Rmu_sc0004085.1_g000015

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004085.1
OG0000214
Physical Location & Seq
Forward (+)
28243 .. 30842
2600 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004085.1_g000015.1.cds

Sequence Viewer

Length: 2190 bp
atggttccttgcgacctagaaatggcatccaagaaaccattcgttatcgatcaagcagatgaaatcactgagaaagccgcgttcaactggcggactaacatgagtgttcgatgtagacgtcaaaccggagaggagagaagccgactgaggggctttggtggcggtgatagtcaagcgagtctgggtcccacacctcgcgatcgtttgccagacgatgctatagcctattatgggcttcccatccgccgtcccatagtggctcttcggcaagtgcctggcgattttagcagttggggaccaaggaggaaagtgggcttctggcctactgtcactcccgaggaaaaggtttggtatcaggaggtccgagtgagagatttggccagatgggacgcggtgggtatcacccaaaccatcgatctatgcttctgtctgccctataatactagccctgcaccgctagccgccgctctttgcttctggaacacctccaggaatacattcgagttccggtttgggcaaatgagcataactttgctggatgttcttaccatcacggggctgcctattgattttgacccctatgtgcatggtcaatttgatggcattcaatttcctttgagaatggatatggctgggcgagggcattacagcaaatcctacccattctggcgcgactattactgcacccagcgagaccatacaggaggtatcgcattcctggaattctggctttgcaaatttatcttttgcacttcttccaacaaacctactgggccctggaattctctggccactgctctctacaatggtatttgcgttggccttgggcaacctgtattgggtgcattatatcgttccctttatagggccgtaatgcgccccttcgagaccgacattagtggccctttctggattcttgccttttggctgcagatttatttcccttgcttccgtcgcgatgatattccaaaggaacctccagtcgattcccttttggggaactggctttgccgcaatgtaaggtatcgagctccaccctactctgagtgttttatttacttgtacttgctgggagagaagccggacccaaaaatagtcctttctaggcgtttccctcctccccttgacgatggctttctacccaatggacgggatcatagcgaaagagccctcctggcctttcatcgtgccatctcctgcttggatattcttctgccaccgactgcagcgctataccccctcaacgatgtcgatgatgactatgttgattggtggaaagaagtgccagtgaactgttgggacctgccacatgacgaactcttcgtcctgatctttcgtggcatgaatagccctggtccggaggaccgcgagattcttgagcgctgctccaaacctgcagaacaacccccgcgacctattctaccttctcgctcattgtgtccagggatacaaatccacgagcctagggcaacacaaactacccggagcaggacagcctctgttcaggccgggaaacaaaaggcaatagcagaggagacttctaagggagagtcttcgcatgatgaagatcctgctgaggccactgctgtctttgcttgcaaacgcgatcgagctcaattcgtcaaagagagttttgatgatgacgaacctctgggaatgcgactggtccgtcaaaggaccactgatccctctcgcctgagtgaagctggaccctcagccactgcagaagagccatttatctcgctagttcaagcatcaactaaccctgtggcacctctcccatctcccactatagagcatctgcaaggtcctaccattctaataacgatctctgatgacgactcctcggaggatgaaagcatggaaagccactctgaaacttctgccgcttatgaggaacatatgacgacagagattctagcggcactagaggttcaagaggtgaatgaggcggggcatcttcctcttggtgaccacgtaccagatattgacccgacagctcgagaggtaagccactgtttggccaatactttccatttccctttagatccaaccctactctctgacatttctgaatctgaccaggattctgtttgtaccaaggaggtggcaacaaacactgagggtcctatcggtgggacagtcgccccagagatggaaaatgatactaacggtggtggtgccccctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

