Rmu_sc0012742.1_g000008

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0012742.1
OG0000214
Physical Location & Seq
Reverse (-)
33822 .. 36066
2245 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0012742.1_g000008.1.cds

Sequence Viewer

Length: 1857 bp
atgccggacccaaaaatagtcctttctaggcgtttccctcctccccttgatgatggctttctgcccaatggacgagatcatagtgaaagagccctcctggcctttcgtcgcgccatctcctgcttggatattcgtcttaccactgattgcgtaagttacgagctctacgcccctaaccactttgctcgccaatttgggttggcccagttagtaccctggcctctggttgattctgccaattactacacctcttggcggagattagccccacctgggtctgccccctttcagatagcgcctggtccggaggaccacgagattcttgagcacttctccaaacctgcagaacaacccccgcgacctattctaccttctcgctcattgcgtccagggatacaaatccacgagcctagggcaacacaaactacccggagcaggacagcctctgttcaggctgggaaacaaaaggcaatagcagaggagacttctgagggagagtcttcgcatgatgaagatcctgctggggtccgtcaaaggaccactgatccttcttgcctgaacgaggctggaccctcagccactgcaaaagagccaattctcccgctagttcaagcatcaactaaccctgtggcacctctaccatctcccactacagagtatctgcaaggtcctaccattcttataacgatctctgatgacgactcctcggaggatgaaagcgtggaaagccactctgagacttctgccgcttatgaggaactgatgacgacagagattctcgcggtactagagattcaagaggtgaatgaggcagggcctcttcctcttggtgactacgtaccggatattaacccgacagctcgagaggtaagagccactatttggccaatactttccatttcccttttagatccaaccctgctctctgacatttctgaacctgatcatgattctgtttgtatcgaggaggtggcaacaaacactgagggtcctatcggcgggacagtcgccctagagatggaaaatgatactgacggtggggtttccccccaagtctcgcaaataaatgagacaactgtcgaagccgagggccctgtgcttgaatctgctccacatgcctatggtgaaccgcgagttgagtttccagattcccctgcggatgaagggatagaccaacctattgaagacgaagaaactgaagaggctgtccacccttttgcattggtggttcgtgatcctgtggcgcatccgccacctcctcctcctaccagattcgagagattgatgagggtgttgcaggtaactcctccttctgctgtggatgaggctaagatggtgcttcacgaacatctgggtcctcaggtattggagactgacatcctcccgcgagtcttggaagctttaaggtatcttcgccaggagaaggtattgaccctgcagcaatttagtgctattgatgatctgttgaatgaacttgatatggcccgccgacgtcaatcggccgcgaacacccaggctcgggatgctcaagtggcgttgaatagtgtctctcaagaaatggacatctcccgcgatattttaaatgaacgatccatccgcctgcgggaactacaaatccaaaggtccgacttcagacttcaaatcgaggacctcctagcccatctatcctttgttgagaatgcaattgttgcagaagaagctcaactcgatgagcctttggctgcttctgaagaaatgggccgcaacctggcccgtatcagagatcgggccactcaggccgaagctggtgctattgaggcgaaacgccacgtggaggaactttgtttgaaattgagctttgcaggccaatctttgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

