Rroxscaffold_4G00329970

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000214
Physical Location & Seq
Forward (+)
63312947 .. 63314530
1584 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00329970.1

Sequence Viewer

Length: 864 bp
ATGGCTTTCTACCCGGTGGATAGGATCATAGCGAAAGAGCCCTCCCGGCATTTCGTCGCGCCATCTCCTCGCTTAGATATTCGTCTTGCCACCGATTGCTCCCACCCGGGTCCGCCCCCTTTCGCAGTCGAGTTTACTTTGATAGTGATTCCCCCTTGGGTCGGAGCGCTGTACTCCCTCAACGATGTCGACGATGATTATGCCGATTGGTGGAACGAAGTGTCCGTGAACTGTTGGGACCTGCCACATGACAAACTCTTCATCCCGATCTTTAGTGGCATGAGTAGTCCCGGTCCGGAGGACTGCGAGATTCTTGAGCGCTTCTCCAACCCCGCAGCACAACCCCGGCGACTTATTCCACCTTCTCGCTCATCGCATCCAGGGATACAAATCCACGAGCTTAGGGCAACACAAACTACCCGGAGCAAGACAACCTCGTTCGGCCGGAAACAAAGGGCAATAGTAGAGCGAGACTCTGATGGAGAGTCTTCTCATGATGAAGATCCCGCCGAGCGTGGAAAGCCACTCCGAGGCTTCGCCGCTTATGAGGAACCGATGACGACAGAGATTCTCGCGGCACTAGAAGTCCAAGAGGTGAATGAGGTAAGGCCTCTTCCTCTTGGTGACCATGTACCGGATATTGACCCGACGGCTCGAGAGGAGGTGGCTACAAATGCCGAGGGTCCTATCGGCGGGACAGTCGCTCCAAAGATGGAAAATGATACCGACGGTGGTGGTTCCACCCAAGTCTCGAGAATAAATCGGACAACCGTCGAAGCCGAGGGGCTCGTGCTTGAATCTGCTCCACTTGCCCATGGTGAGCCTCGAGTTGAGTTTCCGATTCTCTCCGGGCCGAAGGGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

287

Amino Acids

31.47

Weight (kDa)

4.78

Isoelectric Point (pI)