729

Amino Acids

81.72

Weight (kDa)

4.91

Isoelectric Point (pI)

51.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000214)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0079611
rosa_multiflora Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha Rh3DG208400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1668
AatII GACGTC 1 cut(s) 121
Acc36I ACCTGC 2 cut(s) 1311, 1402
AccB1I GGYRCC 2 cut(s) 1771, 2180
AccB7I CCANNNNNTGG 1 cut(s) 2020
AccBSI CCGCTC 1 cut(s) 467
AccI GTMKAC 1 cut(s) 115
AccII CGCG 8 cut(s) 80, 198, 392, 672, 957, 1368, 1411, 1605
AccIII TCCGGA 1 cut(s) 1357
AclWI GGATC 4 cut(s) 1161, 1562, 1679, 2042
AcoI YGGCCR 3 cut(s) 378, 789, 2022
AcsI RAATTY 3 cut(s) 722, 737, 781
AcyI GRCGYC 1 cut(s) 118
AfaI GTAC 3 cut(s) 1064, 1980, 2098
AfeI AGCGCT 2 cut(s) 1230, 1382
AgsI TTSAA 4 cut(s) 85, 608, 1751, 1937
AjnI CCWGG 8 cut(s) 274, 488, 717, 776, 1173, 1351, 1441, 2082
AjuI GAANNNNNNNTTGG 2 cut(s) 23, 55
AloI GAACNNNNNNTCC 2 cut(s) 1308, 1340
AluBI AGCT 4 cut(s) 1031, 1613, 1706, 2000
AluI AGCT 4 cut(s) 1031, 1613, 1706, 2000
Alw21I GWGCWC 2 cut(s) 1033, 1615
Alw26I GTCTC 3 cut(s) 687, 881, 1529
AlwI GGATC 4 cut(s) 1161, 1562, 1679, 2042
AlwNI CAGNNNCTG 2 cut(s) 1499, 1721
Ama87I CYCGRG 2 cut(s) 335, 2001
Aor13HI TCCGGA 1 cut(s) 1357
Aor51HI AGCGCT 2 cut(s) 1230, 1382
ApaI GGGCCC 1 cut(s) 777
ApeKI GCWGC 4 cut(s) 559, 928, 1226, 1383
ApoI RAATTY 3 cut(s) 722, 737, 781
ArsI GACNNNNNNTTYG 4 cut(s) 1304, 1308, 1336, 1340
Asp700I GAANNNNTTC 2 cut(s) 38, 497
AspA2I CCTAGG 1 cut(s) 1463
AspLEI GCGC 4 cut(s) 672, 879, 1231, 1383
AsuC2I CCSGG 2 cut(s) 1483, 1510
AsuHPI GGTGA 4 cut(s) 176, 394, 1954, 1982
AsuNHI GCTAGC 1 cut(s) 457
AvaI CYCGRG 2 cut(s) 335, 2001
AvrII CCTAGG 1 cut(s) 1463
BaeGI GKGCMC 2 cut(s) 777, 2185
BalI TGGCCA 3 cut(s) 380, 791, 2024
BanI GGYRCC 2 cut(s) 1771, 2180
BanII GRGCYC 4 cut(s) 777, 1033, 1171, 1615
BauI CACGAG 1 cut(s) 1457
BbsI GAAGAC 1 cut(s) 1545
Bbv12I GWGCWC 2 cut(s) 1033, 1615
BbvCI CCTCAGC 2 cut(s) 1575, 1714
BbvI GCAGC 4 cut(s) 546, 915, 1238, 1370
