Rmu_sc0000744.1_g000144

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000744.1
OG0000214
Physical Location & Seq
Reverse (-)
531377 .. 533935
2559 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000744.1_g000144.1.cds

Sequence Viewer

Length: 1908 bp
atgccggacccaaaaatagccctttctaggcgattccctcctccccttgatgatggctttctgcccaatggacgggatcatagtgaaagagccctcctggcctttcgtcgcgccatctcctgcttggatattcgtcttaccactgattgcgtaagttacgagctctacgcccctaaccactttgctcgccaatttgggttggcccagttggtaccctggcctctggttgattctgccaattactacacctcttggcggagattagccccgcctggagcgctataccccctcaacgatgtcgatgacgactatgctgattggtggaaagaagtgtcagtgaactgttgggacctgccacatgacgaactcttcgtcctgatctttcgtggcatgagtagccctggtccggaggaccgcgagattcttgagcgcttctccaaacctgcagaacaacccccgcgacctattctaccttctcgctcattgcgttcagggatacaaatccacgagcctagggcaacagccactgctgtctttgcttgcaaacgcgatagagctcaattcgtcgaagagagttttgaagatgatgaacttctgggaatgcgactgcatcaactaaccctgtggcacctttcaagcgaagctggaccctcagccactgcaaaagagccaattctctcgctagttcaagcattaactaaccctgtggcacctttcccatctcccagatctacagagcatctgcaaggtcctaccatcctaataacgatttctgatgacgactcctcggagcatgaaagtgtggaaagccactctgaggcttctgctgcttatgaggaactgatgacgacagagattctcgcggcactagaggttcaagaggtgaatgaggcggggcctcttcctcttggtgaccacgtattagatattgacccgacagctcgagaggtaagccactgtttggccaatactttccatttccctttagatccaaccttgctctctgattcggtactagaggttcaagaggtgaatgaggcggggcctcttcctcttggtgatcacgtaccagatattgacccgacagctcaagaggattctgtttgtaccgaggaggcggctacaaacaatgagggtcctatcggcgggacagtcgccccagagatggaaaatgatactaacggtggtggtgccccccaagtctcgcgaacaaatgagacaactgtcgaagctgagggctctgtgcttgaatctgctccacttacccatggtgagccgcgagttgagtttccagattcccttgaggctgaagggacagaccaacctgttgaagatgaagaaactgaggaagctgtccatccttttgcattggtggttcgtgatcctgtggcgcctctgccgcctcctcctcctaccagattcgagagattgatgagggtcttggaggtaaatcctccttctgctgtggatgaggctaaaatggtgcttcgcgaacatctgggtcctcaggttttggagactgacattctcccggctcgccgccatcaatcagccgcgaacgcccaggctcacaacgctcgagaggctttgaataacctttcccaagaaatggacatcccccgcgggattttaaatgaacgagccatccgcctgcgggaactacaaatccaaaggtccgacttcaaacttcggatcgaggatctccaagcccgtttagcctttgttgagaatgcgattattgcagaagaagctcaactcgatgaacctttagctgcttctgaagaaatgggccgcaacctggcccgtatcagagatcgggccactcaagccgaagctggtgctattgaggcgaaacgccacgtggaggaactttgtttgaaattgagctttgtaggccaatctttgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

