Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0008698.1

Orthogroup ID

OG0000214

Physical Location & Seq

Genomic Coordinates Forward (+)

4486 .. 7629

Gene Structure 3144 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0008698.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1155 bp

atgagggtgttagaggtaactcctccttctgctgtggatgaggctaagatggtgcttcatgaacatctgggtcctcaggtattggagactgacatcctctcgcgagtcttggaagccctaaggtatctttgccaggagaaggcattgacccagcagcaatttagtgccattgacgatctgctgaatgaacttggtgaggcccgccaacgtcaaccggccgcgaacgcccaggctcacgacactcgagaggctttgaatagcctctctcgagaaatggacatctctcgcggtattttaaatgagcgaaccaaccgcctgcgggaactacaaatccaaaggtccgacttcaaacttcggatcgaggacctccatacaggtttagcctttgttgaaaacgcgattgctacagaagaagcccaactcgatgaacttctggctgcttctgaagaaatgggccgcaacctggcccatctcagagaacgggccactcaggccgaagctagtgctattgctgcgaatctccgcgtggaggaactttgcttgaaattgagcttcatgggccaatctctgcttcagattggtttagaaacacgagggggctccaagtgtgggatctccggtcatgtaagatcattttttgagaaaatcccatacgctgagcgaaacggggagagggaggacggccactctgaggttcatctttcctcctctgtttcctttcttctggacctggcccgtgttgtgccctccagatggaaggggctttggtccccaactatagagcagattcagaggatctggctccagctgaaatggtacggcaagatcgagttcaagaacgtctatttttggttcgtgaaccaaagggctcgggagaagcggaagaagaggtccactttggatgttcatgtgcccatgcaaagatcagggcttgttggtgatgacaatggtaccaattggaaacctgaggatcagtatattaacttagaatcttctgcatctgcttctgcttcttcagctggtgtgattgcttttaacgggcagatggggaattatggtggttatggatctatgaacatggagattgaaacccttcctctgttccccatgcatggtgaggacatctttggtaacatgaagactacttccgattga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001763 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0009933 GO:0009987 GO:0010014 GO:0010016 GO:0010223 GO:0010346 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019827 GO:0022412 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048507 GO:0048532 GO:0048608 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0080166 GO:0090506 GO:0090567 GO:0098727 GO:0099402 GO:0140110 GO:1903506 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox

Protein Analysis

384

Amino Acids

43.3

Weight (kDa)

5.6

Isoelectric Point (pI)

