Rmu_sc0002183.1_g000010

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002183.1
OG0000214
Physical Location & Seq
Reverse (-)
41338 .. 43303
1966 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002183.1_g000010.1.cds

Sequence Viewer

Length: 1722 bp
atggcatccaagaaaccattcgttatcgatcaggcaaatgaaatcactgagaaagccgcattcacctggcgaactaacatgagtattcgatgtagaagtcagaccggagaggagagaagtcgactgatgggctttggtggctgtgatagtcaagcgagtctgggtcccacacctcgcgatcgttttccagatgatgctatggcctattatgggcttcccatagcggctcttcggcaggtgcttagtgattttagcagttggggaccaaggaggaaagtgggcttctggcctaccgtcgctcctgaggaaaatgtttggtatcaggagccctgcaccgctagccgccgctctttgcttctggaacacctccagcaatacattcgatttccagtttgggcagatgacataactctgctggatgttcttaccatcacgaggttgcccattgactttgacccctatgtgcatggtcagtttgatggcattcaattttctttgagaatggatatggctggtcgagggcatcacagcaaatcctaccaattctggcgcgactattactgcacccagcgtgaccatacaggaggtatcgtattcctggaattctggctttgcaaatttatcttttgcacttcttccaacaaatctactgggccctggaattctctggccactgctctctacaatggtatttgcgttggccttgggcaacctgtattgggtgcgttatatcgctccctttatagagccgtaatgcgcccatttgataccgacattagtggccccttctggatccttgccttttggctgcagatttatttcactctcttccgtcgtggtgatattccaaaggaacctccagttgattcccttttggggaactggctttgccgcaacgtaaggtatcgagctccaccctactccgagtgttttatttacttgtacttgttgggagagatgtcggacccaaaaatagtcatttgtaggcgattccctcctccccttgatgatggctttctgcctagtggacgggatcatagtgaaagagccctcctagcctttcgtcgcgtcatctcctgcttggatatttgtcttgccatcgatcgcgtaagttacgagctctacacccttacccactttgctcgccaatttgggttggcccagttggtaccctggcctctggttgattctgccaattactacacctcttggcggagattagccccgcctgggtctgccccctttcagagtcagtttactttgatagtgattcccccttgggtcagagcgctataccccatcaacgatgtcgatgatgactatgctgattggtggaaaaaagtgtcagtgaactgttgggacccgccacatgacgaactcttcatcctaatctttcgtggcatgagtagccctggtctggaggaccgcgagattcttgagcgcttctccaaacctgcagcacaaccccggctacatattctaccttctcgctcatcgcgtccagggatacaaatccacaagcctagggaaacacaaactacccggagcaggacaacctctgttcaggctgggaaacaaaaggcaatagcagaggagacttctgagggagagtcttcgcatgatgaagatcccgctgaggccactgctgtctttgcttgcaaacgcgatcgagctcaattcgttgaagagagttttgaagatgacgaacctctgggaatgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

573

Amino Acids

65.8

Weight (kDa)

6.3

Isoelectric Point (pI)

52.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000214)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0079611