618

Amino Acids

68.07

Weight (kDa)

4.55

Isoelectric Point (pI)

61.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000214)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0079611
rosa_multiflora Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha Rh3DG208400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 683
AatII GACGTC 1 cut(s) 1495
Acc36I ACCTGC 2 cut(s) 349, 1288
AccB1I GGYRCC 1 cut(s) 631
AccB7I CCANNNNNTGG 1 cut(s) 882
AccII CGCG 7 cut(s) 111, 358, 782, 1132, 1387, 1505, 1572
AccIII TCCGGA 1 cut(s) 304
AclWI GGATC 5 cut(s) 509, 539, 905, 1229, 1584
AcoI YGGCCR 2 cut(s) 884, 1500
AcuI CTGAAG 3 cut(s) 1218, 1615, 1749
AcvI CACGTG 1 cut(s) 1810
AcyI GRCGYC 1 cut(s) 1492
AfaI GTAC 3 cut(s) 213, 786, 840
AgsI TTSAA 8 cut(s) 611, 797, 1103, 1184, 1468, 1540, 1640, 1828
AjnI CCWGG 8 cut(s) 96, 215, 271, 298, 388, 1416, 1512, 1746
AloI GAACNNNNNNTCC 4 cut(s) 1578, 1599, 1610, 1631
AluBI AGCT 6 cut(s) 163, 860, 1400, 1700, 1784, 1836
AluI AGCT 6 cut(s) 163, 860, 1400, 1700, 1784, 1836
Alw21I GWGCWC 2 cut(s) 165, 330
Alw26I GTCTC 6 cut(s) 476, 731, 1060, 1064, 1364, 1552
AlwI GGATC 5 cut(s) 509, 539, 905, 1229, 1584
AlwNI CAGNNNCTG 2 cut(s) 446, 581
Ama87I CYCGRG 2 cut(s) 861, 1518
Aor13HI TCCGGA 1 cut(s) 304
ApaI GGGCCC 1 cut(s) 1094
ApeKI GCWGC 2 cut(s) 1438, 1721
AspA2I CCTAGG 1 cut(s) 410
AspLEI GCGC 3 cut(s) 113, 298, 1246
AsuC2I CCSGG 1 cut(s) 430
AsuHPI GGTGA 3 cut(s) 814, 842, 1136
AvaI CYCGRG 2 cut(s) 861, 1518
AvrII CCTAGG 1 cut(s) 410
AxyI CCTNAGG 1 cut(s) 1359
BaeGI GKGCMC 1 cut(s) 1094
BalI TGGCCA 1 cut(s) 886
BanI GGYRCC 1 cut(s) 631
BanII GRGCYC 3 cut(s) 94, 165, 1094
BauI CACGAG 2 cut(s) 314, 404
BbrPI CACGTG 1 cut(s) 1810
BbsI GAAGAC 2 cut(s) 492, 1191
Bbv12I GWGCWC 2 cut(s) 165, 330
BbvCI CCTCAGC 1 cut(s) 574
BbvI GCAGC 2 cut(s) 1450, 1708
BccI CCATC 7 cut(s) 47, 122, 649, 1012, 1327, 1601, 1668
BcgI CGANNNNNNTGC 2 cut(s) 1769, 1803
BciT130I CCWGG 8 cut(s) 98, 217, 273, 300, 390, 1418, 1514, 1748
BciVI GTATCC 1 cut(s) 387
BclI TGATCA 1 cut(s) 943
BcnI CCSGG 1 cut(s) 430
BcoDI GTCTC 6 cut(s) 476, 731, 1060, 1064, 1364, 1552