635

Amino Acids

70.22

Weight (kDa)

4.57

Isoelectric Point (pI)

57.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000214)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0079611
rosa_multiflora Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha Rh3DG208400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 360, 451
Acc65I GGTACC 1 cut(s) 211
AccB1I GGYRCC 5 cut(s) 211, 627, 709, 1190, 1390
AccB7I CCANNNNNTGG 2 cut(s) 961, 1609
AccIII TCCGGA 1 cut(s) 406
AclWI GGATC 5 cut(s) 84, 983, 1376, 1700, 1707
AcoI YGGCCR 1 cut(s) 963
AcuI CTGAAG 2 cut(s) 1329, 1800
AcvI CACGTG 1 cut(s) 1861
AcyI GRCGYC 1 cut(s) 1391
AfaI GTAC 4 cut(s) 213, 1014, 1068, 1108
AfeI AGCGCT 2 cut(s) 279, 431
AjnI CCWGG 6 cut(s) 96, 215, 271, 400, 1563, 1797
AloI GAACNNNNNNTCC 6 cut(s) 357, 389, 1629, 1650, 1661, 1682
Alw21I GWGCWC 2 cut(s) 165, 559
Alw26I GTCTC 3 cut(s) 1207, 1211, 1511
AlwI GGATC 5 cut(s) 84, 983, 1376, 1700, 1707
AlwNI CAGNNNCTG 2 cut(s) 527, 659
Ama87I CYCGRG 2 cut(s) 942, 1578
Aor13HI TCCGGA 1 cut(s) 406
Aor51HI AGCGCT 2 cut(s) 279, 431
ApeKI GCWGC 2 cut(s) 827, 1772
ArsI GACNNNNNNTTYG 4 cut(s) 353, 357, 385, 389
Asp718I GGTACC 1 cut(s) 211
AspA2I CCTAGG 1 cut(s) 512
AspLEI GCGC 4 cut(s) 113, 280, 432, 1393
AsuC2I CCSGG 1 cut(s) 1532
AsuHPI GGTGA 5 cut(s) 895, 923, 1042, 1070, 1283
AvaI CYCGRG 2 cut(s) 942, 1578
AvaII GGWCC 9 cut(s) 7, 349, 404, 412, 647, 749, 1136, 1502, 1674
AvrII CCTAGG 1 cut(s) 512
AxyI CCTNAGG 1 cut(s) 1506
BaeGI GKGCMC 1 cut(s) 1195
BalI TGGCCA 1 cut(s) 965
BanI GGYRCC 5 cut(s) 211, 627, 709, 1190, 1390
BanII GRGCYC 4 cut(s) 94, 165, 559, 1241
BauI CACGAG 1 cut(s) 506
BbrPI CACGTG 1 cut(s) 1861
Bbv12I GWGCWC 2 cut(s) 165, 559
BbvCI CCTCAGC 2 cut(s) 652, 1233
BbvI GCAGC 2 cut(s) 814, 1759
BccI CCATC 8 cut(s) 47, 122, 727, 764, 1159, 1365, 1551, 1652
BcgI CGANNNNNNTGC 2 cut(s) 1820, 1854
BciT130I CCWGG 6 cut(s) 98, 217, 273, 402, 1565, 1799
BciVI GTATCC 1 cut(s) 489
BclI TGATCA 1 cut(s) 1060
BcnI CCSGG 1 cut(s) 1532
BcoDI GTCTC 3 cut(s) 1207, 1211, 1511
BfaI CTAG 5 cut(s) 27, 513, 683, 869, 1016
BfmI CTRYAG 2 cut(s) 444, 732
BfoI RGCGCY 3 cut(s) 281, 433, 1394
BfuAI ACCTGC 2 cut(s) 360, 451
BfuI GTATCC 1 cut(s) 489
BglI GCCNNNNNGGC 1 cut(s) 98