rosa_multiflora Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha Rh3DG208400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 226
Acc36I ACCTGC 2 cut(s) 226, 1462
Acc65I GGTACC 1 cut(s) 1168
AccB1I GGYRCC 1 cut(s) 1168
AccBSI CCGCTC 1 cut(s) 348
AccI GTMKAC 1 cut(s) 121
AccII CGCG 7 cut(s) 177, 552, 1068, 1107, 1428, 1498, 1665
AclWI GGATC 4 cut(s) 787, 800, 1041, 1622
AcoI YGGCCR 1 cut(s) 669
AcsI RAATTY 3 cut(s) 602, 617, 661
AfaI GTAC 2 cut(s) 944, 1170
AfeI AGCGCT 2 cut(s) 1290, 1442
AfiI CCNNNNNNNGG 8 cut(s) 210, 435, 719, 876, 1212, 1230, 1417, 1548
AgsI TTSAA 3 cut(s) 488, 1685, 1697
AjnI CCWGG 7 cut(s) 65, 597, 656, 1172, 1228, 1411, 1501
AjuI GAANNNNNNNTTGG 1 cut(s) 34
AloI GAACNNNNNNTCC 2 cut(s) 1368, 1400
AluBI AGCT 3 cut(s) 911, 1120, 1673
AluI AGCT 3 cut(s) 911, 1120, 1673
Alw21I GWGCWC 3 cut(s) 913, 1122, 1675
Alw26I GTCTC 1 cut(s) 1589
AlwI GGATC 4 cut(s) 787, 800, 1041, 1622
Aor51HI AGCGCT 2 cut(s) 1290, 1442
AoxI GGCC 9 cut(s) 201, 287, 653, 669, 700, 781, 1158, 1175, 1638
ApaI GGGCCC 1 cut(s) 657
ApeKI GCWGC 2 cut(s) 808, 1457
ApoI RAATTY 3 cut(s) 602, 617, 661
Asp700I GAANNNNTTC 1 cut(s) 17
Asp718I GGTACC 1 cut(s) 1168
AspA2I CCTAGG 1 cut(s) 1523
AspLEI GCGC 4 cut(s) 552, 759, 1291, 1443
AspS9I GGNCC 9 cut(s) 164, 263, 653, 654, 782, 964, 1159, 1360, 1423
AsuC2I CCSGG 2 cut(s) 1468, 1543
AsuHPI GGTGA 2 cut(s) 55, 851
AsuNHI GCTAGC 1 cut(s) 338
AvaII GGWCC 5 cut(s) 164, 263, 964, 1360, 1423
AvrII CCTAGG 1 cut(s) 1523
AxyI CCTNAGG 1 cut(s) 303
BaeGI GKGCMC 1 cut(s) 657
BalI TGGCCA 1 cut(s) 671
BamHI GGATCC 1 cut(s) 792
BanI GGYRCC 1 cut(s) 1168
BanII GRGCYC 6 cut(s) 330, 657, 913, 1051, 1122, 1675
BauI CACGAG 1 cut(s) 433
BbsI GAAGAC 1 cut(s) 1605
Bbv12I GWGCWC 3 cut(s) 913, 1122, 1675
BbvCI CCTCAGC 1 cut(s) 1635
BbvI GCAGC 2 cut(s) 795, 1469
BccI CCATC 6 cut(s) 121, 437, 473, 1004, 1106, 1307
BceAI ACGGC 1 cut(s) 734
BcgI CGANNNNNNTGC 2 cut(s) 362, 396
BciT130I CCWGG 7 cut(s) 67, 599, 658, 1174, 1230, 1413, 1503
BciVI GTATCC 1 cut(s) 1500
BcnI CCSGG 2 cut(s) 1468, 1543
BcoDI GTCTC 1 cut(s) 1589
BfaI CTAG 4 cut(s) 339, 1023, 1055, 1524
BfmI CTRYAG 2 cut(s) 809, 1455
BfoI RGCGCY 2 cut(s) 1292, 1444
BfuAI ACCTGC 2 cut(s) 226, 1462
BfuI GTATCC 1 cut(s) 1500
BisI GCNGC 7 cut(s) 57, 225, 343, 346, 809, 892, 1458
