Rmu_sc0001373.1_g000001

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001373.1
OG0000214
Physical Location & Seq
Forward (+)
1 .. 5182
5182 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001373.1_g000001.1.cds

Sequence Viewer

Length: 2129 bp
ggccactcactggcccaactaataaagtaattggtgattttacaagttggggaccaaggaggaaagtgggcttctggtctaccgtcactcccgaggaaaatgtttggtatcaggaggtccgagcgagagatttggaccgatgggacgcggtgggtatcacccaaaccatcgatctatgcttctgtcttccccataatactagcgctgcaccgctagccgccgctctttgcttctggaatacctctagcaatacattcgatttccggtttgggcagatgagcataactctgctggatgttcttaccatcacggggttgcccattgactttgacccctatgtgcatggtcaatttgatggcattcaattttctttgagaatggatatggctggtcgagggcatcacaacaaatcctacccattctggcgcgactattactgcacccagcgagaccatacaggaggtattgcattcctggaattctggctttgcaaatttatcttttgcacttcttccaacaaacctattgggccctggaattctctggccactgctctctacaatggtatttgcgttggccttgggcaacctatttatttccctcgcttccgtggcgaggatattccaaaggaacctccagtcgattcccttttggggaactggctttgccgcaatgtaaggtatcaagctcctccctactctgagtgttttatttacttgtacttgctgggagagatgccggacccaaaaatagtcctttctaggcatttccctcctccccttgacgatggctttctacccaatggacgggatcatagcgaaagagccctcctggcctttcgtcgcgctatctcctgcttggatattcgtcttgccaccgactgcgtaagttatgagctctatgcccctaaccacttcgctcgccaatttgggttggcccagttggtaccctggcctctggttgattctgccaattattacacctcttggcggagattagccccacctgggtctgccccctttcagagtcagtttactttgatagtgattcccccttggctcagagcgttgtaccccctcaacgatgtcgacgatgattatgttgattggcggaaagaagtgtccgtgaactgttgggacctgccacatgacgaactcttcgtcctgatctttcgtggcatgaagattctcgtggcactagaggttcaagaggtgaatgaggcggggcctcttcctcttggtgaccacgtaccagatattgacccgacagctcgaaaggattctgtttgtaccaaggaggtgggaacaaacactgagggtcctatcggcgggacagtcgccccagagatggaaaatgatactaatggtggtggtgccccccaagtctcgcaaacaaatgagacaaccgtcgaagctgagggctctgtgcttgaatctgctccaattgcctatggtgagccgcgaattgagtttccagaatccccttcggatgaagggatagaccaacctattgaagatgaagaaactaaagaggctgtccacccttttgcattggtggttcgtgatcctgtggcgcatccgccacctcctcctcctaccatattcgagagattgatgaggatgttggaggtaattcctccttctgctgtggatgaggctaaaatggtgcttcgcaaacatctgggtcctcaggagaaggtattgaccctgcagcaatttagtgctattgatgatctgttgaatgaacttggtagggctcgccgccatcaatcaaccgcgaacacccaggctcgggatgctcaagaggctttgaatagtgtctctcaagaaatggacatctcccgcgatattttaaatgaacgatccatccgcctgcgggaactacaaatccaaaggtccgacttcaaacttcaaatcgaggatctccaagcccgtttagcttttgttgagaatgcgattgttgcagaagaagctcaactcgatgaacctttggctgcttctgaagaaatgggcctcaacttggcccatatcagagatcgggccactcaggccgaagctggtgctattgaggcgaaacgccacgtggaggaactttgtttgaaattgagctttgtgggccaatctttgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

