Rmu_ssc0000213.1_g000089

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000213.1
OG0000214
Physical Location & Seq
Forward (+)
343602 .. 347968
4367 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000213.1_g000089.1.cds

Sequence Viewer

Length: 2652 bp
atgtcttgtcaggccaaaatgctcattttgggtccaaacattgccccccagacctcgaagtcaaaggtcttcgtcttggctgaagaggaggtccgagcgagagatttggcccgatgggacgcggtgggtatcactcaaaccatcgatctatgcttctgtcttccccataatactagcgctgcaccgctagctgccgctctttgcttctggaacacctccagcaatacattcgatttccggtttgggcagatgagcataactctgctggatgttcttaccatcacggggttgcccattgattttgacccctatgtgcatggtcagtttgatggcattcaattttctttgagaatggatatggctggtcgagggcatcacagcaaatcctacccattttggcgcgactattactgcacccagcgtgaccatacaggaagtatcgcattcctggaattctggctttgtaaatttatcttttgcacttcttccaacaaacctactgggccctggaattctctggccactgctctctacattggtatttgtgttggccttgggcaacctgtattgggtgcgttatatcgttccctttatagagcagtaatgcgcctatttgataccgacattagtggccccttctggatccttgccttttggctgcagatttatttcactctcttccgtagcagcgatattccaaaggaacctccagttgattcccttttggggaactggctttgccgcaacgtaaggtatcgagctccaccctactccgagtgttttatttacttgtacttgctgggagagatgccagacccaaaaatagtcctttctaggcgattccctcctccccttgatgatggctttctgcccagtggacaggatcatagtgaaagagccctcctggcctttcgtcgcaccatctcctgcttggatattcgtcttgccaccgactacataagttatgagctctatgcccctaaccacttcgctcgccaatttgggttggcccagttggtaccctggcctctggttgattctgctaattattacacctcttggtgcagattagccctacctgggtctgccccctttcagagtcagtttactttgatagtaattcccccttgggtcagagcgctgtaccccctcaacgatgtcgatgatgattatgctgattggtggaaagaagtgtctgtgaactgttgggacctgccacatgacgaactcttcgtcctgatctttcgtggcatgagtagtcctggtccggaggacggcgagattcttgagcgcttctctaaccctgcagcacaacccccgcgacctattctaccttctcgctcattgcgttcagggatacaaatccacgagcctagggcaacagccgggaaacaaaaggtaatagcagaggagacttctgagggagagtcttcgcaggatgaagatcccgctaagctcaattcgtcgaagagagttttgaagatgatgaacctctgggaatgcgactggaccactgatccctctcgcctgagcgaggctggaccctcagccactgtagaagagccaattctctcgctagttcaagcttcaactaaccctatggcacctctcccatctcccactacagagcatttgcaaggtcctaccattttaatatcgatctctgatgactactcctcggaggatgaaagcgtggaaagtcactctgagacttctgccgcttatgaggaactgatgacgatagagattctcacggcactagaggttcaagaggtgaatgaggcggcgcctcttcctcttggtgaccacgtaccagatattgacccgacagctcgagaggattctgtttgtaccgaggaggtggctgcaaacgctgctggtcttaacggcgggacagtcgccccagagatggaaaatgatactaacagtggtggtgccccccaagtctcgcgaacaaatgagacaaccgtcgaagctaagggctctgtgcttgaatctgctccacttgcccatggtgagccgcgagttgagtttccagattcccctgaggctgaagggacagaccaacctgttgaagatgaagaaattgaggaagctgtctacccttttgcattggtgcttcgtgatcctgtggcgcctctgccgcctcctcctcctactagattcgagagattgatgaggatgttggaggtaactcctccttctactgtggatgaggctaagatggtgcttcacgaacatctgggtcctcgggtattggagactgacatcctcccgcgagtcttggaagctctacggtatcttcgccaggagaagattttgactccgtggcaatttagtgctatcgaatctctgctgaatgaacttgatatggcccgccgaagtcaatcagccgcgaacacccagcctcacgacgctcaagaggctttgaatagtgtctctcgagaaattgacatttccccctttgttgagaatgcgattgttgcagaagaagcgcaactcgatgaacctttggctgcttctaaagaaatgggccgcaacctggcccgtatcagagattgggccactcaggccgaagctggtgccattgcggtgaaacgccacatggaggaactttgtttgaaattgagctttgcaggtcaatctttgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

883

Amino Acids

98.39

Weight (kDa)

4.66

Isoelectric Point (pI)

55.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000214)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0079611
rosa_multiflora Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha Rh3DG208400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 58
Acc36I ACCTGC 2 cut(s) 1221, 2627
Acc65I GGTACC 1 cut(s) 1018
AccB1I GGYRCC 6 cut(s) 1018, 1603, 1786, 1934, 2134, 2582
AccBSI CCGCTC 1 cut(s) 197
AccI GTMKAC 1 cut(s) 2100
AccII CGCG 7 cut(s) 122, 402, 1321, 1951, 2023, 2278, 2396
AccIII TCCGGA 1 cut(s) 1267
AclWI GGATC 6 cut(s) 637, 650, 891, 1439, 1511, 2120
AcoI YGGCCR 1 cut(s) 519
AcsI RAATTY 3 cut(s) 452, 467, 511
AcuI CTGAAG 2 cut(s) 102, 2073
AcyI GRCGYC 2 cut(s) 1787, 2135
AfaI GTAC 5 cut(s) 794, 1020, 1145, 1812, 1852
AfeI AGCGCT 3 cut(s) 178, 1140, 1292
AfiI CCNNNNNNNGG 9 cut(s) 285, 569, 726, 1080, 1274, 1534, 1909, 2542, 2608
AgsI TTSAA 9 cut(s) 338, 1480, 1583, 1590, 1769, 1994, 2075, 2431, 2623
AjnI CCWGG 8 cut(s) 447, 506, 903, 1022, 1078, 1261, 2307, 2541
AloI GAACNNNNNNTCC 2 cut(s) 1218, 1250
Alw21I GWGCWC 2 cut(s) 763, 972
Alw26I GTCTC 6 cut(s) 1406, 1703, 1951, 1955, 2255, 2443
AlwI GGATC 6 cut(s) 637, 650, 891, 1439, 1511, 2120
AlwNI CAGNNNCTG 1 cut(s) 1553
Ama87I CYCGRG 3 cut(s) 1833, 2250, 2442
Aor13HI TCCGGA 1 cut(s) 1267
Aor51HI AGCGCT 3 cut(s) 178, 1140, 1292
ApaI GGGCCC 1 cut(s) 507
ApeKI GCWGC 8 cut(s) 179, 191, 658, 687, 1307, 1865, 1874, 2516
ApoI RAATTY 3 cut(s) 452, 467, 511
ArsI GACNNNNNNTTYG 4 cut(s) 1214, 1218, 1246, 1250
Asp718I GGTACC 1 cut(s) 1018
AspA2I CCTAGG 1 cut(s) 1373
AspLEI GCGC 8 cut(s) 179, 402, 609, 1141, 1293, 1789, 2137, 2497