BlnI CCTAGG 1 cut(s) 1523
BlsI GCNGC 7 cut(s) 58, 226, 344, 347, 810, 893, 1459
Bme1390I CCNGG 9 cut(s) 67, 599, 658, 1174, 1230, 1413, 1468, 1503, 1543
Bme18I GGWCC 5 cut(s) 164, 263, 964, 1360, 1423
BmgT120I GGNCC 9 cut(s) 164, 263, 653, 654, 782, 964, 1159, 1360, 1423
BmrFI CCNGG 9 cut(s) 67, 599, 658, 1174, 1230, 1413, 1468, 1503, 1543
BmrI ACTGGG 2 cut(s) 660, 1156
BmsI GCATC 3 cut(s) 14, 184, 532
BmtI GCTAGC 1 cut(s) 342
BmuI ACTGGG 2 cut(s) 660, 1156
BpiI GAAGAC 1 cut(s) 1605
BplI GAGNNNNNCTC 2 cut(s) 1430, 1462
BpmI CTGGAG 3 cut(s) 353, 843, 1439
Bpu10I CCTNAGC 1 cut(s) 1635
BpuEI CTTGAG 1 cut(s) 1457
BpuMI CCSGG 2 cut(s) 1468, 1543
Bsa29I ATCGAT 2 cut(s) 27, 1101
BsaBI GATNNNNATC 2 cut(s) 1511, 1626
BsaWI WCCGGW 1 cut(s) 104
BsaXI ACNNNNNCTCC 4 cut(s) 283, 313, 576, 606
Bsc4I CCNNNNNNNGG 8 cut(s) 210, 435, 719, 876, 1212, 1230, 1417, 1548
Bse1I ACTGG 5 cut(s) 389, 655, 860, 887, 1162
Bse21I CCTNAGG 1 cut(s) 303
Bse8I GATNNNNATC 2 cut(s) 1511, 1626
BseBI CCWGG 7 cut(s) 67, 599, 658, 1174, 1230, 1413, 1503
BseCI ATCGAT 2 cut(s) 27, 1101
BseGI GGATG 3 cut(s) 5, 424, 1383
BseJI GATNNNNATC 2 cut(s) 1511, 1626
BseLI CCNNNNNNNGG 8 cut(s) 210, 435, 719, 876, 1212, 1230, 1417, 1548
BseMII CTCAG 4 cut(s) 39, 294, 1593, 1626
BseNI ACTGG 5 cut(s) 389, 655, 860, 887, 1162
BseRI GAGGAG 3 cut(s) 125, 987, 1607
BseSI GKGCMC 1 cut(s) 657
BseXI GCAGC 2 cut(s) 795, 1469
BseYI CCCAGC 2 cut(s) 567, 1568
BsgI GTGCAG 2 cut(s) 316, 547
Bsh1236I CGCG 7 cut(s) 177, 552, 1068, 1107, 1428, 1498, 1665
Bsh1285I CGRYCG 3 cut(s) 181, 1105, 1669
BshFI GGCC 9 cut(s) 203, 289, 655, 671, 702, 783, 1160, 1177, 1640
BshNI GGYRCC 1 cut(s) 1168
BshVI ATCGAT 2 cut(s) 27, 1101
BsiEI CGRYCG 3 cut(s) 181, 1105, 1669
BsiHKAI GWGCWC 3 cut(s) 913, 1122, 1675
BsiSI CCGG 3 cut(s) 105, 1468, 1543
BslFI GGGAC 3 cut(s) 150, 276, 1373
BslI CCNNNNNNNGG 8 cut(s) 210, 435, 719, 876, 1212, 1230, 1417, 1548
BsmAI GTCTC 1 cut(s) 1589
BsmFI GGGAC 3 cut(s) 150, 276, 1373
BsmI GAATGC 2 cut(s) 59, 483
BsnI GGCC 9 cut(s) 203, 289, 655, 671, 702, 783, 1160, 1177, 1640
Bsp120I GGGCCC 1 cut(s) 653
Bsp1286I GDGCHC 6 cut(s) 330, 657, 913, 1051, 1122, 1675
Bsp143I GATC 7 cut(s) 28, 178, 792, 1033, 1102, 1627, 1666
Bsp68I TCGCGA 1 cut(s) 177
