Rmu_sc0000770.1_g000053

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000770.1
OG0000214
Physical Location & Seq
Reverse (-)
274054 .. 277085
3032 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000770.1_g000053.1.cds

Sequence Viewer

Length: 2244 bp
atggcatccaagaaaccattcgttatcgatcaggcagatgaaatcactgagaaagccacattcaactggcggactaacatgagtattcgatgtagacgtcagaccagagaggagagaagtcgactgatgggctttggtggtggtgatagtcaagcgagtctgggtcccacaccttgcgatcgttttccagatgatgttatgtcctattatgggcttcccatccgccgtcccatagcgactcttcggcaggtgcctggtgattttagcagttggggaccaaggaggaaagtgggcttctggcctaccggcgctcccgaggaaaaactttggtatcaggaggtccgagcgagagatttggcccgatgggatgcagtgggtatcacccaaaccatcgatctatgcttctgtcttccccataatactagccctgcaccgctagccgccgctctttgcttctggaacacctccagcaatacattcgatttccggtttgggcaaatgagcataactttgctgtatgttcttaccatcacagggttgcccattgatttcgacccctatgtgcatggtcagtttgatggcattcaatttcctttgagaatggatatggctggtcggggacatcacaacaaattctactcattttggcgcaactgtaactgcaccctgtgtgaccatacaggaggtatcgcattcctggaattctggctttgcaaatttatcttttgcacttcttccaacaaacctactgggccctggaattctctagccactgctctctacaatggtatttgcgttggccttgggcaacctgtattggcaaactacccggagcaagacaaactcgattcaggctgggaaaaaagggcaatagtagaggagactcctgatggagagtcttctcatgatgaagatcctgctgaggccactactgtctttgcttgcaaacgcgataagtctcaatccgtcgaagagagttttgaagttgacgaacctctggtctgtcaaaggaccactgatccctctcgcctgagtgaggatggatcctcagccactgtagaagagccaactctctcgctagttcaagcatcaactaatcccgtggcgcctcttccgtctcccagatctacagagcatcctaccattctaataacgatctccgatgacgactccttggagcatgaaatcgtggaaagccactctgaggcttctgccgcttatgaggaactgatgacgaaagagattctcgcggcactagaggtccaagagctgaatgaggtgaggtctcttcctcttggtgaccacgtaccagatattgacccgacagctcgagaggattctgtttgtaccgaagaggtggctacaaacattgagggtcctatcggcgggacagtcgccccagagatggaaaatgatactgacagtggtggttccccccaagtctcgcgaataaatgagacaaccgtcgaagccgagggccctgttcttgaatctgctccacttgcccatggtgagccgcgagttgagtttccagattctcttgcggctgaagggatagaccaacctattgaagatgaagaaactgaggaagctatccacccttttgcattggtggttcgtgatcctgtggcgcctctgccgcctcctcctcctaccagattcgagagattgatgagggtgttggaggtaactcctccttctgctgtggatgaggctaagatggtgcttcacgaatatctgggccctcaggtattggagactgacatcctcccgcgagtcttggaagctctaaggtatcttcgccaggagaaggttttgattctgtggcaatttagtgctatcgactctttgctgaatgaacttgatatggcccaccgacgtcaatcggccgcaaacacccaggctcacgatgctcaagaggctttgaatagtgtctctcgagaaatggacatctcccgcgatattttaaatgaacgatccatccgcctgcaggaactacaaatccaaatgtccgacttcaaacttcagatcgaggacctccaagcccatttagcttttgttgagaatgcgattgttgcagaagaagctaaacttgatgagcctttggctgcttctgaagaaatgggccgcaacctggcccgtatcagagatcgggccactcaggccgaagctggtgccattgcagcgaaacgccacgtggaggaactttgtttgaaattgagctttgcgggccaatctttgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

