Rmu_sc0004881.1_g000008

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004881.1
OG0000214
Physical Location & Seq
Reverse (-)
16251 .. 20535
4285 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004881.1_g000008.1.cds

Sequence Viewer

Length: 3030 bp
atggcatccaagaaaccattcgttatcgaacaggcagatgaaatcactgagaaagccgcattcacctggcggactaacatgagtgttcgatgtagaagtcagaccggagaggagagaagtcgactgatgggctttggtggctgtgatagtcaagcgagtctgggtcccatacctcgcgatcgtttgccagatgatgctatggcctattatgggcttcccatccgccgtcccatagcggctcttcggcaggatgtgcgagcgagagatttggcccgatgggatgcggtgggtatcacccaaaccatccatctatgcttctgtcttcccaataatactagccctgcaccgctagcagccgctctttgcttctggaacacctccagcaatacattcaatttccagtttgggcagatgagcataactctgctggatgttcttaccatcacggggttgcccattgactttgacccctatgtgcatggtcagtttgatggcattcaattttctttgagaatggatatggctggtcgggggcatcacagtagatcctacccatcctggcgcgactattactgcacccagcgtgaccatacaggaggtatcgcattcctggaattctggctttgcaaatttatcttttgcacttcttccaacaaacctactgagccctggaattctctggtcactgctctctacaatggtatttgctttggccttgggcaacctgtattgggtgcgttatatcgctccctttatagagccgtaatgcgcccatttgatactaacattagtggccccttctggatctttgccttttggctgcagatttatttccctttcttccatcgcggtgatattccaaaggaacctccagttgattcccttttggggaactggctttgccgcaacgtaaggtatcgagctccaccctactccgagtgttttatttacttgtacttgctgggagagattccggacccaaaaatagtcctttctaggctattccctcctccccttgatgatggctttctgcccagtggacgggatcatagcgaaagagccctcctggcctttcgtcgcgccatctcctgcttggatattcgtcttgccaccgaccgccggagattagccccacctgggtctgccccctttcagagtcagtttactttgatagtgattcccccttgggtcagagcgctgtaccccctcaacgatgtcgacgatgattatgatgattggtggaaagaagtgtccgtgaactgttgggacctgccacatgacgaactcttcgtcctgctctttcgtggcatgagtagtcctggtacggaggaccgcgagattcttgagcgcttctccaaacctgcagcacaacccctgcgacctattctaccttctcgctcatcgtgtccagggatacaaatccacgagcctagggcaacagcaatagcagaggagacttctgagggagagtctttgcatgatgaagatcccactgaggccactgctgtctttgcttgcaaacgcgatcgagctcaattcgtcgaagagagttttaaagatgacgaacctctaggaatgaccactgatccctctcgcctgagcgaggctggaccctcagccactgcagaagagccaactctctttctagttcaagcatcaactaaccctgtggcgcctcttccgtctcccacatctacagagcatctgcaaggtcctaccattctaataacgatctctaatgacgactcctcggaggatgaaagcgtggaaagccactctgagacttctgccgtttatgaggaactgatgatgacagagattctcgcggcactagaggtccaagaggattctttttgtaccgaggaggtggctgcaaatgctgagggtcctatcggcgggacagttgccccagagatggaaaatgatactgacggtggtggtgccccccaagtctcacaaataaatgagacaaccgtcgaagccgagggctttgtgcttgaatctgctccacttgcccatggtaagcctctagttgagtttccagattctcctgcggctgaagggacagaccaacctgttgaagatgaagaaactgaggaaactgtccacccttttgcattggtggttcgtgatcctgtggcacctccgccgcctcctcctcctaccagattcgagagattgatgagggtgttggaggtaactcctccttctgctgtgaatgaggctaagatggtgcttcatgaacatctgggtcctcgggtattggagagtgacatcctcccgcgagtcttggaagctctaaggtatcttcgccaggagaaggcattgaccctgcagcaatttaatgttattgacgatctgctgaatgaacttggtagggcccgccaacttcaaccggccgcgaacgcccaggctcacgacactcgaaaggctttgaatagcctctctcgagaaatggacatctctcgcggtattttaaatgagcgaaccatccgcctgcgggaactacaaatccaaagctccgacttcaaacttcggatcaaggacctccataccggtttagccttagttgaaaatgcgattgctgcagaagaagcccaacttgatgaacctctagctgcttctgaagaaatgggccgtaacctggcccgtgcaaccccttgtttcgtccttctggaatcctgcaacgacaatgccaggcttcagattggtttagaaacgcgagggggctccgagtgtgggatccacgatcatgcgagatcatctttgttagaatcccacacacggagcgaaatagggagagggaggaaggccactatgtgggtcgtttttcctcctctgtttccttccttctggagggcacaacacgggccgggtccagaaggaaggaaacagaggaggaaagacgaacctcaatttggcttccctcccttccccgatttgctccaagtgggggatcctaataaagatggtctcgcacgatcgtggatctcacactcggagccccctcgtgtttctaaaccaatctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

1009

Amino Acids

112.7

Weight (kDa)

4.98

Isoelectric Point (pI)

57.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000214)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0079611
rosa_multiflora Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha Rh3DG208400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1278, 1369
AccB1I GGYRCC 3 cut(s) 1672, 1940, 2140
AccB7I CCANNNNNTGG 1 cut(s) 2820
AccBSI CCGCTC 1 cut(s) 359
AccI GTMKAC 2 cut(s) 121, 1218
AccIII TCCGGA 1 cut(s) 973
AcoI YGGCCR 1 cut(s) 2397
AcsI RAATTY 3 cut(s) 614, 629, 673
AcuI CTGAAG 3 cut(s) 2079, 2646, 2687
AcyI GRCGYC 1 cut(s) 1673
AdeI CACNNNGTG 1 cut(s) 2820
AfaI GTAC 4 cut(s) 956, 1202, 1324, 1858
AfeI AGCGCT 2 cut(s) 1197, 1349
AgeI ACCGGT 1 cut(s) 2555
AgsI TTSAA 9 cut(s) 394, 500, 1652, 2000, 2081, 2393, 2437, 2530, 2573
AjuI GAANNNNNNNTTGG 3 cut(s) 34, 2901, 2933
AleI CACNNNNGTG 1 cut(s) 2983
AloI GAACNNNNNNTCC 4 cut(s) 1275, 1307, 2496, 2528
AluBI AGCT 5 cut(s) 923, 1532, 2297, 2520, 2618
AluI AGCT 5 cut(s) 923, 1532, 2297, 2520, 2618
Alw21I GWGCWC 2 cut(s) 925, 1534
Alw26I GTCTC 6 cut(s) 1448, 1689, 1775, 1957, 1961, 2978
AlwNI CAGNNNCTG 1 cut(s) 1622
Ama87I CYCGRG 2 cut(s) 2256, 2448
Aor13HI TCCGGA 1 cut(s) 973
Aor51HI AGCGCT 2 cut(s) 1197, 1349
ApaI GGGCCC 1 cut(s) 2383
ApeKI GCWGC 7 cut(s) 353, 820, 1364, 1871, 2335, 2585, 2618
