Rmu_sc0001793.1_g000013

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001793.1
OG0000214
Physical Location & Seq
Forward (+)
46419 .. 48950
2532 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001793.1_g000013.1.cds

Sequence Viewer

Length: 2223 bp
atgcacccatttgataccgacattagtggtcccttctggattcttgccttttggctgcagatttatttccctcacttccgtcgcgatgatattccaaaggaacctctagtcgattcccttttggggaaatggctttgccgcaatgtaaggtatcaagctcctccctactccgagtgttttatttacttgtacttgctgggagagatgccagacccaaaaatagtcctttctaggcgtttccctcctccccttgacgatggctttctacccaatggacgggatcatagcgaaagagccctcctggcctttcgtcgcgccatctcctgcttggatattcgtcttgccaccgactgcgtaagttatgagctctctgcccctaaccacttcgctcgccaatttgggttggcccagttggtaccctggcctctggttgattctgccaattattacacctcttggtggagattagccccccctgggtctgccccctttcagagtcagtttactttgatagtgattcccccttgggtcagagcgctataccccctcaacgatgtcaatgacgactatgctgattggtggaaagaagtgtcagtgaactgttgggacctgccacatgatgaactcttcgtcctgatctttcgtggcatgagtagccctggtccggaggaccgcgagattcttgagcgcttctccaaacctgcagaacaaccccagcgatctattctaccttctcgctcattgcgtctagggatacaaatccacgagcctagggcaacacaaactacccggagcaggacagcctctgttcaggccgggaaacaaaaggcaatagcagacgagacttctgagggagggtcttcgcatgatgaagatcctgctgaggccactgctgtatttgcttgcaaacgcgatcgagctcaattcgtcgaagagaattttgaagatgatgaccctctgggaatgcgactggtccgtcaaaggaccactgatccctctcacctgagcgaggctggaccctcagccactgcagaagagctaattatctcgctagttcaagcatcaactaaccctgtggcacctctcccatctccgactacagagcatctgcaaggtcctaccattctaataacgatctctgatgacgactcctcggaggatgaaagcgtggaaagccactctgagacttctgccgcttatgaggaactgatgacgacagagattctcgcagcactagaggttcaagaggtgaatgaggcggggcctcttcctcttggtgaccacgtaccagatatccacccgacagctcgagaggattctgtttgtaccgaggaggtggctgcaaatcctgctggtcttattgacgggacagtcgccccagagatggaaaatgatactaacggtggtggtgccccccaagtctggcaaacaaatgagacaaccgtcgaagctgagggctctgtgcttgaatctgctccacttacccatggtgagccgcgagttgagtttccagattcccctgaggctgaagggacagaccaacctattgaagatgaagaaactgaggaagctggccatccttttgcattggtggttcgtgatcctatatcacctctgccgcctcctcctcctaccagatttgagagattgatgagggtgttggaggtaactcctccttctgctgtggatgaggctaaaatggtgcttcacgaacatctgggtcctcatgtattggagactgacattctcccgcaagtcttagaagccctaaggtatctttgccaggagaaggtattgaccctgcagcaatttagtgctattaatgatctgttgaatgaacttgatatggcccgccgacgtcaatccgccgcgaacacccaggctggggatgctcaagagactttgaatagtctttcccaagaaatggacatcccccgcggtattttaaatgagcgagccatccgcctgcgggaactacaaatccaaaggtccgacttcaaacttcaaattgaggacctccaagcccatttagcctttgttgagaatgcgattgttgcagaagaagctcaactcgatgagcctttggctgcttctgaagaaatgggccgcaacctggcccatatcagagatcgggccactgaggatgaagctggtgctattgaggcgaaacgccacgtggaggaactttgtttgaaattgagctttacaggccaatctttgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

740

Amino Acids

82.56

Weight (kDa)

4.53

Isoelectric Point (pI)

58.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000214)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0079611
rosa_multiflora Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha Rh3DG208400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 975, 1370
AatII GACGTC 1 cut(s) 1861
Acc36I ACCTGC 2 cut(s) 618, 709
Acc65I GGTACC 1 cut(s) 415
AccB1I GGYRCC 3 cut(s) 415, 1078, 1409
AccB7I CCANNNNNTGG 1 cut(s) 1924
AccII CGCG 7 cut(s) 84, 315, 675, 912, 1498, 1871, 1938
AccIII TCCGGA 1 cut(s) 664
AclWI GGATC 4 cut(s) 288, 869, 986, 1595
AcoI YGGCCR 1 cut(s) 1573
AcsI RAATTY 1 cut(s) 937
AcuI CTGAAG 2 cut(s) 1548, 2115
AcvI CACGTG 1 cut(s) 2176
AcyI GRCGYC 1 cut(s) 1858
AfaI GTAC 4 cut(s) 191, 417, 1287, 1327
AfeI AGCGCT 2 cut(s) 537, 689
AjnI CCWGG 7 cut(s) 300, 419, 475, 658, 1782, 1878, 2112
AloI GAACNNNNNNTCC 4 cut(s) 615, 647, 1965, 1997
Alw21I GWGCWC 2 cut(s) 369, 922
Alw26I GTCTC 5 cut(s) 836, 1178, 1430, 1730, 1892
AlwI GGATC 4 cut(s) 288, 869, 986, 1595
AlwNI CAGNNNCTG 2 cut(s) 806, 1028
Ama87I CYCGRG 1 cut(s) 1308
Aor13HI TCCGGA 1 cut(s) 664
Aor51HI AGCGCT 2 cut(s) 537, 689
ApeKI GCWGC 5 cut(s) 55, 1229, 1340, 1804, 2087
ApoI RAATTY 1 cut(s) 937
AseI ATTAAT 1 cut(s) 1821
Asp718I GGTACC 1 cut(s) 415
AspA2I CCTAGG 1 cut(s) 770
AspLEI GCGC 3 cut(s) 317, 538, 690
AsuC2I CCSGG 2 cut(s) 790, 817
AsuHPI GGTGA 5 cut(s) 992, 1261, 1289, 1502, 1602
AvaI CYCGRG 1 cut(s) 1308
AvrII CCTAGG 1 cut(s) 770
AxyI CCTNAGG 2 cut(s) 1521, 1769
BaeGI GKGCMC 1 cut(s) 1414
BalI TGGCCA 1 cut(s) 1575
BanI GGYRCC 3 cut(s) 415, 1078, 1409
BanII GRGCYC 4 cut(s) 298, 369, 922, 1460
BauI CACGAG 1 cut(s) 764
BbrPI CACGTG 1 cut(s) 2176
BbsI GAAGAC 1 cut(s) 852
Bbv12I GWGCWC 2 cut(s) 369, 922
BbvCI CCTCAGC 3 cut(s) 882, 1021, 1452