747

Amino Acids

83.07

Weight (kDa)

4.62

Isoelectric Point (pI)

58.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000214)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0079611
rosa_multiflora Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha Rh3DG208400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 238
AatII GACGTC 2 cut(s) 100, 1882
Acc36I ACCTGC 1 cut(s) 238
AccB1I GGYRCC 4 cut(s) 250, 1105, 1630, 2174
AccBSI CCGCTC 1 cut(s) 446
AccI GTMKAC 2 cut(s) 94, 121
AccII CGCG 6 cut(s) 951, 1250, 1447, 1519, 1774, 1959
AclWI GGATC 6 cut(s) 908, 1013, 1038, 1051, 1616, 1971
AcoI YGGCCR 1 cut(s) 1887
AcsI RAATTY 4 cut(s) 632, 701, 716, 760
AcuI CTGAAG 3 cut(s) 1569, 2009, 2136
AcvI CACGTG 1 cut(s) 2197
AcyI GRCGYC 4 cut(s) 97, 1106, 1631, 1879
AdeI CACNNNGTG 1 cut(s) 669
AfaI GTAC 2 cut(s) 1308, 1348
AgsI TTSAA 9 cut(s) 64, 587, 983, 1085, 1490, 1571, 1927, 2020, 2215
AjnI CCWGG 6 cut(s) 253, 696, 755, 1803, 1899, 2133
AjuI GAANNNNNNNTTGG 1 cut(s) 34
AloI GAACNNNNNNTCC 4 cut(s) 1965, 1986, 1997, 2018
AluBI AGCT 8 cut(s) 1270, 1328, 1592, 1787, 2054, 2087, 2171, 2223
AluI AGCT 8 cut(s) 1270, 1328, 1592, 1787, 2054, 2087, 2171, 2223
Alw26I GTCTC 8 cut(s) 875, 963, 1122, 1290, 1447, 1451, 1751, 1939
AlwI GGATC 6 cut(s) 908, 1013, 1038, 1051, 1616, 1971
AlwNI CAGNNNCTG 1 cut(s) 1055
Ama87I CYCGRG 3 cut(s) 314, 1329, 1938
ApaI GGGCCC 3 cut(s) 756, 1481, 1745
ApeKI GCWGC 2 cut(s) 2108, 2183
ApoI RAATTY 4 cut(s) 632, 701, 716, 760
ArsI GACNNNNNNTTYG 2 cut(s) 984, 1016
Asp700I GAANNNNTTC 1 cut(s) 17
AspLEI GCGC 4 cut(s) 311, 651, 1108, 1633
AsuC2I CCSGG 1 cut(s) 830
AsuHPI GGTGA 6 cut(s) 155, 269, 373, 1291, 1310, 1523
AsuNHI GCTAGC 1 cut(s) 436
AvaI CYCGRG 3 cut(s) 314, 1329, 1938
AvaII GGWCC 7 cut(s) 164, 275, 340, 1011, 1261, 1376, 2035
AxyI CCTNAGG 1 cut(s) 1746
BaeGI GKGCMC 3 cut(s) 756, 1481, 1745
BaeI ACNNNNGTAYC 2 cut(s) 314, 347
BamHI GGATCC 1 cut(s) 1043
BanI GGYRCC 4 cut(s) 250, 1105, 1630, 2174
BanII GRGCYC 3 cut(s) 756, 1481, 1745
BbrPI CACGTG 1 cut(s) 2197
BbsI GAAGAC 2 cut(s) 401, 891
BbvCI CCTCAGC 2 cut(s) 921, 1048
BbvI GCAGC 2 cut(s) 2095, 2195
BceAI ACGGC 1 cut(s) 210