AsuC2I CCSGG 1 cut(s) 1387
AsuHPI GGTGA 4 cut(s) 1786, 1814, 2027, 2605
AsuNHI GCTAGC 1 cut(s) 187
AvaI CYCGRG 3 cut(s) 1833, 2250, 2442
AvaII GGWCC 8 cut(s) 32, 91, 1210, 1265, 1509, 1541, 1640, 2246
AvrII CCTAGG 1 cut(s) 1373
AxyI CCTNAGG 1 cut(s) 2046
BaeGI GKGCMC 2 cut(s) 507, 1939
BalI TGGCCA 1 cut(s) 521
BamHI GGATCC 1 cut(s) 642
BanI GGYRCC 6 cut(s) 1018, 1603, 1786, 1934, 2134, 2582
BanII GRGCYC 5 cut(s) 507, 763, 901, 972, 1985
BauI CACGAG 1 cut(s) 1367
BbsI GAAGAC 3 cut(s) 61, 152, 1422
Bbv12I GWGCWC 2 cut(s) 763, 972
BbvCI CCTCAGC 1 cut(s) 1546
BbvI GCAGC 8 cut(s) 166, 178, 645, 699, 1319, 1852, 1861, 2503
BccI CCATC 9 cut(s) 108, 149, 287, 323, 854, 929, 1621, 1903, 2218
BceAI ACGGC 3 cut(s) 1291, 1770, 1903
BcgI CGANNNNNNTGC 4 cut(s) 211, 245, 2564, 2598
BciT130I CCWGG 8 cut(s) 449, 508, 905, 1024, 1080, 1263, 2309, 2543
BciVI GTATCC 1 cut(s) 1350
BcnI CCSGG 1 cut(s) 1387
BcoDI GTCTC 6 cut(s) 1406, 1703, 1951, 1955, 2255, 2443
BfaI CTAG 7 cut(s) 174, 188, 834, 1374, 1577, 1760, 2160
BfmI CTRYAG 4 cut(s) 659, 1305, 1554, 1623
BfoI RGCGCY 5 cut(s) 180, 1142, 1294, 1790, 2138
BfuAI ACCTGC 2 cut(s) 1221, 2627
BfuI GTATCC 1 cut(s) 1350
BglI GCCNNNNNGGC 2 cut(s) 905, 2570
BlnI CCTAGG 1 cut(s) 1373
BlpI GCTNAGC 1 cut(s) 1452
Bme1390I CCNGG 9 cut(s) 449, 508, 905, 1024, 1080, 1263, 1387, 2309, 2543
Bme18I GGWCC 8 cut(s) 32, 91, 1210, 1265, 1509, 1541, 1640, 2246
BmeT110I CYCGRG 3 cut(s) 1833, 2250, 2442
BmrFI CCNGG 9 cut(s) 449, 508, 905, 1024, 1080, 1263, 1387, 2309, 2543
BmrI ACTGGG 3 cut(s) 510, 867, 1006
BmsI GCATC 2 cut(s) 382, 798
BmtI GCTAGC 1 cut(s) 191
BmuI ACTGGG 3 cut(s) 510, 867, 1006
BoxI GACNNNNGTC 1 cut(s) 1967
BpiI GAAGAC 3 cut(s) 61, 152, 1422
BplI GAGNNNNNCTC 4 cut(s) 244, 276, 1280, 1312
BpmI CTGGAG 2 cut(s) 202, 693
Bpu10I CCTNAGC 3 cut(s) 1529, 1546, 1977
Bpu1102I GCTNAGC 1 cut(s) 1452
BpuEI CTTGAG 2 cut(s) 1307, 2403
BpuMI CCSGG 1 cut(s) 1387
Bsa29I ATCGAT 2 cut(s) 144, 1658
BsaAI YACGTR 1 cut(s) 1810
BsaBI GATNNNNATC 2 cut(s) 1361, 1443
BsaHI GRCGYC 2 cut(s) 1787, 2135
BsaWI WCCGGW 2 cut(s) 237, 1267
Bsc4I CCNNNNNNNGG 9 cut(s) 285, 569, 726, 1080, 1274, 1534, 1909, 2542, 2608
Bse1I ACTGG 6 cut(s) 505, 710, 737, 873, 1012, 1511
Bse21I CCTNAGG 1 cut(s) 2046
Bse3DI GCAATG 3 cut(s) 39, 1343, 2586
Bse8I GATNNNNATC 2 cut(s) 1361, 1443