BbvI GCAGC 5 cut(s) 42, 1241, 1327, 1816, 2074
BccI CCATC 6 cut(s) 251, 326, 1096, 1378, 1584, 1967
BciT130I CCWGG 7 cut(s) 302, 421, 477, 660, 1784, 1880, 2114
BciVI GTATCC 1 cut(s) 747
BcnI CCSGG 2 cut(s) 790, 817
BcoDI GTCTC 5 cut(s) 836, 1178, 1430, 1730, 1892
BfaI CTAG 6 cut(s) 107, 231, 749, 771, 1052, 1235
BfmI CTRYAG 5 cut(s) 56, 702, 1029, 1098, 1802
BfoI RGCGCY 2 cut(s) 539, 691
BfuAI ACCTGC 2 cut(s) 618, 709
BfuI GTATCC 1 cut(s) 747
BglI GCCNNNNNGGC 1 cut(s) 302
BlnI CCTAGG 1 cut(s) 770
Bme1390I CCNGG 9 cut(s) 302, 421, 477, 660, 790, 817, 1784, 1880, 2114
BmeT110I CYCGRG 1 cut(s) 1308
BmiI GGNNCC 9 cut(s) 31, 102, 417, 608, 1018, 1080, 1263, 1411, 1722
BmrFI CCNGG 9 cut(s) 302, 421, 477, 660, 790, 817, 1784, 1880, 2114
BmrI ACTGGG 1 cut(s) 403
BmsI GCATC 4 cut(s) 195, 1070, 1114, 1879
BmuI ACTGGG 1 cut(s) 403
BoxI GACNNNNGTC 1 cut(s) 1442
BpiI GAAGAC 1 cut(s) 852
BplI GAGNNNNNCTC 2 cut(s) 677, 709
Bpu10I CCTNAGC 4 cut(s) 882, 1004, 1021, 1452
BpuEI CTTGAG 2 cut(s) 704, 1878
BpuMI CCSGG 2 cut(s) 790, 817
BsaAI YACGTR 2 cut(s) 1285, 2176
BsaBI GATNNNNATC 2 cut(s) 758, 873
BsaHI GRCGYC 1 cut(s) 1858
BsaWI WCCGGW 1 cut(s) 664
Bse1I ACTGG 2 cut(s) 409, 975
Bse21I CCTNAGG 2 cut(s) 1521, 1769
Bse3DI GCAATG 2 cut(s) 148, 740
Bse8I GATNNNNATC 2 cut(s) 758, 873
BseAI TCCGGA 1 cut(s) 664
BseBI CCWGG 7 cut(s) 302, 421, 477, 660, 1784, 1880, 2114
BseGI GGATG 7 cut(s) 1165, 1576, 1693, 1894, 1929, 1959, 2149
BseJI GATNNNNATC 2 cut(s) 758, 873
BseMI GCAATG 2 cut(s) 148, 740
BseMII CTCAG 9 cut(s) 840, 873, 995, 1035, 1173, 1443, 1512, 1554, 2130
BseNI ACTGG 2 cut(s) 409, 975
BseRI GAGGAG 7 cut(s) 150, 234, 1141, 1346, 1614, 1617, 1662
BseSI GKGCMC 1 cut(s) 1414
BseXI GCAGC 5 cut(s) 42, 1241, 1327, 1816, 2074
BseYI CCCAGC 3 cut(s) 196, 714, 1883
Bsh1236I CGCG 7 cut(s) 84, 315, 675, 912, 1498, 1871, 1938
Bsh1285I CGRYCG 1 cut(s) 916
BshNI GGYRCC 3 cut(s) 415, 1078, 1409
BsiEI CGRYCG 1 cut(s) 916
BsiHKAI GWGCWC 2 cut(s) 369, 922
BsiHKCI CYCGRG 1 cut(s) 1308
BsiSI CCGG 3 cut(s) 665, 790, 816
BslFI GGGAC 4 cut(s) 15, 620, 1381, 1546
BsmAI GTCTC 5 cut(s) 836, 1178, 1430, 1730, 1892
BsmFI GGGAC 4 cut(s) 15, 620, 1381, 1546
BsmI GAATGC 2 cut(s) 969, 2050
BsoBI CYCGRG 1 cut(s) 1308