ApoI RAATTY 3 cut(s) 614, 629, 673
ArsI GACNNNNNNTTYG 4 cut(s) 1271, 1275, 1303, 1307
AsiGI ACCGGT 1 cut(s) 2555
Asp700I GAANNNNTTC 1 cut(s) 17
AspA2I CCTAGG 1 cut(s) 1430
AspLEI GCGC 6 cut(s) 564, 771, 1082, 1198, 1350, 1675
AsuC2I CCSGG 1 cut(s) 2874
AsuHPI GGTGA 3 cut(s) 55, 286, 863
AsuNHI GCTAGC 1 cut(s) 349
AvaI CYCGRG 2 cut(s) 2256, 2448
AvrII CCTAGG 1 cut(s) 1430
BaeGI GKGCMC 3 cut(s) 1945, 2383, 2863
BamHI GGATCC 2 cut(s) 2742, 2956
BanI GGYRCC 3 cut(s) 1672, 1940, 2140
BanII GRGCYC 7 cut(s) 669, 925, 1063, 1534, 2383, 2732, 3006
BauI CACGAG 2 cut(s) 1424, 3009
BbsI GAAGAC 1 cut(s) 314
Bbv12I GWGCWC 2 cut(s) 925, 1534
BbvCI CCTCAGC 2 cut(s) 1615, 1881
BbvI GCAGC 7 cut(s) 365, 807, 1376, 1858, 2347, 2572, 2605
BceAI ACGGC 4 cut(s) 210, 746, 1775, 2622
BciVI GTATCC 1 cut(s) 1407
BcnI CCSGG 1 cut(s) 2874
BcoDI GTCTC 6 cut(s) 1448, 1689, 1775, 1957, 1961, 2978
BfaI CTAG 9 cut(s) 336, 350, 996, 1431, 1571, 1646, 1832, 2030, 2615
BfmI CTRYAG 6 cut(s) 821, 1362, 1623, 1695, 2333, 2586
BfoI RGCGCY 3 cut(s) 1199, 1351, 1676
BfuAI ACCTGC 2 cut(s) 1278, 1369
BfuI GTATCC 1 cut(s) 1407
BglI GCCNNNNNGGC 1 cut(s) 1067
BlnI CCTAGG 1 cut(s) 1430
BmeT110I CYCGRG 2 cut(s) 2256, 2448
BmrI ACTGGG 1 cut(s) 1029
BmsI GCATC 6 cut(s) 14, 184, 271, 544, 1664, 1711
BmtI GCTAGC 1 cut(s) 353
BmuI ACTGGG 1 cut(s) 1029
BoxI GACNNNNGTC 1 cut(s) 1973
BpiI GAAGAC 1 cut(s) 314
BplI GAGNNNNNCTC 4 cut(s) 406, 438, 1337, 1369
BpmI CTGGAG 3 cut(s) 364, 855, 2875
Bpu10I CCTNAGC 3 cut(s) 1598, 1615, 1881
BpuEI CTTGAG 1 cut(s) 1364
BpuMI CCSGG 1 cut(s) 2874
BsaBI GATNNNNATC 2 cut(s) 1418, 1485
BsaHI GRCGYC 1 cut(s) 1673
BsaI GGTCTC 1 cut(s) 2978
BsaWI WCCGGW 3 cut(s) 104, 973, 2555
Bse118I RCCGGY 2 cut(s) 2395, 2555
Bse1I ACTGG 4 cut(s) 400, 872, 899, 1035
Bse8I GATNNNNATC 2 cut(s) 1418, 1485
BseAI TCCGGA 1 cut(s) 973
BseJI GATNNNNATC 2 cut(s) 1418, 1485
BseMII CTCAG 9 cut(s) 39, 654, 1452, 1485, 1589, 1629, 1770, 1872, 2085
BseNI ACTGG 4 cut(s) 400, 872, 899, 1035
BseSI GKGCMC 3 cut(s) 1945, 2383, 2863
BseX3I CGGCCG 1 cut(s) 2397
BseXI GCAGC 7 cut(s) 365, 807, 1376, 1858, 2347, 2572, 2605
BseYI CCCAGC 2 cut(s) 579, 961
BsgI GTGCAG 2 cut(s) 327, 559
Bsh1285I CGRYCG 5 cut(s) 181, 1117, 1528, 2400, 2984
BshNI GGYRCC 3 cut(s) 1672, 1940, 2140
BshTI ACCGGT 1 cut(s) 2555
BsiEI CGRYCG 5 cut(s) 181, 1117, 1528, 2400, 2984
