Rroxscaffold_1G00020710

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000214
Physical Location & Seq
Forward (+)
25213320 .. 25214783
1464 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00020710.1

Sequence Viewer

Length: 744 bp
ATGGCTCCGCCAAAGAAAATCATCATCGATCAAGAGGAGGAAATCATCGAGGAGGCCACCCATGCCCGGGGAATCGGCATTGGCGCCGCAGACCCTTGCTACTCGGTTTCCCAATTCTTGGGTGGCGGGGGCGGGTCCTACTCGCAAGAATCTATTCCGAAGATATGCCATTTCCCTTTATGGCCTCGCCCATCCACAGCCTCATTCCGGTTCTCGGAGGACTCCCGGAGATTTCGTAGCCGGGGTGCGTGTCAATACAAAGCCAAAATAGGGTTTTGGACCACGATTAGTGTAGAGGAACTCACCGGTGTCGCAAAGTTCGAGCAAGGGATGCGGACCGCCGGGACGCAGTGGGCATCGATCACACCATTGATTTGGATCTGCGCACGCTTGGCTTTTCGCCGCACCATCTTTTGCTCGGATATCGGACTCGCGGCCGATGACATCGCTTATGAGCTTTACGCCCCCAATCACTTTGCTCGCCAACTCGGGTTAGCCCGGTTAGTGCCTTTCCTCTTTACGATTCATGGAACTACAACACCTCCTAGAGCGAGAATTGGCCCAAGAATCGGGCCTCTTCTAGCCCAAAACAAGCTTTCCTTGATCAATCTTCCGAACGGGCCGTTGAACTTATCCCGTCGACGGAGTCGCCGAGGACTACGACCACTAGTGGTCCTAGGTCTCTCGTTAACCGCCGGAATCAACGAGATGACAAGCTCTTCGCTATACTCTTCCGTGATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

247

Amino Acids

27.16

Weight (kDa)

9.86

Isoelectric Point (pI)

