Rmu_sc0000962.1_g000024

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000962.1
OG0000214
Physical Location & Seq
Reverse (-)
74759 .. 77888
3130 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000962.1_g000024.1.cds

Sequence Viewer

Length: 2253 bp
atggcatccaagaaaccattcgttattgatcaggcagaagaaatcactgagaaagccgcattcacctggcggactaacatgagtgttcgatgtagaagtcagaccggagaggagagaagtcgactgatgggctttggtggcggcgaaagtcaagcgagtctgggtcccacacctcgcgatcgtttgccagatgatgttatggcctattatgggcttcccatctgccgtcccatcccggctcttctccggtctcctgccgatcttggaggttgggaccagaaacatcatagagtcaaaattggtttttggccctcaatccaacctcctgatgtagcctggtacaatgaggttcgtgcccgatatttggcctgctggcgtacagtaggcattgcggatgctattgacttgtgtcttcaaattcccggcggccttaatcgcgctcctctcgccgcggccttttgtttctggaacaccgccagcaacacttttgatttcctctttgggcagatgagtatttccttattggatattctcgctatcacgggcctacccatccacgcggcaccacatcatgacaaaaccgggggaattgccttccttgagtggtggctctgtaagtgtattttctgtacttctgctggtaaaccaactggcacttggtcctctttggccactgctctttataatggcacagtcgttggccttggtcaaccggttctggggaagaagattcctcgcgatattggcaaatgggtttcttcctcgcccgggtcatcgcgaagaggctataatgatgtttcgtcgcactatttcttgctcaacattcaattggctacggatgaactaagttacgaactttatgcacccaatcacgttgctcgtcaatttgggttggcccagttggtaccctggcctctggttgattctaccaatgactacacctcttggcggagattagctccgcctgggtctgccccctttcagagtcagtttactttgatagtgattcccccttgggtcagagcgctatacccccataacaatgccgatgatgactatgctgattggtggaaagaagtgtctgtcaattgttggaccatgaataaccgtgaccttttcgccatccttttccccgacttggaacatcgctttgccgtggacagtgaaatccttgaacaatattatgatggcgaggctccgcctcctaaggcagtagccgaggagcctcctgagggggagtcctttgatgatgacgatgtgagccttgctgaggtaattgctgctcatactcacaaacatggtcgcgcccaaatcgctgaagaggactttgaggatgacgagcctctatcaatgaggctggtccgtcaaaggaccactgatccctctcgcctgagcgaggctggaccctcagccactgcagaagagccaattctctcactagttcaagcatcaactaaccccgtggcacctcttccatctcccacatctacagagcatctgcaaggtcctaccattctaataacgatctctaatgacgactcctcagaggatgaaagcgtggaaagccactctgagacttctgcctcttatgaggaaccgatgacgacagagattctcgcggcactagagatccaaccccgctctctgacatttctgaacctgaccaggattctgtttgtaccgaggaggtggctgcaaacgctactggtcttatcggctagacagtcgccccagagatggaaaatgatactgacggtgggggtgcccccccaagtcttgagaacaaatgagacaaccgtcgaagctaagggctctgtgcttgaatctgctccacttgcccatggtgagctgcgagttgagtttccatattctcccgcggctgaagggacagaccaacctattgaagatgaagaaactgaggaagctgtccacccttttgcattggtggttcatgatcctgtggatcatccgccgcctcctcctcctcccaccagattcgagagactgatgagggtgttagaggtaactcctccttctgctatggatgaggataagatggtgcttcacaaaaatctgggtcctcaggtattggagactgacatcctctcgcgaatcttggaagccctaaggtatctttcccaggagaaggaattgaccctgcagcaatttagtgccattgactatctgctgaatgaacttggtggggcccgccaacgtcaaccggccgcgaacgcccaggctcacgacacttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

750

Amino Acids

83.39

Weight (kDa)

4.91

Isoelectric Point (pI)

56.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000214)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0079611
rosa_multiflora Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha Rh3DG208400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 684
Acc65I GGTACC 1 cut(s) 904
AccB1I GGYRCC 4 cut(s) 562, 904, 1465, 1762
AccBSI CCGCTC 1 cut(s) 1641
AccI GTMKAC 1 cut(s) 121
AclWI GGATC 4 cut(s) 1373, 1624, 1949, 1971
AcoI YGGCCR 2 cut(s) 669, 2223
AcsI RAATTY 1 cut(s) 417
AcuI CTGAAG 2 cut(s) 1338, 1902
AfaI GTAC 5 cut(s) 341, 379, 631, 906, 1680
AfeI AGCGCT 1 cut(s) 1026
AgeI ACCGGT 1 cut(s) 712
AgsI TTSAA 6 cut(s) 416, 827, 1175, 1445, 1823, 1904
AhlI ACTAGT 1 cut(s) 1438
AjnI CCWGG 7 cut(s) 65, 335, 908, 964, 1664, 2139, 2235
AjuI GAANNNNNNNTTGG 1 cut(s) 34
AluBI AGCT 4 cut(s) 959, 1805, 1849, 1925
AluI AGCT 4 cut(s) 959, 1805, 1849, 1925
Alw26I GTCTC 5 cut(s) 255, 1568, 1784, 1996, 2087
AlwI GGATC 4 cut(s) 1373, 1624, 1949, 1971
AlwNI CAGNNNCTG 1 cut(s) 1415
Ama87I CYCGRG 1 cut(s) 767
Aor51HI AGCGCT 1 cut(s) 1026
ApaI GGGCCC 1 cut(s) 2209
ApeKI GCWGC 4 cut(s) 1280, 1693, 1849, 2161
ApoI RAATTY 1 cut(s) 417
AsiGI ACCGGT 1 cut(s) 712
Asp700I GAANNNNTTC 1 cut(s) 17
Asp718I GGTACC 1 cut(s) 904
AspLEI GCGC 3 cut(s) 440, 1027, 1307
AsuC2I CCSGG 5 cut(s) 236, 423, 583, 768, 769
AsuHPI GGTGA 2 cut(s) 55, 1856
AvaI CYCGRG 1 cut(s) 767
AvaII GGWCC 9 cut(s) 164, 274, 660, 1095, 1360, 1371, 1403, 1505, 2078
AxyI CCTNAGG 4 cut(s) 1206, 1230, 2082, 2126
BaeGI GKGCMC 3 cut(s) 358, 1767, 2209
BalI TGGCCA 1 cut(s) 671
BanI GGYRCC 4 cut(s) 562, 904, 1465, 1762
BanII GRGCYC 2 cut(s) 1814, 2209
BbsI GAAGAC 1 cut(s) 404