BccI CCATC 9 cut(s) 248, 378, 419, 557, 593, 1124, 1199, 1789, 2149
BceAI ACGGC 2 cut(s) 231, 854
BciT130I CCWGG 8 cut(s) 276, 490, 719, 778, 1175, 1353, 1443, 2084
BciVI GTATCC 1 cut(s) 1440
BcnI CCSGG 2 cut(s) 1483, 1510
BcoDI GTCTC 3 cut(s) 687, 881, 1529
BfaI CTAG 8 cut(s) 17, 444, 458, 1104, 1464, 1745, 1919, 1928
BfmI CTRYAG 6 cut(s) 219, 929, 1224, 1395, 1722, 1791
BfoI RGCGCY 2 cut(s) 1232, 1384
BfuAI ACCTGC 2 cut(s) 1311, 1402
BfuI GTATCC 1 cut(s) 1440
BglI GCCNNNNNGGC 1 cut(s) 1175
BlnI CCTAGG 1 cut(s) 1463
BmeT110I CYCGRG 2 cut(s) 335, 2001
BmrI ACTGGG 1 cut(s) 780
BmsI GCATC 5 cut(s) 35, 205, 1763, 1807, 1966
BmtI GCTAGC 1 cut(s) 461
BmuI ACTGGG 1 cut(s) 780
BpiI GAAGAC 1 cut(s) 1545
BplI GAGNNNNNCTC 2 cut(s) 1370, 1402
BpmI CTGGAG 2 cut(s) 472, 963
Bpu10I CCTNAGC 2 cut(s) 1575, 1714
BpuEI CTTGAG 1 cut(s) 1397
BpuMI CCSGG 2 cut(s) 1483, 1510
Bsa29I ATCGAT 2 cut(s) 48, 414
BsaAI YACGTR 1 cut(s) 1978
BsaBI GATNNNNATC 2 cut(s) 1451, 1566
BsaHI GRCGYC 1 cut(s) 118
BsaI GGTCTC 2 cut(s) 687, 881
BsaJI CCNNGG 9 cut(s) 299, 336, 776, 823, 1351, 1442, 1463, 1845, 2100
BsaWI WCCGGW 3 cut(s) 125, 507, 1357
BsaXI ACNNNNNCTCC 2 cut(s) 316, 346
Bse1I ACTGG 6 cut(s) 92, 775, 980, 1007, 1286, 1668
Bse3DI GCAATG 1 cut(s) 1021
Bse8I GATNNNNATC 2 cut(s) 1451, 1566
BseAI TCCGGA 1 cut(s) 1357
BseBI CCWGG 8 cut(s) 276, 490, 719, 778, 1175, 1353, 1443, 2084
BseCI ATCGAT 2 cut(s) 48, 414
BseDI CCNNGG 9 cut(s) 299, 336, 776, 823, 1351, 1442, 1463, 1845, 2100
BseGI GGATG 4 cut(s) 26, 240, 544, 1858
BseJI GATNNNNATC 2 cut(s) 1451, 1566
BseMI GCAATG 1 cut(s) 1021
BseMII CTCAG 7 cut(s) 60, 137, 1035, 1566, 1688, 1728, 2112
BseNI ACTGG 6 cut(s) 92, 775, 980, 1007, 1286, 1668
BseRI GAGGAG 4 cut(s) 146, 1107, 1547, 1834
BseSI GKGCMC 2 cut(s) 777, 2185
BseXI GCAGC 4 cut(s) 546, 915, 1238, 1370
BseYI CCCAGC 3 cut(s) 632, 687, 1069
BsgI GTGCAG 2 cut(s) 435, 667
Bsh1236I CGCG 8 cut(s) 80, 198, 392, 672, 957, 1368, 1411, 1605
Bsh1285I CGRYCG 2 cut(s) 202, 1609
BshNI GGYRCC 2 cut(s) 1771, 2180
BshVI ATCGAT 2 cut(s) 48, 414
BsiEI CGRYCG 2 cut(s) 202, 1609
BsiHKAI GWGCWC 2 cut(s) 1033, 1615
BsiHKCI CYCGRG 2 cut(s) 335, 2001
BsiSI CCGG 6 cut(s) 126, 508, 1082, 1358, 1483, 1509
BslFI GGGAC 6 cut(s) 171, 234, 309, 401, 1313, 2152
BsmAI GTCTC 3 cut(s) 687, 881, 1529