BsiHKAI GWGCWC 2 cut(s) 925, 1534
BsiHKCI CYCGRG 2 cut(s) 2256, 2448
BsiSI CCGG 6 cut(s) 105, 974, 1120, 2396, 2556, 2873
BslFI GGGAC 5 cut(s) 150, 213, 1280, 1912, 2077
BsmAI GTCTC 6 cut(s) 1448, 1689, 1775, 1957, 1961, 2978
BsmBI CGTCTC 1 cut(s) 1689
BsmFI GGGAC 5 cut(s) 150, 213, 1280, 1912, 2077
BsmI GAATGC 3 cut(s) 59, 495, 605
Bso31I GGTCTC 1 cut(s) 2978
BsoBI CYCGRG 2 cut(s) 2256, 2448
Bsp120I GGGCCC 1 cut(s) 2379
Bsp1286I GDGCHC 9 cut(s) 669, 925, 1063, 1534, 1945, 2383, 2732, 2863, 3006
Bsp13I TCCGGA 1 cut(s) 973
Bsp19I CCATGG 1 cut(s) 2017
Bsp68I TCGCGA 1 cut(s) 177
BspCNI CTCAG 9 cut(s) 40, 655, 1453, 1486, 1590, 1628, 1771, 1873, 2086
BspEI TCCGGA 1 cut(s) 973
BspHI TCATGA 1 cut(s) 2239
BspMAI CTGCAG 5 cut(s) 825, 1366, 1627, 2337, 2590
BspMI ACCTGC 2 cut(s) 1278, 1369
BspOI GCTAGC 1 cut(s) 353
BspQI GCTCTTC 2 cut(s) 246, 1623
BspT107I GGYRCC 3 cut(s) 1672, 1940, 2140
BspTNI GGTCTC 1 cut(s) 2978
BsrBI CCGCTC 1 cut(s) 359
BsrFI RCCGGY 2 cut(s) 2395, 2555
BsrI ACTGG 4 cut(s) 400, 872, 899, 1035
BssAI RCCGGY 2 cut(s) 2395, 2555
BssNI GRCGYC 1 cut(s) 1673
BssSI CACGAG 2 cut(s) 1424, 3009
BssT1I CCWWGG 4 cut(s) 715, 1184, 1430, 2017
Bst2BI CACGAG 2 cut(s) 1424, 3009
Bst4CI ACNGT 6 cut(s) 542, 1262, 1903, 1934, 1975, 2104
Bst6I CTCTTC 5 cut(s) 246, 1292, 1539, 1623, 1683
BstACI GRCGYC 1 cut(s) 1673
BstAPI GCANNNNNTGC 1 cut(s) 253
BstC8I GCNNGC 5 cut(s) 258, 351, 1516, 2383, 2498
BstDSI CCRYGG 1 cut(s) 2017
BstENI CCTNNNNNAGG 2 cut(s) 1601, 2854
BstH2I RGCGCY 3 cut(s) 1199, 1351, 1676
BstHHI GCGC 6 cut(s) 564, 771, 1082, 1198, 1350, 1675
BstMAI GTCTC 6 cut(s) 1448, 1689, 1775, 1957, 1961, 2978
BstMCI CGRYCG 5 cut(s) 181, 1117, 1528, 2400, 2984
BstPAI GACNNNNGTC 1 cut(s) 1973
BstSFI CTRYAG 6 cut(s) 821, 1362, 1623, 1695, 2333, 2586
BstSLI GKGCMC 3 cut(s) 1945, 2383, 2863
BstV1I GCAGC 7 cut(s) 365, 807, 1376, 1858, 2347, 2572, 2605
BstV2I GAAGAC 1 cut(s) 314
BstX2I RGATCY 6 cut(s) 545, 804, 1486, 2742, 2956, 2988
BstYI RGATCY 6 cut(s) 545, 804, 1486, 2742, 2956, 2988
BstZI CGGCCG 1 cut(s) 2397
BsuI GTATCC 1 cut(s) 1407
BtgI CCRYGG 1 cut(s) 2017
BtgZI GCGATG 1 cut(s) 830
BtsI GCAGTG 3 cut(s) 684, 1500, 1620
BtsIMutI CAGTG 7 cut(s) 45, 684, 1042, 1491, 1500, 1581, 1620
BtuMI TCGCGA 1 cut(s) 177
BveI ACCTGC 2 cut(s) 1278, 1369
Cac8I GCNNGC 5 cut(s) 258, 351, 1516, 2383, 2498
