Rmu_sc0014075.1_g000001

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0014075.1
OG0000214
Physical Location & Seq
Forward (+)
2241 .. 3515
1275 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0014075.1_g000001.1.cds

Sequence Viewer

Length: 1275 bp
atggcatccaagaaaccattcattatcgatcaggcagatgaaatcactgagaaagctgcattcaactggcggactaacatgagtattcgatgtagacgtcagaccggagaggagagaagccgactgatgggctttggtggcgatgatagtcaagcgagtctgggtcccacacctcgcgatcgtttgccagatgatgctatggcctattatgggcttcccatccgccgtcccatagtggctcttcggcaggtgcctggtgattttagcagttggggaccaagaaggaaagtgggcttctggcctactgtcactcccgaggaaaaggtttggtatcaggaggtccgagcgagagatttggcccgatgggacgcggtgggtatcacccaaaccatcgatctatacttctatcttccccataatactagccctacaccgctagccgcctctctttgcttctggaacacctccagcaatacattcgatttccggtttgggcagatgagcataactctgctggatgttcttaccatcacggggttgcccattgactttgacccctatgtgcatggtcagtttgatggcattcaattttctttgagaatggatatgactggtcgagggcatcacagcaaatcctacccattctggcgctactattactgcacccagcgtgactatacaggaggtatcgcattcctggaattctggctttgcaaatttatcttttgcacttcttccaacaaacctactaggccctggaattctctggccactgctctctacaatggtatttacgttggccttgggcaacctatattgggtgcgttatatcgctccctttatagagtcgtaatgcgcccatttgataccaacattagtggcccgttctggatccttgccttttggctgcagatttatttcactctcttccgtcgcggcgatattccaaaggaacctccagttaattcccttttggggaactggctttgccgcaacgtaaggtatcgagctccaccctactccgagtgttttatttacttgtactcgctgggagagatgccggacccaaaaatagtcctttctaggcaattccctcctccccttaatgaaggctttctgcccagtggacgggatcatagtgaaagaggcctcctggccttttgtcgcgccatctcttgcttggatattcgtcttgccactgatcgcgtaagttacgagctctattcccctaaccactttgcccgccaatttgggttggcccagtcgataccctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

424

Amino Acids

48.89

Weight (kDa)

9.05

Isoelectric Point (pI)

45.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000214)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0079611
rosa_multiflora Rmu_co8150358.1_g000001 Rmu_co8306601.1_g000001 Rmu_sc0000032.1_g000018 Rmu_sc0000110.1_g000025 Rmu_sc0000110.1_g000026 Rmu_sc0000126.1_g000018 Rmu_sc0000147.1_g000058 Rmu_sc0000187.1_g000010 Rmu_sc0000240.1_g000061 Rmu_sc0000240.1_g000062 Rmu_sc0000258.1_g000018 Rmu_sc0000258.1_g000020 Rmu_sc0000276.1_g000075 Rmu_sc0000276.1_g000076 Rmu_sc0000356.1_g000007 Rmu_sc0000360.1_g000033 Rmu_sc0000368.1_g000014 Rmu_sc0000368.1_g000026 Rmu_sc0000389.1_g000011 Rmu_sc0000588.1_g000024 Rmu_sc0000595.1_g000060 Rmu_sc0000744.1_g000144 