Bsp1286I GDGCHC 5 cut(s) 298, 369, 922, 1414, 1460
Bsp13I TCCGGA 1 cut(s) 664
Bsp19I CCATGG 1 cut(s) 1486
Bsp68I TCGCGA 1 cut(s) 84
BspCNI CTCAG 9 cut(s) 841, 874, 996, 1034, 1174, 1444, 1513, 1555, 2131
BspEI TCCGGA 1 cut(s) 664
BspFNI CGCG 7 cut(s) 84, 315, 675, 912, 1498, 1871, 1938
BspLI GGNNCC 9 cut(s) 31, 102, 417, 608, 1018, 1080, 1263, 1411, 1722
BspMAI CTGCAG 4 cut(s) 60, 706, 1033, 1806
BspMI ACCTGC 2 cut(s) 618, 709
BspPI GGATC 4 cut(s) 288, 869, 986, 1595
BspQI GCTCTTC 1 cut(s) 1029
BspT107I GGYRCC 3 cut(s) 415, 1078, 1409
BsrDI GCAATG 2 cut(s) 148, 740
BsrI ACTGG 2 cut(s) 409, 975
BssNI GRCGYC 1 cut(s) 1858
BssSI CACGAG 1 cut(s) 764
BssT1I CCWWGG 3 cut(s) 524, 770, 1486
Bst2BI CACGAG 1 cut(s) 764
Bst2UI CCWGG 7 cut(s) 302, 421, 477, 660, 1784, 1880, 2114
Bst4CI ACNGT 4 cut(s) 602, 1372, 1403, 1444
Bst6I CTCTTC 4 cut(s) 632, 927, 1029, 1272
BstACI GRCGYC 1 cut(s) 1858
BstAPI GCANNNNNTGC 1 cut(s) 1349
BstBAI YACGTR 2 cut(s) 1285, 2176
BstC8I GCNNGC 6 cut(s) 391, 904, 1573, 1852, 1956, 1967
BstDSI CCRYGG 2 cut(s) 1486, 1936
BstEII GGTNACC 1 cut(s) 1277
BstENI CCTNNNNNAGG 1 cut(s) 1007
BstF5I GGATG 7 cut(s) 1165, 1576, 1693, 1894, 1929, 1959, 2149
BstFNI CGCG 7 cut(s) 84, 315, 675, 912, 1498, 1871, 1938
BstH2I RGCGCY 2 cut(s) 539, 691
BstHHI GCGC 3 cut(s) 317, 538, 690
BstMAI GTCTC 5 cut(s) 836, 1178, 1430, 1730, 1892
BstMCI CGRYCG 1 cut(s) 916
BstNI CCWGG 7 cut(s) 302, 421, 477, 660, 1784, 1880, 2114
BstPAI GACNNNNGTC 1 cut(s) 1442
BstPI GGTNACC 1 cut(s) 1277
BstSCI CCNGG 9 cut(s) 300, 419, 475, 658, 788, 815, 1782, 1878, 2112
BstSFI CTRYAG 5 cut(s) 56, 702, 1029, 1098, 1802
BstSLI GKGCMC 1 cut(s) 1414
BstUI CGCG 7 cut(s) 84, 315, 675, 912, 1498, 1871, 1938
BstV1I GCAGC 5 cut(s) 42, 1241, 1327, 1816, 2074
BstV2I GAAGAC 1 cut(s) 852
BstX2I RGATCY 1 cut(s) 874
BstYI RGATCY 1 cut(s) 874
Bsu36I CCTNAGG 2 cut(s) 1521, 1769
BsuI GTATCC 1 cut(s) 747
BtgI CCRYGG 2 cut(s) 1486, 1936
BtgZI GCGATG 1 cut(s) 99
BtsCI GGATG 7 cut(s) 1165, 1576, 1693, 1894, 1929, 1959, 2149
BtsI GCAGTG 2 cut(s) 888, 1026
BtsIMutI CAGTG 5 cut(s) 600, 888, 987, 1026, 2136
BtuMI TCGCGA 1 cut(s) 84
BveI ACCTGC 2 cut(s) 618, 709
Cac8I GCNNGC 6 cut(s) 391, 904, 1573, 1852, 1956, 1967