BsmFI GGGAC 6 cut(s) 171, 234, 309, 401, 1313, 2152
BsmI GAATGC 3 cut(s) 603, 713, 1662
Bso31I GGTCTC 2 cut(s) 687, 881
BsoBI CYCGRG 2 cut(s) 335, 2001
Bsp120I GGGCCC 1 cut(s) 773
Bsp1286I GDGCHC 5 cut(s) 777, 1033, 1171, 1615, 2185
Bsp13I TCCGGA 1 cut(s) 1357
Bsp68I TCGCGA 2 cut(s) 198, 957
BspCNI CTCAG 7 cut(s) 61, 138, 1036, 1567, 1689, 1727, 2113
BspDI ATCGAT 2 cut(s) 48, 414
BspEI TCCGGA 1 cut(s) 1357
BspFNI CGCG 8 cut(s) 80, 198, 392, 672, 957, 1368, 1411, 1605
BspMAI CTGCAG 4 cut(s) 933, 1228, 1399, 1726
BspMI ACCTGC 2 cut(s) 1311, 1402
BspOI GCTAGC 1 cut(s) 461
BspPI GGATC 4 cut(s) 1161, 1562, 1679, 2042
BspQI GCTCTTC 2 cut(s) 267, 1722
BspT107I GGYRCC 2 cut(s) 1771, 2180
BspTNI GGTCTC 2 cut(s) 687, 881
BsrBI CCGCTC 1 cut(s) 467
BsrDI GCAATG 1 cut(s) 1021
BsrI ACTGG 6 cut(s) 92, 775, 980, 1007, 1286, 1668
BssECI CCNNGG 9 cut(s) 299, 336, 776, 823, 1351, 1442, 1463, 1845, 2100
BssNI GRCGYC 1 cut(s) 118
BssSI CACGAG 1 cut(s) 1457
BssT1I CCWWGG 4 cut(s) 299, 823, 1463, 2100
Bst2BI CACGAG 1 cut(s) 1457
Bst2UI CCWGG 8 cut(s) 276, 490, 719, 778, 1175, 1353, 1443, 2084
Bst4CI ACNGT 5 cut(s) 328, 1295, 2018, 2143, 2174
Bst6I CTCTTC 3 cut(s) 267, 1325, 1722
BstACI GRCGYC 1 cut(s) 118
BstBAI YACGTR 1 cut(s) 1978
BstC8I GCNNGC 2 cut(s) 459, 1597
BstDEI CTNAG 8 cut(s) 69, 146, 1044, 1542, 1575, 1697, 1714, 2121
BstEII GGTNACC 1 cut(s) 1970
BstF5I GGATG 4 cut(s) 26, 240, 544, 1858
BstFNI CGCG 8 cut(s) 80, 198, 392, 672, 957, 1368, 1411, 1605
BstH2I RGCGCY 2 cut(s) 1232, 1384
BstHHI GCGC 4 cut(s) 672, 879, 1231, 1383
BstMAI GTCTC 3 cut(s) 687, 881, 1529
BstMCI CGRYCG 2 cut(s) 202, 1609
BstMWI GCNNNNNNNGC 8 cut(s) 159, 285, 458, 954, 1175, 1347, 1592, 1866
BstNI CCWGG 8 cut(s) 276, 490, 719, 778, 1175, 1353, 1443, 2084
BstPI GGTNACC 1 cut(s) 1970
BstSFI CTRYAG 6 cut(s) 219, 929, 1224, 1395, 1722, 1791
BstSLI GKGCMC 2 cut(s) 777, 2185
BstUI CGCG 8 cut(s) 80, 198, 392, 672, 957, 1368, 1411, 1605
BstV1I GCAGC 4 cut(s) 546, 915, 1238, 1370
BstV2I GAAGAC 1 cut(s) 1545
BstX2I RGATCY 2 cut(s) 1567, 2047
BstXI CCANNNNNNTGG 1 cut(s) 2107
BstYI RGATCY 2 cut(s) 1567, 2047
Bsu15I ATCGAT 2 cut(s) 48, 414
BsuI GTATCC 1 cut(s) 1440
BsuTUI ATCGAT 2 cut(s) 48, 414
BtgZI GCGATG 1 cut(s) 972
BtsCI GGATG 4 cut(s) 26, 240, 544, 1858