BfaI CTAG 6 cut(s) 27, 411, 605, 788, 1013, 1655
BfmI CTRYAG 3 cut(s) 342, 651, 1436
BfoI RGCGCY 1 cut(s) 299
BfuAI ACCTGC 2 cut(s) 349, 1288
BfuI GTATCC 1 cut(s) 387
BglI GCCNNNNNGGC 2 cut(s) 98, 1775
BisI GCNGC 5 cut(s) 747, 1439, 1503, 1722, 1741
BlnI CCTAGG 1 cut(s) 410
BlsI GCNGC 5 cut(s) 748, 1440, 1504, 1723, 1742
Bme1390I CCNGG 9 cut(s) 98, 217, 273, 300, 390, 430, 1418, 1514, 1748
BmeT110I CYCGRG 2 cut(s) 861, 1518
BmiI GGNNCC 7 cut(s) 9, 527, 571, 633, 990, 1092, 1356
BmrFI CCNGG 9 cut(s) 98, 217, 273, 300, 390, 430, 1418, 1514, 1748
BmrI ACTGGG 1 cut(s) 199
BmsI GCATC 3 cut(s) 623, 1255, 1513
BmuI ACTGGG 1 cut(s) 199
BoxI GACNNNNGTC 1 cut(s) 1076
BpiI GAAGAC 2 cut(s) 492, 1191
BplI GAGNNNNNCTC 2 cut(s) 317, 349
Bpu10I CCTNAGC 1 cut(s) 574
BpuEI CTTGAG 3 cut(s) 344, 1512, 1536
BpuMI CCSGG 1 cut(s) 430
BsaAI YACGTR 2 cut(s) 838, 1810
BsaBI GATNNNNATC 2 cut(s) 398, 513
BsaHI GRCGYC 1 cut(s) 1492
BsaJI CCNNGG 7 cut(s) 215, 272, 389, 410, 705, 1086, 1512
BsaWI WCCGGW 2 cut(s) 304, 841
Bse1I ACTGG 1 cut(s) 205
Bse21I CCTNAGG 1 cut(s) 1359
Bse3DI GCAATG 1 cut(s) 380
Bse8I GATNNNNATC 2 cut(s) 398, 513
BseAI TCCGGA 1 cut(s) 304
BseBI CCWGG 8 cut(s) 98, 217, 273, 300, 390, 1418, 1514, 1748
BseDI CCNNGG 7 cut(s) 215, 272, 389, 410, 705, 1086, 1512
BseGI GGATG 7 cut(s) 718, 1165, 1246, 1327, 1377, 1528, 1593
BseJI GATNNNNATC 2 cut(s) 398, 513
BseMI GCAATG 1 cut(s) 380
BseMII CTCAG 6 cut(s) 480, 588, 726, 975, 1373, 1787
BseNI ACTGG 1 cut(s) 205
BseRI GAGGAG 7 cut(s) 30, 494, 694, 980, 1248, 1251, 1296
BseSI GKGCMC 1 cut(s) 1094
BseX3I CGGCCG 1 cut(s) 1500
BseXI GCAGC 2 cut(s) 1450, 1708
BseYI CCCAGC 2 cut(s) 455, 521
Bsh1236I CGCG 7 cut(s) 111, 358, 782, 1132, 1387, 1505, 1572
Bsh1285I CGRYCG 1 cut(s) 1503
BshNI GGYRCC 1 cut(s) 631
BsiEI CGRYCG 1 cut(s) 1503
BsiHKAI GWGCWC 2 cut(s) 165, 330
BsiHKCI CYCGRG 2 cut(s) 861, 1518
BsiSI CCGG 4 cut(s) 5, 305, 430, 842
BslFI GGGAC 1 cut(s) 1015
BsmAI GTCTC 6 cut(s) 476, 731, 1060, 1064, 1364, 1552
BsmFI GGGAC 1 cut(s) 1015
BsmI GAATGC 1 cut(s) 1684
BsoBI CYCGRG 2 cut(s) 861, 1518
Bsp120I GGGCCC 1 cut(s) 1090
Bsp1286I GDGCHC 4 cut(s) 94, 165, 330, 1094