52.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000214)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0079611
rosa_multiflora Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha Rh3DG208400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 385
AccB1I GGYRCC 1 cut(s) 83
AccB7I CCANNNNNTGG 1 cut(s) 118
AccI GTMKAC 1 cut(s) 640
AccII CGCG 1 cut(s) 434
AciI CCGC 9 cut(s) 8, 87, 126, 132, 334, 339, 403, 434, 693
AclWI GGATC 1 cut(s) 386
AcoI YGGCCR 1 cut(s) 435
AcyI GRCGYC 1 cut(s) 84
AfiI CCNNNNNNNGG 8 cut(s) 66, 67, 118, 207, 214, 270, 569, 642
AgeI ACCGGT 1 cut(s) 305
AgsI TTSAA 1 cut(s) 628
AhlI ACTAGT 1 cut(s) 667
AluBI AGCT 3 cut(s) 457, 595, 717
AluI AGCT 3 cut(s) 457, 595, 717
Alw26I GTCTC 1 cut(s) 686
AlwI GGATC 1 cut(s) 386
Ama87I CYCGRG 2 cut(s) 66, 488
AoxI GGCC 6 cut(s) 54, 182, 435, 559, 572, 620
ArsI GACNNNNNNTTYG 2 cut(s) 703, 735
AsiGI ACCGGT 1 cut(s) 305
Asp700I GAANNNNTTC 1 cut(s) 153
AspA2I CCTAGG 1 cut(s) 676
AspLEI GCGC 2 cut(s) 86, 386
AspS9I GGNCC 7 cut(s) 135, 279, 336, 560, 572, 620, 673
AsuC2I CCSGG 6 cut(s) 67, 68, 226, 242, 343, 499
AsuHPI GGTGA 1 cut(s) 295
AvaI CYCGRG 2 cut(s) 66, 488
AvaII GGWCC 4 cut(s) 135, 279, 336, 673
AvrII CCTAGG 1 cut(s) 676
BanI GGYRCC 1 cut(s) 83
BccI CCATC 2 cut(s) 199, 416
BceAI ACGGC 1 cut(s) 607
BclI TGATCA 1 cut(s) 603
BcnI CCSGG 6 cut(s) 67, 68, 226, 242, 343, 499
BcoDI GTCTC 1 cut(s) 686
BcuI ACTAGT 1 cut(s) 667
BfaI CTAG 4 cut(s) 546, 581, 668, 677
BfoI RGCGCY 1 cut(s) 87
BisI GCNGC 3 cut(s) 87, 403, 435
BlnI CCTAGG 1 cut(s) 676
BlsI GCNGC 3 cut(s) 88, 404, 436
Bme1390I CCNGG 6 cut(s) 67, 68, 226, 242, 343, 499
Bme18I GGWCC 4 cut(s) 135, 279, 336, 673
BmeT110I CYCGRG 2 cut(s) 66, 488
BmgT120I GGNCC 7 cut(s) 135, 279, 336, 560, 572, 620, 673
BmiI GGNNCC 3 cut(s) 6, 85, 136
BmrFI CCNGG 6 cut(s) 67, 68, 226, 242, 343, 499
BmsI GCATC 2 cut(s) 321, 365
BpuMI CCSGG 6 cut(s) 67, 68, 226, 242, 343, 499
Bsa29I ATCGAT 2 cut(s) 27, 359
BsaBI GATNNNNATC 1 cut(s) 377
BsaHI GRCGYC 1 cut(s) 84
BsaI GGTCTC 1 cut(s) 686
BsaJI CCNNGG 5 cut(s) 66, 67, 241, 652, 676
BsaWI WCCGGW 2 cut(s) 207, 305
BsaXI ACNNNNNCTCC 4 cut(s) 220, 250, 526, 556
Bsc4I CCNNNNNNNGG 8 cut(s) 66, 67, 118, 207, 214, 270, 569, 642
Bse118I RCCGGY 1 cut(s) 305
Bse8I GATNNNNATC 1 cut(s) 377
BseCI ATCGAT 2 cut(s) 27, 359
BseDI CCNNGG 5 cut(s) 66, 67, 241, 652, 676
BseGI GGATG 2 cut(s) 191, 336
BseJI GATNNNNATC 1 cut(s) 377