42.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000214)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr5g0079611
rosa_multiflora	Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii	Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha	Rh3DG208400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	950
AccB1I	GGYRCC	1 cut(s)	950
AccII	CGCG	5 cut(s)	103, 221, 288, 398, 525
AciI	CCGC	8 cut(s)	202, 219, 288, 313, 319, 457, 523, 880
AclWI	GGATC	5 cut(s)	365, 620, 803, 978, 1075
AcoI	YGGCCR	2 cut(s)	216, 682
AcuI	CTGAAG	3 cut(s)	465, 557, 999
AfaI	GTAC	2 cut(s)	818, 952
AfiI	CCNNNNNNNGG	8 cut(s)	139, 319, 463, 529, 609, 691, 753, 1112
AgsI	TTSAA	6 cut(s)	256, 349, 392, 544, 835, 1088
AjnI	CCWGG	4 cut(s)	132, 228, 462, 729
AjuI	GAANNNNNNNTTGG	2 cut(s)	555, 587
AloI	GAACNNNNNNTCC	2 cut(s)	315, 347
AluBI	AGCT	4 cut(s)	500, 552, 808, 1019
AluI	AGCT	4 cut(s)	500, 552, 808, 1019
Alw26I	GTCTC	1 cut(s)	80
AlwI	GGATC	5 cut(s)	365, 620, 803, 978, 1075
Ama87I	CYCGRG	3 cut(s)	243, 267, 870
AoxI	GGCC	9 cut(s)	198, 216, 454, 465, 483, 492, 559, 682, 732
ApeKI	GCWGC	3 cut(s)	154, 437, 512
Asp700I	GAANNNNTTC	1 cut(s)	1092
Asp718I	GGTACC	1 cut(s)	950
AsuHPI	GGTGA	3 cut(s)	206, 950, 1127
AvaI	CYCGRG	3 cut(s)	243, 267, 870
AvaII	GGWCC	6 cut(s)	71, 339, 364, 727, 768, 891
AxyI	CCTNAGG	3 cut(s)	75, 119, 966
BaeGI	GKGCMC	2 cut(s)	747, 915
BaeI	ACNNNNGTAYC	2 cut(s)	934, 967
BanI	GGYRCC	1 cut(s)	950
BanII	GRGCYC	2 cut(s)	602, 871
BauI	CACGAG	1 cut(s)	591
BbsI	GAAGAC	1 cut(s)	1145
BbvI	GCAGC	3 cut(s)	166, 424, 499
BccI	CCATC	4 cut(s)	43, 477, 747, 1039
BceAI	ACGGC	2 cut(s)	697, 835
BcgI	CGANNNNNNTGC	2 cut(s)	485, 519
BciT130I	CCWGG	4 cut(s)	134, 230, 464, 731
BcoDI	GTCTC	1 cut(s)	80
BfaI	CTAG	1 cut(s)	501
BfmI	CTRYAG	2 cut(s)	405, 777
BglI	GCCNNNNNGGC	1 cut(s)	491
BisI	GCNGC	5 cut(s)	155, 219, 438, 457, 513
BlpI	GCTNAGC	1 cut(s)	657
BlsI	GCNGC	5 cut(s)	156, 220, 439, 458, 514
Bme1390I	CCNGG	4 cut(s)	134, 230, 464, 731
Bme18I	GGWCC	6 cut(s)	71, 339, 364, 727, 768, 891
BmeT110I	CYCGRG	3 cut(s)	243, 267, 870
BmiI	GGNNCC	5 cut(s)	72, 601, 770, 803, 952
BmrFI	CCNGG	4 cut(s)	134, 230, 464, 731
BmsI	GCATC	1 cut(s)	1007
BpiI	GAAGAC	1 cut(s)	1145
BpmI	CTGGAG	2 cut(s)	733, 788
Bpu1102I	GCTNAGC	1 cut(s)	657
BsaJI	CCNNGG	1 cut(s)	228
BsaWI	WCCGGW	1 cut(s)	617
Bsc4I	CCNNNNNNNGG	8 cut(s)	139, 319, 463, 529, 609, 691, 753, 1112
Bse118I	RCCGGY	1 cut(s)	214
Bse21I	CCTNAGG	3 cut(s)	75, 119, 966
BseBI	CCWGG	4 cut(s)	134, 230, 464, 731
BseDI	CCNNGG	1 cut(s)	228
BseGI	GGATG	3 cut(s)	43, 93, 907
BseLI	CCNNNNNNNGG	8 cut(s)	139, 319, 463, 529, 609, 691, 753, 1112