Bsp13I TCCGGA 1 cut(s) 304
BspCNI CTCAG 6 cut(s) 481, 587, 727, 976, 1372, 1786
BspEI TCCGGA 1 cut(s) 304
BspFNI CGCG 7 cut(s) 111, 358, 782, 1132, 1387, 1505, 1572
BspHI TCATGA 1 cut(s) 946
BspLI GGNNCC 7 cut(s) 9, 527, 571, 633, 990, 1092, 1356
BspMAI CTGCAG 2 cut(s) 346, 1440
BspMI ACCTGC 2 cut(s) 349, 1288
BspPI GGATC 5 cut(s) 509, 539, 905, 1229, 1584
BspT107I GGYRCC 1 cut(s) 631
BsrDI GCAATG 1 cut(s) 380
BsrI ACTGG 1 cut(s) 205
BssECI CCNNGG 7 cut(s) 215, 272, 389, 410, 705, 1086, 1512
BssNI GRCGYC 1 cut(s) 1492
BssSI CACGAG 2 cut(s) 314, 404
BssT1I CCWWGG 1 cut(s) 410
Bst2BI CACGAG 2 cut(s) 314, 404
Bst2UI CCWGG 8 cut(s) 98, 217, 273, 300, 390, 1418, 1514, 1748
Bst4CI ACNGT 3 cut(s) 1006, 1037, 1078
Bst6I CTCTTC 2 cut(s) 825, 1194
BstACI GRCGYC 1 cut(s) 1492
BstAPI GCANNNNNTGC 1 cut(s) 1688
BstBAI YACGTR 2 cut(s) 838, 1810
BstC8I GCNNGC 4 cut(s) 187, 1486, 1601, 1843
BstDEI CTNAG 7 cut(s) 489, 574, 735, 984, 1329, 1359, 1773
BstENI CCTNNNNNAGG 1 cut(s) 560
BstF5I GGATG 7 cut(s) 718, 1165, 1246, 1327, 1377, 1528, 1593
BstFNI CGCG 7 cut(s) 111, 358, 782, 1132, 1387, 1505, 1572
BstH2I RGCGCY 1 cut(s) 299
BstHHI GCGC 3 cut(s) 113, 298, 1246
BstMAI GTCTC 6 cut(s) 476, 731, 1060, 1064, 1364, 1552
BstMCI CGRYCG 1 cut(s) 1503
BstNI CCWGG 8 cut(s) 98, 217, 273, 300, 390, 1418, 1514, 1748
BstNSI RCATGY 1 cut(s) 1118
BstPAI GACNNNNGTC 1 cut(s) 1076
BstSCI CCNGG 9 cut(s) 96, 215, 271, 298, 388, 428, 1416, 1512, 1746
BstSFI CTRYAG 3 cut(s) 342, 651, 1436
BstSLI GKGCMC 1 cut(s) 1094
BstSNI TACGTA 1 cut(s) 838
BstUI CGCG 7 cut(s) 111, 358, 782, 1132, 1387, 1505, 1572
BstV1I GCAGC 2 cut(s) 1450, 1708
BstV2I GAAGAC 2 cut(s) 492, 1191
BstX2I RGATCY 2 cut(s) 514, 910
BstYI RGATCY 2 cut(s) 514, 910
BstZI CGGCCG 1 cut(s) 1500
Bsu36I CCTNAGG 1 cut(s) 1359
BsuI GTATCC 1 cut(s) 387
BtsCI GGATG 7 cut(s) 718, 1165, 1246, 1327, 1377, 1528, 1593
BtsI GCAGTG 1 cut(s) 579
BtsIMutI CAGTG 4 cut(s) 141, 540, 579, 981
BveI ACCTGC 2 cut(s) 349, 1288
Cac8I GCNNGC 4 cut(s) 187, 1486, 1601, 1843
CaiI CAGNNNCTG 2 cut(s) 446, 581
CciI TCATGA 1 cut(s) 946
CfoI GCGC 3 cut(s) 113, 298, 1246
CseI GACGC 1 cut(s) 374