BcgI CGANNNNNNTGC 4 cut(s) 460, 494, 2156, 2190
BciT130I CCWGG 6 cut(s) 255, 698, 757, 1805, 1901, 2135
BcnI CCSGG 1 cut(s) 830
BcoDI GTCTC 8 cut(s) 875, 963, 1122, 1290, 1447, 1451, 1751, 1939
BfaI CTAG 5 cut(s) 423, 437, 767, 1079, 1256
BfmI CTRYAG 3 cut(s) 1056, 1128, 1988
BfoI RGCGCY 3 cut(s) 312, 1109, 1634
BfuAI ACCTGC 1 cut(s) 238
BglI GCCNNNNNGGC 1 cut(s) 2162
BglII AGATCT 1 cut(s) 1124
Bme1390I CCNGG 7 cut(s) 255, 698, 757, 830, 1805, 1901, 2135
Bme18I GGWCC 7 cut(s) 164, 275, 340, 1011, 1261, 1376, 2035
BmeT110I CYCGRG 3 cut(s) 314, 1329, 1938
BmrFI CCNGG 7 cut(s) 255, 698, 757, 830, 1805, 1901, 2135
BmrI ACTGGG 1 cut(s) 759
BmsI GCATC 5 cut(s) 14, 358, 1097, 1144, 1900
BmtI GCTAGC 1 cut(s) 440
BmuI ACTGGG 1 cut(s) 759
BoxI GACNNNNGTC 1 cut(s) 1463
BpiI GAAGAC 2 cut(s) 401, 891
BpmI CTGGAG 1 cut(s) 451
Bpu10I CCTNAGC 2 cut(s) 921, 1048
BpuEI CTTGAG 1 cut(s) 1899
BpuMI CCSGG 1 cut(s) 830
Bsa29I ATCGAT 2 cut(s) 27, 393
BsaAI YACGTR 2 cut(s) 1306, 2197
BsaBI GATNNNNATC 1 cut(s) 912
BsaHI GRCGYC 4 cut(s) 97, 1106, 1631, 1879
BsaI GGTCTC 1 cut(s) 1290
BsaJI CCNNGG 9 cut(s) 278, 315, 755, 802, 1101, 1173, 1473, 1507, 1899
BsaWI WCCGGW 1 cut(s) 486
BsaXI ACNNNNNCTCC 2 cut(s) 295, 325
Bse118I RCCGGY 1 cut(s) 305
Bse1I ACTGG 2 cut(s) 71, 754
Bse21I CCTNAGG 1 cut(s) 1746
Bse3DI GCAATG 1 cut(s) 2178
Bse8I GATNNNNATC 1 cut(s) 912
BseBI CCWGG 6 cut(s) 255, 698, 757, 1805, 1901, 2135
BseCI ATCGAT 2 cut(s) 27, 393
BseDI CCNNGG 9 cut(s) 278, 315, 755, 802, 1101, 1173, 1473, 1507, 1899
BseGI GGATG 8 cut(s) 5, 219, 373, 1045, 1135, 1714, 1764, 1980
BseJI GATNNNNATC 1 cut(s) 912
BseMI GCAATG 1 cut(s) 2178
BseMII CTCAG 8 cut(s) 39, 912, 1022, 1062, 1194, 1575, 1760, 2174
BseNI ACTGG 2 cut(s) 71, 754
BseRI GAGGAG 5 cut(s) 125, 893, 1635, 1638, 1683
BseSI GKGCMC 3 cut(s) 756, 1481, 1745
BseX3I CGGCCG 1 cut(s) 1887
BseXI GCAGC 2 cut(s) 2095, 2195
BseYI CCCAGC 1 cut(s) 855
BsgI GTGCAG 2 cut(s) 414, 646
Bsh1236I CGCG 6 cut(s) 951, 1250, 1447, 1519, 1774, 1959
Bsh1285I CGRYCG 2 cut(s) 181, 1890
BshNI GGYRCC 4 cut(s) 250, 1105, 1630, 2174
BshVI ATCGAT 2 cut(s) 27, 393
BsiEI CGRYCG 2 cut(s) 181, 1890
BsiHKCI CYCGRG 3 cut(s) 314, 1329, 1938
BsiSI CCGG 3 cut(s) 306, 487, 830
BslFI GGGAC 5 cut(s) 150, 213, 288, 633, 1402
BsmAI GTCTC 8 cut(s) 875, 963, 1122, 1290, 1447, 1451, 1751, 1939
BsmBI CGTCTC 1 cut(s) 1122
BsmFI GGGAC 5 cut(s) 150, 213, 288, 633, 1402
BsmI GAATGC 3 cut(s) 582, 692, 2071
Bso31I GGTCTC 1 cut(s) 1290
BsoBI CYCGRG 3 cut(s) 314, 1329, 1938
Bsp120I GGGCCC 3 cut(s) 752, 1477, 1741
Bsp1286I GDGCHC 3 cut(s) 756, 1481, 1745
Bsp19I CCATGG 1 cut(s) 1507
Bsp68I TCGCGA 1 cut(s) 1447
BspCNI CTCAG 8 cut(s) 40, 913, 1023, 1061, 1195, 1576, 1759, 2173
BspDI ATCGAT 2 cut(s) 27, 393
BspFNI CGCG 6 cut(s) 951, 1250, 1447, 1519, 1774, 1959
BspHI TCATGA 1 cut(s) 904
BspMAI CTGCAG 1 cut(s) 1992
BspMI ACCTGC 1 cut(s) 238
BspOI GCTAGC 1 cut(s) 440
BspPI GGATC 6 cut(s) 908, 1013, 1038, 1051, 1616, 1971
BspQI GCTCTTC 1 cut(s) 1056
BspT107I GGYRCC 4 cut(s) 250, 1105, 1630, 2174
BspTNI GGTCTC 1 cut(s) 1290
BsrBI CCGCTC 1 cut(s) 446
BsrDI GCAATG 1 cut(s) 2178
BsrFI RCCGGY 1 cut(s) 305
BsrI ACTGG 2 cut(s) 71, 754
BssAI RCCGGY 1 cut(s) 305
BssECI CCNNGG 9 cut(s) 278, 315, 755, 802, 1101, 1173, 1473, 1507, 1899
BssNI GRCGYC 4 cut(s) 97, 1106, 1631, 1879
BssT1I CCWWGG 4 cut(s) 278, 802, 1173, 1507
Bst2UI CCWGG 6 cut(s) 255, 698, 757, 1805, 1901, 2135
Bst4CI ACNGT 6 cut(s) 656, 934, 1057, 1393, 1424, 1465
Bst6I CTCTTC 6 cut(s) 246, 966, 1056, 1116, 1293, 1347
BstACI GRCGYC 4 cut(s) 97, 1106, 1631, 1879
BstBAI YACGTR 2 cut(s) 1306, 2197
BstC8I GCNNGC 4 cut(s) 438, 943, 1988, 2230
BstDSI CCRYGG 2 cut(s) 1101, 1507
BstEII GGTNACC 1 cut(s) 1298
BstENI CCTNNNNNAGG 1 cut(s) 1034
BstF5I GGATG 8 cut(s) 5, 219, 373, 1045, 1135, 1714, 1764, 1980
BstFNI CGCG 6 cut(s) 951, 1250, 1447, 1519, 1774, 1959
BstH2I RGCGCY 3 cut(s) 312, 1109, 1634
BstHHI GCGC 4 cut(s) 311, 651, 1108, 1633
BstMAI GTCTC 8 cut(s) 875, 963, 1122, 1290, 1447, 1451, 1751, 1939
BstMCI CGRYCG 2 cut(s) 181, 1890
BstNI CCWGG 6 cut(s) 255, 698, 757, 1805, 1901, 2135
BstPAI GACNNNNGTC 1 cut(s) 1463
BstPI GGTNACC 1 cut(s) 1298
BstSCI CCNGG 7 cut(s) 253, 696, 755, 828, 1803, 1899, 2133
BstSFI CTRYAG 3 cut(s) 1056, 1128, 1988
BstSLI GKGCMC 3 cut(s) 756, 1481, 1745
BstUI CGCG 6 cut(s) 951, 1250, 1447, 1519, 1774, 1959
BstV1I GCAGC 2 cut(s) 2095, 2195
BstV2I GAAGAC 2 cut(s) 401, 891
BstX2I RGATCY 3 cut(s) 913, 1043, 1124
BstYI RGATCY 3 cut(s) 913, 1043, 1124
BstZI CGGCCG 1 cut(s) 1887
Bsu15I ATCGAT 2 cut(s) 27, 393
Bsu36I CCTNAGG 1 cut(s) 1746
BsuTUI ATCGAT 2 cut(s) 27, 393
BtgI CCRYGG 2 cut(s) 1101, 1507
BtsCI GGATG 8 cut(s) 5, 219, 373, 1045, 1135, 1714, 1764, 1980
BtsI GCAGTG 2 cut(s) 378, 771