BseMII	CTCAG	6 cut(s)	89, 487, 503, 648, 681, 957
BseRI	GAGGAG	2 cut(s)	12, 697
BseSI	GKGCMC	2 cut(s)	747, 915
BseX3I	CGGCCG	1 cut(s)	216
BseXI	GCAGC	3 cut(s)	166, 424, 499
BseYI	CCCAGC	1 cut(s)	150
Bsh1236I	CGCG	5 cut(s)	103, 221, 288, 398, 525
Bsh1285I	CGRYCG	1 cut(s)	219
BshFI	GGCC	9 cut(s)	200, 218, 456, 467, 485, 494, 561, 684, 734
BshNI	GGYRCC	1 cut(s)	950
BsiEI	CGRYCG	1 cut(s)	219
BsiHKCI	CYCGRG	3 cut(s)	243, 267, 870
BsiSI	CCGG	2 cut(s)	215, 618
BslFI	GGGAC	1 cut(s)	754
BslI	CCNNNNNNNGG	8 cut(s)	139, 319, 463, 529, 609, 691, 753, 1112
BsmAI	GTCTC	1 cut(s)	80
BsmFI	GGGAC	1 cut(s)	754
BsnI	GGCC	9 cut(s)	200, 218, 456, 467, 485, 494, 561, 684, 734
BsoBI	CYCGRG	3 cut(s)	243, 267, 870
Bsp1286I	GDGCHC	4 cut(s)	602, 747, 871, 915
Bsp143I	GATC	9 cut(s)	175, 357, 612, 629, 795, 825, 923, 970, 1067
Bsp1720I	GCTNAGC	1 cut(s)	657
Bsp68I	TCGCGA	1 cut(s)	103
BspACI	CCGC	8 cut(s)	202, 219, 288, 313, 319, 457, 523, 880
BspANI	GGCC	9 cut(s)	200, 218, 456, 467, 485, 494, 561, 684, 734
BspCNI	CTCAG	6 cut(s)	88, 486, 502, 649, 682, 958
BspFNI	CGCG	5 cut(s)	103, 221, 288, 398, 525
BspHI	TCATGA	1 cut(s)	58
BspLI	GGNNCC	5 cut(s)	72, 601, 770, 803, 952
BspPI	GGATC	5 cut(s)	365, 620, 803, 978, 1075
BspT107I	GGYRCC	1 cut(s)	950
BsrFI	RCCGGY	1 cut(s)	214
BssAI	RCCGGY	1 cut(s)	214
BssECI	CCNNGG	1 cut(s)	228
BssMI	GATC	9 cut(s)	175, 357, 612, 629, 795, 825, 923, 970, 1067
BssSI	CACGAG	1 cut(s)	591
Bst2BI	CACGAG	1 cut(s)	591
Bst2UI	CCWGG	4 cut(s)	134, 230, 464, 731
Bst6I	CTCTTC	1 cut(s)	881
BstC8I	GCNNGC	2 cut(s)	202, 317
BstDEI	CTNAG	9 cut(s)	45, 75, 119, 473, 489, 657, 690, 966, 985
BstF5I	GGATG	3 cut(s)	43, 93, 907
BstFNI	CGCG	5 cut(s)	103, 221, 288, 398, 525
BstKTI	GATC	9 cut(s)	178, 360, 615, 632, 798, 828, 926, 973, 1070
BstMAI	GTCTC	1 cut(s)	80
BstMBI	GATC	9 cut(s)	175, 357, 612, 629, 795, 825, 923, 970, 1067
BstMCI	CGRYCG	1 cut(s)	219
BstMWI	GCNNNNNNNGC	5 cut(s)	224, 491, 512, 558, 1016
BstNI	CCWGG	4 cut(s)	134, 230, 464, 731
BstSCI	CCNGG	4 cut(s)	132, 228, 462, 729
BstSFI	CTRYAG	2 cut(s)	405, 777
BstSLI	GKGCMC	2 cut(s)	747, 915
BstUI	CGCG	5 cut(s)	103, 221, 288, 398, 525
BstV1I	GCAGC	3 cut(s)	166, 424, 499
BstV2I	GAAGAC	1 cut(s)	1145
BstX2I	RGATCY	3 cut(s)	612, 795, 1067
BstYI	RGATCY	3 cut(s)	612, 795, 1067
BstZI	CGGCCG	1 cut(s)	216
Bsu36I	CCTNAGG	3 cut(s)	75, 119, 966
BsuRI	GGCC	9 cut(s)	200, 218, 456, 467, 485, 494, 561, 684, 734
BtsCI	GGATG	3 cut(s)	43, 93, 907
BtuMI	TCGCGA	1 cut(s)	103
Cac8I	GCNNGC	2 cut(s)	202, 317
CciI	TCATGA	1 cut(s)	58
Cfr10I	RCCGGY	1 cut(s)	214
Csp6I	GTAC	2 cut(s)	817, 951