BseAI TCCGGA 1 cut(s) 1267
BseBI CCWGG 8 cut(s) 449, 508, 905, 1024, 1080, 1263, 2309, 2543
BseCI ATCGAT 2 cut(s) 144, 1658
BseGI GGATG 6 cut(s) 274, 1444, 1690, 2187, 2218, 2268
BseJI GATNNNNATC 2 cut(s) 1361, 1443
BseLI CCNNNNNNNGG 9 cut(s) 285, 569, 726, 1080, 1274, 1534, 1909, 2542, 2608
BseMI GCAATG 3 cut(s) 39, 1343, 2586
BseMII CTCAG 6 cut(s) 1410, 1520, 1560, 1698, 2037, 2582
BseNI ACTGG 6 cut(s) 505, 710, 737, 873, 1012, 1511
BseRI GAGGAG 8 cut(s) 101, 837, 1424, 1666, 1871, 2139, 2142, 2187
BseSI GKGCMC 2 cut(s) 507, 1939
BseXI GCAGC 8 cut(s) 166, 178, 645, 699, 1319, 1852, 1861, 2503
BseYI CCCAGC 3 cut(s) 417, 799, 2403
BsgI GTGCAG 3 cut(s) 165, 397, 1084
Bsh1236I CGCG 7 cut(s) 122, 402, 1321, 1951, 2023, 2278, 2396
BshNI GGYRCC 6 cut(s) 1018, 1603, 1786, 1934, 2134, 2582
BshVI ATCGAT 2 cut(s) 144, 1658
BsiHKAI GWGCWC 2 cut(s) 763, 972
BsiHKCI CYCGRG 3 cut(s) 1833, 2250, 2442
BsiSI CCGG 3 cut(s) 238, 1268, 1386
BslFI GGGAC 4 cut(s) 131, 1223, 1906, 2071
BslI CCNNNNNNNGG 9 cut(s) 285, 569, 726, 1080, 1274, 1534, 1909, 2542, 2608
BsmAI GTCTC 6 cut(s) 1406, 1703, 1951, 1955, 2255, 2443
BsmFI GGGAC 4 cut(s) 131, 1223, 1906, 2071
BsmI GAATGC 4 cut(s) 333, 443, 1505, 2479
BsoBI CYCGRG 3 cut(s) 1833, 2250, 2442
Bsp120I GGGCCC 1 cut(s) 503
Bsp1286I GDGCHC 6 cut(s) 507, 763, 901, 972, 1939, 1985
Bsp13I TCCGGA 1 cut(s) 1267
Bsp143I GATC 8 cut(s) 145, 642, 883, 1239, 1444, 1516, 1659, 2125
Bsp1720I GCTNAGC 1 cut(s) 1452
Bsp19I CCATGG 1 cut(s) 2011
Bsp68I TCGCGA 1 cut(s) 1951
BspCNI CTCAG 6 cut(s) 1411, 1521, 1559, 1699, 2038, 2581
BspDI ATCGAT 2 cut(s) 144, 1658
BspEI TCCGGA 1 cut(s) 1267
BspFNI CGCG 7 cut(s) 122, 402, 1321, 1951, 2023, 2278, 2396
BspMAI CTGCAG 2 cut(s) 663, 1309
BspMI ACCTGC 2 cut(s) 1221, 2627
BspOI GCTAGC 1 cut(s) 191
BspPI GGATC 6 cut(s) 637, 650, 891, 1439, 1511, 2120
BspQI GCTCTTC 1 cut(s) 1554
BspT107I GGYRCC 6 cut(s) 1018, 1603, 1786, 1934, 2134, 2582
BsrBI CCGCTC 1 cut(s) 197
BsrDI GCAATG 3 cut(s) 39, 1343, 2586
BsrI ACTGG 6 cut(s) 505, 710, 737, 873, 1012, 1511
BssMI GATC 8 cut(s) 145, 642, 883, 1239, 1444, 1516, 1659, 2125
BssNI GRCGYC 2 cut(s) 1787, 2135
BssSI CACGAG 1 cut(s) 1367
BssT1I CCWWGG 4 cut(s) 553, 1127, 1373, 2011
Bst2BI CACGAG 1 cut(s) 1367
Bst2UI CCWGG 8 cut(s) 449, 508, 905, 1024, 1080, 1263, 2309, 2543