BtsIMutI CAGTG 6 cut(s) 45, 378, 771, 1014, 1053, 1429
BtuMI TCGCGA 1 cut(s) 1447
BveI ACCTGC 1 cut(s) 238
Cac8I GCNNGC 4 cut(s) 438, 943, 1988, 2230
CaiI CAGNNNCTG 1 cut(s) 1055
CciI TCATGA 1 cut(s) 904
CfoI GCGC 4 cut(s) 311, 651, 1108, 1633
Cfr10I RCCGGY 1 cut(s) 305
ClaI ATCGAT 2 cut(s) 27, 393
Csp6I GTAC 2 cut(s) 1307, 1347
CviAII CATG 5 cut(s) 79, 566, 905, 1181, 1508
CviQI GTAC 2 cut(s) 1307, 1347
DinI GGCGCC 2 cut(s) 1107, 1632
DraI TTTAAA 1 cut(s) 1968
DraIII CACNNNGTG 1 cut(s) 669
EaeI YGGCCR 1 cut(s) 1887
EagI CGGCCG 1 cut(s) 1887
Eam1104I CTCTTC 6 cut(s) 246, 966, 1056, 1116, 1293, 1347
EarI CTCTTC 6 cut(s) 246, 966, 1056, 1116, 1293, 1347
EciI GGCGGA 3 cut(s) 85, 212, 1973
EclXI CGGCCG 1 cut(s) 1887
Eco130I CCWWGG 4 cut(s) 278, 802, 1173, 1507
Eco24I GRGCYC 3 cut(s) 756, 1481, 1745
Eco31I GGTCTC 1 cut(s) 1290
Eco47I GGWCC 7 cut(s) 164, 275, 340, 1011, 1261, 1376, 2035
Eco52I CGGCCG 1 cut(s) 1887
Eco57I CTGAAG 3 cut(s) 1569, 2009, 2136
Eco72I CACGTG 1 cut(s) 2197
Eco81I CCTNAGG 1 cut(s) 1746
Eco88I CYCGRG 3 cut(s) 314, 1329, 1938
Eco91I GGTNACC 1 cut(s) 1298
EcoNI CCTNNNNNAGG 1 cut(s) 1034
EcoO109I RGGNCCY 7 cut(s) 164, 753, 1376, 1477, 1478, 1742, 2035
EcoO65I GGTNACC 1 cut(s) 1298
EcoRI GAATTC 2 cut(s) 701, 760
EcoRII CCWGG 6 cut(s) 253, 696, 755, 1803, 1899, 2133
EcoT14I CCWWGG 4 cut(s) 278, 802, 1173, 1507
EcoT38I GRGCYC 3 cut(s) 756, 1481, 1745
EgeI GGCGCC 2 cut(s) 1107, 1632
EheI GGCGCC 2 cut(s) 1107, 1632
ErhI CCWWGG 4 cut(s) 278, 802, 1173, 1507
Esp3I CGTCTC 1 cut(s) 1122
FaeI CATG 5 cut(s) 82, 569, 908, 1184, 1511
FalI AAGNNNNNCTT 2 cut(s) 2076, 2108
FaqI GGGAC 5 cut(s) 150, 213, 288, 633, 1402
FatI CATG 5 cut(s) 78, 565, 904, 1180, 1507
FauI CCCGC 4 cut(s) 1379, 1779, 1964, 2221
FblI GTMKAC 2 cut(s) 94, 121
FokI GGATG 7 cut(s) 206, 380, 1052, 1122, 1721, 1751, 1967
FriOI GRGCYC 3 cut(s) 756, 1481, 1745
FspBI CTAG 5 cut(s) 423, 437, 767, 1079, 1256
GlaI GCGC 4 cut(s) 310, 650, 1107, 1632
GsaI CCCAGC 1 cut(s) 859
GsuI CTGGAG 1 cut(s) 451
HaeII RGCGCY 3 cut(s) 312, 1109, 1634
HapII CCGG 3 cut(s) 306, 487, 830
HhaI GCGC 4 cut(s) 311, 651, 1108, 1633
Hin1I GRCGYC 4 cut(s) 97, 1106, 1631, 1879
Hin1II CATG 5 cut(s) 82, 569, 908, 1184, 1511
Hin6I GCGC 4 cut(s) 309, 649, 1106, 1631
HinP1I GCGC 4 cut(s) 309, 649, 1106, 1631
HincII GTYRAC 2 cut(s) 122, 988
HindII GTYRAC 2 cut(s) 122, 988
HpaII CCGG 3 cut(s) 306, 487, 830
HphI GGTGA 6 cut(s) 155, 269, 373, 1291, 1310, 1523
Hpy166II GTNNAC 3 cut(s) 95, 122, 988
Hpy188I TCNGA 8 cut(s) 102, 344, 1162, 1204, 2014, 2028, 2116, 2147
Hpy8I GTNNAC 3 cut(s) 95, 122, 988
Hpy99I CGWCG 3 cut(s) 971, 1469, 1881
HpyAV CCTTC 3 cut(s) 1544, 1707, 1804
HpyCH4III ACNGT 6 cut(s) 656, 934, 1057, 1393, 1424, 1465
HpyCH4IV ACGT 4 cut(s) 97, 1305, 1879, 2196
HpySE526I ACGT 4 cut(s) 97, 1305, 1879, 2196
Hsp92I GRCGYC 4 cut(s) 97, 1106, 1631, 1879
Hsp92II CATG 5 cut(s) 82, 569, 908, 1184, 1511
HspAI GCGC 4 cut(s) 309, 649, 1106, 1631
KasI GGCGCC 2 cut(s) 1105, 1630
KflI GGGWCCC 1 cut(s) 164
LguI GCTCTTC 1 cut(s) 1056
LmnI GCTCC 4 cut(s) 316, 832, 1177, 1501
Lsp1109I GCAGC 2 cut(s) 2095, 2195
LweI GCATC 5 cut(s) 14, 358, 1097, 1144, 1900
MaeI CTAG 5 cut(s) 423, 437, 767, 1079, 1256
MaeII ACGT 4 cut(s) 97, 1305, 1879, 2196
MaeIII GTNAC 4 cut(s) 656, 671, 1298, 1687
MbiI CCGCTC 1 cut(s) 446
MflI RGATCY 3 cut(s) 913, 1043, 1124
MhlI GDGCHC 3 cut(s) 756, 1481, 1745
MluCI AATT 7 cut(s) 587, 632, 701, 716, 760, 1829, 2216
Mly113I GGCGCC 2 cut(s) 1106, 1631
MlyI GAGTC 7 cut(s) 166, 232, 877, 905, 1163, 1785, 1838
MmeI TCCRAC 3 cut(s) 762, 1662, 2037
MroXI GAANNNNTTC 1 cut(s) 17
MseI TTAA 1 cut(s) 1967
MspI CCGG 3 cut(s) 306, 487, 830
MspR9I CCNGG 7 cut(s) 255, 698, 757, 830, 1805, 1901, 2135
Mva1269I GAATGC 3 cut(s) 582, 692, 2071
MvaI CCWGG 6 cut(s) 255, 698, 757, 1805, 1901, 2135
MvnI CGCG 6 cut(s) 951, 1250, 1447, 1519, 1774, 1959
NarI GGCGCC 2 cut(s) 1106, 1631
NciI CCSGG 1 cut(s) 830
NcoI CCATGG 1 cut(s) 1507
NheI GCTAGC 1 cut(s) 436
NlaIII CATG 5 cut(s) 82, 569, 908, 1184, 1511
NmeAIII GCCGAG 1 cut(s) 1498
NmuCI GTSAC 2 cut(s) 671, 1298
NruI TCGCGA 1 cut(s) 1447
PaeR7I CTCGAG 2 cut(s) 1329, 1938
PagI TCATGA 1 cut(s) 904
PaqCI CACCTGC 1 cut(s) 238
PciSI GCTCTTC 1 cut(s) 1056
PcsI WCGNNNNNNNCGW 1 cut(s) 94
PctI GAATGC 3 cut(s) 582, 692, 2071
PdmI GAANNNNTTC 1 cut(s) 17
PfeI GAWTC 7 cut(s) 848, 1243, 1337, 1490, 1535, 1659, 1819
PfoI TCCNGGA 1 cut(s) 696
Ple19I CGATCG 1 cut(s) 181
PleI GAGTC 7 cut(s) 165, 232, 877, 904, 1163, 1784, 1838
PluTI GGCGCC 2 cut(s) 1109, 1634
PmaCI CACGTG 1 cut(s) 2197
PmlI CACGTG 1 cut(s) 2197
PpsI GAGTC 7 cut(s) 165, 232, 877, 904, 1163, 1784, 1838
Ppu21I YACGTR 2 cut(s) 1306, 2197
PpuMI RGGWCCY 3 cut(s) 164, 1376, 2035
PshAI GACNNNNGTC 1 cut(s) 1463
Psp5II RGGWCCY 3 cut(s) 164, 1376, 2035