CaiI CAGNNNCTG 1 cut(s) 1622
CciI TCATGA 1 cut(s) 2239
CfoI GCGC 6 cut(s) 564, 771, 1082, 1198, 1350, 1675
Cfr10I RCCGGY 2 cut(s) 2395, 2555
Csp6I GTAC 4 cut(s) 955, 1201, 1323, 1857
CspAI ACCGGT 1 cut(s) 2555
CviAII CATG 8 cut(s) 79, 479, 1277, 1309, 1478, 2018, 2240, 2753
CviQI GTAC 4 cut(s) 955, 1201, 1323, 1857
DinI GGCGCC 1 cut(s) 1674
DraI TTTAAA 2 cut(s) 1555, 2478
DraIII CACNNNGTG 1 cut(s) 2820
EaeI YGGCCR 1 cut(s) 2397
EagI CGGCCG 1 cut(s) 2397
Eam1104I CTCTTC 5 cut(s) 246, 1292, 1539, 1623, 1683
EarI CTCTTC 5 cut(s) 246, 1292, 1539, 1623, 1683
EciI GGCGGA 4 cut(s) 85, 212, 2136, 2483
Ecl136II GAGCTC 2 cut(s) 923, 1532
EclXI CGGCCG 1 cut(s) 2397
Eco130I CCWWGG 4 cut(s) 715, 1184, 1430, 2017
Eco24I GRGCYC 7 cut(s) 669, 925, 1063, 1534, 2383, 2732, 3006
Eco31I GGTCTC 1 cut(s) 2978
Eco47III AGCGCT 2 cut(s) 1197, 1349
Eco52I CGGCCG 1 cut(s) 2397
Eco53kI GAGCTC 2 cut(s) 923, 1532
Eco57I CTGAAG 3 cut(s) 2079, 2646, 2687
Eco88I CYCGRG 2 cut(s) 2256, 2448
EcoICRI GAGCTC 2 cut(s) 923, 1532
EcoNI CCTNNNNNAGG 2 cut(s) 1601, 2854
EcoO109I RGGNCCY 7 cut(s) 164, 1267, 1712, 1886, 2252, 2379, 2545
EcoRI GAATTC 2 cut(s) 614, 673
EcoT14I CCWWGG 4 cut(s) 715, 1184, 1430, 2017
EcoT38I GRGCYC 7 cut(s) 669, 925, 1063, 1534, 2383, 2732, 3006
EgeI GGCGCC 1 cut(s) 1674
EheI GGCGCC 1 cut(s) 1674
ErhI CCWWGG 4 cut(s) 715, 1184, 1430, 2017
Esp3I CGTCTC 1 cut(s) 1689
FaeI CATG 8 cut(s) 82, 482, 1280, 1312, 1481, 2021, 2243, 2756
FalI AAGNNNNNCTT 2 cut(s) 2586, 2618
FaqI GGGAC 5 cut(s) 150, 213, 1280, 1912, 2077
FatI CATG 8 cut(s) 78, 478, 1276, 1308, 1477, 2017, 2239, 2752
FauI CCCGC 4 cut(s) 1889, 2289, 2390, 2493
FblI GTMKAC 2 cut(s) 121, 1218
FokI GGATG 9 cut(s) 206, 263, 290, 293, 443, 541, 1769, 2261, 2477
FriOI GRGCYC 7 cut(s) 669, 925, 1063, 1534, 2383, 2732, 3006
FspBI CTAG 9 cut(s) 336, 350, 996, 1431, 1571, 1646, 1832, 2030, 2615
GlaI GCGC 6 cut(s) 563, 770, 1081, 1197, 1349, 1674
GsaI CCCAGC 2 cut(s) 583, 965
GsuI CTGGAG 3 cut(s) 364, 855, 2875
HaeII RGCGCY 3 cut(s) 1199, 1351, 1676
HapII CCGG 6 cut(s) 105, 974, 1120, 2396, 2556, 2873
HhaI GCGC 6 cut(s) 564, 771, 1082, 1198, 1350, 1675
Hin1I GRCGYC 1 cut(s) 1673
Hin1II CATG 8 cut(s) 82, 482, 1280, 1312, 1481, 2021, 2243, 2756
Hin6I GCGC 6 cut(s) 562, 769, 1080, 1196, 1348, 1673
HinP1I GCGC 6 cut(s) 562, 769, 1080, 1196, 1348, 1673
HincII GTYRAC 2 cut(s) 122, 1219