708

Amino Acids

79.59

Weight (kDa)

4.85

Isoelectric Point (pI)

45.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000214)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0079611
rosa_multiflora Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha Rh3DG208400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1148
Acc65I GGTACC 1 cut(s) 945
AccB1I GGYRCC 2 cut(s) 945, 1372
AccB7I CCANNNNNTGG 1 cut(s) 10
AccBSI CCGCTC 1 cut(s) 223
AccI GTMKAC 2 cut(s) 79, 1088
AccII CGCG 6 cut(s) 148, 428, 845, 1461, 1777, 1844
AclWI GGATC 4 cut(s) 818, 1558, 1856, 1928
AcoI YGGCCR 1 cut(s) 545
AcsI RAATTY 3 cut(s) 478, 493, 537
AcuI CTGAAG 1 cut(s) 2021
AcvI CACGTG 1 cut(s) 2082
AfaI GTAC 5 cut(s) 721, 947, 1072, 1250, 1290
AfeI AGCGCT 1 cut(s) 204
AgsI TTSAA 9 cut(s) 364, 1207, 1432, 1513, 1740, 1812, 1905, 1912, 2100
AjnI CCWGG 6 cut(s) 473, 532, 830, 949, 1005, 1784
AloI GAACNNNNNNTCC 6 cut(s) 1145, 1177, 1850, 1871, 1882, 1903
AluBI AGCT 8 cut(s) 688, 897, 1270, 1414, 1939, 1972, 2056, 2108
AluI AGCT 8 cut(s) 688, 897, 1270, 1414, 1939, 1972, 2056, 2108
Alw21I GWGCWC 1 cut(s) 899
Alw26I GTCTC 4 cut(s) 443, 1389, 1393, 1824
AlwI GGATC 4 cut(s) 818, 1558, 1856, 1928
Ama87I CYCGRG 2 cut(s) 91, 1790
Aor51HI AGCGCT 1 cut(s) 204
ApaI GGGCCC 1 cut(s) 533
ApeKI GCWGC 3 cut(s) 205, 1710, 1993
ApoI RAATTY 3 cut(s) 478, 493, 537
ArsI GACNNNNNNTTYG 4 cut(s) 1141, 1145, 1173, 1177
Asp700I GAANNNNTTC 1 cut(s) 1278
Asp718I GGTACC 1 cut(s) 945
AspLEI GCGC 4 cut(s) 205, 428, 847, 1575
AsuHPI GGTGA 5 cut(s) 46, 150, 1224, 1252, 1465
AsuNHI GCTAGC 1 cut(s) 213
AvaI CYCGRG 2 cut(s) 91, 1790
AvaII GGWCC 8 cut(s) 52, 117, 135, 741, 1137, 1318, 1684, 1895
AxyI CCTNAGG 1 cut(s) 1688
BaeGI GKGCMC 2 cut(s) 533, 1377
BalI TGGCCA 1 cut(s) 547
BanI GGYRCC 2 cut(s) 945, 1372
BanII GRGCYC 5 cut(s) 533, 828, 899, 1423, 1758
BauI CACGAG 1 cut(s) 1189
BbrPI CACGTG 1 cut(s) 2082
BbsI GAAGAC 1 cut(s) 178
Bbv12I GWGCWC 1 cut(s) 899
BbvCI CCTCAGC 1 cut(s) 1415