BseLI CCNNNNNNNGG 8 cut(s) 66, 67, 118, 207, 214, 270, 569, 642
BseRI GAGGAG 2 cut(s) 50, 65
BseX3I CGGCCG 1 cut(s) 435
Bsh1236I CGCG 1 cut(s) 434
Bsh1285I CGRYCG 1 cut(s) 438
BshFI GGCC 6 cut(s) 56, 184, 437, 561, 574, 622
BshNI GGYRCC 1 cut(s) 83
BshTI ACCGGT 1 cut(s) 305
BshVI ATCGAT 2 cut(s) 27, 359
BsiEI CGRYCG 1 cut(s) 438
BsiHKCI CYCGRG 2 cut(s) 66, 488
BsiSI CCGG 8 cut(s) 67, 208, 226, 241, 306, 342, 499, 696
BslFI GGGAC 1 cut(s) 358
BslI CCNNNNNNNGG 8 cut(s) 66, 67, 118, 207, 214, 270, 569, 642
BsmAI GTCTC 1 cut(s) 686
BsmFI GGGAC 1 cut(s) 358
BsnI GGCC 6 cut(s) 56, 184, 437, 561, 574, 622
Bso31I GGTCTC 1 cut(s) 686
BsoBI CYCGRG 2 cut(s) 66, 488
Bsp143I GATC 4 cut(s) 28, 360, 378, 603
BspACI CCGC 9 cut(s) 8, 87, 126, 132, 334, 339, 403, 434, 693
BspANI GGCC 6 cut(s) 56, 184, 437, 561, 574, 622
BspDI ATCGAT 2 cut(s) 27, 359
BspFNI CGCG 1 cut(s) 434
BspLI GGNNCC 3 cut(s) 6, 85, 136
BspPI GGATC 1 cut(s) 386
BspQI GCTCTTC 1 cut(s) 724
BspT107I GGYRCC 1 cut(s) 83
BspTNI GGTCTC 1 cut(s) 686
BsrFI RCCGGY 1 cut(s) 305
BssAI RCCGGY 1 cut(s) 305
BssECI CCNNGG 5 cut(s) 66, 67, 241, 652, 676
BssMI GATC 4 cut(s) 28, 360, 378, 603
BssNI GRCGYC 1 cut(s) 84
BssT1I CCWWGG 1 cut(s) 676
Bst6I CTCTTC 3 cut(s) 582, 724, 736
BstACI GRCGYC 1 cut(s) 84
BstAPI GCANNNNNTGC 1 cut(s) 331
BstC8I GCNNGC 2 cut(s) 388, 481
BstF5I GGATG 2 cut(s) 191, 336
BstFNI CGCG 1 cut(s) 434
BstH2I RGCGCY 1 cut(s) 87
BstHHI GCGC 2 cut(s) 86, 386
BstKTI GATC 4 cut(s) 31, 363, 381, 606
BstMAI GTCTC 1 cut(s) 686
BstMBI GATC 4 cut(s) 28, 360, 378, 603
BstMCI CGRYCG 1 cut(s) 438
BstMWI GCNNNNNNNGC 3 cut(s) 62, 331, 392
BstSCI CCNGG 6 cut(s) 65, 66, 224, 240, 341, 497
BstUI CGCG 1 cut(s) 434
BstX2I RGATCY 1 cut(s) 378
BstXI CCANNNNNNTGG 1 cut(s) 375
BstYI RGATCY 1 cut(s) 378
BstZI CGGCCG 1 cut(s) 435
Bsu15I ATCGAT 2 cut(s) 27, 359
BsuRI GGCC 6 cut(s) 56, 184, 437, 561, 574, 622
BsuTUI ATCGAT 2 cut(s) 27, 359
BtgZI GCGATG 1 cut(s) 430
BtsCI GGATG 2 cut(s) 191, 336
BtsI GCAGTG 1 cut(s) 356
BtsIMutI CAGTG 1 cut(s) 356
Cac8I GCNNGC 2 cut(s) 388, 481
CfoI GCGC 2 cut(s) 86, 386
Cfr10I RCCGGY 1 cut(s) 305
Cfr13I GGNCC 7 cut(s) 135, 279, 336, 560, 572, 620, 673
Cfr9I CCCGGG 1 cut(s) 66
ClaI ATCGAT 2 cut(s) 27, 359
CpoI CGGWCCG 1 cut(s) 336
CseI GACGC 1 cut(s) 355
CspAI ACCGGT 1 cut(s) 305
CspI CGGWCCG 1 cut(s) 336
CviAII CATG 2 cut(s) 62, 527
DinI GGCGCC 1 cut(s) 85
DpnI GATC 4 cut(s) 30, 362, 380, 605
DpnII GATC 4 cut(s) 28, 360, 378, 603