Bst4CI ACNGT 7 cut(s) 1205, 1555, 1897, 1928, 1969, 2209, 2298
Bst6I CTCTTC 6 cut(s) 78, 683, 1235, 1463, 1554, 1797
BstACI GRCGYC 2 cut(s) 1787, 2135
BstAPI GCANNNNNTGC 1 cut(s) 1874
BstBAI YACGTR 1 cut(s) 1810
BstC8I GCNNGC 3 cut(s) 189, 994, 2377
BstDEI CTNAG 9 cut(s) 1419, 1452, 1529, 1546, 1707, 1977, 2046, 2220, 2568
BstDSI CCRYGG 2 cut(s) 2011, 2327
BstEII GGTNACC 1 cut(s) 1802
BstENI CCTNNNNNAGG 1 cut(s) 1532
BstF5I GGATG 6 cut(s) 274, 1444, 1690, 2187, 2218, 2268
BstFNI CGCG 7 cut(s) 122, 402, 1321, 1951, 2023, 2278, 2396
BstH2I RGCGCY 5 cut(s) 180, 1142, 1294, 1790, 2138
BstHHI GCGC 8 cut(s) 179, 402, 609, 1141, 1293, 1789, 2137, 2497
BstKTI GATC 8 cut(s) 148, 645, 886, 1242, 1447, 1519, 1662, 2128
BstMAI GTCTC 6 cut(s) 1406, 1703, 1951, 1955, 2255, 2443
BstMBI GATC 8 cut(s) 145, 642, 883, 1239, 1444, 1516, 1659, 2125
BstNI CCWGG 8 cut(s) 449, 508, 905, 1024, 1080, 1263, 2309, 2543
BstPAI GACNNNNGTC 1 cut(s) 1967
BstPI GGTNACC 1 cut(s) 1802
BstSCI CCNGG 9 cut(s) 447, 506, 903, 1022, 1078, 1261, 1385, 2307, 2541
BstSFI CTRYAG 4 cut(s) 659, 1305, 1554, 1623
BstSLI GKGCMC 2 cut(s) 507, 1939
BstUI CGCG 7 cut(s) 122, 402, 1321, 1951, 2023, 2278, 2396
BstV1I GCAGC 8 cut(s) 166, 178, 645, 699, 1319, 1852, 1861, 2503
BstV2I GAAGAC 3 cut(s) 61, 152, 1422
BstX2I RGATCY 2 cut(s) 642, 1444
BstYI RGATCY 2 cut(s) 642, 1444
Bsu15I ATCGAT 2 cut(s) 144, 1658
Bsu36I CCTNAGG 1 cut(s) 2046
BsuI GTATCC 1 cut(s) 1350
BsuTUI ATCGAT 2 cut(s) 144, 1658
BtgI CCRYGG 2 cut(s) 2011, 2327
BtsCI GGATG 6 cut(s) 274, 1444, 1690, 2187, 2218, 2268
BtsI GCAGTG 1 cut(s) 522
BtsIMutI CAGTG 5 cut(s) 522, 880, 1512, 1551, 1933
BtuMI TCGCGA 1 cut(s) 1951
BveI ACCTGC 2 cut(s) 1221, 2627
Cac8I GCNNGC 3 cut(s) 189, 994, 2377
CaiI CAGNNNCTG 1 cut(s) 1553
CfoI GCGC 8 cut(s) 179, 402, 609, 1141, 1293, 1789, 2137, 2497
ClaI ATCGAT 2 cut(s) 144, 1658
CseI GACGC 2 cut(s) 128, 2423
Csp6I GTAC 5 cut(s) 793, 1019, 1144, 1811, 1851
CviAII CATG 5 cut(s) 317, 1220, 1252, 2012, 2605
CviQI GTAC 5 cut(s) 793, 1019, 1144, 1811, 1851
DdeI CTNAG 9 cut(s) 1419, 1452, 1529, 1546, 1707, 1977, 2046, 2220, 2568
DinI GGCGCC 2 cut(s) 1788, 2136
DpnI GATC 8 cut(s) 147, 644, 885, 1241, 1446, 1518, 1661, 2127
DpnII GATC 8 cut(s) 145, 642, 883, 1239, 1444, 1516, 1659, 2125
DrdI GACNNNNNNGTC 1 cut(s) 58
DseDI GACNNNNNNGTC 1 cut(s) 58
EaeI YGGCCR 1 cut(s) 519