BbvI GCAGC 3 cut(s) 192, 1722, 1980
BccI CCATC 8 cut(s) 134, 175, 313, 349, 781, 1341, 1772, 1873
BcgI CGANNNNNNTGC 4 cut(s) 237, 271, 2041, 2075
BciT130I CCWGG 6 cut(s) 475, 534, 832, 951, 1007, 1786
BcoDI GTCTC 4 cut(s) 443, 1389, 1393, 1824
BfaI CTAG 5 cut(s) 200, 214, 245, 761, 1198
BfmI CTRYAG 1 cut(s) 1708
BfoI RGCGCY 1 cut(s) 206
BfuAI ACCTGC 1 cut(s) 1148
BglI GCCNNNNNGGC 2 cut(s) 832, 2047
BisI GCNGC 8 cut(s) 206, 218, 221, 669, 1459, 1711, 1761, 1994
BlsI GCNGC 8 cut(s) 207, 219, 222, 670, 1460, 1712, 1762, 1995
Bme1390I CCNGG 6 cut(s) 475, 534, 832, 951, 1007, 1786
Bme18I GGWCC 8 cut(s) 52, 117, 135, 741, 1137, 1318, 1684, 1895
BmeT110I CYCGRG 2 cut(s) 91, 1790
BmrFI CCNGG 6 cut(s) 475, 534, 832, 951, 1007, 1786
BmrI ACTGGG 1 cut(s) 933
BmsI GCATC 4 cut(s) 408, 725, 1584, 1785
BmtI GCTAGC 1 cut(s) 217
BmuI ACTGGG 1 cut(s) 933
BoxI GACNNNNGTC 1 cut(s) 1405
BpiI GAAGAC 1 cut(s) 178
BplI GAGNNNNNCTC 2 cut(s) 270, 302
BpmI CTGGAG 1 cut(s) 620
Bpu10I CCTNAGC 1 cut(s) 1415
BpuEI CTTGAG 2 cut(s) 1784, 1808
Bsa29I ATCGAT 1 cut(s) 170
BsaAI YACGTR 2 cut(s) 1248, 2082
BsaI GGTCTC 1 cut(s) 443
BsaWI WCCGGW 1 cut(s) 263
BsaXI ACNNNNNCTCC 2 cut(s) 72, 102
Bse1I ACTGG 4 cut(s) 15, 637, 664, 939
Bse21I CCTNAGG 1 cut(s) 1688
Bse3DI GCAATG 1 cut(s) 678
BseBI CCWGG 6 cut(s) 475, 534, 832, 951, 1007, 1786
BseCI ATCGAT 1 cut(s) 170
BseGI GGATG 7 cut(s) 300, 1494, 1575, 1625, 1656, 1800, 1865
BseMI GCAATG 1 cut(s) 678
BseMII CTCAG 6 cut(s) 692, 1074, 1304, 1406, 1702, 2059
BseNI ACTGG 4 cut(s) 15, 637, 664, 939
BseRI GAGGAG 4 cut(s) 680, 764, 1577, 1580
BseSI GKGCMC 2 cut(s) 533, 1377
BseXI GCAGC 3 cut(s) 192, 1722, 1980
BseYI CCCAGC 2 cut(s) 443, 726
BsgI GTGCAG 2 cut(s) 191, 423
Bsh1236I CGCG 6 cut(s) 148, 428, 845, 1461, 1777, 1844
BshNI GGYRCC 2 cut(s) 945, 1372
BshVI ATCGAT 1 cut(s) 170
BsiHKAI GWGCWC 1 cut(s) 899
BsiHKCI CYCGRG 2 cut(s) 91, 1790
BsiSI CCGG 2 cut(s) 264, 739
BslFI GGGAC 4 cut(s) 65, 157, 1150, 1344
BsmAI GTCTC 4 cut(s) 443, 1389, 1393, 1824
BsmFI GGGAC 4 cut(s) 65, 157, 1150, 1344
BsmI GAATGC 3 cut(s) 359, 469, 1956
Bso31I GGTCTC 1 cut(s) 443
BsoBI CYCGRG 2 cut(s) 91, 1790
Bsp120I GGGCCC 1 cut(s) 529
Bsp1286I GDGCHC 6 cut(s) 533, 828, 899, 1377, 1423, 1758
