCTT	2 cut(s)	925, 957
FaqI	GGGAC	1 cut(s)	328
FatI	CATG	5 cut(s)	433, 951, 972, 1030, 1053
FauI	CCCGC	5 cut(s)	121, 305, 705, 890, 909
Fnu4HI	GCNGC	8 cut(s)	63, 285, 288, 297, 443, 566, 816, 1159
FokI	GGATG	4 cut(s)	41, 647, 677, 893
FriOI	GRGCYC	2 cut(s)	134, 407
Fsp4HI	GCNGC	8 cut(s)	63, 285, 288, 297, 443, 566, 816, 1159
FspBI	CTAG	2 cut(s)	104, 326
GlaI	GCGC	1 cut(s)	558
GluI	GCNGC	8 cut(s)	63, 285, 288, 297, 443, 566, 816, 1159
HaeII	RGCGCY	1 cut(s)	560
HaeIII	GGCC	3 cut(s)	132, 200, 815
HgaI	GACGC	1 cut(s)	845
HhaI	GCGC	1 cut(s)	559
Hin1I	GRCGYC	1 cut(s)	557
Hin1II	CATG	5 cut(s)	437, 955, 976, 1034, 1057
Hin6I	GCGC	1 cut(s)	557
HinP1I	GCGC	1 cut(s)	557
HphI	GGTGA	5 cut(s)	130, 158, 449, 986, 1046
Hpy166II	GTNNAC	2 cut(s)	523, 799
Hpy188I	TCNGA	6 cut(s)	10, 25, 52, 241, 250, 1069
Hpy8I	GTNNAC	2 cut(s)	523, 799
Hpy99I	CGWCG	2 cut(s)	395, 839
HpyAV	CCTTC	2 cut(s)	633, 730
HpyCH4III	ACNGT	5 cut(s)	194, 319, 391, 1020, 1088
HpyCH4IV	ACGT	1 cut(s)	153
HpyCH4V	TGCA	3 cut(s)	290, 533, 1030
HpyF10VI	GCNNNNNNNGC	7 cut(s)	42, 293, 296, 428, 565, 836, 845
HpyF3I	CTNAG	6 cut(s)	399, 468, 510, 642, 716, 1115
HpySE526I	ACGT	1 cut(s)	153
Hsp92I	GRCGYC	1 cut(s)	557
Hsp92II	CATG	5 cut(s)	437, 955, 976, 1034, 1057
HspAI	GCGC	1 cut(s)	557
KasI	GGCGCC	1 cut(s)	556
Kzo9I	GATC	4 cut(s)	223, 547, 902, 991
LmnI	GCTCC	2 cut(s)	427, 1155
Lsp1109I	GCAGC	3 cut(s)	274, 283, 296
MaeI	CTAG	2 cut(s)	104, 326
MaeII	ACGT	1 cut(s)	153
MaeIII	GTNAC	4 cut(s)	146, 613, 1049, 1082
MalI	GATC	4 cut(s)	225, 549, 904, 993
MboI	GATC	4 cut(s)	223, 547, 902, 991
MboII	GAAGA	5 cut(s)	488, 509, 515, 1001, 1069
MflI	RGATCY	1 cut(s)	223
MhlI	GDGCHC	4 cut(s)	103, 134, 361, 407
MlsI	TGGCCA	1 cut(s)	200
MluCI	AATT	2 cut(s)	755, 1146
MluNI	TGGCCA	1 cut(s)	200
Mly113I	GGCGCC	1 cut(s)	557
MlyI	GAGTC	4 cut(s)	11, 711, 739, 764
MmeI	TCCRAC	2 cut(s)	251, 588
Mox20I	TGGCCA	1 cut(s)	200
MscI	TGGCCA	1 cut(s)	200
MseI	TTAA	1 cut(s)	893
MslI	CAYNNNNRTG	1 cut(s)	1089
Msp20I	TGGCCA	1 cut(s)	200
MspA1I	CMGCKG	2 cut(s)	287, 1161
MspR9I	CCNGG	4 cut(s)	260, 731, 827, 998
MvaI	CCWGG	4 cut(s)	260, 731, 827, 998
MvnI	CGCG	5 cut(s)	373, 445, 700, 818, 885
MwoI	GCNNNNNNNGC	7 cut(s)	42, 293, 296, 428, 565, 836, 845
NarI	GGCGCC	1 cut(s)	557
NcoI	CCATGG	1 cut(s)	433
NdeII	GATC	4 cut(s)	223, 547, 902, 991
NlaIII	CATG	5 cut(s)	437, 955, 976, 1034, 1057