Eam1104I CTCTTC 6 cut(s) 78, 683, 1235, 1463, 1554, 1797
EarI CTCTTC 6 cut(s) 78, 683, 1235, 1463, 1554, 1797
Ecl136II GAGCTC 2 cut(s) 761, 970
Eco130I CCWWGG 4 cut(s) 553, 1127, 1373, 2011
Eco24I GRGCYC 5 cut(s) 507, 763, 901, 972, 1985
Eco47I GGWCC 8 cut(s) 32, 91, 1210, 1265, 1509, 1541, 1640, 2246
Eco47III AGCGCT 3 cut(s) 178, 1140, 1292
Eco53kI GAGCTC 2 cut(s) 761, 970
Eco57I CTGAAG 2 cut(s) 102, 2073
Eco81I CCTNAGG 1 cut(s) 2046
Eco88I CYCGRG 3 cut(s) 1833, 2250, 2442
Eco91I GGTNACC 1 cut(s) 1802
EcoICRI GAGCTC 2 cut(s) 761, 970
EcoNI CCTNNNNNAGG 1 cut(s) 1532
EcoO109I RGGNCCY 4 cut(s) 504, 1210, 1640, 2246
EcoO65I GGTNACC 1 cut(s) 1802
EcoRI GAATTC 2 cut(s) 452, 511
EcoRII CCWGG 8 cut(s) 447, 506, 903, 1022, 1078, 1261, 2307, 2541
EcoT14I CCWWGG 4 cut(s) 553, 1127, 1373, 2011
EcoT38I GRGCYC 5 cut(s) 507, 763, 901, 972, 1985
EgeI GGCGCC 2 cut(s) 1788, 2136
EheI GGCGCC 2 cut(s) 1788, 2136
ErhI CCWWGG 4 cut(s) 553, 1127, 1373, 2011
FaeI CATG 5 cut(s) 320, 1223, 1255, 2015, 2608
FaqI GGGAC 4 cut(s) 131, 1223, 1906, 2071
FatI CATG 5 cut(s) 316, 1219, 1251, 2011, 2604
FauI CCCGC 5 cut(s) 1326, 1456, 1883, 2283, 2384
FblI GTMKAC 1 cut(s) 2100
FokI GGATG 6 cut(s) 281, 1451, 1697, 2194, 2225, 2255
FriOI GRGCYC 5 cut(s) 507, 763, 901, 972, 1985
FspBI CTAG 7 cut(s) 174, 188, 834, 1374, 1577, 1760, 2160
GlaI GCGC 8 cut(s) 178, 401, 608, 1140, 1292, 1788, 2136, 2496
GsaI CCCAGC 3 cut(s) 421, 803, 2407
GsuI CTGGAG 2 cut(s) 202, 693
HaeII RGCGCY 5 cut(s) 180, 1142, 1294, 1790, 2138
HapII CCGG 3 cut(s) 238, 1268, 1386
HgaI GACGC 2 cut(s) 128, 2423
HhaI GCGC 8 cut(s) 179, 402, 609, 1141, 1293, 1789, 2137, 2497
Hin1I GRCGYC 2 cut(s) 1787, 2135
Hin1II CATG 5 cut(s) 320, 1223, 1255, 2015, 2608
Hin6I GCGC 8 cut(s) 177, 400, 607, 1139, 1291, 1787, 2135, 2495
HinP1I GCGC 8 cut(s) 177, 400, 607, 1139, 1291, 1787, 2135, 2495
HindIII AAGCTT 1 cut(s) 1584
HpaII CCGG 3 cut(s) 238, 1268, 1386
HphI GGTGA 4 cut(s) 1786, 1814, 2027, 2605
Hpy166II GTNNAC 4 cut(s) 878, 1107, 1201, 2101
Hpy188I TCNGA 9 cut(s) 95, 775, 1098, 1136, 1420, 1666, 1681, 1708, 2555
Hpy8I GTNNAC 4 cut(s) 878, 1107, 1201, 2101
Hpy99I CGWCG 4 cut(s) 918, 1468, 1973, 2417
HpyAV CCTTC 4 cut(s) 646, 1344, 2048, 2211
HpyCH4III ACNGT 7 cut(s) 1205, 1555, 1897, 1928, 1969, 2209, 2298
HpyCH4IV ACGT 2 cut(s) 747, 1809