HindII GTYRAC 2 cut(s) 122, 1219
HpaII CCGG 6 cut(s) 105, 974, 1120, 2396, 2556, 2873
HphI GGTGA 3 cut(s) 55, 286, 863
Hpy166II GTNNAC 6 cut(s) 122, 1040, 1164, 1219, 1258, 2107
Hpy8I GTNNAC 6 cut(s) 122, 1040, 1164, 1219, 1258, 2107
Hpy99I CGWCG 4 cut(s) 1080, 1223, 1544, 1979
HpyCH4III ACNGT 6 cut(s) 542, 1262, 1903, 1934, 1975, 2104
HpyCH4IV ACGT 1 cut(s) 909
HpySE526I ACGT 1 cut(s) 909
Hsp92I GRCGYC 1 cut(s) 1673
Hsp92II CATG 8 cut(s) 82, 482, 1280, 1312, 1481, 2021, 2243, 2756
HspAI GCGC 6 cut(s) 562, 769, 1080, 1196, 1348, 1673
KasI GGCGCC 1 cut(s) 1672
KflI GGGWCCC 1 cut(s) 164
Kpn2I TCCGGA 1 cut(s) 973
LguI GCTCTTC 2 cut(s) 246, 1623
LmnI GCTCC 8 cut(s) 752, 928, 2011, 2525, 2735, 2787, 2949, 3001
Lsp1109I GCAGC 7 cut(s) 365, 807, 1376, 1858, 2347, 2572, 2605
LweI GCATC 6 cut(s) 14, 184, 271, 544, 1664, 1711
MaeI CTAG 9 cut(s) 336, 350, 996, 1431, 1571, 1646, 1832, 2030, 2615
MaeII ACGT 1 cut(s) 909
MaeIII GTNAC 5 cut(s) 584, 682, 2197, 2270, 2639
MbiI CCGCTC 1 cut(s) 359
MflI RGATCY 6 cut(s) 545, 804, 1486, 2742, 2956, 2988
MhlI GDGCHC 9 cut(s) 669, 925, 1063, 1534, 1945, 2383, 2732, 2863, 3006
MluCI AATT 8 cut(s) 394, 500, 614, 629, 673, 1535, 2339, 2915
Mly113I GGCGCC 1 cut(s) 1673
MlyI GAGTC 5 cut(s) 166, 1165, 1478, 1739, 2295
MmeI TCCRAC 3 cut(s) 675, 2172, 2547
MroI TCCGGA 1 cut(s) 973
MroXI GAANNNNTTC 1 cut(s) 17
MseI TTAA 3 cut(s) 1554, 2343, 2477
MslI CAYNNNNRTG 3 cut(s) 849, 2751, 2983
MspI CCGG 6 cut(s) 105, 974, 1120, 2396, 2556, 2873
Mva1269I GAATGC 3 cut(s) 59, 495, 605
NarI GGCGCC 1 cut(s) 1673
NciI CCSGG 1 cut(s) 2874
NcoI CCATGG 1 cut(s) 2017
NheI GCTAGC 1 cut(s) 349
NlaIII CATG 8 cut(s) 82, 482, 1280, 1312, 1481, 2021, 2243, 2756
NmeAIII GCCGAG 1 cut(s) 2008
NmuCI GTSAC 3 cut(s) 584, 682, 2270
NruI TCGCGA 1 cut(s) 177
OliI CACNNNNGTG 1 cut(s) 2983
PaeR7I CTCGAG 1 cut(s) 2448
PagI TCATGA 1 cut(s) 2239
PciSI GCTCTTC 2 cut(s) 246, 1623
PcsI WCGNNNNNNNCGW 2 cut(s) 1218, 1287
PctI GAATGC 3 cut(s) 59, 495, 605
PdmI GAANNNNTTC 1 cut(s) 17
PflMI CCANNNNNTGG 1 cut(s) 2820
PfoI TCCNGGA 1 cut(s) 609
PinAI ACCGGT 1 cut(s) 2555
Ple19I CGATCG 3 cut(s) 181, 1528, 2984
PleI GAGTC 5 cut(s) 165, 1164, 1477, 1739, 2294
PluTI GGCGCC 1 cut(s) 1676
PpsI GAGTC 5 cut(s) 165, 1164, 1477, 1739, 2294
PpuMI RGGWCCY 6 cut(s) 164, 1267, 1712, 1886, 2252, 2545
PshAI GACNNNNGTC 1 cut(s) 1973