Rmu_sc0000744.1_g000145 Rmu_sc0000770.1_g000053 Rmu_sc0000795.1_g000096 Rmu_sc0000810.1_g000011 Rmu_sc0000935.1_g000066 Rmu_sc0000945.1_g000014 Rmu_sc0000962.1_g000011 Rmu_sc0000962.1_g000023 Rmu_sc0000962.1_g000024 Rmu_sc0001047.1_g000012 Rmu_sc0001094.1_g000015 Rmu_sc0001097.1_g000032 Rmu_sc0001254.1_g000006 Rmu_sc0001264.1_g000026 Rmu_sc0001322.1_g000013 Rmu_sc0001373.1_g000001 Rmu_sc0001424.1_g000002 Rmu_sc0001455.1_g000009 Rmu_sc0001461.1_g000008 Rmu_sc0001461.1_g000058 Rmu_sc0001563.1_g000014 Rmu_sc0001793.1_g000012 Rmu_sc0001793.1_g000013 Rmu_sc0001796.1_g000010 Rmu_sc0001817.1_g000004 Rmu_sc0002141.1_g000011 Rmu_sc0002141.1_g000012 Rmu_sc0002183.1_g000010 Rmu_sc0002183.1_g000015 Rmu_sc0002212.1_g000033 Rmu_sc0002212.1_g000034 Rmu_sc0002263.1_g000049 Rmu_sc0002263.1_g000050 Rmu_sc0002263.1_g000055 Rmu_sc0002263.1_g000056 Rmu_sc0002489.1_g000039 Rmu_sc0002654.1_g000003 Rmu_sc0002680.1_g000036 Rmu_sc0002745.1_g000013 Rmu_sc0002751.1_g000001 Rmu_sc0002769.1_g000013 Rmu_sc0002972.1_g000004 Rmu_sc0002985.1_g000011 Rmu_sc0003199.1_g000002 Rmu_sc0003207.1_g000020 Rmu_sc0003402.1_g000005 Rmu_sc0003500.1_g000009 Rmu_sc0003500.1_g000010 Rmu_sc0003600.1_g000051 Rmu_sc0003809.1_g000025 Rmu_sc0003859.1_g000029 Rmu_sc0003859.1_g000030 Rmu_sc0003994.1_g000025 Rmu_sc0004085.1_g000010 Rmu_sc0004085.1_g000015 Rmu_sc0004165.1_g000061 Rmu_sc0004525.1_g000006 Rmu_sc0004549.1_g000012 Rmu_sc0004598.1_g000035 Rmu_sc0004835.1_g000007 Rmu_sc0004881.1_g000008 Rmu_sc0005325.1_g000004 Rmu_sc0005325.1_g000006 Rmu_sc0005608.1_g000003 Rmu_sc0005747.1_g000026 Rmu_sc0006153.1_g000059 Rmu_sc0006273.1_g000010 Rmu_sc0006737.1_g000002 Rmu_sc0006737.1_g000003 Rmu_sc0006984.1_g000006 Rmu_sc0006984.1_g000007 Rmu_sc0007170.1_g000001 Rmu_sc0007801.1_g000002 Rmu_sc0007992.1_g000008 Rmu_sc0008698.1_g000003 Rmu_sc0010817.1_g000001 Rmu_sc0010817.1_g000021 Rmu_sc0011207.1_g000001 Rmu_sc0012533.1_g000007 Rmu_sc0012742.1_g000008 Rmu_sc0014075.1_g000001 Rmu_sc0017009.1_g000004 Rmu_sc0018430.1_g000002 Rmu_sc0020146.1_g000003 Rmu_sc0021186.1_g000001 Rmu_sc0023004.1_g000001 Rmu_sc0024933.1_g000001 Rmu_sc0026002.1_g000001 Rmu_sc0026989.1_g000005 Rmu_sc0028107.1_g000001 Rmu_sc0028108.1_g000001 Rmu_sc0032899.1_g000001 Rmu_sc0039686.1_g000001 Rmu_ssc0000134.1_g000054 Rmu_ssc0000213.1_g000089 Rmu_ssc0000295.1_g000043 Rmu_ssc0000295.1_g000045 Rmu_ssc0000309.1_g000024 Rmu_ssc0000309.1_g000025 Rmu_ssc0000438.1_g000003 Rmu_ssc0000438.1_g000017 Rmu_ssc0000438.1_g000018