BtsI GCAGTG 3 cut(s) 792, 1581, 1719
BtsIMutI CAGTG 8 cut(s) 66, 792, 1293, 1581, 1680, 1719, 2014, 2118
BtuMI TCGCGA 2 cut(s) 198, 957
BveI ACCTGC 2 cut(s) 1311, 1402
Cac8I GCNNGC 2 cut(s) 459, 1597
CaiI CAGNNNCTG 2 cut(s) 1499, 1721
CfoI GCGC 4 cut(s) 672, 879, 1231, 1383
ClaI ATCGAT 2 cut(s) 48, 414
CseI GACGC 1 cut(s) 398
Csp6I GTAC 3 cut(s) 1063, 1979, 2097
CviAII CATG 6 cut(s) 100, 587, 1310, 1342, 1559, 1861
CviQI GTAC 3 cut(s) 1063, 1979, 2097
DdeI CTNAG 8 cut(s) 69, 146, 1044, 1542, 1575, 1697, 1714, 2121
DrdI GACNNNNNNGTC 1 cut(s) 1668
DseDI GACNNNNNNGTC 1 cut(s) 1668
EaeI YGGCCR 3 cut(s) 378, 789, 2022
Eam1104I CTCTTC 3 cut(s) 267, 1325, 1722
EarI CTCTTC 3 cut(s) 267, 1325, 1722
EciI GGCGGA 2 cut(s) 106, 233
Ecl136II GAGCTC 2 cut(s) 1031, 1613
Eco130I CCWWGG 4 cut(s) 299, 823, 1463, 2100
Eco24I GRGCYC 4 cut(s) 777, 1033, 1171, 1615
Eco31I GGTCTC 2 cut(s) 687, 881
Eco47III AGCGCT 2 cut(s) 1230, 1382
Eco53kI GAGCTC 2 cut(s) 1031, 1613
Eco88I CYCGRG 2 cut(s) 335, 2001
Eco91I GGTNACC 1 cut(s) 1970
EcoICRI GAGCTC 2 cut(s) 1031, 1613
EcoO109I RGGNCCY 5 cut(s) 185, 774, 1300, 1808, 2126
EcoO65I GGTNACC 1 cut(s) 1970
EcoRI GAATTC 2 cut(s) 722, 781
EcoRII CCWGG 8 cut(s) 274, 488, 717, 776, 1173, 1351, 1441, 2082
EcoT14I CCWWGG 4 cut(s) 299, 823, 1463, 2100
EcoT38I GRGCYC 4 cut(s) 777, 1033, 1171, 1615
ErhI CCWWGG 4 cut(s) 299, 823, 1463, 2100
FaeI CATG 6 cut(s) 103, 590, 1313, 1345, 1562, 1864
FaqI GGGAC 6 cut(s) 171, 234, 309, 401, 1313, 2152
FatI CATG 6 cut(s) 99, 586, 1309, 1341, 1558, 1860
FauI CCCGC 2 cut(s) 1416, 1945
FauNDI CATATG 1 cut(s) 1902
FblI GTMKAC 1 cut(s) 115
FokI GGATG 4 cut(s) 13, 227, 551, 1865
FriOI GRGCYC 4 cut(s) 777, 1033, 1171, 1615
FspBI CTAG 8 cut(s) 17, 444, 458, 1104, 1464, 1745, 1919, 1928
GlaI GCGC 4 cut(s) 671, 878, 1230, 1382
GsaI CCCAGC 3 cut(s) 636, 691, 1073
GsuI CTGGAG 2 cut(s) 472, 963
HaeII RGCGCY 2 cut(s) 1232, 1384
HapII CCGG 6 cut(s) 126, 508, 1082, 1358, 1483, 1509
HgaI GACGC 1 cut(s) 398
HhaI GCGC 4 cut(s) 672, 879, 1231, 1383
Hin1I GRCGYC 1 cut(s) 118
Hin1II CATG 6 cut(s) 103, 590, 1313, 1345, 1562, 1864
Hin6I GCGC 4 cut(s) 670, 877, 1229, 1381
HinP1I GCGC 4 cut(s) 670, 877, 1229, 1381
HinfI GANTC 9 cut(s) 178, 913, 986, 1372, 1550, 1841, 1915, 2075, 2087
HpaII CCGG 6 cut(s) 126, 508, 1082, 1358, 1483, 1509