BspANI GGCC 9 cut(s) 203, 289, 655, 671, 702, 783, 1160, 1177, 1640
BspCNI CTCAG 4 cut(s) 40, 295, 1594, 1627
BspDI ATCGAT 2 cut(s) 27, 1101
BspFNI CGCG 7 cut(s) 177, 552, 1068, 1107, 1428, 1498, 1665
BspMAI CTGCAG 2 cut(s) 813, 1459
BspMI ACCTGC 2 cut(s) 226, 1462
BspOI GCTAGC 1 cut(s) 342
BspPI GGATC 4 cut(s) 787, 800, 1041, 1622
BspQI GCTCTTC 1 cut(s) 234
BspT107I GGYRCC 1 cut(s) 1168
BsrBI CCGCTC 1 cut(s) 348
BsrI ACTGG 5 cut(s) 389, 655, 860, 887, 1162
BssMI GATC 7 cut(s) 28, 178, 792, 1033, 1102, 1627, 1666
BssSI CACGAG 1 cut(s) 433
BssT1I CCWWGG 4 cut(s) 266, 703, 1277, 1523
Bst2BI CACGAG 1 cut(s) 433
Bst2UI CCWGG 7 cut(s) 67, 599, 658, 1174, 1230, 1413, 1503
Bst4CI ACNGT 2 cut(s) 295, 1355
Bst6I CTCTTC 4 cut(s) 234, 833, 1385, 1680
BstC8I GCNNGC 3 cut(s) 340, 1144, 1657
BstDEI CTNAG 5 cut(s) 48, 242, 303, 1602, 1635
BstF5I GGATG 3 cut(s) 5, 424, 1383
BstFNI CGCG 7 cut(s) 177, 552, 1068, 1107, 1428, 1498, 1665
BstH2I RGCGCY 2 cut(s) 1292, 1444
BstHHI GCGC 4 cut(s) 552, 759, 1291, 1443
BstKTI GATC 7 cut(s) 31, 181, 795, 1036, 1105, 1630, 1669
BstMAI GTCTC 1 cut(s) 1589
BstMBI GATC 7 cut(s) 28, 178, 792, 1033, 1102, 1627, 1666
BstMCI CGRYCG 3 cut(s) 181, 1105, 1669
BstMWI GCNNNNNNNGC 5 cut(s) 138, 339, 1055, 1407, 1652
BstNI CCWGG 7 cut(s) 67, 599, 658, 1174, 1230, 1413, 1503
BstSCI CCNGG 9 cut(s) 65, 597, 656, 1172, 1228, 1411, 1466, 1501, 1541
BstSFI CTRYAG 2 cut(s) 809, 1455
BstSLI GKGCMC 1 cut(s) 657
BstUI CGCG 7 cut(s) 177, 552, 1068, 1107, 1428, 1498, 1665
BstV1I GCAGC 2 cut(s) 795, 1469
BstV2I GAAGAC 1 cut(s) 1605
BstX2I RGATCY 2 cut(s) 792, 1627
BstYI RGATCY 2 cut(s) 792, 1627
Bsu15I ATCGAT 2 cut(s) 27, 1101
Bsu36I CCTNAGG 1 cut(s) 303
BsuI GTATCC 1 cut(s) 1500
BsuRI GGCC 9 cut(s) 203, 289, 655, 671, 702, 783, 1160, 1177, 1640
BsuTUI ATCGAT 2 cut(s) 27, 1101
BtgZI GCGATG 1 cut(s) 1479
BtsCI GGATG 3 cut(s) 5, 424, 1383
BtsI GCAGTG 2 cut(s) 672, 1641
BtsIMutI CAGTG 4 cut(s) 45, 672, 1353, 1641
BtuMI TCGCGA 1 cut(s) 177
BveI ACCTGC 2 cut(s) 226, 1462
Cac8I GCNNGC 3 cut(s) 340, 1144, 1657
CfoI GCGC 4 cut(s) 552, 759, 1291, 1443
Cfr13I GGNCC 9 cut(s) 164, 263, 653, 654, 782, 964, 1159, 1360, 1423
ClaI ATCGAT 2 cut(s) 27, 1101
CseI GACGC 2 cut(s) 1057, 1487
Csp6I GTAC 2 cut(s) 943, 1169
CviAII CATG 5 cut(s) 79, 467, 1370, 1402, 1619