Csp6I GTAC 3 cut(s) 212, 785, 839
CviAII CATG 3 cut(s) 506, 947, 1115
CviQI GTAC 3 cut(s) 212, 785, 839
DdeI CTNAG 7 cut(s) 489, 574, 735, 984, 1329, 1359, 1773
DraI TTTAAA 1 cut(s) 1581
EaeI YGGCCR 2 cut(s) 884, 1500
EagI CGGCCG 1 cut(s) 1500
Eam1104I CTCTTC 2 cut(s) 825, 1194
EarI CTCTTC 2 cut(s) 825, 1194
EciI GGCGGA 3 cut(s) 271, 1239, 1586
Ecl136II GAGCTC 1 cut(s) 163
EclXI CGGCCG 1 cut(s) 1500
Eco105I TACGTA 1 cut(s) 838
Eco130I CCWWGG 1 cut(s) 410
Eco24I GRGCYC 3 cut(s) 94, 165, 1094
Eco52I CGGCCG 1 cut(s) 1500
Eco53kI GAGCTC 1 cut(s) 163
Eco57I CTGAAG 3 cut(s) 1218, 1615, 1749
Eco72I CACGTG 1 cut(s) 1810
Eco81I CCTNAGG 1 cut(s) 1359
Eco88I CYCGRG 2 cut(s) 861, 1518
EcoICRI GAGCTC 1 cut(s) 163
EcoNI CCTNNNNNAGG 1 cut(s) 560
EcoO109I RGGNCCY 7 cut(s) 668, 815, 989, 1090, 1091, 1355, 1648
EcoRII CCWGG 8 cut(s) 96, 215, 271, 298, 388, 1416, 1512, 1746
EcoT14I CCWWGG 1 cut(s) 410
EcoT38I GRGCYC 3 cut(s) 94, 165, 1094
ErhI CCWWGG 1 cut(s) 410
FaeI CATG 3 cut(s) 509, 950, 1118
FaiI YATR 8 cut(s) 81, 507, 683, 753, 948, 1116, 1122, 1481
FaqI GGGAC 1 cut(s) 1015
FatI CATG 3 cut(s) 505, 946, 1114
FauI CCCGC 7 cut(s) 363, 609, 992, 1392, 1493, 1577, 1596
FbaI TGATCA 1 cut(s) 943
Fnu4HI GCNGC 5 cut(s) 747, 1439, 1503, 1722, 1741
FokI GGATG 7 cut(s) 725, 1172, 1233, 1334, 1364, 1535, 1580
FriOI GRGCYC 3 cut(s) 94, 165, 1094
Fsp4HI GCNGC 5 cut(s) 747, 1439, 1503, 1722, 1741
FspBI CTAG 6 cut(s) 27, 411, 605, 788, 1013, 1655
GlaI GCGC 3 cut(s) 112, 297, 1245
GluI GCNGC 5 cut(s) 747, 1439, 1503, 1722, 1741
GsaI CCCAGC 2 cut(s) 459, 525
HaeII RGCGCY 1 cut(s) 299
HapII CCGG 4 cut(s) 5, 305, 430, 842
HgaI GACGC 1 cut(s) 374
HhaI GCGC 3 cut(s) 113, 298, 1246
Hin1I GRCGYC 1 cut(s) 1492
Hin1II CATG 3 cut(s) 509, 950, 1118
Hin6I GCGC 3 cut(s) 111, 296, 1244
HinP1I GCGC 3 cut(s) 111, 296, 1244
HindIII AAGCTT 1 cut(s) 1398
HpaII CCGG 4 cut(s) 5, 305, 430, 842
HphI GGTGA 3 cut(s) 814, 842, 1136
Hpy166II GTNNAC 2 cut(s) 1127, 1210
Hpy8I GTNNAC 2 cut(s) 1127, 1210
Hpy99I CGWCG 2 cut(s) 111, 1494
HpyAV CCTTC 5 cut(s) 381, 558, 1157, 1320, 1417
HpyCH4III ACNGT 3 cut(s) 1006, 1037, 1078
HpyCH4IV ACGT 3 cut(s) 837, 1492, 1809