HphI GGTGA 4 cut(s) 176, 394, 1954, 1982
Hpy166II GTNNAC 2 cut(s) 116, 1291
Hpy188I TCNGA 8 cut(s) 365, 1045, 1834, 1849, 1876, 2065, 2074, 2080
Hpy8I GTNNAC 2 cut(s) 116, 1291
Hpy99I CGWCG 1 cut(s) 957
HpyAV CCTTC 2 cut(s) 892, 1434
HpyCH4III ACNGT 5 cut(s) 328, 1295, 2018, 2143, 2174
HpyCH4IV ACGT 2 cut(s) 118, 1977
HpyF10VI GCNNNNNNNGC 8 cut(s) 159, 285, 458, 954, 1175, 1347, 1592, 1866
HpyF3I CTNAG 8 cut(s) 69, 146, 1044, 1542, 1575, 1697, 1714, 2121
HpySE526I ACGT 2 cut(s) 118, 1977
Hsp92I GRCGYC 1 cut(s) 118
Hsp92II CATG 6 cut(s) 103, 590, 1313, 1345, 1562, 1864
HspAI GCGC 4 cut(s) 670, 877, 1229, 1381
KflI GGGWCCC 1 cut(s) 185
Kpn2I TCCGGA 1 cut(s) 1357
LguI GCTCTTC 2 cut(s) 267, 1722
LmnI GCTCC 3 cut(s) 1036, 1391, 1485
Lsp1109I GCAGC 4 cut(s) 546, 915, 1238, 1370
LweI GCATC 5 cut(s) 35, 205, 1763, 1807, 1966
MaeI CTAG 8 cut(s) 17, 444, 458, 1104, 1464, 1745, 1919, 1928
MaeII ACGT 2 cut(s) 118, 1977
MaeIII GTNAC 2 cut(s) 328, 1970
MbiI CCGCTC 1 cut(s) 467
MboII GAAGA 8 cut(s) 254, 747, 1202, 1312, 1545, 1577, 1739, 1952
MflI RGATCY 2 cut(s) 1567, 2047
MhlI GDGCHC 5 cut(s) 777, 1033, 1171, 1615, 2185
MlsI TGGCCA 3 cut(s) 380, 791, 2024
MluCI AATT 6 cut(s) 593, 608, 722, 737, 781, 1616
MluNI TGGCCA 3 cut(s) 380, 791, 2024
MlyI GAGTC 3 cut(s) 187, 1559, 1835
MmeI TCCRAC 2 cut(s) 783, 2075
Mox20I TGGCCA 3 cut(s) 380, 791, 2024
MroI TCCGGA 1 cut(s) 1357
MroXI GAANNNNTTC 2 cut(s) 38, 497
MscI TGGCCA 3 cut(s) 380, 791, 2024
Msp20I TGGCCA 3 cut(s) 380, 791, 2024
MspI CCGG 6 cut(s) 126, 508, 1082, 1358, 1483, 1509
Mva1269I GAATGC 3 cut(s) 603, 713, 1662
MvaI CCWGG 8 cut(s) 276, 490, 719, 778, 1175, 1353, 1443, 2084
MvnI CGCG 8 cut(s) 80, 198, 392, 672, 957, 1368, 1411, 1605
MwoI GCNNNNNNNGC 8 cut(s) 159, 285, 458, 954, 1175, 1347, 1592, 1866
NciI CCSGG 2 cut(s) 1483, 1510
NdeI CATATG 1 cut(s) 1902
NheI GCTAGC 1 cut(s) 457
NlaIII CATG 6 cut(s) 103, 590, 1313, 1345, 1562, 1864
NmuCI GTSAC 2 cut(s) 328, 1970
NruI TCGCGA 2 cut(s) 198, 957
PaeR7I CTCGAG 1 cut(s) 2001
PciSI GCTCTTC 2 cut(s) 267, 1722
PcsI WCGNNNNNNNCGW 2 cut(s) 115, 1320
PctI GAATGC 3 cut(s) 603, 713, 1662
PdmI GAANNNNTTC 2 cut(s) 38, 497
PfeI GAWTC 6 cut(s) 913, 986, 1372, 1915, 2075, 2087
PflMI CCANNNNNTGG 1 cut(s) 2020
PfoI TCCNGGA 2 cut(s) 488, 717