48.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000214)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0079611
rosa_multiflora Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha Rh3DG208400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 249
AccI GTMKAC 1 cut(s) 189
AccII CGCG 2 cut(s) 59, 575
AccIII TCCGGA 1 cut(s) 295
AciI CCGC 6 cut(s) 113, 333, 507, 540, 575, 693
AclWI GGATC 2 cut(s) 32, 497
AcoI YGGCCR 1 cut(s) 442
AfaI GTAC 2 cut(s) 173, 633
AfeI AGCGCT 2 cut(s) 168, 320
AfiI CCNNNNNNNGG 5 cut(s) 161, 210, 530, 634, 692
AgsI TTSAA 1 cut(s) 797
AjnI CCWGG 1 cut(s) 379
AloI GAACNNNNNNTCC 2 cut(s) 206, 238
AluBI AGCT 1 cut(s) 400
AluI AGCT 1 cut(s) 400
Alw26I GTCTC 2 cut(s) 465, 754
AlwI GGATC 2 cut(s) 32, 497
Ama87I CYCGRG 4 cut(s) 106, 654, 751, 825
Aor13HI TCCGGA 1 cut(s) 295
Aor51HI AGCGCT 2 cut(s) 168, 320
AoxI GGCC 3 cut(s) 442, 608, 851
ApeKI GCWGC 1 cut(s) 335
AspLEI GCGC 3 cut(s) 61, 169, 321
AspS9I GGNCC 5 cut(s) 110, 238, 293, 683, 851
AsuC2I CCSGG 8 cut(s) 14, 46, 107, 108, 291, 346, 421, 850
AsuHPI GGTGA 3 cut(s) 607, 635, 830
AvaI CYCGRG 4 cut(s) 106, 654, 751, 825
AvaII GGWCC 4 cut(s) 110, 238, 293, 683
BanII GRGCYC 2 cut(s) 42, 789
BarI GAAGNNNNNNTAC 2 cut(s) 597, 629
BauI CACGAG 2 cut(s) 395, 788
BbsI GAAGAC 1 cut(s) 480
BbvI GCAGC 1 cut(s) 347
BccI CCATC 3 cut(s) 70, 473, 706
BceAI ACGGC 1 cut(s) 666
BcgI CGANNNNNNTGC 2 cut(s) 182, 216
BciT130I CCWGG 1 cut(s) 381
BciVI GTATCC 1 cut(s) 378
BcnI CCSGG 8 cut(s) 14, 46, 107, 108, 291, 346, 421, 850
BcoDI GTCTC 2 cut(s) 465, 754
BfaI CTAG 1 cut(s) 581
BfoI RGCGCY 2 cut(s) 170, 322
BfuAI ACCTGC 1 cut(s) 249
BfuI GTATCC 1 cut(s) 378
BglI GCCNNNNNGGC 1 cut(s) 46
BisI GCNGC 3 cut(s) 336, 540, 576
BlsI GCNGC 3 cut(s) 337, 541, 577
Bme1390I CCNGG 9 cut(s) 14, 46, 107, 108, 291, 346, 381, 421, 850
Bme18I GGWCC 4 cut(s) 110, 238, 293, 683
BmeT110I CYCGRG 4 cut(s) 106, 654, 751, 825
BmgT120I GGNCC 5 cut(s) 110, 238, 293, 683, 851
BmiI GGNNCC 5 cut(s) 111, 239, 552, 684, 739
BmrFI CCNGG 9 cut(s) 14, 46, 107, 108, 291, 346, 381, 421, 850
BmsI GCATC 1 cut(s) 385
BoxI GACNNNNGTC 1 cut(s) 770
BpiI GAAGAC 1 cut(s) 480
BplI GAGNNNNNCTC 4 cut(s) 308, 340, 458, 490
Bpu10I CCTNAGC 1 cut(s) 401
BpuEI CTTGAG 1 cut(s) 335
BpuMI CCSGG 8 cut(s) 14, 46, 107, 108, 291, 346, 421, 850
BsaBI GATNNNNATC 2 cut(s) 389, 501
BsaJI CCNNGG 8 cut(s) 106, 155, 344, 380, 529, 678, 780, 814
BsaWI WCCGGW 2 cut(s) 295, 634
BsaXI ACNNNNNCTCC 2 cut(s) 688, 718
Bsc4I CCNNNNNNNGG 5 cut(s) 161, 210, 530, 634, 692