BbvCI CCTCAGC 2 cut(s) 1269, 1408
BbvI GCAGC 4 cut(s) 1267, 1680, 1836, 2173
BccI CCATC 9 cut(s) 121, 227, 239, 560, 1130, 1181, 1483, 1731, 2050
BceAI ACGGC 2 cut(s) 210, 1139
BcgI CGANNNNNNTGC 2 cut(s) 842, 876
BciT130I CCWGG 7 cut(s) 67, 337, 910, 966, 1666, 2141, 2237
BclI TGATCA 1 cut(s) 28
BcnI CCSGG 5 cut(s) 236, 423, 583, 768, 769
BcoDI GTCTC 5 cut(s) 255, 1568, 1784, 1996, 2087
BcuI ACTAGT 1 cut(s) 1438
BfaI CTAG 3 cut(s) 1439, 1625, 1719
BfmI CTRYAG 3 cut(s) 1416, 1488, 2159
BfoI RGCGCY 1 cut(s) 1028
Bme18I GGWCC 9 cut(s) 164, 274, 660, 1095, 1360, 1371, 1403, 1505, 2078
BmeT110I CYCGRG 1 cut(s) 767
BmrI ACTGGG 1 cut(s) 892
BmsI GCATC 4 cut(s) 14, 385, 1457, 1504
BmuI ACTGGG 1 cut(s) 892
BoxI GACNNNNGTC 2 cut(s) 408, 1796
BpiI GAAGAC 1 cut(s) 404
BplI GAGNNNNNCTC 2 cut(s) 943, 975
Bpu10I CCTNAGC 4 cut(s) 1269, 1391, 1408, 1806
BpuEI CTTGAG 2 cut(s) 620, 1798
BpuMI CCSGG 5 cut(s) 236, 423, 583, 768, 769
BsaI GGTCTC 1 cut(s) 255
BsaWI WCCGGW 3 cut(s) 104, 246, 712
Bse118I RCCGGY 2 cut(s) 712, 2221
Bse1I ACTGG 3 cut(s) 655, 898, 1710
Bse21I CCTNAGG 4 cut(s) 1206, 1230, 2082, 2126
Bse3DI GCAATG 1 cut(s) 387
BseBI CCWGG 7 cut(s) 67, 337, 910, 966, 1666, 2141, 2237
BseMI GCAATG 1 cut(s) 387
BseMII CTCAG 9 cut(s) 39, 1221, 1260, 1382, 1422, 1557, 1563, 1908, 2096
BseNI ACTGG 3 cut(s) 655, 898, 1710
BseRI GAGGAG 9 cut(s) 125, 432, 1235, 1531, 1699, 1968, 1971, 1974, 2019
BseSI GKGCMC 3 cut(s) 358, 1767, 2209
BseX3I CGGCCG 1 cut(s) 2223
BseXI GCAGC 4 cut(s) 1267, 1680, 1836, 2173
Bsh1285I CGRYCG 2 cut(s) 181, 2226
BshNI GGYRCC 4 cut(s) 562, 904, 1465, 1762
BshTI ACCGGT 1 cut(s) 712
BsiEI CGRYCG 2 cut(s) 181, 2226
BsiHKCI CYCGRG 1 cut(s) 767
BsiSI CCGG 8 cut(s) 105, 236, 247, 423, 582, 713, 768, 2222
BslFI GGGAC 4 cut(s) 150, 213, 287, 1900
BsmAI GTCTC 5 cut(s) 255, 1568, 1784, 1996, 2087
BsmFI GGGAC 4 cut(s) 150, 213, 287, 1900
BsmI GAATGC 1 cut(s) 59
Bso31I GGTCTC 1 cut(s) 255
BsoBI CYCGRG 1 cut(s) 767
Bsp120I GGGCCC 1 cut(s) 2205
Bsp1286I GDGCHC 4 cut(s) 358, 1767, 1814, 2209
Bsp143I GATC 8 cut(s) 28, 178, 259, 1378, 1524, 1629, 1954, 1963
Bsp19I CCATGG 1 cut(s) 1840
Bsp68I TCGCGA 4 cut(s) 177, 738, 778, 2110