HpyF3I CTNAG 9 cut(s) 1419, 1452, 1529, 1546, 1707, 1977, 2046, 2220, 2568
HpySE526I ACGT 2 cut(s) 747, 1809
Hsp92I GRCGYC 2 cut(s) 1787, 2135
Hsp92II CATG 5 cut(s) 320, 1223, 1255, 2015, 2608
HspAI GCGC 8 cut(s) 177, 400, 607, 1139, 1291, 1787, 2135, 2495
KasI GGCGCC 2 cut(s) 1786, 2134
Kpn2I TCCGGA 1 cut(s) 1267
KpnI GGTACC 1 cut(s) 1022
Kzo9I GATC 8 cut(s) 145, 642, 883, 1239, 1444, 1516, 1659, 2125
LguI GCTCTTC 1 cut(s) 1554
LmnI GCTCC 2 cut(s) 766, 2005
Lsp1109I GCAGC 8 cut(s) 166, 178, 645, 699, 1319, 1852, 1861, 2503
LweI GCATC 2 cut(s) 382, 798
MaeI CTAG 7 cut(s) 174, 188, 834, 1374, 1577, 1760, 2160
MaeII ACGT 2 cut(s) 747, 1809
MaeIII GTNAC 4 cut(s) 422, 1700, 1802, 2191
MalI GATC 8 cut(s) 147, 644, 885, 1241, 1446, 1518, 1661, 2127
MbiI CCGCTC 1 cut(s) 197
MboI GATC 8 cut(s) 145, 642, 883, 1239, 1444, 1516, 1659, 2125
MflI RGATCY 2 cut(s) 642, 1444
MhlI GDGCHC 6 cut(s) 507, 763, 901, 972, 1939, 1985
MlsI TGGCCA 1 cut(s) 521
MluNI TGGCCA 1 cut(s) 521
Mly113I GGCGCC 2 cut(s) 1787, 2135
MlyI GAGTC 4 cut(s) 1108, 1436, 2289, 2317
MmeI TCCRAC 2 cut(s) 513, 2166
Mox20I TGGCCA 1 cut(s) 521
MroI TCCGGA 1 cut(s) 1267
MscI TGGCCA 1 cut(s) 521
MseI TTAA 2 cut(s) 1652, 1884
MslI CAYNNNNRTG 1 cut(s) 2591
Msp20I TGGCCA 1 cut(s) 521
MspI CCGG 3 cut(s) 238, 1268, 1386
MspR9I CCNGG 9 cut(s) 449, 508, 905, 1024, 1080, 1263, 1387, 2309, 2543
Mva1269I GAATGC 4 cut(s) 333, 443, 1505, 2479
MvaI CCWGG 8 cut(s) 449, 508, 905, 1024, 1080, 1263, 2309, 2543
MvnI CGCG 7 cut(s) 122, 402, 1321, 1951, 2023, 2278, 2396
NarI GGCGCC 2 cut(s) 1787, 2135
NciI CCSGG 1 cut(s) 1387
NcoI CCATGG 1 cut(s) 2011
NdeII GATC 8 cut(s) 145, 642, 883, 1239, 1444, 1516, 1659, 2125
NheI GCTAGC 1 cut(s) 187
NlaIII CATG 5 cut(s) 320, 1223, 1255, 2015, 2608
NmuCI GTSAC 3 cut(s) 422, 1700, 1802
NruI TCGCGA 1 cut(s) 1951
PaeR7I CTCGAG 2 cut(s) 1833, 2442
PciSI GCTCTTC 1 cut(s) 1554
PcsI WCGNNNNNNNCGW 2 cut(s) 1230, 1345
PctI GAATGC 4 cut(s) 333, 443, 1505, 2479
PfoI TCCNGGA 1 cut(s) 447
PleI GAGTC 4 cut(s) 1107, 1435, 2288, 2317
PluTI GGCGCC 2 cut(s) 1790, 2138
PpsI GAGTC 4 cut(s) 1107, 1435, 2288, 2317
Ppu21I YACGTR 1 cut(s) 1810
PpuMI RGGWCCY 3 cut(s) 1210, 1640, 2246
PshAI GACNNNNGTC 1 cut(s) 1967
Psp124BI GAGCTC 2 cut(s) 763, 972
Psp5II RGGWCCY 3 cut(s) 1210, 1640, 2246
Psp6I CCWGG 8 cut(s) 447, 506, 903, 1022, 1078, 1261, 2307, 2541