CviQI GTAC 2 cut(s) 943, 1169
DdeI CTNAG 5 cut(s) 48, 242, 303, 1602, 1635
DpnI GATC 7 cut(s) 30, 180, 794, 1035, 1104, 1629, 1668
DpnII GATC 7 cut(s) 28, 178, 792, 1033, 1102, 1627, 1666
EaeI YGGCCR 1 cut(s) 669
Eam1104I CTCTTC 4 cut(s) 234, 833, 1385, 1680
EarI CTCTTC 4 cut(s) 234, 833, 1385, 1680
EciI GGCGGA 1 cut(s) 1228
Ecl136II GAGCTC 3 cut(s) 911, 1120, 1673
Eco130I CCWWGG 4 cut(s) 266, 703, 1277, 1523
Eco24I GRGCYC 6 cut(s) 330, 657, 913, 1051, 1122, 1675
Eco47I GGWCC 5 cut(s) 164, 263, 964, 1360, 1423
Eco47III AGCGCT 2 cut(s) 1290, 1442
Eco53kI GAGCTC 3 cut(s) 911, 1120, 1673
Eco81I CCTNAGG 1 cut(s) 303
EcoICRI GAGCTC 3 cut(s) 911, 1120, 1673
EcoO109I RGGNCCY 3 cut(s) 164, 654, 1360
EcoRI GAATTC 2 cut(s) 602, 661
EcoRII CCWGG 7 cut(s) 65, 597, 656, 1172, 1228, 1411, 1501
EcoT14I CCWWGG 4 cut(s) 266, 703, 1277, 1523
EcoT38I GRGCYC 6 cut(s) 330, 657, 913, 1051, 1122, 1675
ErhI CCWWGG 4 cut(s) 266, 703, 1277, 1523
FaeI CATG 5 cut(s) 82, 470, 1373, 1405, 1622
FaqI GGGAC 3 cut(s) 150, 276, 1373
FatI CATG 5 cut(s) 78, 466, 1369, 1401, 1618
FauI CCCGC 3 cut(s) 1233, 1371, 1639
FblI GTMKAC 1 cut(s) 121
Fnu4HI GCNGC 7 cut(s) 57, 225, 343, 346, 809, 892, 1458
FokI GGATG 2 cut(s) 431, 1370
FriOI GRGCYC 6 cut(s) 330, 657, 913, 1051, 1122, 1675
Fsp4HI GCNGC 7 cut(s) 57, 225, 343, 346, 809, 892, 1458
FspBI CTAG 4 cut(s) 339, 1023, 1055, 1524
GlaI GCGC 4 cut(s) 551, 758, 1290, 1442
GluI GCNGC 7 cut(s) 57, 225, 343, 346, 809, 892, 1458
GsaI CCCAGC 2 cut(s) 571, 1572
GsuI CTGGAG 3 cut(s) 353, 843, 1439
HaeII RGCGCY 2 cut(s) 1292, 1444
HaeIII GGCC 9 cut(s) 203, 289, 655, 671, 702, 783, 1160, 1177, 1640
HapII CCGG 3 cut(s) 105, 1468, 1543
HgaI GACGC 2 cut(s) 1057, 1487
HhaI GCGC 4 cut(s) 552, 759, 1291, 1443
Hin1II CATG 5 cut(s) 82, 470, 1373, 1405, 1622
Hin6I GCGC 4 cut(s) 550, 757, 1289, 1441
HinP1I GCGC 4 cut(s) 550, 757, 1289, 1441
HincII GTYRAC 1 cut(s) 122
HindII GTYRAC 1 cut(s) 122
HinfI GANTC 8 cut(s) 157, 866, 990, 1187, 1249, 1270, 1432, 1610
HpaII CCGG 3 cut(s) 105, 1468, 1543
HphI GGTGA 2 cut(s) 55, 851
Hpy166II GTNNAC 4 cut(s) 122, 1028, 1257, 1351
Hpy188I TCNGA 6 cut(s) 102, 925, 964, 1248, 1286, 1603
Hpy188III TCNNGA 9 cut(s) 176, 188, 302, 323, 359, 433, 790, 1418, 1436