BglII AGATCT 1 cut(s) 728
BisI GCNGC 9 cut(s) 828, 864, 1119, 1277, 1400, 1540, 1554, 1773, 1792
BlnI CCTAGG 1 cut(s) 512
BlsI GCNGC 9 cut(s) 829, 865, 1120, 1278, 1401, 1541, 1555, 1774, 1793
Bme1390I CCNGG 7 cut(s) 98, 217, 273, 402, 1532, 1565, 1799
Bme18I GGWCC 9 cut(s) 7, 349, 404, 412, 647, 749, 1136, 1502, 1674
BmeT110I CYCGRG 2 cut(s) 942, 1578
BmrFI CCNGG 7 cut(s) 98, 217, 273, 402, 1532, 1565, 1799
BmrI ACTGGG 1 cut(s) 199
BmsI GCATC 2 cut(s) 619, 748
BmuI ACTGGG 1 cut(s) 199
BoxI GACNNNNGTC 1 cut(s) 1223
BplI GAGNNNNNCTC 2 cut(s) 419, 451
BpmI CTGGAG 1 cut(s) 294
Bpu10I CCTNAGC 2 cut(s) 652, 1233
BpuEI CTTGAG 4 cut(s) 446, 1074, 1322, 1809
BpuMI CCSGG 1 cut(s) 1532
BsaAI YACGTR 3 cut(s) 919, 1066, 1861
BsaBI GATNNNNATC 1 cut(s) 500
BsaHI GRCGYC 1 cut(s) 1391
BsaJI CCNNGG 8 cut(s) 215, 400, 512, 786, 1110, 1267, 1563, 1621
BsaWI WCCGGW 1 cut(s) 406
Bse1I ACTGG 1 cut(s) 205
Bse21I CCTNAGG 1 cut(s) 1506
Bse3DI GCAATG 1 cut(s) 482
Bse8I GATNNNNATC 1 cut(s) 500
BseAI TCCGGA 1 cut(s) 406
BseBI CCWGG 6 cut(s) 98, 217, 273, 402, 1565, 1799
BseDI CCNNGG 8 cut(s) 215, 400, 512, 786, 1110, 1267, 1563, 1621
BseGI GGATG 5 cut(s) 756, 1357, 1474, 1614, 1644
BseJI GATNNNNATC 1 cut(s) 500
BseMI GCAATG 1 cut(s) 482
BseMII CTCAG 5 cut(s) 666, 807, 1224, 1335, 1520
BseNI ACTGG 1 cut(s) 205
BseRI GAGGAG 5 cut(s) 30, 775, 1127, 1395, 1398
BseSI GKGCMC 1 cut(s) 1195
BseXI GCAGC 2 cut(s) 814, 1759
BshNI GGYRCC 5 cut(s) 211, 627, 709, 1190, 1390
BsiHKAI GWGCWC 2 cut(s) 165, 559
BsiHKCI CYCGRG 2 cut(s) 942, 1578
BsiSI CCGG 3 cut(s) 5, 407, 1532
BslFI GGGAC 3 cut(s) 362, 1162, 1327
BsmAI GTCTC 3 cut(s) 1207, 1211, 1511
BsmFI GGGAC 3 cut(s) 362, 1162, 1327
BsmI GAATGC 2 cut(s) 606, 1735
BsoBI CYCGRG 2 cut(s) 942, 1578
Bsp1286I GDGCHC 5 cut(s) 94, 165, 559, 1195, 1241
Bsp13I TCCGGA 1 cut(s) 406
Bsp143I GATC 9 cut(s) 76, 378, 728, 988, 1060, 1381, 1692, 1699, 1813
Bsp19I CCATGG 1 cut(s) 1267
Bsp68I TCGCGA 2 cut(s) 1207, 1491
BspCNI CTCAG 5 cut(s) 665, 808, 1225, 1336, 1519
BspEI TCCGGA 1 cut(s) 406
BspMAI CTGCAG 1 cut(s) 448
BspMI ACCTGC 2 cut(s) 360, 451
BspPI GGATC 5 cut(s) 84, 983, 1376, 1700, 1707
BspT107I GGYRCC 5 cut(s) 211, 627, 709, 1190, 1390
BsrDI GCAATG 1 cut(s) 482
BsrI ACTGG 1 cut(s) 205