HpyCH4V TGCA 9 cut(s) 344, 584, 664, 1220, 1297, 1438, 1682, 1691, 1841
HpyF3I CTNAG 7 cut(s) 489, 574, 735, 984, 1329, 1359, 1773
HpySE526I ACGT 3 cut(s) 837, 1492, 1809
Hsp92I GRCGYC 1 cut(s) 1492
Hsp92II CATG 3 cut(s) 509, 950, 1118
HspAI GCGC 3 cut(s) 111, 296, 1244
Kpn2I TCCGGA 1 cut(s) 304
Ksp22I TGATCA 1 cut(s) 943
LmnI GCTCC 2 cut(s) 432, 1114
Lsp1109I GCAGC 2 cut(s) 1450, 1708
LweI GCATC 3 cut(s) 623, 1255, 1513
MaeI CTAG 6 cut(s) 27, 411, 605, 788, 1013, 1655
MaeII ACGT 3 cut(s) 837, 1492, 1809
MaeIII GTNAC 3 cut(s) 155, 830, 1300
MboII GAAGA 9 cut(s) 492, 524, 812, 1196, 1202, 1211, 1403, 1706, 1742
MfeI CAATTG 1 cut(s) 1683
MflI RGATCY 2 cut(s) 514, 910
MhlI GDGCHC 4 cut(s) 94, 165, 330, 1094
MlsI TGGCCA 1 cut(s) 886
MluCI AATT 6 cut(s) 191, 238, 594, 1442, 1683, 1829
MluNI TGGCCA 1 cut(s) 886
MlyI GAGTC 3 cut(s) 506, 695, 1398
MmeI TCCRAC 2 cut(s) 938, 1650
Mox20I TGGCCA 1 cut(s) 886
MroI TCCGGA 1 cut(s) 304
MscI TGGCCA 1 cut(s) 886
MseI TTAA 3 cut(s) 849, 1403, 1580
MslI CAYNNNNRTG 1 cut(s) 1119
Msp20I TGGCCA 1 cut(s) 886
MspI CCGG 4 cut(s) 5, 305, 430, 842
MspR9I CCNGG 9 cut(s) 98, 217, 273, 300, 390, 430, 1418, 1514, 1748
MunI CAATTG 1 cut(s) 1683
Mva1269I GAATGC 1 cut(s) 1684
MvaI CCWGG 8 cut(s) 98, 217, 273, 300, 390, 1418, 1514, 1748
MvnI CGCG 7 cut(s) 111, 358, 782, 1132, 1387, 1505, 1572
NciI CCSGG 1 cut(s) 430
NlaIII CATG 3 cut(s) 509, 950, 1118
NlaIV GGNNCC 7 cut(s) 9, 527, 571, 633, 990, 1092, 1356
NmeAIII GCCGAG 1 cut(s) 1111
NmuCI GTSAC 1 cut(s) 830
NspI RCATGY 1 cut(s) 1118
PaeR7I CTCGAG 1 cut(s) 861
PagI TCATGA 1 cut(s) 946
PcsI WCGNNNNNNNCGW 1 cut(s) 382
PctI GAATGC 1 cut(s) 1684
PfeI GAWTC 8 cut(s) 230, 319, 775, 793, 950, 1103, 1148, 1272
PflMI CCANNNNNTGG 1 cut(s) 882
PkrI GCNGC 5 cut(s) 748, 1440, 1504, 1723, 1742
PleI GAGTC 3 cut(s) 505, 695, 1397
PmaCI CACGTG 1 cut(s) 1810
PmlI CACGTG 1 cut(s) 1810
PpsI GAGTC 3 cut(s) 505, 695, 1397
Ppu21I YACGTR 2 cut(s) 838, 1810
PpuMI RGGWCCY 4 cut(s) 668, 989, 1355, 1648
PshAI GACNNNNGTC 1 cut(s) 1076
PsiI TTATAA 1 cut(s) 683
Psp124BI GAGCTC 1 cut(s) 165
Psp5II RGGWCCY 4 cut(s) 668, 989, 1355, 1648