Hpy8I GTNNAC 4 cut(s) 122, 1028, 1257, 1351
Hpy99I CGWCG 3 cut(s) 299, 837, 1068
HpyAV CCTTC 2 cut(s) 796, 1494
HpyCH4III ACNGT 2 cut(s) 295, 1355
HpyCH4IV ACGT 1 cut(s) 897
HpyCH4V TGCA 8 cut(s) 333, 466, 564, 615, 630, 811, 1457, 1659
HpyF10VI GCNNNNNNNGC 5 cut(s) 138, 339, 1055, 1407, 1652
HpyF3I CTNAG 5 cut(s) 48, 242, 303, 1602, 1635
HpySE526I ACGT 1 cut(s) 897
Hsp92II CATG 5 cut(s) 82, 470, 1373, 1405, 1622
HspAI GCGC 4 cut(s) 550, 757, 1289, 1441
KflI GGGWCCC 2 cut(s) 164, 1360
KpnI GGTACC 1 cut(s) 1172
Kzo9I GATC 7 cut(s) 28, 178, 792, 1033, 1102, 1627, 1666
LguI GCTCTTC 1 cut(s) 234
LmnI GCTCC 5 cut(s) 304, 325, 740, 916, 1545
Lsp1109I GCAGC 2 cut(s) 795, 1469
LweI GCATC 3 cut(s) 14, 184, 532
MaeI CTAG 4 cut(s) 339, 1023, 1055, 1524
MaeII ACGT 1 cut(s) 897
MaeIII GTNAC 2 cut(s) 572, 1112
MalI GATC 7 cut(s) 30, 180, 794, 1035, 1104, 1629, 1668
MbiI CCGCTC 1 cut(s) 348
MboI GATC 7 cut(s) 28, 178, 792, 1033, 1102, 1627, 1666
MboII GAAGA 8 cut(s) 221, 627, 820, 1372, 1605, 1637, 1697, 1709
MflI RGATCY 2 cut(s) 792, 1627
MhlI GDGCHC 6 cut(s) 330, 657, 913, 1051, 1122, 1675
MlsI TGGCCA 1 cut(s) 671
MluCI AATT 8 cut(s) 488, 542, 602, 617, 661, 1148, 1195, 1676
MluNI TGGCCA 1 cut(s) 671
MlyI GAGTC 3 cut(s) 166, 1258, 1619
MmeI TCCRAC 2 cut(s) 663, 942
Mox20I TGGCCA 1 cut(s) 671
MroXI GAANNNNTTC 1 cut(s) 17
MscI TGGCCA 1 cut(s) 671
Msp20I TGGCCA 1 cut(s) 671
MspA1I CMGCKG 1 cut(s) 1634
MspI CCGG 3 cut(s) 105, 1468, 1543
MspR9I CCNGG 9 cut(s) 67, 599, 658, 1174, 1230, 1413, 1468, 1503, 1543
Mva1269I GAATGC 2 cut(s) 59, 483
MvaI CCWGG 7 cut(s) 67, 599, 658, 1174, 1230, 1413, 1503
MvnI CGCG 7 cut(s) 177, 552, 1068, 1107, 1428, 1498, 1665
MwoI GCNNNNNNNGC 5 cut(s) 138, 339, 1055, 1407, 1652
NciI CCSGG 2 cut(s) 1468, 1543
NdeII GATC 7 cut(s) 28, 178, 792, 1033, 1102, 1627, 1666
NheI GCTAGC 1 cut(s) 338
NlaIII CATG 5 cut(s) 82, 470, 1373, 1405, 1622
NmuCI GTSAC 1 cut(s) 572
NruI TCGCGA 1 cut(s) 177
PaqCI CACCTGC 1 cut(s) 226
PciSI GCTCTTC 1 cut(s) 234
PcsI WCGNNNNNNNCGW 1 cut(s) 1495
PctI GAATGC 2 cut(s) 59, 483
PdmI GAANNNNTTC 1 cut(s) 17
PfeI GAWTC 5 cut(s) 866, 990, 1187, 1270, 1432
PfoI TCCNGGA 1 cut(s) 597
PkrI GCNGC 7 cut(s) 58, 226, 344, 347, 810, 893, 1459
Ple19I CGATCG 3 cut(s) 181, 1105, 1669
PleI GAGTC 3 cut(s) 165, 1257, 1618