EaeI YGGCCR 1 cut(s) 435
EagI CGGCCG 1 cut(s) 435
Eam1104I CTCTTC 3 cut(s) 582, 724, 736
EarI CTCTTC 3 cut(s) 582, 724, 736
EclXI CGGCCG 1 cut(s) 435
Eco130I CCWWGG 1 cut(s) 676
Eco31I GGTCTC 1 cut(s) 686
Eco32I GATATC 1 cut(s) 424
Eco47I GGWCC 4 cut(s) 135, 279, 336, 673
Eco52I CGGCCG 1 cut(s) 435
Eco88I CYCGRG 2 cut(s) 66, 488
EcoO109I RGGNCCY 1 cut(s) 135
EcoRV GATATC 1 cut(s) 424
EcoT14I CCWWGG 1 cut(s) 676
EgeI GGCGCC 1 cut(s) 85
EheI GGCGCC 1 cut(s) 85
ErhI CCWWGG 1 cut(s) 676
FaeI CATG 2 cut(s) 65, 530
FaiI YATR 6 cut(s) 63, 166, 181, 453, 528, 727
FalI AAGNNNNNCTT 2 cut(s) 584, 616
FaqI GGGAC 1 cut(s) 358
FatI CATG 2 cut(s) 61, 526
FauI CCCGC 2 cut(s) 119, 125
FbaI TGATCA 1 cut(s) 603
FblI GTMKAC 1 cut(s) 640
Fnu4HI GCNGC 3 cut(s) 87, 403, 435
FokI GGATG 2 cut(s) 178, 343
Fsp4HI GCNGC 3 cut(s) 87, 403, 435
FspBI CTAG 4 cut(s) 546, 581, 668, 677
FspI TGCGCA 1 cut(s) 385
GlaI GCGC 2 cut(s) 85, 385
GluI GCNGC 3 cut(s) 87, 403, 435
HaeII RGCGCY 1 cut(s) 87
HaeIII GGCC 6 cut(s) 56, 184, 437, 561, 574, 622
HapII CCGG 8 cut(s) 67, 208, 226, 241, 306, 342, 499, 696
HgaI GACGC 1 cut(s) 355
HhaI GCGC 2 cut(s) 86, 386
Hin1I GRCGYC 1 cut(s) 84
Hin1II CATG 2 cut(s) 65, 530
Hin6I GCGC 2 cut(s) 84, 384
HinP1I GCGC 2 cut(s) 84, 384
HincII GTYRAC 2 cut(s) 641, 690
HindII GTYRAC 2 cut(s) 641, 690
HindIII AAGCTT 1 cut(s) 593
HinfI GANTC 8 cut(s) 72, 149, 221, 429, 523, 567, 646, 699
HpaI GTTAAC 1 cut(s) 690
HpaII CCGG 8 cut(s) 67, 208, 226, 241, 306, 342, 499, 696
HphI GGTGA 1 cut(s) 295
Hpy166II GTNNAC 2 cut(s) 641, 690
Hpy188I TCNGA 5 cut(s) 159, 217, 421, 428, 615
Hpy188III TCNNGA 1 cut(s) 32
Hpy8I GTNNAC 2 cut(s) 641, 690
Hpy99I CGWCG 2 cut(s) 642, 645
HpyF10VI GCNNNNNNNGC 3 cut(s) 62, 331, 392
Hsp92I GRCGYC 1 cut(s) 84
Hsp92II CATG 2 cut(s) 65, 530
HspAI GCGC 2 cut(s) 84, 384
KasI GGCGCC 1 cut(s) 83
Ksp22I TGATCA 1 cut(s) 603
KspAI GTTAAC 1 cut(s) 690
Kzo9I GATC 4 cut(s) 28, 360, 378, 603
LguI GCTCTTC 1 cut(s) 724
LmnI GCTCC 1 cut(s) 10
LpnPI CCDG 8 cut(s) 80, 221, 239, 254, 319, 355, 512, 709
LweI GCATC 2 cut(s) 321, 365
MaeI CTAG 4 cut(s) 546, 581, 668, 677
MalI GATC 4 cut(s) 30, 362, 380, 605
MboI GATC 4 cut(s) 28, 360, 378, 603
MboII GAAGA 5 cut(s) 172, 569, 602, 711, 723
MflI RGATCY 1 cut(s) 378
MluCI AATT 2 cut(s) 113, 555
Mly113I GGCGCC 1 cut(s) 84
MlyI GAGTC 3 cut(s) 215, 423, 655
MroXI GAANNNNTTC 1 cut(s) 153
MseI TTAA 1 cut(s) 689
MspI CCGG 8 cut(s) 67, 208, 226, 241, 306, 342, 499, 696