Psp124BI GAGCTC 2 cut(s) 925, 1534
Psp5II RGGWCCY 6 cut(s) 164, 1267, 1712, 1886, 2252, 2545
PspFI CCCAGC 2 cut(s) 579, 961
PspOMI GGGCCC 1 cut(s) 2379
PspPPI RGGWCCY 6 cut(s) 164, 1267, 1712, 1886, 2252, 2545
PstI CTGCAG 5 cut(s) 825, 1366, 1627, 2337, 2590
PstNI CAGNNNCTG 1 cut(s) 1622
PsuI RGATCY 6 cut(s) 545, 804, 1486, 2742, 2956, 2988
PvuI CGATCG 3 cut(s) 181, 1528, 2984
RruI TCGCGA 1 cut(s) 177
RsaI GTAC 4 cut(s) 956, 1202, 1324, 1858
RsaNI GTAC 4 cut(s) 955, 1201, 1323, 1857
RseI CAYNNNNRTG 3 cut(s) 849, 2751, 2983
SacI GAGCTC 2 cut(s) 925, 1534
SalI GTCGAC 2 cut(s) 120, 1217
SapI GCTCTTC 2 cut(s) 246, 1623
SaqAI TTAA 3 cut(s) 1554, 2343, 2477
SchI GAGTC 5 cut(s) 166, 1165, 1478, 1739, 2295
SduI GDGCHC 9 cut(s) 669, 925, 1063, 1534, 1945, 2383, 2732, 2863, 3006
SfaNI GCATC 6 cut(s) 14, 184, 271, 544, 1664, 1711
SfcI CTRYAG 6 cut(s) 821, 1362, 1623, 1695, 2333, 2586
SfoI GGCGCC 1 cut(s) 1674
Sfr274I CTCGAG 1 cut(s) 2448
SlaI CTCGAG 1 cut(s) 2448
SmiMI CAYNNNNRTG 3 cut(s) 849, 2751, 2983
SmlI CTYRAG 2 cut(s) 1343, 2448
SmoI CTYRAG 2 cut(s) 1343, 2448
Sse9I AATT 8 cut(s) 394, 500, 614, 629, 673, 1535, 2339, 2915
SspDI GGCGCC 1 cut(s) 1672
SspMI CTAG 9 cut(s) 336, 350, 996, 1431, 1571, 1646, 1832, 2030, 2615
SstI GAGCTC 2 cut(s) 925, 1534
StyI CCWWGG 4 cut(s) 715, 1184, 1430, 2017
TaaI ACNGT 6 cut(s) 542, 1262, 1903, 1934, 1975, 2104
TaiI ACGT 1 cut(s) 912
TasI AATT 8 cut(s) 394, 500, 614, 629, 673, 1535, 2339, 2915
TatI WGTACW 1 cut(s) 954
TauI GCSGC 8 cut(s) 59, 239, 359, 906, 1829, 2057, 2152, 2402
Tru1I TTAA 3 cut(s) 1554, 2343, 2477
Tru9I TTAA 3 cut(s) 1554, 2343, 2477
TscAI CASTG 7 cut(s) 52, 691, 1042, 1498, 1507, 1588, 1627
TseFI GTSAC 3 cut(s) 584, 682, 2270
TseI GCWGC 7 cut(s) 353, 820, 1364, 1871, 2335, 2585, 2618
Tsp45I GTSAC 3 cut(s) 584, 682, 2270
TspDTI ATGAA 8 cut(s) 54, 1497, 1773, 2100, 2228, 2256, 2382, 2622
TspGWI ACGGA 4 cut(s) 1243, 1340, 1671, 2800
TspRI CASTG 7 cut(s) 52, 691, 1042, 1498, 1507, 1588, 1627
Van91I CCANNNNNTGG 1 cut(s) 2820
XagI CCTNNNNNAGG 2 cut(s) 1601, 2854
XapI RAATTY 3 cut(s) 614, 629, 673
XcmI CCANNNNNNNNNTGG 1 cut(s) 1090
XhoI CTCGAG 1 cut(s) 2448
XmaJI CCTAGG 1 cut(s) 1430
XmiI GTMKAC 2 cut(s) 121, 1218
XmnI GAANNNNTTC 1 cut(s) 17
XspI CTAG 9 cut(s) 336, 350, 996, 1431, 1571, 1646, 1832, 2030, 2615
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.