rosa_roxburghii Rroxscaffold_1G00020710 Rroxscaffold_2G00077350 Rroxscaffold_2G00077360 Rroxscaffold_2G00137810 Rroxscaffold_2G00142810 Rroxscaffold_2G00143580 Rroxscaffold_2G00152890 Rroxscaffold_3G00248850 Rroxscaffold_4G00324400 Rroxscaffold_4G00329960 Rroxscaffold_4G00329970 Rroxscaffold_5G00339350 Rroxscaffold_5G00343640 Rroxscaffold_6G00393540 Rroxscaffold_6G00400820 Rroxscaffold_6G00408530 Rroxscaffold_6G00408540 Rroxscaffold_6G00414590 Rroxscaffold_6G00414600 Rroxscaffold_7G00180540 Rroxscaffold_7G00199530 Rroxscaffold_7G00203170 Rroxscaffold_7G00217520
rosa_samantha Rh3DG208400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 238
AatII GACGTC 1 cut(s) 100
Acc36I ACCTGC 1 cut(s) 238
AccB1I GGYRCC 1 cut(s) 250
AccI GTMKAC 1 cut(s) 94
AccII CGCG 5 cut(s) 177, 371, 936, 1167, 1206
AciI CCGC 8 cut(s) 70, 223, 371, 434, 441, 936, 991, 1243
AclWI GGATC 3 cut(s) 886, 899, 1140
AcoI YGGCCR 1 cut(s) 768
AcsI RAATTY 3 cut(s) 701, 716, 760
AcyI GRCGYC 1 cut(s) 97
AfaI GTAC 1 cut(s) 1043
AfiI CCNNNNNNNGG 6 cut(s) 127, 210, 534, 818, 975, 1128
AgsI TTSAA 2 cut(s) 64, 587
AjnI CCWGG 4 cut(s) 253, 696, 755, 1152
AjuI GAANNNNNNNTTGG 1 cut(s) 34
AluBI AGCT 3 cut(s) 56, 1010, 1219
AluI AGCT 3 cut(s) 56, 1010, 1219
Alw21I GWGCWC 2 cut(s) 1012, 1221
AlwI GGATC 3 cut(s) 886, 899, 1140
Ama87I CYCGRG 1 cut(s) 314
ApeKI GCWGC 2 cut(s) 56, 907
ApoI RAATTY 3 cut(s) 701, 716, 760
Asp700I GAANNNNTTC 2 cut(s) 17, 1113
AspLEI GCGC 3 cut(s) 651, 858, 1169
AspS9I GGNCC 8 cut(s) 164, 275, 340, 358, 753, 881, 1063, 1258
AsuHPI GGTGA 2 cut(s) 269, 373
AsuNHI GCTAGC 1 cut(s) 436
AvaI CYCGRG 1 cut(s) 314
AvaII GGWCC 4 cut(s) 164, 275, 340, 1063
BalI TGGCCA 1 cut(s) 770
BamHI GGATCC 1 cut(s) 891
BanI GGYRCC 1 cut(s) 250
BanII GRGCYC 2 cut(s) 1012, 1221
Bbv12I GWGCWC 2 cut(s) 1012, 1221
BbvI GCAGC 2 cut(s) 43, 894
BccI CCATC 7 cut(s) 121, 227, 357, 398, 536, 572, 1178
BceAI ACGGC 1 cut(s) 210
BcgI CGANNNNNNTGC 2 cut(s) 460, 494
BciT130I CCWGG 4 cut(s) 255, 698, 757, 1154
BfaI CTAG 5 cut(s) 423, 437, 750, 1083, 1273
BfmI CTRYAG 1 cut(s) 908
BfoI RGCGCY 1 cut(s) 652
BfuAI ACCTGC 1 cut(s) 238
BisI GCNGC 5 cut(s) 57, 441, 908, 937, 991
BlsI GCNGC 5 cut(s) 58, 442, 909, 938, 992