NlaIV	GGNNCC	5 cut(s)	132, 358, 558, 669, 1157
NmuCI	GTSAC	2 cut(s)	146, 1082
NruI	TCGCGA	1 cut(s)	373
OliI	CACNNNNGTG	1 cut(s)	1089
PaeR7I	CTCGAG	2 cut(s)	177, 864
PfeI	GAWTC	6 cut(s)	91, 109, 263, 416, 461, 585
PflMI	CCANNNNNTGG	1 cut(s)	196
PkrI	GCNGC	8 cut(s)	64, 286, 289, 298, 444, 567, 817, 1160
PleI	GAGTC	4 cut(s)	11, 710, 739, 764
PluTI	GGCGCC	1 cut(s)	560
PpsI	GAGTC	4 cut(s)	11, 710, 739, 764
Ppu21I	YACGTR	1 cut(s)	154
PpuMI	RGGWCCY	1 cut(s)	668
PshAI	GACNNNNGTC	1 cut(s)	389
Psp5II	RGGWCCY	1 cut(s)	668
Psp6I	CCWGG	4 cut(s)	258, 729, 825, 996
PspEI	GGTNACC	1 cut(s)	146
PspGI	CCWGG	4 cut(s)	258, 729, 825, 996
PspN4I	GGNNCC	5 cut(s)	132, 358, 558, 669, 1157
PspOMI	GGGCCC	1 cut(s)	130
PspPI	GGNCC	5 cut(s)	130, 131, 668, 796, 936
PspPPI	RGGWCCY	1 cut(s)	668
PsuI	RGATCY	1 cut(s)	223
PvuII	CAGCTG	1 cut(s)	287
RruI	TCGCGA	1 cut(s)	373
RsaI	GTAC	2 cut(s)	156, 274
RsaNI	GTAC	2 cut(s)	155, 273
RseI	CAYNNNNRTG	1 cut(s)	1089
SaqAI	TTAA	1 cut(s)	893
SatI	GCNGC	8 cut(s)	63, 285, 288, 297, 443, 566, 816, 1159
Sau3AI	GATC	4 cut(s)	223, 547, 902, 991
Sau96I	GGNCC	5 cut(s)	130, 131, 668, 796, 936
SchI	GAGTC	4 cut(s)	11, 711, 739, 764
ScrFI	CCNGG	4 cut(s)	260, 731, 827, 998
SduI	GDGCHC	4 cut(s)	103, 134, 361, 407
SfoI	GGCGCC	1 cut(s)	558
Sfr274I	CTCGAG	2 cut(s)	177, 864
SinI	GGWCC	3 cut(s)	668, 796, 936
SlaI	CTCGAG	2 cut(s)	177, 864
SmiMI	CAYNNNNRTG	1 cut(s)	1089
SmlI	CTYRAG	4 cut(s)	177, 840, 864, 1109
SmoI	CTYRAG	4 cut(s)	177, 840, 864, 1109
Sse9I	AATT	2 cut(s)	755, 1146
SspDI	GGCGCC	1 cut(s)	556
SspMI	CTAG	2 cut(s)	104, 326
StyD4I	CCNGG	4 cut(s)	258, 729, 825, 996
StyI	CCWWGG	2 cut(s)	433, 671
TaaI	ACNGT	5 cut(s)	194, 319, 391, 1020, 1088
TaiI	ACGT	1 cut(s)	156
TaqI	TCGA	5 cut(s)	178, 393, 588, 768, 865
TasI	AATT	2 cut(s)	755, 1146
TauI	GCSGC	5 cut(s)	65, 445, 568, 818, 1161
TfiI	GAWTC	6 cut(s)	91, 109, 263, 416, 461, 585
Tru1I	TTAA	1 cut(s)	893
Tru9I	TTAA	1 cut(s)	893
TscAI	CASTG	2 cut(s)	197, 1023
TseFI	GTSAC	2 cut(s)	146, 1082
TseI	GCWGC	3 cut(s)	284, 287, 296
Tsp45I	GTSAC	2 cut(s)	146, 1082
TspDTI	ATGAA	7 cut(s)	45, 516, 798, 912, 961, 968, 1070
TspRI	CASTG	2 cut(s)	197, 1023
Van91I	CCANNNNNTGG	1 cut(s)	196
VpaK11BI	GGWCC	3 cut(s)	668, 796, 936
XapI	RAATTY	1 cut(s)	1146
XhoI	CTCGAG	2 cut(s)	177, 864
XspI	CTAG	2 cut(s)	104, 326

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.