BssECI CCNNGG 8 cut(s) 215, 400, 512, 786, 1110, 1267, 1563, 1621
BssMI GATC 9 cut(s) 76, 378, 728, 988, 1060, 1381, 1692, 1699, 1813
BssNI GRCGYC 1 cut(s) 1391
BssSI CACGAG 1 cut(s) 506
BssT1I CCWWGG 2 cut(s) 512, 1267
Bst2BI CACGAG 1 cut(s) 506
Bst2UI CCWGG 6 cut(s) 98, 217, 273, 402, 1565, 1799
Bst4CI ACNGT 5 cut(s) 344, 959, 1153, 1184, 1225
Bst6I CTCTTC 4 cut(s) 374, 564, 906, 1053
BstACI GRCGYC 1 cut(s) 1391
BstBAI YACGTR 3 cut(s) 919, 1066, 1861
BstC8I GCNNGC 4 cut(s) 187, 541, 1537, 1652
BstDEI CTNAG 5 cut(s) 652, 816, 1233, 1344, 1506
BstDSI CCRYGG 2 cut(s) 1267, 1621
BstEII GGTNACC 1 cut(s) 911
BstF5I GGATG 5 cut(s) 756, 1357, 1474, 1614, 1644
BstH2I RGCGCY 3 cut(s) 281, 433, 1394
BstHHI GCGC 4 cut(s) 113, 280, 432, 1393
BstKTI GATC 9 cut(s) 79, 381, 731, 991, 1063, 1384, 1695, 1702, 1816
BstMAI GTCTC 3 cut(s) 1207, 1211, 1511
BstMBI GATC 9 cut(s) 76, 378, 728, 988, 1060, 1381, 1692, 1699, 1813
BstNI CCWGG 6 cut(s) 98, 217, 273, 402, 1565, 1799
BstPAI GACNNNNGTC 1 cut(s) 1223
BstPI GGTNACC 1 cut(s) 911
BstSCI CCNGG 7 cut(s) 96, 215, 271, 400, 1530, 1563, 1797
BstSFI CTRYAG 2 cut(s) 444, 732
BstSLI GKGCMC 1 cut(s) 1195
BstV1I GCAGC 2 cut(s) 814, 1759
BstX2I RGATCY 3 cut(s) 728, 988, 1699
BstYI RGATCY 3 cut(s) 728, 988, 1699
Bsu36I CCTNAGG 1 cut(s) 1506
BsuI GTATCC 1 cut(s) 489
BtgI CCRYGG 2 cut(s) 1267, 1621
BtsCI GGATG 5 cut(s) 756, 1357, 1474, 1614, 1644
BtsI GCAGTG 2 cut(s) 525, 657
BtsIMutI CAGTG 5 cut(s) 141, 342, 525, 657, 955
BtuMI TCGCGA 2 cut(s) 1207, 1491
BveI ACCTGC 2 cut(s) 360, 451
Cac8I GCNNGC 4 cut(s) 187, 541, 1537, 1652
CaiI CAGNNNCTG 2 cut(s) 527, 659
CfoI GCGC 4 cut(s) 113, 280, 432, 1393
Cfr42I CCGCGG 1 cut(s) 1624
Csp6I GTAC 4 cut(s) 212, 1013, 1067, 1107
CviAII CATG 4 cut(s) 359, 391, 794, 1268
CviQI GTAC 4 cut(s) 212, 1013, 1067, 1107
DdeI CTNAG 5 cut(s) 652, 816, 1233, 1344, 1506
DinI GGCGCC 1 cut(s) 1392
DpnI GATC 9 cut(s) 78, 380, 730, 990, 1062, 1383, 1694, 1701, 1815
DpnII GATC 9 cut(s) 76, 378, 728, 988, 1060, 1381, 1692, 1699, 1813
DraI TTTAAA 1 cut(s) 1632
EaeI YGGCCR 1 cut(s) 963
Eam1104I CTCTTC 4 cut(s) 374, 564, 906, 1053
EarI CTCTTC 4 cut(s) 374, 564, 906, 1053
EciI GGCGGA 2 cut(s) 271, 1637
Ecl136II GAGCTC 2 cut(s) 163, 557
Eco130I CCWWGG 2 cut(s) 512, 1267