Bsp143I GATC 8 cut(s) 171, 810, 1166, 1563, 1731, 1861, 1920, 2034
BspCNI CTCAG 6 cut(s) 693, 1073, 1305, 1407, 1701, 2058
BspDI ATCGAT 1 cut(s) 170
BspFNI CGCG 6 cut(s) 148, 428, 845, 1461, 1777, 1844
BspMAI CTGCAG 1 cut(s) 1712
BspMI ACCTGC 1 cut(s) 1148
BspOI GCTAGC 1 cut(s) 217
BspPI GGATC 4 cut(s) 818, 1558, 1856, 1928
BspT107I GGYRCC 2 cut(s) 945, 1372
BspTNI GGTCTC 1 cut(s) 443
BsrBI CCGCTC 1 cut(s) 223
BsrDI GCAATG 1 cut(s) 678
BsrI ACTGG 4 cut(s) 15, 637, 664, 939
BssMI GATC 8 cut(s) 171, 810, 1166, 1563, 1731, 1861, 1920, 2034
BssSI CACGAG 1 cut(s) 1189
BssT1I CCWWGG 4 cut(s) 55, 579, 1054, 1292
Bst2BI CACGAG 1 cut(s) 1189
Bst2UI CCWGG 6 cut(s) 475, 534, 832, 951, 1007, 1786
Bst4CI ACNGT 4 cut(s) 84, 1132, 1335, 1407
Bst6I CTCTTC 2 cut(s) 1162, 1235
BstBAI YACGTR 2 cut(s) 1248, 2082
BstC8I GCNNGC 4 cut(s) 215, 921, 1758, 1873
BstDEI CTNAG 6 cut(s) 701, 1060, 1313, 1415, 1688, 2045
BstDSI CCRYGG 1 cut(s) 609
BstEII GGTNACC 1 cut(s) 1240
BstF5I GGATG 7 cut(s) 300, 1494, 1575, 1625, 1656, 1800, 1865
BstFNI CGCG 6 cut(s) 148, 428, 845, 1461, 1777, 1844
BstH2I RGCGCY 1 cut(s) 206
BstHHI GCGC 4 cut(s) 205, 428, 847, 1575
BstKTI GATC 8 cut(s) 174, 813, 1169, 1566, 1734, 1864, 1923, 2037
BstMAI GTCTC 4 cut(s) 443, 1389, 1393, 1824
BstMBI GATC 8 cut(s) 171, 810, 1166, 1563, 1731, 1861, 1920, 2034
BstNI CCWGG 6 cut(s) 475, 534, 832, 951, 1007, 1786
BstPAI GACNNNNGTC 1 cut(s) 1405
BstPI GGTNACC 1 cut(s) 1240
BstSCI CCNGG 6 cut(s) 473, 532, 830, 949, 1005, 1784
BstSFI CTRYAG 1 cut(s) 1708
BstSLI GKGCMC 2 cut(s) 533, 1377
BstUI CGCG 6 cut(s) 148, 428, 845, 1461, 1777, 1844
BstV1I GCAGC 3 cut(s) 192, 1722, 1980
BstV2I GAAGAC 1 cut(s) 178
BstX2I RGATCY 1 cut(s) 1920
BstXI CCANNNNNNTGG 1 cut(s) 1299
BstYI RGATCY 1 cut(s) 1920
Bsu15I ATCGAT 1 cut(s) 170
Bsu36I CCTNAGG 1 cut(s) 1688
BsuTUI ATCGAT 1 cut(s) 170
BtgI CCRYGG 1 cut(s) 609
BtsCI GGATG 7 cut(s) 300, 1494, 1575, 1625, 1656, 1800, 1865
BtsI GCAGTG 1 cut(s) 548
BtsIMutI CAGTG 3 cut(s) 8, 548, 1310
BveI ACCTGC 1 cut(s) 1148
Cac8I GCNNGC 4 cut(s) 215, 921, 1758, 1873
CfoI GCGC 4 cut(s) 205, 428, 847, 1575
ClaI ATCGAT 1 cut(s) 170
CseI GACGC 1 cut(s) 154
Csp6I GTAC 5 cut(s) 720, 946, 1071, 1249, 1289