Bme1390I CCNGG 4 cut(s) 255, 698, 757, 1154
Bme18I GGWCC 4 cut(s) 164, 275, 340, 1063
BmeT110I CYCGRG 1 cut(s) 314
BmgT120I GGNCC 8 cut(s) 164, 275, 340, 358, 753, 881, 1063, 1258
BmiI GGNNCC 7 cut(s) 165, 166, 252, 276, 893, 954, 1065
BmrFI CCNGG 4 cut(s) 255, 698, 757, 1154
BmrI ACTGGG 2 cut(s) 1116, 1255
BmsI GCATC 4 cut(s) 14, 184, 631, 1047
BmtI GCTAGC 1 cut(s) 440
BmuI ACTGGG 2 cut(s) 1116, 1255
BplI GAGNNNNNCTC 2 cut(s) 493, 525
BpmI CTGGAG 2 cut(s) 451, 942
Bsa29I ATCGAT 2 cut(s) 27, 393
BsaHI GRCGYC 1 cut(s) 97
BsaJI CCNNGG 3 cut(s) 315, 755, 802
BsaWI WCCGGW 2 cut(s) 104, 486
BsaXI ACNNNNNCTCC 2 cut(s) 295, 325
Bsc4I CCNNNNNNNGG 6 cut(s) 127, 210, 534, 818, 975, 1128
Bse1I ACTGG 6 cut(s) 71, 616, 959, 986, 1122, 1261
BseBI CCWGG 4 cut(s) 255, 698, 757, 1154
BseCI ATCGAT 2 cut(s) 27, 393
BseDI CCNNGG 3 cut(s) 315, 755, 802
BseGI GGATG 3 cut(s) 5, 219, 523
BseLI CCNNNNNNNGG 6 cut(s) 127, 210, 534, 818, 975, 1128
BseMII CTCAG 1 cut(s) 39
BseNI ACTGG 6 cut(s) 71, 616, 959, 986, 1122, 1261
BseRI GAGGAG 2 cut(s) 125, 1086
BseXI GCAGC 2 cut(s) 43, 894
BseYI CCCAGC 2 cut(s) 666, 1048
BsgI GTGCAG 1 cut(s) 646
Bsh1236I CGCG 5 cut(s) 177, 371, 936, 1167, 1206
Bsh1285I CGRYCG 1 cut(s) 181
BshNI GGYRCC 1 cut(s) 250
BshVI ATCGAT 2 cut(s) 27, 393
BsiEI CGRYCG 1 cut(s) 181
BsiHKAI GWGCWC 2 cut(s) 1012, 1221
BsiHKCI CYCGRG 1 cut(s) 314
BsiSI CCGG 3 cut(s) 105, 487, 1061
BslFI GGGAC 4 cut(s) 150, 213, 288, 380
BslI CCNNNNNNNGG 6 cut(s) 127, 210, 534, 818, 975, 1128
BsmFI GGGAC 4 cut(s) 150, 213, 288, 380
BsmI GAATGC 3 cut(s) 59, 582, 692
BsoBI CYCGRG 1 cut(s) 314
Bsp1286I GDGCHC 2 cut(s) 1012, 1221
Bsp143I GATC 6 cut(s) 28, 178, 394, 891, 1132, 1201
Bsp68I TCGCGA 1 cut(s) 177
BspACI CCGC 8 cut(s) 70, 223, 371, 434, 441, 936, 991, 1243
BspCNI CTCAG 1 cut(s) 40
BspDI ATCGAT 2 cut(s) 27, 393
BspFNI CGCG 5 cut(s) 177, 371, 936, 1167, 1206
BspLI GGNNCC 7 cut(s) 165, 166, 252, 276, 893, 954, 1065
BspMAI CTGCAG 1 cut(s) 912
BspMI ACCTGC 1 cut(s) 238
BspOI GCTAGC 1 cut(s) 440
BspPI GGATC 3 cut(s) 886, 899, 1140
BspQI GCTCTTC 1 cut(s) 246
BspT107I GGYRCC 1 cut(s) 250
BsrI ACTGG 6 cut(s) 71, 616, 959, 986, 1122, 1261
BssECI CCNNGG 3 cut(s) 315, 755, 802
BssMI GATC 6 cut(s) 28, 178, 394, 891, 1132, 1201
BssNI GRCGYC 1 cut(s) 97
BssT1I CCWWGG 1 cut(s) 802