CaiI CAGNNNCTG 2 cut(s) 806, 1028
CfoI GCGC 3 cut(s) 317, 538, 690
Cfr42I CCGCGG 1 cut(s) 1939
CseI GACGC 1 cut(s) 734
Csp6I GTAC 4 cut(s) 190, 416, 1286, 1326
CviAII CATG 5 cut(s) 617, 649, 866, 1487, 1727
CviQI GTAC 4 cut(s) 190, 416, 1286, 1326
DraI TTTAAA 1 cut(s) 1947
DrdI GACNNNNNNGTC 2 cut(s) 975, 1370
DseDI GACNNNNNNGTC 2 cut(s) 975, 1370
EaeI YGGCCR 1 cut(s) 1573
Eam1104I CTCTTC 4 cut(s) 632, 927, 1029, 1272
EarI CTCTTC 4 cut(s) 632, 927, 1029, 1272
EciI GGCGGA 2 cut(s) 1855, 1952
Ecl136II GAGCTC 2 cut(s) 367, 920
Eco130I CCWWGG 3 cut(s) 524, 770, 1486
Eco24I GRGCYC 4 cut(s) 298, 369, 922, 1460
Eco32I GATATC 1 cut(s) 1294
Eco47III AGCGCT 2 cut(s) 537, 689
Eco53kI GAGCTC 2 cut(s) 367, 920
Eco57I CTGAAG 2 cut(s) 1548, 2115
Eco72I CACGTG 1 cut(s) 2176
Eco81I CCTNAGG 2 cut(s) 1521, 1769
Eco88I CYCGRG 1 cut(s) 1308
Eco91I GGTNACC 1 cut(s) 1277
EcoICRI GAGCTC 2 cut(s) 367, 920
EcoNI CCTNNNNNAGG 1 cut(s) 1007
EcoO109I RGGNCCY 5 cut(s) 607, 1115, 1262, 1721, 2014
EcoO65I GGTNACC 1 cut(s) 1277
EcoRII CCWGG 7 cut(s) 300, 419, 475, 658, 1782, 1878, 2112
EcoRV GATATC 1 cut(s) 1294
EcoT14I CCWWGG 3 cut(s) 524, 770, 1486
EcoT38I GRGCYC 4 cut(s) 298, 369, 922, 1460
ErhI CCWWGG 3 cut(s) 524, 770, 1486
FaeI CATG 5 cut(s) 620, 652, 869, 1490, 1730
FaqI GGGAC 4 cut(s) 15, 620, 1381, 1546
FatI CATG 5 cut(s) 616, 648, 865, 1486, 1726
FauI CCCGC 5 cut(s) 1252, 1758, 1859, 1943, 1962
FokI GGATG 7 cut(s) 1172, 1563, 1700, 1901, 1916, 1946, 2156
FriOI GRGCYC 4 cut(s) 298, 369, 922, 1460
FspBI CTAG 6 cut(s) 107, 231, 749, 771, 1052, 1235
GlaI GCGC 3 cut(s) 316, 537, 689
GsaI CCCAGC 3 cut(s) 200, 718, 1887
HaeII RGCGCY 2 cut(s) 539, 691
HapII CCGG 3 cut(s) 665, 790, 816
HgaI GACGC 1 cut(s) 734
HhaI GCGC 3 cut(s) 317, 538, 690
Hin1I GRCGYC 1 cut(s) 1858
Hin1II CATG 5 cut(s) 620, 652, 869, 1490, 1730
Hin6I GCGC 3 cut(s) 315, 536, 688
HinP1I GCGC 3 cut(s) 315, 536, 688
HpaII CCGG 3 cut(s) 665, 790, 816
HphI GGTGA 5 cut(s) 992, 1261, 1289, 1502, 1602
Hpy166II GTNNAC 2 cut(s) 504, 598
Hpy8I GTNNAC 2 cut(s) 504, 598
Hpy99I CGWCG 5 cut(s) 84, 315, 932, 1448, 1860
HpyAV CCTTC 5 cut(s) 43, 741, 1523, 1686, 1783
HpyCH4III ACNGT 4 cut(s) 602, 1372, 1403, 1444