BspCNI CTCAG 9 cut(s) 40, 1222, 1261, 1383, 1421, 1556, 1564, 1909, 2095
BspHI TCATGA 2 cut(s) 571, 1951
BspMAI CTGCAG 2 cut(s) 1420, 2163
BspPI GGATC 4 cut(s) 1373, 1624, 1949, 1971
BspQI GCTCTTC 2 cut(s) 246, 1416
BspT107I GGYRCC 4 cut(s) 562, 904, 1465, 1762
BspTNI GGTCTC 1 cut(s) 255
BsrBI CCGCTC 1 cut(s) 1641
BsrDI GCAATG 1 cut(s) 387
BsrFI RCCGGY 2 cut(s) 712, 2221
BsrI ACTGG 3 cut(s) 655, 898, 1710
BssAI RCCGGY 2 cut(s) 712, 2221
BssMI GATC 8 cut(s) 28, 178, 259, 1378, 1524, 1629, 1954, 1963
BssT1I CCWWGG 3 cut(s) 703, 1013, 1840
Bst2UI CCWGG 7 cut(s) 67, 337, 910, 966, 1666, 2141, 2237
Bst4CI ACNGT 7 cut(s) 382, 694, 1109, 1163, 1725, 1756, 1798
Bst6I CTCTTC 5 cut(s) 246, 775, 1314, 1416, 1476
BstC8I GCNNGC 4 cut(s) 370, 374, 478, 2209
BstDSI CCRYGG 5 cut(s) 450, 1155, 1461, 1840, 1875
BstENI CCTNNNNNAGG 2 cut(s) 1268, 1394
BstH2I RGCGCY 1 cut(s) 1028
BstHHI GCGC 3 cut(s) 440, 1027, 1307
BstKTI GATC 8 cut(s) 31, 181, 262, 1381, 1527, 1632, 1957, 1966
BstMAI GTCTC 5 cut(s) 255, 1568, 1784, 1996, 2087
BstMBI GATC 8 cut(s) 28, 178, 259, 1378, 1524, 1629, 1954, 1963
BstMCI CGRYCG 2 cut(s) 181, 2226
BstMWI GCNNNNNNNGC 9 cut(s) 138, 435, 446, 744, 1313, 1563, 1699, 1835, 2231
BstNI CCWGG 7 cut(s) 67, 337, 910, 966, 1666, 2141, 2237
BstPAI GACNNNNGTC 2 cut(s) 408, 1796
BstSFI CTRYAG 3 cut(s) 1416, 1488, 2159
BstSLI GKGCMC 3 cut(s) 358, 1767, 2209
BstV1I GCAGC 4 cut(s) 1267, 1680, 1836, 2173
BstV2I GAAGAC 1 cut(s) 404
BstX2I RGATCY 1 cut(s) 1629
BstYI RGATCY 1 cut(s) 1629
BstZI CGGCCG 1 cut(s) 2223
Bsu36I CCTNAGG 4 cut(s) 1206, 1230, 2082, 2126
BtgI CCRYGG 5 cut(s) 450, 1155, 1461, 1840, 1875
BtgZI GCGATG 2 cut(s) 759, 1130
BtsI GCAGTG 2 cut(s) 672, 1413
BtsIMutI CAGTG 5 cut(s) 45, 672, 1168, 1374, 1413
BtuMI TCGCGA 4 cut(s) 177, 738, 778, 2110
Cac8I GCNNGC 4 cut(s) 370, 374, 478, 2209
CaiI CAGNNNCTG 1 cut(s) 1415
CciI TCATGA 2 cut(s) 571, 1951
CfoI GCGC 3 cut(s) 440, 1027, 1307
Cfr10I RCCGGY 2 cut(s) 712, 2221
Cfr42I CCGCGG 2 cut(s) 453, 1878
Cfr9I CCCGGG 1 cut(s) 767
Csp6I GTAC 5 cut(s) 340, 378, 630, 905, 1679
CspAI ACCGGT 1 cut(s) 712
CviAII CATG 6 cut(s) 79, 572, 1099, 1298, 1841, 1952
CviQI GTAC 5 cut(s) 340, 378, 630, 905, 1679