Bse8I GATNNNNATC 2 cut(s) 389, 501
BseAI TCCGGA 1 cut(s) 295
BseBI CCWGG 1 cut(s) 381
BseDI CCNNGG 8 cut(s) 106, 155, 344, 380, 529, 678, 780, 814
BseGI GGATG 2 cut(s) 261, 376
BseJI GATNNNNATC 2 cut(s) 389, 501
BseLI CCNNNNNNNGG 5 cut(s) 161, 210, 530, 634, 692
BseRI GAGGAG 2 cut(s) 57, 674
BseX3I CGGCCG 1 cut(s) 442
BseXI GCAGC 1 cut(s) 347
Bsh1236I CGCG 2 cut(s) 59, 575
Bsh1285I CGRYCG 1 cut(s) 445
BshFI GGCC 3 cut(s) 444, 610, 853
BsiEI CGRYCG 1 cut(s) 445
BsiHKCI CYCGRG 4 cut(s) 106, 654, 751, 825
BslFI GGGAC 3 cut(s) 251, 273, 709
BslI CCNNNNNNNGG 5 cut(s) 161, 210, 530, 634, 692
BsmAI GTCTC 2 cut(s) 465, 754
BsmFI GGGAC 3 cut(s) 251, 273, 709
BsnI GGCC 3 cut(s) 444, 610, 853
BsoBI CYCGRG 4 cut(s) 106, 654, 751, 825
Bsp1286I GDGCHC 2 cut(s) 42, 789
Bsp13I TCCGGA 1 cut(s) 295
Bsp143I GATC 3 cut(s) 24, 267, 502
Bsp19I CCATGG 1 cut(s) 814
BspACI CCGC 6 cut(s) 113, 333, 507, 540, 575, 693
BspANI GGCC 3 cut(s) 444, 610, 853
BspEI TCCGGA 1 cut(s) 295
BspFNI CGCG 2 cut(s) 59, 575
BspHI TCATGA 1 cut(s) 493
BspLI GGNNCC 5 cut(s) 111, 239, 552, 684, 739
BspMI ACCTGC 1 cut(s) 249
BspPI GGATC 2 cut(s) 32, 497
BssECI CCNNGG 8 cut(s) 106, 155, 344, 380, 529, 678, 780, 814
BssMI GATC 3 cut(s) 24, 267, 502
BssSI CACGAG 2 cut(s) 395, 788
BssT1I CCWWGG 2 cut(s) 155, 814
Bst2BI CACGAG 2 cut(s) 395, 788
Bst2UI CCWGG 1 cut(s) 381
Bst4CI ACNGT 4 cut(s) 233, 700, 731, 772
Bst6I CTCTTC 2 cut(s) 263, 618
BstDEI CTNAG 2 cut(s) 73, 401
BstDSI CCRYGG 1 cut(s) 814
BstEII GGTNACC 1 cut(s) 623
BstF5I GGATG 2 cut(s) 261, 376
BstFNI CGCG 2 cut(s) 59, 575
BstH2I RGCGCY 2 cut(s) 170, 322
BstHHI GCGC 3 cut(s) 61, 169, 321
BstKTI GATC 3 cut(s) 27, 270, 505
BstMAI GTCTC 2 cut(s) 465, 754
BstMBI GATC 3 cut(s) 24, 267, 502
BstMCI CGRYCG 1 cut(s) 445
BstMWI GCNNNNNNNGC 4 cut(s) 46, 520, 674, 809
BstNI CCWGG 1 cut(s) 381
BstPAI GACNNNNGTC 1 cut(s) 770
BstPI GGTNACC 1 cut(s) 623
BstSCI CCNGG 9 cut(s) 12, 44, 105, 106, 289, 344, 379, 419, 848
BstUI CGCG 2 cut(s) 59, 575
BstV1I GCAGC 1 cut(s) 347
BstV2I GAAGAC 1 cut(s) 480
BstX2I RGATCY 1 cut(s) 502
BstYI RGATCY 1 cut(s) 502
BstZI CGGCCG 1 cut(s) 442
BsuI GTATCC 1 cut(s) 378
BsuRI GGCC 3 cut(s) 444, 610, 853
BtgI CCRYGG 1 cut(s) 814
BtgZI GCGATG 1 cut(s) 357
BtsCI GGATG 2 cut(s) 261, 376
BveI ACCTGC 1 cut(s) 249
CciI TCATGA 1 cut(s) 493
CfoI GCGC 3 cut(s) 61, 169, 321
Cfr13I GGNCC 5 cut(s) 110, 238, 293, 683, 851
Cfr9I CCCGGG 1 cut(s) 106
CpoI CGGWCCG 1 cut(s) 293
Csp6I GTAC 2 cut(s) 172, 632
CspI CGGWCCG 1 cut(s) 293