Eco24I GRGCYC 4 cut(s) 94, 165, 559, 1241
Eco47I GGWCC 9 cut(s) 7, 349, 404, 412, 647, 749, 1136, 1502, 1674
Eco47III AGCGCT 2 cut(s) 279, 431
Eco53kI GAGCTC 2 cut(s) 163, 557
Eco57I CTGAAG 2 cut(s) 1329, 1800
Eco72I CACGTG 1 cut(s) 1861
Eco81I CCTNAGG 1 cut(s) 1506
Eco88I CYCGRG 2 cut(s) 942, 1578
Eco91I GGTNACC 1 cut(s) 911
EcoICRI GAGCTC 2 cut(s) 163, 557
EcoO109I RGGNCCY 6 cut(s) 349, 749, 896, 1043, 1136, 1502
EcoO65I GGTNACC 1 cut(s) 911
EcoRII CCWGG 6 cut(s) 96, 215, 271, 400, 1563, 1797
EcoT14I CCWWGG 2 cut(s) 512, 1267
EcoT38I GRGCYC 4 cut(s) 94, 165, 559, 1241
EgeI GGCGCC 1 cut(s) 1392
EheI GGCGCC 1 cut(s) 1392
ErhI CCWWGG 2 cut(s) 512, 1267
FaeI CATG 4 cut(s) 362, 394, 797, 1271
FaiI YATR 8 cut(s) 81, 283, 312, 360, 392, 795, 834, 1269
FaqI GGGAC 3 cut(s) 362, 1162, 1327
FatI CATG 4 cut(s) 358, 390, 793, 1267
FauI CCCGC 8 cut(s) 276, 465, 886, 1033, 1139, 1616, 1628, 1647
FbaI TGATCA 1 cut(s) 1060
Fnu4HI GCNGC 9 cut(s) 828, 864, 1119, 1277, 1400, 1540, 1554, 1773, 1792
FokI GGATG 5 cut(s) 743, 1344, 1481, 1601, 1631
FriOI GRGCYC 4 cut(s) 94, 165, 559, 1241
Fsp4HI GCNGC 9 cut(s) 828, 864, 1119, 1277, 1400, 1540, 1554, 1773, 1792
FspBI CTAG 5 cut(s) 27, 513, 683, 869, 1016
GlaI GCGC 4 cut(s) 112, 279, 431, 1392
GluI GCNGC 9 cut(s) 828, 864, 1119, 1277, 1400, 1540, 1554, 1773, 1792
GsuI CTGGAG 1 cut(s) 294
HaeII RGCGCY 3 cut(s) 281, 433, 1394
HapII CCGG 3 cut(s) 5, 407, 1532
HhaI GCGC 4 cut(s) 113, 280, 432, 1393
Hin1I GRCGYC 1 cut(s) 1391
Hin1II CATG 4 cut(s) 362, 394, 797, 1271
Hin6I GCGC 4 cut(s) 111, 278, 430, 1391
HinP1I GCGC 4 cut(s) 111, 278, 430, 1391
HpaII CCGG 3 cut(s) 5, 407, 1532
HphI GGTGA 5 cut(s) 895, 923, 1042, 1070, 1283
Hpy166II GTNNAC 1 cut(s) 340
Hpy188I TCNGA 8 cut(s) 775, 790, 817, 1006, 1678, 1692, 1780, 1811
Hpy8I GTNNAC 1 cut(s) 340
Hpy99I CGWCG 2 cut(s) 111, 569
HpyAV CCTTC 3 cut(s) 483, 1304, 1467
HpyCH4III ACNGT 5 cut(s) 344, 959, 1153, 1184, 1225
HpyCH4IV ACGT 3 cut(s) 918, 1065, 1860
HpyCH4V TGCA 7 cut(s) 446, 543, 610, 662, 745, 1367, 1742
HpyF3I CTNAG 5 cut(s) 652, 816, 1233, 1344, 1506
HpySE526I ACGT 3 cut(s) 918, 1065, 1860
Hsp92I GRCGYC 1 cut(s) 1391
Hsp92II CATG 4 cut(s) 362, 394, 797, 1271
HspAI GCGC 4 cut(s) 111, 278, 430, 1391