PpsI GAGTC 3 cut(s) 165, 1257, 1618
PpuMI RGGWCCY 2 cut(s) 164, 1360
Psp124BI GAGCTC 3 cut(s) 913, 1122, 1675
Psp5II RGGWCCY 2 cut(s) 164, 1360
Psp6I CCWGG 7 cut(s) 65, 597, 656, 1172, 1228, 1411, 1501
PspFI CCCAGC 2 cut(s) 567, 1568
PspGI CCWGG 7 cut(s) 65, 597, 656, 1172, 1228, 1411, 1501
PspOMI GGGCCC 1 cut(s) 653
PspPI GGNCC 9 cut(s) 164, 263, 653, 654, 782, 964, 1159, 1360, 1423
PspPPI RGGWCCY 2 cut(s) 164, 1360
PstI CTGCAG 2 cut(s) 813, 1459
PsuI RGATCY 2 cut(s) 792, 1627
PvuI CGATCG 3 cut(s) 181, 1105, 1669
RruI TCGCGA 1 cut(s) 177
RsaI GTAC 2 cut(s) 944, 1170
RsaNI GTAC 2 cut(s) 943, 1169
SacI GAGCTC 3 cut(s) 913, 1122, 1675
SalI GTCGAC 1 cut(s) 120
SapI GCTCTTC 1 cut(s) 234
SatI GCNGC 7 cut(s) 57, 225, 343, 346, 809, 892, 1458
Sau3AI GATC 7 cut(s) 28, 178, 792, 1033, 1102, 1627, 1666
Sau96I GGNCC 9 cut(s) 164, 263, 653, 654, 782, 964, 1159, 1360, 1423
SchI GAGTC 3 cut(s) 166, 1258, 1619
ScrFI CCNGG 9 cut(s) 67, 599, 658, 1174, 1230, 1413, 1468, 1503, 1543
SduI GDGCHC 6 cut(s) 330, 657, 913, 1051, 1122, 1675
SfaNI GCATC 3 cut(s) 14, 184, 532
SfcI CTRYAG 2 cut(s) 809, 1455
SinI GGWCC 5 cut(s) 164, 263, 964, 1360, 1423
SmlI CTYRAG 1 cut(s) 1436
SmoI CTYRAG 1 cut(s) 1436
Sse9I AATT 8 cut(s) 488, 542, 602, 617, 661, 1148, 1195, 1676
SspMI CTAG 4 cut(s) 339, 1023, 1055, 1524
SstI GAGCTC 3 cut(s) 913, 1122, 1675
StyD4I CCNGG 9 cut(s) 65, 597, 656, 1172, 1228, 1411, 1466, 1501, 1541
StyI CCWWGG 4 cut(s) 266, 703, 1277, 1523
TaaI ACNGT 2 cut(s) 295, 1355
TaiI ACGT 1 cut(s) 900
TaqI TCGA 9 cut(s) 27, 88, 121, 382, 517, 907, 1101, 1311, 1669
TasI AATT 8 cut(s) 488, 542, 602, 617, 661, 1148, 1195, 1676
TatI WGTACW 1 cut(s) 942
TauI GCSGC 5 cut(s) 59, 227, 345, 348, 894
TfiI GAWTC 5 cut(s) 866, 990, 1187, 1270, 1432
TscAI CASTG 4 cut(s) 52, 679, 1353, 1648
TseFI GTSAC 1 cut(s) 572
TseI GCWGC 2 cut(s) 808, 1457
Tsp45I GTSAC 1 cut(s) 572
TspDTI ATGAA 3 cut(s) 54, 1372, 1638
TspGWI ACGGA 1 cut(s) 821
TspRI CASTG 4 cut(s) 52, 679, 1353, 1648
VpaK11BI GGWCC 5 cut(s) 164, 263, 964, 1360, 1423
XapI RAATTY 3 cut(s) 602, 617, 661
XmaJI CCTAGG 1 cut(s) 1523
XmiI GTMKAC 1 cut(s) 121
XmnI GAANNNNTTC 1 cut(s) 17
XspI CTAG 4 cut(s) 339, 1023, 1055, 1524
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.