Ple19I CGATCG 2 cut(s) 202, 1609
PleI GAGTC 3 cut(s) 186, 1558, 1835
PpsI GAGTC 3 cut(s) 186, 1558, 1835
Ppu21I YACGTR 1 cut(s) 1978
PpuMI RGGWCCY 4 cut(s) 185, 1300, 1808, 2126
Psp124BI GAGCTC 2 cut(s) 1033, 1615
Psp5II RGGWCCY 4 cut(s) 185, 1300, 1808, 2126
Psp6I CCWGG 8 cut(s) 274, 488, 717, 776, 1173, 1351, 1441, 2082
PspEI GGTNACC 1 cut(s) 1970
PspFI CCCAGC 3 cut(s) 632, 687, 1069
PspGI CCWGG 8 cut(s) 274, 488, 717, 776, 1173, 1351, 1441, 2082
PspOMI GGGCCC 1 cut(s) 773
PspPPI RGGWCCY 4 cut(s) 185, 1300, 1808, 2126
PstI CTGCAG 4 cut(s) 933, 1228, 1399, 1726
PstNI CAGNNNCTG 2 cut(s) 1499, 1721
PsuI RGATCY 2 cut(s) 1567, 2047
PvuI CGATCG 2 cut(s) 202, 1609
RruI TCGCGA 2 cut(s) 198, 957
RsaI GTAC 3 cut(s) 1064, 1980, 2098
RsaNI GTAC 3 cut(s) 1063, 1979, 2097
SacI GAGCTC 2 cut(s) 1033, 1615
SapI GCTCTTC 2 cut(s) 267, 1722
SchI GAGTC 3 cut(s) 187, 1559, 1835
SduI GDGCHC 5 cut(s) 777, 1033, 1171, 1615, 2185
SfaNI GCATC 5 cut(s) 35, 205, 1763, 1807, 1966
SfcI CTRYAG 6 cut(s) 219, 929, 1224, 1395, 1722, 1791
Sfr274I CTCGAG 1 cut(s) 2001
SlaI CTCGAG 1 cut(s) 2001
SmlI CTYRAG 2 cut(s) 1376, 2001
SmoI CTYRAG 2 cut(s) 1376, 2001
Sse9I AATT 6 cut(s) 593, 608, 722, 737, 781, 1616
SspMI CTAG 8 cut(s) 17, 444, 458, 1104, 1464, 1745, 1919, 1928
SstI GAGCTC 2 cut(s) 1033, 1615
StyI CCWWGG 4 cut(s) 299, 823, 1463, 2100
TaaI ACNGT 5 cut(s) 328, 1295, 2018, 2143, 2174
TaiI ACGT 2 cut(s) 121, 1980
TaqII GACCGA 1 cut(s) 905
TasI AATT 6 cut(s) 593, 608, 722, 737, 781, 1616
TatI WGTACW 1 cut(s) 1062
TauI GCSGC 6 cut(s) 80, 464, 467, 1014, 1889, 1925
TfiI GAWTC 6 cut(s) 913, 986, 1372, 1915, 2075, 2087
TscAI CASTG 8 cut(s) 73, 799, 1293, 1588, 1687, 1726, 2021, 2125
TseFI GTSAC 2 cut(s) 328, 1970
TseI GCWGC 4 cut(s) 559, 928, 1226, 1383
Tsp45I GTSAC 2 cut(s) 328, 1970
TspDTI ATGAA 5 cut(s) 75, 1172, 1358, 1578, 1869
TspGWI ACGGA 2 cut(s) 941, 1658
TspRI CASTG 8 cut(s) 73, 799, 1293, 1588, 1687, 1726, 2021, 2125
Van91I CCANNNNNTGG 1 cut(s) 2020
XapI RAATTY 3 cut(s) 722, 737, 781
XcmI CCANNNNNNNNNTGG 2 cut(s) 1198, 1293
XhoI CTCGAG 1 cut(s) 2001
XmaJI CCTAGG 1 cut(s) 1463
XmiI GTMKAC 1 cut(s) 115
XmnI GAANNNNTTC 2 cut(s) 38, 497
XspI CTAG 8 cut(s) 17, 444, 458, 1104, 1464, 1745, 1919, 1928
ZraI GACGTC 1 cut(s) 119
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.