KasI GGCGCC 1 cut(s) 1390
Kpn2I TCCGGA 1 cut(s) 406
KpnI GGTACC 1 cut(s) 215
Ksp22I TGATCA 1 cut(s) 1060
KspI CCGCGG 1 cut(s) 1624
Kzo9I GATC 9 cut(s) 76, 378, 728, 988, 1060, 1381, 1692, 1699, 1813
LmnI GCTCC 3 cut(s) 275, 790, 1261
Lsp1109I GCAGC 2 cut(s) 814, 1759
LweI GCATC 2 cut(s) 619, 748
MaeI CTAG 5 cut(s) 27, 513, 683, 869, 1016
MaeII ACGT 3 cut(s) 918, 1065, 1860
MaeIII GTNAC 2 cut(s) 155, 911
MalI GATC 9 cut(s) 78, 380, 730, 990, 1062, 1383, 1694, 1701, 1815
MboI GATC 9 cut(s) 76, 378, 728, 988, 1060, 1381, 1692, 1699, 1813
MboII GAAGA 9 cut(s) 361, 581, 593, 893, 1040, 1343, 1349, 1757, 1793
MflI RGATCY 3 cut(s) 728, 988, 1699
MhlI GDGCHC 5 cut(s) 94, 165, 559, 1195, 1241
MlsI TGGCCA 1 cut(s) 965
MluCI AATT 5 cut(s) 191, 238, 560, 672, 1880
MluNI TGGCCA 1 cut(s) 965
Mly113I GGCGCC 1 cut(s) 1391
MlyI GAGTC 1 cut(s) 776
MmeI TCCRAC 2 cut(s) 1016, 1701
Mox20I TGGCCA 1 cut(s) 965
MroI TCCGGA 1 cut(s) 406
MscI TGGCCA 1 cut(s) 965
MseI TTAA 2 cut(s) 695, 1631
MslI CAYNNNNRTG 1 cut(s) 798
Msp20I TGGCCA 1 cut(s) 965
MspA1I CMGCKG 1 cut(s) 1623
MspI CCGG 3 cut(s) 5, 407, 1532
MspR9I CCNGG 7 cut(s) 98, 217, 273, 402, 1532, 1565, 1799
Mva1269I GAATGC 2 cut(s) 606, 1735
MvaI CCWGG 6 cut(s) 98, 217, 273, 402, 1565, 1799
NarI GGCGCC 1 cut(s) 1391
NciI CCSGG 1 cut(s) 1532
NcoI CCATGG 1 cut(s) 1267
NdeII GATC 9 cut(s) 76, 378, 728, 988, 1060, 1381, 1692, 1699, 1813
NlaIII CATG 4 cut(s) 362, 394, 797, 1271
NmuCI GTSAC 1 cut(s) 911
NruI TCGCGA 2 cut(s) 1207, 1491
PaeR7I CTCGAG 2 cut(s) 942, 1578
PcsI WCGNNNNNNNCGW 2 cut(s) 369, 484
PctI GAATGC 2 cut(s) 606, 1735
PfeI GAWTC 9 cut(s) 33, 230, 421, 856, 1007, 1097, 1250, 1295, 1419
PflMI CCANNNNNTGG 2 cut(s) 961, 1609
PkrI GCNGC 9 cut(s) 829, 865, 1120, 1278, 1401, 1541, 1555, 1774, 1793
PleI GAGTC 1 cut(s) 776
PluTI GGCGCC 1 cut(s) 1394
PmaCI CACGTG 1 cut(s) 1861
PmlI CACGTG 1 cut(s) 1861
PpsI GAGTC 1 cut(s) 776
Ppu21I YACGTR 3 cut(s) 919, 1066, 1861
PpuMI RGGWCCY 4 cut(s) 349, 749, 1136, 1502
PshAI GACNNNNGTC 1 cut(s) 1223
Psp124BI GAGCTC 2 cut(s) 165, 559
Psp5II RGGWCCY 4 cut(s) 349, 749, 1136, 1502
Psp6I CCWGG 6 cut(s) 96, 215, 271, 400, 1563, 1797
PspCI CACGTG 1 cut(s) 1861
PspEI GGTNACC 1 cut(s) 911
PspGI CCWGG 6 cut(s) 96, 215, 271, 400, 1563, 1797