CviAII CATG 3 cut(s) 343, 1147, 1179
CviQI GTAC 5 cut(s) 720, 946, 1071, 1249, 1289
DdeI CTNAG 6 cut(s) 701, 1060, 1313, 1415, 1688, 2045
DpnI GATC 8 cut(s) 173, 812, 1168, 1565, 1733, 1863, 1922, 2036
DpnII GATC 8 cut(s) 171, 810, 1166, 1563, 1731, 1861, 1920, 2034
DraI TTTAAA 1 cut(s) 1853
EaeI YGGCCR 1 cut(s) 545
Eam1104I CTCTTC 2 cut(s) 1162, 1235
EarI CTCTTC 2 cut(s) 1162, 1235
EciI GGCGGA 4 cut(s) 1005, 1125, 1568, 1858
Ecl136II GAGCTC 1 cut(s) 897
Eco130I CCWWGG 4 cut(s) 55, 579, 1054, 1292
Eco24I GRGCYC 5 cut(s) 533, 828, 899, 1423, 1758
Eco31I GGTCTC 1 cut(s) 443
Eco47I GGWCC 8 cut(s) 52, 117, 135, 741, 1137, 1318, 1684, 1895
Eco47III AGCGCT 1 cut(s) 204
Eco53kI GAGCTC 1 cut(s) 897
Eco57I CTGAAG 1 cut(s) 2021
Eco72I CACGTG 1 cut(s) 2082
Eco81I CCTNAGG 1 cut(s) 1688
Eco88I CYCGRG 2 cut(s) 91, 1790
Eco91I GGTNACC 1 cut(s) 1240
EcoICRI GAGCTC 1 cut(s) 897
EcoO109I RGGNCCY 5 cut(s) 530, 1137, 1225, 1318, 1684
EcoO65I GGTNACC 1 cut(s) 1240
EcoRI GAATTC 2 cut(s) 478, 537
EcoRII CCWGG 6 cut(s) 473, 532, 830, 949, 1005, 1784
EcoT14I CCWWGG 4 cut(s) 55, 579, 1054, 1292
EcoT38I GRGCYC 5 cut(s) 533, 828, 899, 1423, 1758
ErhI CCWWGG 4 cut(s) 55, 579, 1054, 1292
FaeI CATG 3 cut(s) 346, 1150, 1182
FaqI GGGAC 4 cut(s) 65, 157, 1150, 1344
FatI CATG 3 cut(s) 342, 1146, 1178
FauI CCCGC 4 cut(s) 1215, 1321, 1849, 1868
FblI GTMKAC 2 cut(s) 79, 1088
Fnu4HI GCNGC 8 cut(s) 206, 218, 221, 669, 1459, 1711, 1761, 1994
FokI GGATG 7 cut(s) 307, 1501, 1562, 1632, 1663, 1807, 1852
FriOI GRGCYC 5 cut(s) 533, 828, 899, 1423, 1758
Fsp4HI GCNGC 8 cut(s) 206, 218, 221, 669, 1459, 1711, 1761, 1994
FspBI CTAG 5 cut(s) 200, 214, 245, 761, 1198
GlaI GCGC 4 cut(s) 204, 427, 846, 1574
GluI GCNGC 8 cut(s) 206, 218, 221, 669, 1459, 1711, 1761, 1994
GsaI CCCAGC 2 cut(s) 447, 730
GsuI CTGGAG 1 cut(s) 620
HaeII RGCGCY 1 cut(s) 206
HapII CCGG 2 cut(s) 264, 739
HgaI GACGC 1 cut(s) 154
HhaI GCGC 4 cut(s) 205, 428, 847, 1575
Hin1II CATG 3 cut(s) 346, 1150, 1182
Hin6I GCGC 4 cut(s) 203, 426, 845, 1573
HinP1I GCGC 4 cut(s) 203, 426, 845, 1573
HincII GTYRAC 1 cut(s) 1089
HindII GTYRAC 1 cut(s) 1089
HinfI GANTC 8 cut(s) 643, 964, 1026, 1047, 1185, 1279, 1432, 1477
HpaII CCGG 2 cut(s) 264, 739