Bst2UI CCWGG 4 cut(s) 255, 698, 757, 1154
Bst4CI ACNGT 1 cut(s) 307
Bst6I CTCTTC 2 cut(s) 246, 932
BstACI GRCGYC 1 cut(s) 97
BstC8I GCNNGC 2 cut(s) 438, 1243
BstDEI CTNAG 1 cut(s) 48
BstF5I GGATG 3 cut(s) 5, 219, 523
BstFNI CGCG 5 cut(s) 177, 371, 936, 1167, 1206
BstH2I RGCGCY 1 cut(s) 652
BstHHI GCGC 3 cut(s) 651, 858, 1169
BstKTI GATC 6 cut(s) 31, 181, 397, 894, 1135, 1204
BstMBI GATC 6 cut(s) 28, 178, 394, 891, 1132, 1201
BstMCI CGRYCG 1 cut(s) 181
BstMWI GCNNNNNNNGC 1 cut(s) 138
BstNI CCWGG 4 cut(s) 255, 698, 757, 1154
BstSCI CCNGG 4 cut(s) 253, 696, 755, 1152
BstSFI CTRYAG 1 cut(s) 908
BstUI CGCG 5 cut(s) 177, 371, 936, 1167, 1206
BstV1I GCAGC 2 cut(s) 43, 894
BstX2I RGATCY 1 cut(s) 891
BstYI RGATCY 1 cut(s) 891
Bsu15I ATCGAT 2 cut(s) 27, 393
BsuTUI ATCGAT 2 cut(s) 27, 393
BtgZI GCGATG 1 cut(s) 156
BtsCI GGATG 3 cut(s) 5, 219, 523
BtsI GCAGTG 1 cut(s) 771
BtsIMutI CAGTG 4 cut(s) 45, 771, 1129, 1197
BtuMI TCGCGA 1 cut(s) 177
BveI ACCTGC 1 cut(s) 238
Cac8I GCNNGC 2 cut(s) 438, 1243
CfoI GCGC 3 cut(s) 651, 858, 1169
Cfr13I GGNCC 8 cut(s) 164, 275, 340, 358, 753, 881, 1063, 1258
ClaI ATCGAT 2 cut(s) 27, 393
CseI GACGC 1 cut(s) 377
Csp6I GTAC 1 cut(s) 1042
CspCI CAANNNNNGTGG 2 cut(s) 859, 894
CviAII CATG 2 cut(s) 79, 566
CviQI GTAC 1 cut(s) 1042
DdeI CTNAG 1 cut(s) 48
DpnI GATC 6 cut(s) 30, 180, 396, 893, 1134, 1203
DpnII GATC 6 cut(s) 28, 178, 394, 891, 1132, 1201
EaeI YGGCCR 1 cut(s) 768
Eam1104I CTCTTC 2 cut(s) 246, 932
EarI CTCTTC 2 cut(s) 246, 932
EciI GGCGGA 2 cut(s) 85, 212
Ecl136II GAGCTC 2 cut(s) 1010, 1219
Eco130I CCWWGG 1 cut(s) 802
Eco147I AGGCCT 1 cut(s) 1149
Eco24I GRGCYC 2 cut(s) 1012, 1221
Eco47I GGWCC 4 cut(s) 164, 275, 340, 1063
Eco53kI GAGCTC 2 cut(s) 1010, 1219
Eco88I CYCGRG 1 cut(s) 314
EcoICRI GAGCTC 2 cut(s) 1010, 1219
EcoO109I RGGNCCY 2 cut(s) 164, 753
EcoRI GAATTC 2 cut(s) 701, 760
EcoRII CCWGG 4 cut(s) 253, 696, 755, 1152
EcoT14I CCWWGG 1 cut(s) 802
EcoT38I GRGCYC 2 cut(s) 1012, 1221
ErhI CCWWGG 1 cut(s) 802
FaeI CATG 2 cut(s) 82, 569
FaqI GGGAC 4 cut(s) 150, 213, 288, 380
FatI CATG 2 cut(s) 78, 565
FauI CCCGC 1 cut(s) 1250
FblI GTMKAC 1 cut(s) 94
Fnu4HI GCNGC 5 cut(s) 57, 441, 908, 937, 991
FokI GGATG 2 cut(s) 206, 530
FriOI GRGCYC 2 cut(s) 1012, 1221
Fsp4HI GCNGC 5 cut(s) 57, 441, 908, 937, 991
FspBI CTAG 5 cut(s) 423, 437, 750, 1083, 1273
GlaI GCGC 3 cut(s) 650, 857, 1168
GluI GCNGC 5 cut(s) 57, 441, 908, 937, 991
GsaI CCCAGC 2 cut(s) 670, 1052
GsuI CTGGAG 2 cut(s) 451, 942
HaeII RGCGCY 1 cut(s) 652
HapII CCGG 3 cut(s) 105, 487, 1061
HgaI GACGC 1 cut(s) 377
HhaI GCGC 3 cut(s) 651, 858, 1169
Hin1I GRCGYC 1 cut(s) 97
Hin1II CATG 2 cut(s) 82, 569
Hin6I GCGC 3 cut(s) 649, 856, 1167
HinP1I GCGC 3 cut(s) 649, 856, 1167
HinfI GANTC 2 cut(s) 157, 846
HpaII CCGG 3 cut(s) 105, 487, 1061
HphI GGTGA 2 cut(s) 269, 373
Hpy166II GTNNAC 2 cut(s) 95, 1127
Hpy188I TCNGA 3 cut(s) 102, 344, 1024
Hpy188III TCNNGA 5 cut(s) 176, 314, 335, 457, 889
Hpy8I GTNNAC 2 cut(s) 95, 1127
Hpy99I CGWCG 1 cut(s) 936
HpyAV CCTTC 2 cut(s) 276, 1103
HpyCH4III ACNGT 1 cut(s) 307
HpyCH4IV ACGT 3 cut(s) 97, 795, 996
HpyCH4V TGCA 6 cut(s) 59, 565, 663, 714, 729, 910
HpyF10VI GCNNNNNNNGC 1 cut(s) 138
HpyF3I CTNAG 1 cut(s) 48
HpySE526I ACGT 3 cut(s) 97, 795, 996
Hsp92I GRCGYC 1 cut(s) 97
Hsp92II CATG 2 cut(s) 82, 569
HspAI GCGC 3 cut(s) 649, 856, 1167
KflI GGGWCCC 1 cut(s) 164
Kzo9I GATC 6 cut(s) 28, 178, 394, 891, 1132, 1201
LguI GCTCTTC 1 cut(s) 246
LmnI GCTCC 2 cut(s) 839, 1015
Lsp1109I GCAGC 2 cut(s) 43, 894
LweI GCATC 4 cut(s) 14, 184, 631, 1047
MaeI CTAG 5 cut(s) 423, 437, 750, 1083, 1273
MaeII ACGT 3 cut(s) 97, 795, 996
MaeIII GTNAC 3 cut(s) 307, 671, 1211
MalI GATC 6 cut(s) 30, 180, 396, 893, 1134, 1203
MboI GATC 6 cut(s) 28, 178, 394, 891, 1132, 1201
MboII GAAGA 4 cut(s) 233, 401, 726, 919
MflI RGATCY 1 cut(s) 891
MhlI GDGCHC 2 cut(s) 1012, 1221
MlsI TGGCCA 1 cut(s) 770
MluCI AATT 7 cut(s) 587, 701, 716, 760, 964, 1088, 1247
MluNI TGGCCA 1 cut(s) 770
MlyI GAGTC 2 cut(s) 166, 855
MmeI TCCRAC 1 cut(s) 762
Mox20I TGGCCA 1 cut(s) 770
MroXI GAANNNNTTC 2 cut(s) 17, 1113
MscI TGGCCA 1 cut(s) 770
MseI TTAA 2 cut(s) 963, 1104
Msp20I TGGCCA 1 cut(s) 770
MspI CCGG 3 cut(s) 105, 487, 1061
MspR9I CCNGG 4 cut(s) 255, 698, 757, 1154
Mva1269I GAATGC 3 cut(s) 59, 582, 692
MvaI CCWGG 4 cut(s) 255, 698, 757, 1154
MvnI CGCG 5 cut(s) 177, 371, 936, 1167, 1206
MwoI GCNNNNNNNGC 1 cut(s) 138
NdeII GATC 6 cut(s) 28, 178, 394, 891, 1132, 1201
NheI GCTAGC 1 cut(s) 436
NlaIII CATG 2 cut(s) 82, 569
NlaIV GGNNCC 7 cut(s) 165, 166, 252, 276, 893, 954, 1065
NmuCI GTSAC 2 cut(s) 307, 671
NruI TCGCGA 1 cut(s) 177
PaqCI CACCTGC 1 cut(s) 238
PceI AGGCCT 1 cut(s) 1149
PciSI GCTCTTC 1 cut(s) 246