PspPPI RGGWCCY 4 cut(s) 349, 749, 1136, 1502
PsrI GAACNNNNNNTAC 2 cut(s) 1005, 1037
PstI CTGCAG 1 cut(s) 448
PstNI CAGNNNCTG 2 cut(s) 527, 659
PsuI RGATCY 3 cut(s) 728, 988, 1699
RruI TCGCGA 2 cut(s) 1207, 1491
RsaI GTAC 4 cut(s) 213, 1014, 1068, 1108
RsaNI GTAC 4 cut(s) 212, 1013, 1067, 1107
RseI CAYNNNNRTG 1 cut(s) 798
SacI GAGCTC 2 cut(s) 165, 559
SacII CCGCGG 1 cut(s) 1624
SaqAI TTAA 2 cut(s) 695, 1631
SatI GCNGC 9 cut(s) 828, 864, 1119, 1277, 1400, 1540, 1554, 1773, 1792
Sau3AI GATC 9 cut(s) 76, 378, 728, 988, 1060, 1381, 1692, 1699, 1813
SchI GAGTC 1 cut(s) 776
ScrFI CCNGG 7 cut(s) 98, 217, 273, 402, 1532, 1565, 1799
SduI GDGCHC 5 cut(s) 94, 165, 559, 1195, 1241
SfaNI GCATC 2 cut(s) 619, 748
SfcI CTRYAG 2 cut(s) 444, 732
SfoI GGCGCC 1 cut(s) 1392
Sfr274I CTCGAG 2 cut(s) 942, 1578
Sfr303I CCGCGG 1 cut(s) 1624
SgrBI CCGCGG 1 cut(s) 1624
SinI GGWCC 9 cut(s) 7, 349, 404, 412, 647, 749, 1136, 1502, 1674
SlaI CTCGAG 2 cut(s) 942, 1578
SmiMI CAYNNNNRTG 1 cut(s) 798
SmlI CTYRAG 6 cut(s) 425, 942, 1089, 1301, 1578, 1824
SmoI CTYRAG 6 cut(s) 425, 942, 1089, 1301, 1578, 1824
Sse9I AATT 5 cut(s) 191, 238, 560, 672, 1880
SspDI GGCGCC 1 cut(s) 1390
SspMI CTAG 5 cut(s) 27, 513, 683, 869, 1016
SstI GAGCTC 2 cut(s) 165, 559
StyD4I CCNGG 7 cut(s) 96, 215, 271, 400, 1530, 1563, 1797
StyI CCWWGG 2 cut(s) 512, 1267
TaaI ACNGT 5 cut(s) 344, 959, 1153, 1184, 1225
TaiI ACGT 3 cut(s) 921, 1068, 1863
TaqI TCGA 8 cut(s) 300, 567, 943, 1227, 1422, 1579, 1695, 1758
TasI AATT 5 cut(s) 191, 238, 560, 672, 1880
TauI GCSGC 7 cut(s) 866, 1121, 1279, 1402, 1542, 1556, 1794
TfiI GAWTC 9 cut(s) 33, 230, 421, 856, 1007, 1097, 1250, 1295, 1419
Tru1I TTAA 2 cut(s) 695, 1631
Tru9I TTAA 2 cut(s) 695, 1631
TscAI CASTG 5 cut(s) 148, 342, 532, 664, 962
TseFI GTSAC 1 cut(s) 911
TseI GCWGC 2 cut(s) 827, 1772
Tsp45I GTSAC 1 cut(s) 911
TspDTI ATGAA 5 cut(s) 603, 810, 1350, 1650, 1776
TspRI CASTG 5 cut(s) 148, 342, 532, 664, 962
Van91I CCANNNNNTGG 2 cut(s) 961, 1609
VpaK11BI GGWCC 9 cut(s) 7, 349, 404, 412, 647, 749, 1136, 1502, 1674
XcmI CCANNNNNNNNNTGG 1 cut(s) 121
XhoI CTCGAG 2 cut(s) 942, 1578
XmaJI CCTAGG 1 cut(s) 512
XspI CTAG 5 cut(s) 27, 513, 683, 869, 1016
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.