HphI GGTGA 5 cut(s) 46, 150, 1224, 1252, 1465
Hpy166II GTNNAC 5 cut(s) 80, 1034, 1089, 1128, 1539
Hpy188I TCNGA 8 cut(s) 121, 702, 1025, 1063, 1488, 1899, 2001, 2032
Hpy8I GTNNAC 5 cut(s) 80, 1034, 1089, 1128, 1539
Hpy99I CGWCG 3 cut(s) 845, 1093, 1411
HpyAV CCTTC 4 cut(s) 1486, 1493, 1649, 1689
HpyCH4III ACNGT 4 cut(s) 84, 1132, 1335, 1407
HpyCH4IV ACGT 2 cut(s) 1247, 2081
HpyCH4V TGCA 9 cut(s) 208, 342, 440, 469, 491, 506, 1549, 1710, 1963
HpyF3I CTNAG 6 cut(s) 701, 1060, 1313, 1415, 1688, 2045
HpySE526I ACGT 2 cut(s) 1247, 2081
Hsp92II CATG 3 cut(s) 346, 1150, 1182
HspAI GCGC 4 cut(s) 203, 426, 845, 1573
KpnI GGTACC 1 cut(s) 949
Kzo9I GATC 8 cut(s) 171, 810, 1166, 1563, 1731, 1861, 1920, 2034
LmnI GCTCC 2 cut(s) 693, 1443
Lsp1109I GCAGC 3 cut(s) 192, 1722, 1980
LweI GCATC 4 cut(s) 408, 725, 1584, 1785
MaeI CTAG 5 cut(s) 200, 214, 245, 761, 1198
MaeII ACGT 2 cut(s) 1247, 2081
MaeIII GTNAC 2 cut(s) 84, 1240
MalI GATC 8 cut(s) 173, 812, 1168, 1565, 1733, 1863, 1922, 2036
MbiI CCGCTC 1 cut(s) 223
MboI GATC 8 cut(s) 171, 810, 1166, 1563, 1731, 1861, 1920, 2034
MboII GAAGA 9 cut(s) 178, 503, 1149, 1194, 1222, 1525, 1531, 1978, 2014
MfeI CAATTG 1 cut(s) 1442
MflI RGATCY 1 cut(s) 1920
MhlI GDGCHC 6 cut(s) 533, 828, 899, 1377, 1423, 1758
MlsI TGGCCA 1 cut(s) 547
MluNI TGGCCA 1 cut(s) 547
MlyI GAGTC 1 cut(s) 1035
MmeI TCCRAC 3 cut(s) 539, 1604, 1922
Mox20I TGGCCA 1 cut(s) 547
MroXI GAANNNNTTC 1 cut(s) 1278
MscI TGGCCA 1 cut(s) 547
MseI TTAA 1 cut(s) 1852
Msp20I TGGCCA 1 cut(s) 547
MspI CCGG 2 cut(s) 264, 739
MspR9I CCNGG 6 cut(s) 475, 534, 832, 951, 1007, 1786
MunI CAATTG 1 cut(s) 1442
Mva1269I GAATGC 3 cut(s) 359, 469, 1956
MvaI CCWGG 6 cut(s) 475, 534, 832, 951, 1007, 1786
MvnI CGCG 6 cut(s) 148, 428, 845, 1461, 1777, 1844
NdeII GATC 8 cut(s) 171, 810, 1166, 1563, 1731, 1861, 1920, 2034
NheI GCTAGC 1 cut(s) 213
NlaIII CATG 3 cut(s) 346, 1150, 1182
NmuCI GTSAC 2 cut(s) 84, 1240
PcsI WCGNNNNNNNCGW 2 cut(s) 1088, 1157
PctI GAATGC 3 cut(s) 359, 469, 1956
PdmI GAANNNNTTC 1 cut(s) 1278
PfeI GAWTC 7 cut(s) 643, 964, 1047, 1185, 1279, 1432, 1477
PflMI CCANNNNNTGG 1 cut(s) 10
PfoI TCCNGGA 1 cut(s) 473
PkrI GCNGC 8 cut(s) 207, 219, 222, 670, 1460, 1712, 1762, 1995
PleI GAGTC 1 cut(s) 1034