MspR9I CCNGG 6 cut(s) 67, 68, 226, 242, 343, 499
MvnI CGCG 1 cut(s) 434
MwoI GCNNNNNNNGC 3 cut(s) 62, 331, 392
NarI GGCGCC 1 cut(s) 84
NciI CCSGG 6 cut(s) 67, 68, 226, 242, 343, 499
NdeII GATC 4 cut(s) 28, 360, 378, 603
NlaIII CATG 2 cut(s) 65, 530
NlaIV GGNNCC 3 cut(s) 6, 85, 136
NmeAIII GCCGAG 1 cut(s) 677
NsbI TGCGCA 1 cut(s) 385
PciSI GCTCTTC 1 cut(s) 724
PcsI WCGNNNNNNNCGW 2 cut(s) 318, 649
PdmI GAANNNNTTC 1 cut(s) 153
PfeI GAWTC 5 cut(s) 72, 149, 523, 567, 699
PflFI GACNNNGTC 1 cut(s) 645
PflMI CCANNNNNTGG 1 cut(s) 118
PfoI TCCNGGA 1 cut(s) 224
PinAI ACCGGT 1 cut(s) 305
PkrI GCNGC 3 cut(s) 88, 404, 436
PleI GAGTC 3 cut(s) 215, 423, 654
PluTI GGCGCC 1 cut(s) 87
PpsI GAGTC 3 cut(s) 215, 423, 654
PpuMI RGGWCCY 1 cut(s) 135
Psp5II RGGWCCY 1 cut(s) 135
PspN4I GGNNCC 3 cut(s) 6, 85, 136
PspPI GGNCC 7 cut(s) 135, 279, 336, 560, 572, 620, 673
PspPPI RGGWCCY 1 cut(s) 135
PsuI RGATCY 1 cut(s) 378
PsyI GACNNNGTC 1 cut(s) 645
Rsr2I CGGWCCG 1 cut(s) 336
RsrII CGGWCCG 1 cut(s) 336
SalI GTCGAC 1 cut(s) 639
SapI GCTCTTC 1 cut(s) 724
SaqAI TTAA 1 cut(s) 689
SatI GCNGC 3 cut(s) 87, 403, 435
Sau3AI GATC 4 cut(s) 28, 360, 378, 603
Sau96I GGNCC 7 cut(s) 135, 279, 336, 560, 572, 620, 673
SchI GAGTC 3 cut(s) 215, 423, 655
ScrFI CCNGG 6 cut(s) 67, 68, 226, 242, 343, 499
SetI ASST 5 cut(s) 459, 544, 597, 682, 719
SfaNI GCATC 2 cut(s) 321, 365
SfoI GGCGCC 1 cut(s) 85
SgrAI CRCCGGYG 1 cut(s) 305
SgrDI CGTCGACG 1 cut(s) 639
SinI GGWCC 4 cut(s) 135, 279, 336, 673
SmaI CCCGGG 1 cut(s) 68
SpeI ACTAGT 1 cut(s) 667
Sse9I AATT 2 cut(s) 113, 555
SsiI CCGC 9 cut(s) 8, 87, 126, 132, 334, 339, 403, 434, 693
SspDI GGCGCC 1 cut(s) 83
SspMI CTAG 4 cut(s) 546, 581, 668, 677
StyD4I CCNGG 6 cut(s) 65, 66, 224, 240, 341, 497
StyI CCWWGG 1 cut(s) 676
TaqI TCGA 5 cut(s) 27, 48, 321, 359, 640
TasI AATT 2 cut(s) 113, 555
TauI GCSGC 3 cut(s) 89, 405, 437
TfiI GAWTC 5 cut(s) 72, 149, 523, 567, 699
Tru1I TTAA 1 cut(s) 689
Tru9I TTAA 1 cut(s) 689
TscAI CASTG 1 cut(s) 356
TspDTI ATGAA 1 cut(s) 515
TspGWI ACGGA 2 cut(s) 658, 724
TspMI CCCGGG 1 cut(s) 66
TspRI CASTG 1 cut(s) 356
Tth111I GACNNNGTC 1 cut(s) 645
Van91I CCANNNNNTGG 1 cut(s) 118
VpaK11BI GGWCC 4 cut(s) 135, 279, 336, 673
XcmI CCANNNNNNNNNTGG 1 cut(s) 119
XmaI CCCGGG 1 cut(s) 66
XmaJI CCTAGG 1 cut(s) 676
XmiI GTMKAC 1 cut(s) 640
XmnI GAANNNNTTC 1 cut(s) 153
XspI CTAG 4 cut(s) 546, 581, 668, 677
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.