DpnI GATC 8 cut(s) 30, 180, 261, 1380, 1526, 1631, 1956, 1965
DpnII GATC 8 cut(s) 28, 178, 259, 1378, 1524, 1629, 1954, 1963
EaeI YGGCCR 2 cut(s) 669, 2223
EagI CGGCCG 1 cut(s) 2223
Eam1104I CTCTTC 5 cut(s) 246, 775, 1314, 1416, 1476
EarI CTCTTC 5 cut(s) 246, 775, 1314, 1416, 1476
EciI GGCGGA 5 cut(s) 85, 951, 964, 1188, 1959
EclXI CGGCCG 1 cut(s) 2223
Eco130I CCWWGG 3 cut(s) 703, 1013, 1840
Eco24I GRGCYC 2 cut(s) 1814, 2209
Eco31I GGTCTC 1 cut(s) 255
Eco47I GGWCC 9 cut(s) 164, 274, 660, 1095, 1360, 1371, 1403, 1505, 2078
Eco47III AGCGCT 1 cut(s) 1026
Eco52I CGGCCG 1 cut(s) 2223
Eco57I CTGAAG 2 cut(s) 1338, 1902
Eco81I CCTNAGG 4 cut(s) 1206, 1230, 2082, 2126
Eco88I CYCGRG 1 cut(s) 767
EcoNI CCTNNNNNAGG 2 cut(s) 1268, 1394
EcoO109I RGGNCCY 4 cut(s) 164, 1505, 2078, 2205
EcoRII CCWGG 7 cut(s) 65, 335, 908, 964, 1664, 2139, 2235
EcoT14I CCWWGG 3 cut(s) 703, 1013, 1840
EcoT38I GRGCYC 2 cut(s) 1814, 2209
ErhI CCWWGG 3 cut(s) 703, 1013, 1840
FaeI CATG 6 cut(s) 82, 575, 1102, 1301, 1844, 1955
FaqI GGGAC 4 cut(s) 150, 213, 287, 1900
FatI CATG 6 cut(s) 78, 571, 1098, 1297, 1840, 1951
FauI CCCGC 3 cut(s) 1646, 1882, 2216
FbaI TGATCA 1 cut(s) 28
FblI GTMKAC 1 cut(s) 121
FriOI GRGCYC 2 cut(s) 1814, 2209
FspBI CTAG 3 cut(s) 1439, 1625, 1719
GlaI GCGC 3 cut(s) 439, 1026, 1306
HaeII RGCGCY 1 cut(s) 1028
HapII CCGG 8 cut(s) 105, 236, 247, 423, 582, 713, 768, 2222
HhaI GCGC 3 cut(s) 440, 1027, 1307
Hin1II CATG 6 cut(s) 82, 575, 1102, 1301, 1844, 1955
Hin6I GCGC 3 cut(s) 438, 1025, 1305
HinP1I GCGC 3 cut(s) 438, 1025, 1305
HincII GTYRAC 3 cut(s) 122, 710, 2219
HindII GTYRAC 3 cut(s) 122, 710, 2219
HpaII CCGG 8 cut(s) 105, 236, 247, 423, 582, 713, 768, 2222
HphI GGTGA 2 cut(s) 55, 1856
Hpy166II GTNNAC 7 cut(s) 122, 644, 710, 993, 1159, 1930, 2219
Hpy188I TCNGA 7 cut(s) 102, 984, 1022, 1546, 1573, 1647, 1656
Hpy8I GTNNAC 7 cut(s) 122, 644, 710, 993, 1159, 1930, 2219
Hpy99I CGWCG 2 cut(s) 805, 1802
HpyAV CCTTC 4 cut(s) 604, 1877, 2043, 2140
HpyCH4III ACNGT 7 cut(s) 382, 694, 1109, 1163, 1725, 1756, 1798
HpyCH4IV ACGT 2 cut(s) 873, 2215
HpyCH4V TGCA 6 cut(s) 863, 1418, 1501, 1696, 1940, 2161