CviAII	CATG	9 cut(s)	59, 556, 623, 908, 916, 1078, 1108, 1112, 1135
CviQI	GTAC	2 cut(s)	817, 951
DdeI	CTNAG	9 cut(s)	45, 75, 119, 473, 489, 657, 690, 966, 985
DpnI	GATC	9 cut(s)	177, 359, 614, 631, 797, 827, 925, 972, 1069
DpnII	GATC	9 cut(s)	175, 357, 612, 629, 795, 825, 923, 970, 1067
DraI	TTTAAA	1 cut(s)	297
EaeI	YGGCCR	2 cut(s)	216, 682
EagI	CGGCCG	1 cut(s)	216
Eam1104I	CTCTTC	1 cut(s)	881
EarI	CTCTTC	1 cut(s)	881
EclXI	CGGCCG	1 cut(s)	216
Eco24I	GRGCYC	2 cut(s)	602, 871
Eco47I	GGWCC	6 cut(s)	71, 339, 364, 727, 768, 891
Eco52I	CGGCCG	1 cut(s)	216
Eco57I	CTGAAG	3 cut(s)	465, 557, 999
Eco81I	CCTNAGG	3 cut(s)	75, 119, 966
Eco88I	CYCGRG	3 cut(s)	243, 267, 870
EcoO109I	RGGNCCY	2 cut(s)	71, 364
EcoRII	CCWGG	4 cut(s)	132, 228, 462, 729
EcoT22I	ATGCAT	1 cut(s)	1113
EcoT38I	GRGCYC	2 cut(s)	602, 871
FaeI	CATG	9 cut(s)	62, 559, 626, 911, 919, 1081, 1111, 1115, 1138
FaqI	GGGAC	1 cut(s)	754
FatI	CATG	9 cut(s)	58, 555, 622, 907, 915, 1077, 1107, 1111, 1134
FauI	CCCGC	2 cut(s)	209, 312
Fnu4HI	GCNGC	5 cut(s)	155, 219, 438, 457, 513
FokI	GGATG	3 cut(s)	50, 80, 914
FriOI	GRGCYC	2 cut(s)	602, 871
Fsp4HI	GCNGC	5 cut(s)	155, 219, 438, 457, 513
FspBI	CTAG	1 cut(s)	501
GluI	GCNGC	5 cut(s)	155, 219, 438, 457, 513
GsaI	CCCAGC	1 cut(s)	154
GsuI	CTGGAG	2 cut(s)	733, 788
HaeIII	GGCC	9 cut(s)	200, 218, 456, 467, 485, 494, 561, 684, 734
HapII	CCGG	2 cut(s)	215, 618
Hin1II	CATG	9 cut(s)	62, 559, 626, 911, 919, 1081, 1111, 1115, 1138
HincII	GTYRAC	1 cut(s)	212
HindII	GTYRAC	1 cut(s)	212
HinfI	GANTC	4 cut(s)	105, 517, 787, 989
HpaII	CCGG	2 cut(s)	215, 618
HphI	GGTGA	3 cut(s)	206, 950, 1127
Hpy166II	GTNNAC	3 cut(s)	212, 859, 894
Hpy188I	TCNGA	8 cut(s)	343, 357, 445, 476, 576, 691, 792, 1150
Hpy8I	GTNNAC	3 cut(s)	212, 859, 894
HpyAV	CCTTC	4 cut(s)	36, 133, 751, 1103
HpyCH4IV	ACGT	2 cut(s)	208, 840
HpyCH4V	TGCA	3 cut(s)	919, 998, 1111
HpyF10VI	GCNNNNNNNGC	5 cut(s)	224, 491, 512, 558, 1016
HpyF3I	CTNAG	9 cut(s)	45, 75, 119, 473, 489, 657, 690, 966, 985
HpySE526I	ACGT	2 cut(s)	208, 840
Hsp92II	CATG	9 cut(s)	62, 559, 626, 911, 919, 1081, 1111, 1115, 1138
KpnI	GGTACC	1 cut(s)	954
Kzo9I	GATC	9 cut(s)	175, 357, 612, 629, 795, 825, 923, 970, 1067
LmnI	GCTCC	2 cut(s)	605, 807
Lsp1109I	GCAGC	3 cut(s)	166, 424, 499
LweI	GCATC	1 cut(s)	1007
MaeI	CTAG	1 cut(s)	501
MaeII	ACGT	2 cut(s)	208, 840
MaeIII	GTNAC	2 cut(s)	16, 1130
MalI	GATC	9 cut(s)	177, 359, 614, 631, 797, 827, 925, 972, 1069
MboI	GATC	9 cut(s)	175, 357, 612, 629, 795, 825, 923, 970, 1067
MboII	GAAGA	8 cut(s)	422, 458, 713, 895, 898, 984, 1005, 1150
MfeI	CAATTG	1 cut(s)	955
MflI	RGATCY	3 cut(s)	612, 795, 1067