HpyCH4IV ACGT 3 cut(s) 1284, 1858, 2175
HpySE526I ACGT 3 cut(s) 1284, 1858, 2175
Hsp92I GRCGYC 1 cut(s) 1858
Hsp92II CATG 5 cut(s) 620, 652, 869, 1490, 1730
HspAI GCGC 3 cut(s) 315, 536, 688
Kpn2I TCCGGA 1 cut(s) 664
KpnI GGTACC 1 cut(s) 419
KspI CCGCGG 1 cut(s) 1939
LguI GCTCTTC 1 cut(s) 1029
LmnI GCTCC 3 cut(s) 163, 792, 1480
Lsp1109I GCAGC 5 cut(s) 42, 1241, 1327, 1816, 2074
LweI GCATC 4 cut(s) 195, 1070, 1114, 1879
MaeI CTAG 6 cut(s) 107, 231, 749, 771, 1052, 1235
MaeII ACGT 3 cut(s) 1284, 1858, 2175
MaeIII GTNAC 2 cut(s) 1277, 1666
MflI RGATCY 1 cut(s) 874
MhlI GDGCHC 5 cut(s) 298, 369, 922, 1414, 1460
MlsI TGGCCA 1 cut(s) 1575
MluCI AATT 8 cut(s) 395, 442, 923, 937, 1041, 1808, 2007, 2195
MluNI TGGCCA 1 cut(s) 1575
MlyI GAGTC 2 cut(s) 505, 1142
MmeI TCCRAC 3 cut(s) 1118, 1641, 2016
Mox20I TGGCCA 1 cut(s) 1575
MroI TCCGGA 1 cut(s) 664
MscI TGGCCA 1 cut(s) 1575
MseI TTAA 2 cut(s) 1821, 1946
Msp20I TGGCCA 1 cut(s) 1575
MspA1I CMGCKG 1 cut(s) 1938
MspI CCGG 3 cut(s) 665, 790, 816
MspR9I CCNGG 9 cut(s) 302, 421, 477, 660, 790, 817, 1784, 1880, 2114
Mva1269I GAATGC 2 cut(s) 969, 2050
MvaI CCWGG 7 cut(s) 302, 421, 477, 660, 1784, 1880, 2114
MvnI CGCG 7 cut(s) 84, 315, 675, 912, 1498, 1871, 1938
NciI CCSGG 2 cut(s) 790, 817
NcoI CCATGG 1 cut(s) 1486
NlaIII CATG 5 cut(s) 620, 652, 869, 1490, 1730
NlaIV GGNNCC 9 cut(s) 31, 102, 417, 608, 1018, 1080, 1263, 1411, 1722
NmuCI GTSAC 1 cut(s) 1277
NruI TCGCGA 1 cut(s) 84
PaeR7I CTCGAG 1 cut(s) 1308
PasI CCCWGGG 1 cut(s) 476
PciSI GCTCTTC 1 cut(s) 1029
PcsI WCGNNNNNNNCGW 1 cut(s) 742
PctI GAATGC 2 cut(s) 969, 2050
PfeI GAWTC 9 cut(s) 40, 113, 434, 517, 679, 1222, 1316, 1469, 1514
PflMI CCANNNNNTGG 1 cut(s) 1924
Ple19I CGATCG 1 cut(s) 916
PleI GAGTC 2 cut(s) 504, 1142
PmaCI CACGTG 1 cut(s) 2176
PmlI CACGTG 1 cut(s) 2176
PpsI GAGTC 2 cut(s) 504, 1142
Ppu21I YACGTR 2 cut(s) 1285, 2176
PpuMI RGGWCCY 4 cut(s) 607, 1115, 1721, 2014
PshAI GACNNNNGTC 1 cut(s) 1442
PshBI ATTAAT 1 cut(s) 1821
Psp124BI GAGCTC 2 cut(s) 369, 922
Psp5II RGGWCCY 4 cut(s) 607, 1115, 1721, 2014
Psp6I CCWGG 7 cut(s) 300, 419, 475, 658, 1782, 1878, 2112
PspCI CACGTG 1 cut(s) 2176
PspEI GGTNACC 1 cut(s) 1277
PspFI CCCAGC 3 cut(s) 196, 714, 1883