PmaCI CACGTG 1 cut(s) 2082
PmlI CACGTG 1 cut(s) 2082
PpsI GAGTC 1 cut(s) 1034
Ppu21I YACGTR 2 cut(s) 1248, 2082
PpuMI RGGWCCY 3 cut(s) 1137, 1318, 1684
PshAI GACNNNNGTC 1 cut(s) 1405
Psp124BI GAGCTC 1 cut(s) 899
Psp5II RGGWCCY 3 cut(s) 1137, 1318, 1684
Psp6I CCWGG 6 cut(s) 473, 532, 830, 949, 1005, 1784
PspCI CACGTG 1 cut(s) 2082
PspEI GGTNACC 1 cut(s) 1240
PspFI CCCAGC 2 cut(s) 443, 726
PspGI CCWGG 6 cut(s) 473, 532, 830, 949, 1005, 1784
PspOMI GGGCCC 1 cut(s) 529
PspPPI RGGWCCY 3 cut(s) 1137, 1318, 1684
PstI CTGCAG 1 cut(s) 1712
PsuI RGATCY 1 cut(s) 1920
RsaI GTAC 5 cut(s) 721, 947, 1072, 1250, 1290
RsaNI GTAC 5 cut(s) 720, 946, 1071, 1249, 1289
SacI GAGCTC 1 cut(s) 899
SalI GTCGAC 1 cut(s) 1087
SaqAI TTAA 1 cut(s) 1852
SatI GCNGC 8 cut(s) 206, 218, 221, 669, 1459, 1711, 1761, 1994
Sau3AI GATC 8 cut(s) 171, 810, 1166, 1563, 1731, 1861, 1920, 2034
SchI GAGTC 1 cut(s) 1035
ScrFI CCNGG 6 cut(s) 475, 534, 832, 951, 1007, 1786
SduI GDGCHC 6 cut(s) 533, 828, 899, 1377, 1423, 1758
SfaNI GCATC 4 cut(s) 408, 725, 1584, 1785
SfcI CTRYAG 1 cut(s) 1708
SfiI GGCCNNNNNGGCC 1 cut(s) 2047
SinI GGWCC 8 cut(s) 52, 117, 135, 741, 1137, 1318, 1684, 1895
SmlI CTYRAG 2 cut(s) 1799, 1823
SmoI CTYRAG 2 cut(s) 1799, 1823
SspMI CTAG 5 cut(s) 200, 214, 245, 761, 1198
SstI GAGCTC 1 cut(s) 899
StyD4I CCNGG 6 cut(s) 473, 532, 830, 949, 1005, 1784
StyI CCWWGG 4 cut(s) 55, 579, 1054, 1292
TaaI ACNGT 4 cut(s) 84, 1132, 1335, 1407
TaiI ACGT 2 cut(s) 1250, 2084
TaqII GACCGA 1 cut(s) 152
TatI WGTACW 1 cut(s) 719
TauI GCSGC 5 cut(s) 220, 223, 671, 1461, 1763
TfiI GAWTC 7 cut(s) 643, 964, 1047, 1185, 1279, 1432, 1477
Tru1I TTAA 1 cut(s) 1852
Tru9I TTAA 1 cut(s) 1852
TscAI CASTG 3 cut(s) 15, 555, 1317
TseFI GTSAC 2 cut(s) 84, 1240
TseI GCWGC 3 cut(s) 205, 1710, 1993
Tsp45I GTSAC 2 cut(s) 84, 1240
TspDTI ATGAA 6 cut(s) 1195, 1505, 1532, 1757, 1871, 1997
TspGWI ACGGA 2 cut(s) 598, 1113
TspRI CASTG 3 cut(s) 15, 555, 1317
Van91I CCANNNNNTGG 1 cut(s) 10
VpaK11BI GGWCC 8 cut(s) 52, 117, 135, 741, 1137, 1318, 1684, 1895
XapI RAATTY 3 cut(s) 478, 493, 537
XmiI GTMKAC 2 cut(s) 79, 1088
XmnI GAANNNNTTC 1 cut(s) 1278
XspI CTAG 5 cut(s) 200, 214, 245, 761, 1198
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.