Psp6I CCWGG 8 cut(s) 96, 215, 271, 298, 388, 1416, 1512, 1746
PspCI CACGTG 1 cut(s) 1810
PspFI CCCAGC 2 cut(s) 455, 521
PspGI CCWGG 8 cut(s) 96, 215, 271, 298, 388, 1416, 1512, 1746
PspN4I GGNNCC 7 cut(s) 9, 527, 571, 633, 990, 1092, 1356
PspOMI GGGCCC 1 cut(s) 1090
PspPPI RGGWCCY 4 cut(s) 668, 989, 1355, 1648
PstI CTGCAG 2 cut(s) 346, 1440
PstNI CAGNNNCTG 2 cut(s) 446, 581
PsuI RGATCY 2 cut(s) 514, 910
RsaI GTAC 3 cut(s) 213, 786, 840
RsaNI GTAC 3 cut(s) 212, 785, 839
RseI CAYNNNNRTG 1 cut(s) 1119
SacI GAGCTC 1 cut(s) 165
SaqAI TTAA 3 cut(s) 849, 1403, 1580
SatI GCNGC 5 cut(s) 747, 1439, 1503, 1722, 1741
SchI GAGTC 3 cut(s) 506, 695, 1398
ScrFI CCNGG 9 cut(s) 98, 217, 273, 300, 390, 430, 1418, 1514, 1748
SduI GDGCHC 4 cut(s) 94, 165, 330, 1094
SfaNI GCATC 3 cut(s) 623, 1255, 1513
SfcI CTRYAG 3 cut(s) 342, 651, 1436
SfiI GGCCNNNNNGGCC 1 cut(s) 1775
Sfr274I CTCGAG 1 cut(s) 861
SlaI CTCGAG 1 cut(s) 861
SmiMI CAYNNNNRTG 1 cut(s) 1119
SmlI CTYRAG 4 cut(s) 323, 861, 1527, 1551
SmoI CTYRAG 4 cut(s) 323, 861, 1527, 1551
SnaBI TACGTA 1 cut(s) 838
Sse9I AATT 6 cut(s) 191, 238, 594, 1442, 1683, 1829
SspMI CTAG 6 cut(s) 27, 411, 605, 788, 1013, 1655
SstI GAGCTC 1 cut(s) 165
StyD4I CCNGG 9 cut(s) 96, 215, 271, 298, 388, 428, 1416, 1512, 1746
StyI CCWWGG 1 cut(s) 410
TaaI ACNGT 3 cut(s) 1006, 1037, 1078
TaiI ACGT 3 cut(s) 840, 1495, 1812
TaqI TCGA 6 cut(s) 862, 963, 1080, 1275, 1644, 1707
TasI AATT 6 cut(s) 191, 238, 594, 1442, 1683, 1829
TauI GCSGC 3 cut(s) 749, 1505, 1743
TfiI GAWTC 8 cut(s) 230, 319, 775, 793, 950, 1103, 1148, 1272
Tru1I TTAA 3 cut(s) 849, 1403, 1580
Tru9I TTAA 3 cut(s) 849, 1403, 1580
TscAI CASTG 4 cut(s) 148, 547, 586, 988
TseFI GTSAC 1 cut(s) 830
TseI GCWGC 2 cut(s) 1438, 1721
Tsp45I GTSAC 1 cut(s) 830
TspDTI ATGAA 5 cut(s) 525, 729, 1176, 1485, 1599
TspGWI ACGGA 1 cut(s) 518
TspRI CASTG 4 cut(s) 148, 547, 586, 988
Van91I CCANNNNNTGG 1 cut(s) 882
XagI CCTNNNNNAGG 1 cut(s) 560
XceI RCATGY 1 cut(s) 1118
XcmI CCANNNNNNNNNTGG 1 cut(s) 121
XhoI CTCGAG 1 cut(s) 861
XmaJI CCTAGG 1 cut(s) 410
XspI CTAG 6 cut(s) 27, 411, 605, 788, 1013, 1655
ZraI GACGTC 1 cut(s) 1493
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.