PspEI GGTNACC 1 cut(s) 1802
PspFI CCCAGC 3 cut(s) 417, 799, 2403
PspGI CCWGG 8 cut(s) 447, 506, 903, 1022, 1078, 1261, 2307, 2541
PspOMI GGGCCC 1 cut(s) 503
PspPPI RGGWCCY 3 cut(s) 1210, 1640, 2246
PstI CTGCAG 2 cut(s) 663, 1309
PstNI CAGNNNCTG 1 cut(s) 1553
PsuI RGATCY 2 cut(s) 642, 1444
RruI TCGCGA 1 cut(s) 1951
RsaI GTAC 5 cut(s) 794, 1020, 1145, 1812, 1852
RsaNI GTAC 5 cut(s) 793, 1019, 1144, 1811, 1851
RseI CAYNNNNRTG 1 cut(s) 2591
SacI GAGCTC 2 cut(s) 763, 972
SapI GCTCTTC 1 cut(s) 1554
SaqAI TTAA 2 cut(s) 1652, 1884
Sau3AI GATC 8 cut(s) 145, 642, 883, 1239, 1444, 1516, 1659, 2125
SchI GAGTC 4 cut(s) 1108, 1436, 2289, 2317
ScrFI CCNGG 9 cut(s) 449, 508, 905, 1024, 1080, 1263, 1387, 2309, 2543
SduI GDGCHC 6 cut(s) 507, 763, 901, 972, 1939, 1985
SfaNI GCATC 2 cut(s) 382, 798
SfcI CTRYAG 4 cut(s) 659, 1305, 1554, 1623
SfiI GGCCNNNNNGGCC 1 cut(s) 2570
SfoI GGCGCC 2 cut(s) 1788, 2136
Sfr274I CTCGAG 2 cut(s) 1833, 2442
SinI GGWCC 8 cut(s) 32, 91, 1210, 1265, 1509, 1541, 1640, 2246
SlaI CTCGAG 2 cut(s) 1833, 2442
SmiMI CAYNNNNRTG 1 cut(s) 2591
SmlI CTYRAG 4 cut(s) 1286, 1833, 2418, 2442
SmoI CTYRAG 4 cut(s) 1286, 1833, 2418, 2442
SspDI GGCGCC 2 cut(s) 1786, 2134
SspMI CTAG 7 cut(s) 174, 188, 834, 1374, 1577, 1760, 2160
SstI GAGCTC 2 cut(s) 763, 972
StyD4I CCNGG 9 cut(s) 447, 506, 903, 1022, 1078, 1261, 1385, 2307, 2541
StyI CCWWGG 4 cut(s) 553, 1127, 1373, 2011
TaaI ACNGT 7 cut(s) 1205, 1555, 1897, 1928, 1969, 2209, 2298
TaiI ACGT 2 cut(s) 750, 1812
TatI WGTACW 1 cut(s) 792
TauI GCSGC 8 cut(s) 197, 744, 1721, 1787, 2023, 2146, 2396, 2538
Tru1I TTAA 2 cut(s) 1652, 1884
Tru9I TTAA 2 cut(s) 1652, 1884
TscAI CASTG 5 cut(s) 529, 880, 1519, 1558, 1933
TseFI GTSAC 3 cut(s) 422, 1700, 1802
TseI GCWGC 8 cut(s) 179, 191, 658, 687, 1307, 1865, 1874, 2516
Tsp45I GTSAC 3 cut(s) 422, 1700, 1802
TspDTI ATGAA 6 cut(s) 1455, 1502, 1701, 2094, 2376, 2520
TspGWI ACGGA 2 cut(s) 671, 2316
TspRI CASTG 5 cut(s) 529, 880, 1519, 1558, 1933
VpaK11BI GGWCC 8 cut(s) 32, 91, 1210, 1265, 1509, 1541, 1640, 2246
XagI CCTNNNNNAGG 1 cut(s) 1532
XapI RAATTY 3 cut(s) 452, 467, 511
XcmI CCANNNNNNNNNTGG 1 cut(s) 928
XhoI CTCGAG 2 cut(s) 1833, 2442
XmaJI CCTAGG 1 cut(s) 1373
XmiI GTMKAC 1 cut(s) 2100
XspI CTAG 7 cut(s) 174, 188, 834, 1374, 1577, 1760, 2160
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.