HpyF10VI GCNNNNNNNGC 9 cut(s) 138, 435, 446, 744, 1313, 1563, 1699, 1835, 2231
HpySE526I ACGT 2 cut(s) 873, 2215
Hsp92II CATG 6 cut(s) 82, 575, 1102, 1301, 1844, 1955
HspAI GCGC 3 cut(s) 438, 1025, 1305
KflI GGGWCCC 1 cut(s) 164
KpnI GGTACC 1 cut(s) 908
Ksp22I TGATCA 1 cut(s) 28
KspI CCGCGG 2 cut(s) 453, 1878
Kzo9I GATC 8 cut(s) 28, 178, 259, 1378, 1524, 1629, 1954, 1963
LguI GCTCTTC 2 cut(s) 246, 1416
LmnI GCTCC 5 cut(s) 445, 964, 1201, 1222, 1834
Lsp1109I GCAGC 4 cut(s) 1267, 1680, 1836, 2173
LweI GCATC 4 cut(s) 14, 385, 1457, 1504
MaeI CTAG 3 cut(s) 1439, 1625, 1719
MaeII ACGT 2 cut(s) 873, 2215
MaeIII GTNAC 3 cut(s) 848, 1109, 2023
MalI GATC 8 cut(s) 30, 180, 261, 1380, 1526, 1631, 1956, 1965
MbiI CCGCTC 1 cut(s) 1641
MboI GATC 8 cut(s) 28, 178, 259, 1378, 1524, 1629, 1954, 1963
MfeI CAATTG 2 cut(s) 827, 1087
MflI RGATCY 1 cut(s) 1629
MhlI GDGCHC 4 cut(s) 358, 1767, 1814, 2209
MlsI TGGCCA 1 cut(s) 671
MluNI TGGCCA 1 cut(s) 671
MlyI GAGTC 5 cut(s) 166, 300, 994, 1247, 1532
MmeI TCCRAC 3 cut(s) 343, 1073, 1657
Mox20I TGGCCA 1 cut(s) 671
MroXI GAANNNNTTC 1 cut(s) 17
MscI TGGCCA 1 cut(s) 671
MseI TTAA 1 cut(s) 432
MslI CAYNNNNRTG 2 cut(s) 1041, 1296
Msp20I TGGCCA 1 cut(s) 671
MspA1I CMGCKG 2 cut(s) 452, 1877
MspI CCGG 8 cut(s) 105, 236, 247, 423, 582, 713, 768, 2222
MunI CAATTG 2 cut(s) 827, 1087
Mva1269I GAATGC 1 cut(s) 59
MvaI CCWGG 7 cut(s) 67, 337, 910, 966, 1666, 2141, 2237
MwoI GCNNNNNNNGC 9 cut(s) 138, 435, 446, 744, 1313, 1563, 1699, 1835, 2231
NciI CCSGG 5 cut(s) 236, 423, 583, 768, 769
NcoI CCATGG 1 cut(s) 1840
NdeII GATC 8 cut(s) 28, 178, 259, 1378, 1524, 1629, 1954, 1963
NlaIII CATG 6 cut(s) 82, 575, 1102, 1301, 1844, 1955
NmeAIII GCCGAG 1 cut(s) 1243
NmuCI GTSAC 1 cut(s) 1109
NruI TCGCGA 4 cut(s) 177, 738, 778, 2110
PagI TCATGA 2 cut(s) 571, 1951
PciSI GCTCTTC 2 cut(s) 246, 1416
PctI GAATGC 1 cut(s) 59
PdmI GAANNNNTTC 1 cut(s) 17
PfeI GAWTC 8 cut(s) 730, 923, 1006, 1612, 1669, 1823, 1995, 2112
PinAI ACCGGT 1 cut(s) 712
Ple19I CGATCG 1 cut(s) 181
PleI GAGTC 5 cut(s) 165, 299, 993, 1246, 1532
PpsI GAGTC 5 cut(s) 165, 299, 993, 1246, 1532
PpuMI RGGWCCY 3 cut(s) 164, 1505, 2078
PshAI GACNNNNGTC 2 cut(s) 408, 1796
PsiI TTATAA 1 cut(s) 684