Psp6I CCWGG 6 cut(s) 253, 696, 755, 1803, 1899, 2133
PspCI CACGTG 1 cut(s) 2197
PspEI GGTNACC 1 cut(s) 1298
PspFI CCCAGC 1 cut(s) 855
PspGI CCWGG 6 cut(s) 253, 696, 755, 1803, 1899, 2133
PspOMI GGGCCC 3 cut(s) 752, 1477, 1741
PspPPI RGGWCCY 3 cut(s) 164, 1376, 2035
PstI CTGCAG 1 cut(s) 1992
PstNI CAGNNNCTG 1 cut(s) 1055
PsuI RGATCY 3 cut(s) 913, 1043, 1124
PvuI CGATCG 1 cut(s) 181
RruI TCGCGA 1 cut(s) 1447
RsaI GTAC 2 cut(s) 1308, 1348
RsaNI GTAC 2 cut(s) 1307, 1347
SalI GTCGAC 1 cut(s) 120
SapI GCTCTTC 1 cut(s) 1056
SaqAI TTAA 1 cut(s) 1967
SbfI CCTGCAGG 1 cut(s) 1992
SchI GAGTC 7 cut(s) 166, 232, 877, 905, 1163, 1785, 1838
ScrFI CCNGG 7 cut(s) 255, 698, 757, 830, 1805, 1901, 2135
SdaI CCTGCAGG 1 cut(s) 1992
SduI GDGCHC 3 cut(s) 756, 1481, 1745
SfaNI GCATC 5 cut(s) 14, 358, 1097, 1144, 1900
SfcI CTRYAG 3 cut(s) 1056, 1128, 1988
SfiI GGCCNNNNNGGCC 1 cut(s) 2162
SfoI GGCGCC 2 cut(s) 1107, 1632
Sfr274I CTCGAG 2 cut(s) 1329, 1938
SinI GGWCC 7 cut(s) 164, 275, 340, 1011, 1261, 1376, 2035
SlaI CTCGAG 2 cut(s) 1329, 1938
SmlI CTYRAG 3 cut(s) 1329, 1914, 1938
SmoI CTYRAG 3 cut(s) 1329, 1914, 1938
Sse8387I CCTGCAGG 1 cut(s) 1992
Sse9I AATT 7 cut(s) 587, 632, 701, 716, 760, 1829, 2216
SspDI GGCGCC 2 cut(s) 1105, 1630
SspMI CTAG 5 cut(s) 423, 437, 767, 1079, 1256
StyD4I CCNGG 7 cut(s) 253, 696, 755, 828, 1803, 1899, 2133
StyI CCWWGG 4 cut(s) 278, 802, 1173, 1507
TaaI ACNGT 6 cut(s) 656, 934, 1057, 1393, 1424, 1465
TaiI ACGT 4 cut(s) 100, 1308, 1882, 2199
TasI AATT 7 cut(s) 587, 632, 701, 716, 760, 1829, 2216
TauI GCSGC 9 cut(s) 443, 446, 1217, 1253, 1519, 1547, 1642, 1892, 2130
TfiI GAWTC 7 cut(s) 848, 1243, 1337, 1490, 1535, 1659, 1819
Tru1I TTAA 1 cut(s) 1967
Tru9I TTAA 1 cut(s) 1967
TscAI CASTG 6 cut(s) 52, 378, 778, 1021, 1060, 1429
TseFI GTSAC 2 cut(s) 671, 1298
TseI GCWGC 2 cut(s) 2108, 2183
Tsp45I GTSAC 2 cut(s) 671, 1298
TspDTI ATGAA 6 cut(s) 54, 924, 1197, 1590, 1872, 1986
TspGWI ACGGA 2 cut(s) 955, 1104
TspRI CASTG 6 cut(s) 52, 378, 778, 1021, 1060, 1429
VpaK11BI GGWCC 7 cut(s) 164, 275, 340, 1011, 1261, 1376, 2035
XagI CCTNNNNNAGG 1 cut(s) 1034
XapI RAATTY 4 cut(s) 632, 701, 716, 760
XhoI CTCGAG 2 cut(s) 1329, 1938
XmiI GTMKAC 2 cut(s) 94, 121
XmnI GAANNNNTTC 1 cut(s) 17
XspI CTAG 5 cut(s) 423, 437, 767, 1079, 1256
ZraI GACGTC 2 cut(s) 98, 1880
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.