PspGI CCWGG 7 cut(s) 300, 419, 475, 658, 1782, 1878, 2112
PspN4I GGNNCC 9 cut(s) 31, 102, 417, 608, 1018, 1080, 1263, 1411, 1722
PspPPI RGGWCCY 4 cut(s) 607, 1115, 1721, 2014
PstI CTGCAG 4 cut(s) 60, 706, 1033, 1806
PstNI CAGNNNCTG 2 cut(s) 806, 1028
PsuI RGATCY 1 cut(s) 874
PvuI CGATCG 1 cut(s) 916
RruI TCGCGA 1 cut(s) 84
RsaI GTAC 4 cut(s) 191, 417, 1287, 1327
RsaNI GTAC 4 cut(s) 190, 416, 1286, 1326
SacI GAGCTC 2 cut(s) 369, 922
SacII CCGCGG 1 cut(s) 1939
SapI GCTCTTC 1 cut(s) 1029
SaqAI TTAA 2 cut(s) 1821, 1946
SchI GAGTC 2 cut(s) 505, 1142
ScrFI CCNGG 9 cut(s) 302, 421, 477, 660, 790, 817, 1784, 1880, 2114
SduI GDGCHC 5 cut(s) 298, 369, 922, 1414, 1460
SfaNI GCATC 4 cut(s) 195, 1070, 1114, 1879
SfcI CTRYAG 5 cut(s) 56, 702, 1029, 1098, 1802
Sfr274I CTCGAG 1 cut(s) 1308
Sfr303I CCGCGG 1 cut(s) 1939
SgrBI CCGCGG 1 cut(s) 1939
SlaI CTCGAG 1 cut(s) 1308
SmlI CTYRAG 3 cut(s) 683, 1308, 1893
SmoI CTYRAG 3 cut(s) 683, 1308, 1893
Sse9I AATT 8 cut(s) 395, 442, 923, 937, 1041, 1808, 2007, 2195
SspMI CTAG 6 cut(s) 107, 231, 749, 771, 1052, 1235
SstI GAGCTC 2 cut(s) 369, 922
StyD4I CCNGG 9 cut(s) 300, 419, 475, 658, 788, 815, 1782, 1878, 2112
StyI CCWWGG 3 cut(s) 524, 770, 1486
TaaI ACNGT 4 cut(s) 602, 1372, 1403, 1444
TaiI ACGT 3 cut(s) 1287, 1861, 2178
TaqI TCGA 6 cut(s) 111, 916, 930, 1309, 1446, 2073
TasI AATT 8 cut(s) 395, 442, 923, 937, 1041, 1808, 2007, 2195
TatI WGTACW 1 cut(s) 189
TauI GCSGC 6 cut(s) 141, 1196, 1498, 1621, 1871, 2109
TfiI GAWTC 9 cut(s) 40, 113, 434, 517, 679, 1222, 1316, 1469, 1514
Tru1I TTAA 2 cut(s) 1821, 1946
Tru9I TTAA 2 cut(s) 1821, 1946
TscAI CASTG 5 cut(s) 600, 895, 994, 1033, 2143
TseFI GTSAC 1 cut(s) 1277
TseI GCWGC 5 cut(s) 55, 1229, 1340, 1804, 2087
Tsp45I GTSAC 1 cut(s) 1277
TspDTI ATGAA 6 cut(s) 636, 885, 1176, 1569, 1851, 2160
TspGWI ACGGA 2 cut(s) 68, 965
TspRI CASTG 5 cut(s) 600, 895, 994, 1033, 2143
Van91I CCANNNNNTGG 1 cut(s) 1924
VspI ATTAAT 1 cut(s) 1821
XagI CCTNNNNNAGG 1 cut(s) 1007
XapI RAATTY 1 cut(s) 937
XcmI CCANNNNNNNNNTGG 1 cut(s) 325
XhoI CTCGAG 1 cut(s) 1308
XmaJI CCTAGG 1 cut(s) 770
XspI CTAG 6 cut(s) 107, 231, 749, 771, 1052, 1235
ZraI GACGTC 1 cut(s) 1859
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.