CviAII CATG 5 cut(s) 248, 280, 494, 629, 815
CviQI GTAC 2 cut(s) 172, 632
DdeI CTNAG 2 cut(s) 73, 401
DpnI GATC 3 cut(s) 26, 269, 504
DpnII GATC 3 cut(s) 24, 267, 502
EaeI YGGCCR 1 cut(s) 442
EagI CGGCCG 1 cut(s) 442
Eam1104I CTCTTC 2 cut(s) 263, 618
EarI CTCTTC 2 cut(s) 263, 618
EciI GGCGGA 1 cut(s) 102
EclXI CGGCCG 1 cut(s) 442
Eco130I CCWWGG 2 cut(s) 155, 814
Eco147I AGGCCT 1 cut(s) 610
Eco24I GRGCYC 2 cut(s) 42, 789
Eco47I GGWCC 4 cut(s) 110, 238, 293, 683
Eco47III AGCGCT 2 cut(s) 168, 320
Eco52I CGGCCG 1 cut(s) 442
Eco88I CYCGRG 4 cut(s) 106, 654, 751, 825
Eco91I GGTNACC 1 cut(s) 623
EcoO109I RGGNCCY 2 cut(s) 238, 683
EcoO65I GGTNACC 1 cut(s) 623
EcoRII CCWGG 1 cut(s) 379
EcoT14I CCWWGG 2 cut(s) 155, 814
EcoT38I GRGCYC 2 cut(s) 42, 789
ErhI CCWWGG 2 cut(s) 155, 814
FaeI CATG 5 cut(s) 251, 283, 497, 632, 818
FaiI YATR 8 cut(s) 29, 201, 249, 281, 495, 546, 630, 816
FaqI GGGAC 3 cut(s) 251, 273, 709
FatI CATG 5 cut(s) 247, 279, 493, 628, 814
FauI CCCGC 3 cut(s) 340, 514, 686
FblI GTMKAC 1 cut(s) 189
Fnu4HI GCNGC 3 cut(s) 336, 540, 576
FokI GGATG 2 cut(s) 248, 363
FriOI GRGCYC 2 cut(s) 42, 789
Fsp4HI GCNGC 3 cut(s) 336, 540, 576
FspBI CTAG 1 cut(s) 581
GlaI GCGC 3 cut(s) 60, 168, 320
GluI GCNGC 3 cut(s) 336, 540, 576
HaeII RGCGCY 2 cut(s) 170, 322
HaeIII GGCC 3 cut(s) 444, 610, 853
HhaI GCGC 3 cut(s) 61, 169, 321
Hin1II CATG 5 cut(s) 251, 283, 497, 632, 818
Hin6I GCGC 3 cut(s) 59, 167, 319
HinP1I GCGC 3 cut(s) 59, 167, 319
HincII GTYRAC 1 cut(s) 190
HindII GTYRAC 1 cut(s) 190
HinfI GANTC 7 cut(s) 148, 310, 473, 485, 568, 797, 841
HphI GGTGA 3 cut(s) 607, 635, 830
Hpy166II GTNNAC 3 cut(s) 135, 190, 229
Hpy188I TCNGA 5 cut(s) 164, 478, 530, 765, 840
Hpy188III TCNNGA 7 cut(s) 265, 296, 314, 494, 656, 751, 753
Hpy8I GTNNAC 3 cut(s) 135, 190, 229
Hpy99I CGWCG 5 cut(s) 59, 194, 652, 731, 776
HpyAV CCTTC 2 cut(s) 372, 850
HpyCH4III ACNGT 4 cut(s) 233, 700, 731, 772
HpyF10VI GCNNNNNNNGC 4 cut(s) 46, 520, 674, 809
HpyF3I CTNAG 2 cut(s) 73, 401
Hsp92II CATG 5 cut(s) 251, 283, 497, 632, 818
HspAI GCGC 3 cut(s) 59, 167, 319
Kpn2I TCCGGA 1 cut(s) 295
Kzo9I GATC 3 cut(s) 24, 267, 502
LmnI GCTCC 5 cut(s) 104, 164, 423, 709, 808
Lsp1109I GCAGC 1 cut(s) 347
LweI GCATC 1 cut(s) 385
MaeI CTAG 1 cut(s) 581
MaeIII GTNAC 1 cut(s) 623
MalI GATC 3 cut(s) 26, 269, 504
MboI GATC 3 cut(s) 24, 267, 502
MboII GAAGA 4 cut(s) 250, 480, 512, 605
MflI RGATCY 1 cut(s) 502
MhlI GDGCHC 2 cut(s) 42, 789
MlyI GAGTC 2 cut(s) 467, 494
MmeI TCCRAC 2 cut(s) 142, 351