MhlI	GDGCHC	4 cut(s)	602, 747, 871, 915
MluCI	AATT	4 cut(s)	158, 545, 955, 1051
MlyI	GAGTC	1 cut(s)	114
MmeI	TCCRAC	1 cut(s)	366
Mph1103I	ATGCAT	1 cut(s)	1113
MroXI	GAANNNNTTC	1 cut(s)	1092
MseI	TTAA	3 cut(s)	296, 981, 1035
MspA1I	CMGCKG	2 cut(s)	808, 1019
MspI	CCGG	2 cut(s)	215, 618
MspR9I	CCNGG	4 cut(s)	134, 230, 464, 731
MunI	CAATTG	1 cut(s)	955
MvaI	CCWGG	4 cut(s)	134, 230, 464, 731
MvnI	CGCG	5 cut(s)	103, 221, 288, 398, 525
MwoI	GCNNNNNNNGC	5 cut(s)	224, 491, 512, 558, 1016
NdeII	GATC	9 cut(s)	175, 357, 612, 629, 795, 825, 923, 970, 1067
NlaIII	CATG	9 cut(s)	62, 559, 626, 911, 919, 1081, 1111, 1115, 1138
NlaIV	GGNNCC	5 cut(s)	72, 601, 770, 803, 952
NruI	TCGCGA	1 cut(s)	103
NsiI	ATGCAT	1 cut(s)	1113
PaeR7I	CTCGAG	2 cut(s)	243, 267
PagI	TCATGA	1 cut(s)	58
PcsI	WCGNNNNNNNCGW	1 cut(s)	825
PdmI	GAANNNNTTC	1 cut(s)	1092
PfeI	GAWTC	3 cut(s)	517, 787, 989
PkrI	GCNGC	5 cut(s)	156, 220, 439, 458, 514
PleI	GAGTC	1 cut(s)	113
PpsI	GAGTC	1 cut(s)	113
PpuMI	RGGWCCY	2 cut(s)	71, 364
Psp5II	RGGWCCY	2 cut(s)	71, 364
Psp6I	CCWGG	4 cut(s)	132, 228, 462, 729
PspFI	CCCAGC	1 cut(s)	150
PspGI	CCWGG	4 cut(s)	132, 228, 462, 729
PspN4I	GGNNCC	5 cut(s)	72, 601, 770, 803, 952
PspPPI	RGGWCCY	2 cut(s)	71, 364
PsuI	RGATCY	3 cut(s)	612, 795, 1067
PvuII	CAGCTG	2 cut(s)	808, 1019
RruI	TCGCGA	1 cut(s)	103
RsaI	GTAC	2 cut(s)	818, 952
RsaNI	GTAC	2 cut(s)	817, 951
SaqAI	TTAA	3 cut(s)	296, 981, 1035
SatI	GCNGC	5 cut(s)	155, 219, 438, 457, 513
Sau3AI	GATC	9 cut(s)	175, 357, 612, 629, 795, 825, 923, 970, 1067
SchI	GAGTC	1 cut(s)	114
ScrFI	CCNGG	4 cut(s)	134, 230, 464, 731
SduI	GDGCHC	4 cut(s)	602, 747, 871, 915
SfaNI	GCATC	1 cut(s)	1007
SfcI	CTRYAG	2 cut(s)	405, 777
SfiI	GGCCNNNNNGGCC	1 cut(s)	491
Sfr274I	CTCGAG	2 cut(s)	243, 267
SinI	GGWCC	6 cut(s)	71, 339, 364, 727, 768, 891
SlaI	CTCGAG	2 cut(s)	243, 267
SmlI	CTYRAG	2 cut(s)	243, 267
SmoI	CTYRAG	2 cut(s)	243, 267
Sse9I	AATT	4 cut(s)	158, 545, 955, 1051
SsiI	CCGC	8 cut(s)	202, 219, 288, 313, 319, 457, 523, 880
SspMI	CTAG	1 cut(s)	501
StyD4I	CCNGG	4 cut(s)	132, 228, 462, 729
TaiI	ACGT	2 cut(s)	211, 843
TaqI	TCGA	5 cut(s)	244, 268, 360, 423, 828
TasI	AATT	4 cut(s)	158, 545, 955, 1051
TauI	GCSGC	2 cut(s)	221, 459
TfiI	GAWTC	3 cut(s)	517, 787, 989
Tru1I	TTAA	3 cut(s)	296, 981, 1035
Tru9I	TTAA	3 cut(s)	296, 981, 1035
TseI	GCWGC	3 cut(s)	154, 437, 512
TspDTI	ATGAA	9 cut(s)	47, 75, 201, 441, 544, 686, 896, 1088, 1151
VpaK11BI	GGWCC	6 cut(s)	71, 339, 364, 727, 768, 891
XhoI	CTCGAG	2 cut(s)	243, 267
XmnI	GAANNNNTTC	1 cut(s)	1092
XspI	CTAG	1 cut(s)	501
Zsp2I	ATGCAT	1 cut(s)	1113

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.