Psp5II RGGWCCY 3 cut(s) 164, 1505, 2078
Psp6I CCWGG 7 cut(s) 65, 335, 908, 964, 1664, 2139, 2235
PspGI CCWGG 7 cut(s) 65, 335, 908, 964, 1664, 2139, 2235
PspOMI GGGCCC 1 cut(s) 2205
PspPPI RGGWCCY 3 cut(s) 164, 1505, 2078
PstI CTGCAG 2 cut(s) 1420, 2163
PstNI CAGNNNCTG 1 cut(s) 1415
PsuI RGATCY 1 cut(s) 1629
PvuI CGATCG 1 cut(s) 181
RruI TCGCGA 4 cut(s) 177, 738, 778, 2110
RsaI GTAC 5 cut(s) 341, 379, 631, 906, 1680
RsaNI GTAC 5 cut(s) 340, 378, 630, 905, 1679
RseI CAYNNNNRTG 2 cut(s) 1041, 1296
SacII CCGCGG 2 cut(s) 453, 1878
SalI GTCGAC 1 cut(s) 120
SapI GCTCTTC 2 cut(s) 246, 1416
SaqAI TTAA 1 cut(s) 432
Sau3AI GATC 8 cut(s) 28, 178, 259, 1378, 1524, 1629, 1954, 1963
SchI GAGTC 5 cut(s) 166, 300, 994, 1247, 1532
SduI GDGCHC 4 cut(s) 358, 1767, 1814, 2209
SfaNI GCATC 4 cut(s) 14, 385, 1457, 1504
SfcI CTRYAG 3 cut(s) 1416, 1488, 2159
Sfr303I CCGCGG 2 cut(s) 453, 1878
SgrBI CCGCGG 2 cut(s) 453, 1878
SinI GGWCC 9 cut(s) 164, 274, 660, 1095, 1360, 1371, 1403, 1505, 2078
SmaI CCCGGG 1 cut(s) 769
SmiMI CAYNNNNRTG 2 cut(s) 1041, 1296
SmlI CTYRAG 2 cut(s) 599, 1777
SmoI CTYRAG 2 cut(s) 599, 1777
SpeI ACTAGT 1 cut(s) 1438
SspI AATATT 1 cut(s) 1181
SspMI CTAG 3 cut(s) 1439, 1625, 1719
StyI CCWWGG 3 cut(s) 703, 1013, 1840
TaaI ACNGT 7 cut(s) 382, 694, 1109, 1163, 1725, 1756, 1798
TaiI ACGT 2 cut(s) 876, 2218
TaqI TCGA 4 cut(s) 88, 121, 1800, 1998
TatI WGTACW 1 cut(s) 629
TfiI GAWTC 8 cut(s) 730, 923, 1006, 1612, 1669, 1823, 1995, 2112
Tru1I TTAA 1 cut(s) 432
Tru9I TTAA 1 cut(s) 432
TscAI CASTG 5 cut(s) 52, 679, 1168, 1381, 1420
TseFI GTSAC 1 cut(s) 1109
TseI GCWGC 4 cut(s) 1280, 1693, 1849, 2161
Tsp45I GTSAC 1 cut(s) 1109
TspDTI ATGAA 6 cut(s) 855, 1115, 1566, 1923, 1940, 2208
TspGWI ACGGA 2 cut(s) 851, 1352
TspMI CCCGGG 1 cut(s) 767
TspRI CASTG 5 cut(s) 52, 679, 1168, 1381, 1420
VpaK11BI GGWCC 9 cut(s) 164, 274, 660, 1095, 1360, 1371, 1403, 1505, 2078
XagI CCTNNNNNAGG 2 cut(s) 1268, 1394
XapI RAATTY 1 cut(s) 417
XcmI CCANNNNNNNNNTGG 1 cut(s) 654
XmaI CCCGGG 1 cut(s) 767
XmiI GTMKAC 1 cut(s) 121
XmnI GAANNNNTTC 1 cut(s) 17
XspI CTAG 3 cut(s) 1439, 1625, 1719
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.