MroI TCCGGA 1 cut(s) 295
MspR9I CCNGG 9 cut(s) 14, 46, 107, 108, 291, 346, 381, 421, 850
MvaI CCWGG 1 cut(s) 381
MvnI CGCG 2 cut(s) 59, 575
MwoI GCNNNNNNNGC 4 cut(s) 46, 520, 674, 809
NciI CCSGG 8 cut(s) 14, 46, 107, 108, 291, 346, 421, 850
NcoI CCATGG 1 cut(s) 814
NdeII GATC 3 cut(s) 24, 267, 502
NlaIII CATG 5 cut(s) 251, 283, 497, 632, 818
NlaIV GGNNCC 5 cut(s) 111, 239, 552, 684, 739
NmeAIII GCCGAG 3 cut(s) 535, 703, 805
NmuCI GTSAC 1 cut(s) 623
PaeR7I CTCGAG 3 cut(s) 654, 751, 825
PagI TCATGA 1 cut(s) 493
PceI AGGCCT 1 cut(s) 610
PcsI WCGNNNNNNNCGW 2 cut(s) 189, 222
PfeI GAWTC 5 cut(s) 148, 310, 568, 797, 841
PkrI GCNGC 3 cut(s) 337, 541, 577
PleI GAGTC 2 cut(s) 467, 493
PpsI GAGTC 2 cut(s) 467, 493
PpuMI RGGWCCY 2 cut(s) 238, 683
PshAI GACNNNNGTC 1 cut(s) 770
Psp5II RGGWCCY 2 cut(s) 238, 683
Psp6I CCWGG 1 cut(s) 379
PspEI GGTNACC 1 cut(s) 623
PspGI CCWGG 1 cut(s) 379
PspN4I GGNNCC 5 cut(s) 111, 239, 552, 684, 739
PspPI GGNCC 5 cut(s) 110, 238, 293, 683, 851
PspPPI RGGWCCY 2 cut(s) 238, 683
PspXI VCTCGAGB 1 cut(s) 825
PsuI RGATCY 1 cut(s) 502
RsaI GTAC 2 cut(s) 173, 633
RsaNI GTAC 2 cut(s) 172, 632
Rsr2I CGGWCCG 1 cut(s) 293
RsrII CGGWCCG 1 cut(s) 293
SalI GTCGAC 1 cut(s) 188
SatI GCNGC 3 cut(s) 336, 540, 576
Sau3AI GATC 3 cut(s) 24, 267, 502
Sau96I GGNCC 5 cut(s) 110, 238, 293, 683, 851
SchI GAGTC 2 cut(s) 467, 494
ScrFI CCNGG 9 cut(s) 14, 46, 107, 108, 291, 346, 381, 421, 850
SduI GDGCHC 2 cut(s) 42, 789
SetI ASST 7 cut(s) 243, 364, 402, 437, 597, 606, 666
SfaNI GCATC 1 cut(s) 385
Sfr274I CTCGAG 3 cut(s) 654, 751, 825
SinI GGWCC 4 cut(s) 110, 238, 293, 683
SlaI CTCGAG 3 cut(s) 654, 751, 825
SmaI CCCGGG 1 cut(s) 108
SmlI CTYRAG 4 cut(s) 314, 654, 751, 825
SmoI CTYRAG 4 cut(s) 314, 654, 751, 825
SseBI AGGCCT 1 cut(s) 610
SsiI CCGC 6 cut(s) 113, 333, 507, 540, 575, 693
SspMI CTAG 1 cut(s) 581
StuI AGGCCT 1 cut(s) 610
StyD4I CCNGG 9 cut(s) 12, 44, 105, 106, 289, 344, 379, 419, 848
StyI CCWWGG 2 cut(s) 155, 814
TaaI ACNGT 4 cut(s) 233, 700, 731, 772
TaqI TCGA 6 cut(s) 129, 189, 655, 752, 774, 826
TatI WGTACW 1 cut(s) 171
TauI GCSGC 2 cut(s) 542, 578
TfiI GAWTC 5 cut(s) 148, 310, 568, 797, 841
TseFI GTSAC 1 cut(s) 623
TseI GCWGC 1 cut(s) 335
Tsp45I GTSAC 1 cut(s) 623
TspDTI ATGAA 2 cut(s) 250, 513
TspGWI ACGGA 1 cut(s) 214
TspMI CCCGGG 1 cut(s) 106
VpaK11BI GGWCC 4 cut(s) 110, 238, 293, 683
XhoI CTCGAG 3 cut(s) 654, 751, 825
XmaI CCCGGG 1 cut(s) 106
XmiI GTMKAC 1 cut(s) 189
XspI CTAG 1 cut(s) 581
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.