PcsI WCGNNNNNNNCGW 1 cut(s) 94
PctI GAATGC 3 cut(s) 59, 582, 692
PdmI GAANNNNTTC 2 cut(s) 17, 1113
PfoI TCCNGGA 1 cut(s) 696
PkrI GCNGC 5 cut(s) 58, 442, 909, 938, 992
Ple19I CGATCG 1 cut(s) 181
PleI GAGTC 2 cut(s) 165, 854
PpsI GAGTC 2 cut(s) 165, 854
PpuMI RGGWCCY 1 cut(s) 164
Psp124BI GAGCTC 2 cut(s) 1012, 1221
Psp5II RGGWCCY 1 cut(s) 164
Psp6I CCWGG 4 cut(s) 253, 696, 755, 1152
PspFI CCCAGC 2 cut(s) 666, 1048
PspGI CCWGG 4 cut(s) 253, 696, 755, 1152
PspN4I GGNNCC 7 cut(s) 165, 166, 252, 276, 893, 954, 1065
PspPI GGNCC 8 cut(s) 164, 275, 340, 358, 753, 881, 1063, 1258
PspPPI RGGWCCY 1 cut(s) 164
PstI CTGCAG 1 cut(s) 912
PsuI RGATCY 1 cut(s) 891
PvuI CGATCG 1 cut(s) 181
RruI TCGCGA 1 cut(s) 177
RsaI GTAC 1 cut(s) 1043
RsaNI GTAC 1 cut(s) 1042
SacI GAGCTC 2 cut(s) 1012, 1221
SapI GCTCTTC 1 cut(s) 246
SaqAI TTAA 2 cut(s) 963, 1104
SatI GCNGC 5 cut(s) 57, 441, 908, 937, 991
Sau3AI GATC 6 cut(s) 28, 178, 394, 891, 1132, 1201
Sau96I GGNCC 8 cut(s) 164, 275, 340, 358, 753, 881, 1063, 1258
SchI GAGTC 2 cut(s) 166, 855
ScrFI CCNGG 4 cut(s) 255, 698, 757, 1154
SduI GDGCHC 2 cut(s) 1012, 1221
SfaNI GCATC 4 cut(s) 14, 184, 631, 1047
SfcI CTRYAG 1 cut(s) 908
SinI GGWCC 4 cut(s) 164, 275, 340, 1063
Sse9I AATT 7 cut(s) 587, 701, 716, 760, 964, 1088, 1247
SseBI AGGCCT 1 cut(s) 1149
SsiI CCGC 8 cut(s) 70, 223, 371, 434, 441, 936, 991, 1243
SspMI CTAG 5 cut(s) 423, 437, 750, 1083, 1273
SstI GAGCTC 2 cut(s) 1012, 1221
StuI AGGCCT 1 cut(s) 1149
StyD4I CCNGG 4 cut(s) 253, 696, 755, 1152
StyI CCWWGG 1 cut(s) 802
TaaI ACNGT 1 cut(s) 307
TaiI ACGT 3 cut(s) 100, 798, 999
TaqI TCGA 7 cut(s) 27, 88, 393, 480, 616, 1006, 1265
TasI AATT 7 cut(s) 587, 701, 716, 760, 964, 1088, 1247
TatI WGTACW 1 cut(s) 1041
TauI GCSGC 3 cut(s) 443, 939, 993
Tru1I TTAA 2 cut(s) 963, 1104
Tru9I TTAA 2 cut(s) 963, 1104
TscAI CASTG 4 cut(s) 52, 778, 1129, 1204
TseFI GTSAC 2 cut(s) 307, 671
TseI GCWGC 2 cut(s) 56, 907
Tsp45I GTSAC 2 cut(s) 307, 671
TspDTI ATGAA 3 cut(s) 10, 54, 1122
TspGWI ACGGA 1 cut(s) 920
TspRI CASTG 4 cut(s) 52, 778, 1129, 1204
VpaK11BI GGWCC 4 cut(s) 164, 275, 340, 1063
XapI RAATTY 3 cut(s) 701, 716, 760
XcmI CCANNNNNNNNNTGG 1 cut(s) 1177
XmiI GTMKAC 1 cut(s) 94
XmnI GAANNNNTTC 2 cut(s) 17, 1113
XspI CTAG 5 cut(s) 423, 437, 750, 1083, 1273
ZraI GACGTC 1 cut(s) 98
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.