Belongs to the oxygen-dependent FAD-linked oxidoreductase family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 144 |
| AatII | GACGTC | 1 cut(s) | 992 |
| Acc16I | TGCGCA | 1 cut(s) | 221 |
| AccBSI | CCGCTC | 1 cut(s) | 520 |
| AccI | GTMKAC | 1 cut(s) | 765 |
| AccII | CGCG | 5 cut(s) | 672, 785, 787, 922, 1011 |
| AccIII | TCCGGA | 1 cut(s) | 817 |
| AciI | CCGC | 8 cut(s) | 518, 588, 685, 792, 843, 922, 993, 1011 |
| AclWI | GGATC | 1 cut(s) | 809 |
| AcuI | CTGAAG | 1 cut(s) | 243 |
| AcyI | GRCGYC | 2 cut(s) | 696, 989 |
| AfaI | GTAC | 2 cut(s) | 516, 914 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 594, 1002 |
| AgsI | TTSAA | 2 cut(s) | 106, 353 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 969 |
| AjnI | CCWGG | 2 cut(s) | 97, 564 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 60, 92 |
| AluBI | AGCT | 2 cut(s) | 215, 333 |
| AluI | AGCT | 2 cut(s) | 215, 333 |
| Alw21I | GWGCWC | 1 cut(s) | 733 |
| Alw26I | GTCTC | 3 cut(s) | 435, 473, 707 |
| AlwI | GGATC | 1 cut(s) | 809 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 539 |
| Aor13HI | TCCGGA | 1 cut(s) | 817 |
| AoxI | GGCC | 4 cut(s) | 3, 95, 561, 1042 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 359, 391, 448, 480 |
| AspA2I | CCTAGG | 2 cut(s) | 370, 1045 |
| AspLEI | GCGC | 4 cut(s) | 222, 672, 787, 922 |
| AspS9I | GGNCC | 6 cut(s) | 4, 95, 359, 367, 562, 1042 |
| AsuHPI | GGTGA | 1 cut(s) | 662 |
| AsuNHI | GCTAGC | 1 cut(s) | 742 |
| AvaII | GGWCC | 2 cut(s) | 359, 367 |
| AvrII | CCTAGG | 2 cut(s) | 370, 1045 |
| BbsI | GAAGAC | 1 cut(s) | 956 |
| Bbv12I | GWGCWC | 1 cut(s) | 733 |
| BccI | CCATC | 5 cut(s) | 128, 593, 611, 929, 962 |
| BceAI | ACGGC | 1 cut(s) | 575 |
| BciT130I | CCWGG | 2 cut(s) | 99, 566 |
| BclI | TGATCA | 1 cut(s) | 541 |
| BcoDI | GTCTC | 3 cut(s) | 435, 473, 707 |
| BfaI | CTAG | 8 cut(s) | 371, 692, 743, 851, 1032, 1046, 1061, 1085 |
| BisI | GCNGC | 1 cut(s) | 923 |
| BlnI | CCTAGG | 2 cut(s) | 370, 1045 |
| BlsI | GCNGC | 1 cut(s) | 924 |
| Bme1390I | CCNGG | 2 cut(s) | 99, 566 |
| Bme18I | GGWCC | 2 cut(s) | 359, 367 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 969 |
| BmgT120I | GGNCC | 6 cut(s) | 4, 95, 359, 367, 562, 1042 |
| BmiI | GGNNCC | 2 cut(s) | 96, 980 |
| BmrFI | CCNGG | 2 cut(s) | 99, 566 |
| BmsI | GCATC | 1 cut(s) | 595 |
| BmtI | GCTAGC | 1 cut(s) | 746 |
| BpiI | GAAGAC | 1 cut(s) | 956 |
| BpuEI | CTTGAG | 1 cut(s) | 417 |
| Bsa29I | ATCGAT | 1 cut(s) | 126 |
| BsaAI | YACGTR | 1 cut(s) | 514 |
| BsaBI | GATNNNNATC | 1 cut(s) | 813 |
| BsaHI | GRCGYC | 2 cut(s) | 696, 989 |
| BsaI | GGTCTC | 2 cut(s) | 473, 707 |
| BsaJI | CCNNGG | 4 cut(s) | 98, 370, 564, 1045 |
| BsaWI | WCCGGW | 3 cut(s) | 361, 817, 956 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 60, 90 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 594, 1002 |
| Bse3DI | GCAATG | 1 cut(s) | 619 |
| Bse8I | GATNNNNATC | 1 cut(s) | 813 |
| BseAI | TCCGGA | 1 cut(s) | 817 |
| BseBI | CCWGG | 2 cut(s) | 99, 566 |
| BseCI | ATCGAT | 1 cut(s) | 126 |
| BseDI | CCNNGG | 4 cut(s) | 98, 370, 564, 1045 |
| BseGI | GGATG | 3 cut(s) | 191, 604, 940 |
| BseJI | GATNNNNATC | 1 cut(s) | 813 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 594, 1002 |
| BseMI | GCAATG | 1 cut(s) | 619 |
| BseMII | CTCAG | 1 cut(s) | 698 |
| BseRI | GAGGAG | 1 cut(s) | 923 |
| BseYI | CCCAGC | 3 cut(s) | 916, 1055, 1075 |
| Bsh1236I | CGCG | 5 cut(s) | 672, 785, 787, 922, 1011 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1003 |
| BshFI | GGCC | 4 cut(s) | 5, 97, 563, 1044 |
| BshVI | ATCGAT | 1 cut(s) | 126 |
| BsiEI | CGRYCG | 1 cut(s) | 1003 |
| BsiHKAI | GWGCWC | 1 cut(s) | 733 |
| BsiSI | CCGG | 3 cut(s) | 362, 818, 957 |
| BslFI | GGGAC | 2 cut(s) | 132, 484 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 594, 1002 |
| BsmAI | GTCTC | 3 cut(s) | 435, 473, 707 |
| BsmFI | GGGAC | 2 cut(s) | 132, 484 |
| BsnI | GGCC | 4 cut(s) | 5, 97, 563, 1044 |
| Bso31I | GGTCTC | 2 cut(s) | 473, 707 |
| Bsp1286I | GDGCHC | 1 cut(s) | 733 |
| Bsp13I | TCCGGA | 1 cut(s) | 817 |
| Bsp143I | GATC | 4 cut(s) | 123, 127, 541, 814 |
| BspACI | CCGC | 8 cut(s) | 518, 588, 685, 792, 843, 922, 993, 1011 |
| BspANI | GGCC | 4 cut(s) | 5, 97, 563, 1044 |
| BspCNI | CTCAG | 1 cut(s) | 699 |
| BspDI | ATCGAT | 1 cut(s) | 126 |
| BspEI | TCCGGA | 1 cut(s) | 817 |
| BspFNI | CGCG | 5 cut(s) | 672, 785, 787, 922, 1011 |
| BspHI | TCATGA | 1 cut(s) | 130 |
| BspLI | GGNNCC | 2 cut(s) | 96, 980 |
| BspOI | GCTAGC | 1 cut(s) | 746 |
| BspPI | GGATC | 1 cut(s) | 809 |
| BspTNI | GGTCTC | 2 cut(s) | 473, 707 |
| BsrBI | CCGCTC | 1 cut(s) | 520 |
| BsrDI | GCAATG | 1 cut(s) | 619 |
| BssECI | CCNNGG | 4 cut(s) | 98, 370, 564, 1045 |
| BssMI | GATC | 4 cut(s) | 123, 127, 541, 814 |
| BssNI | GRCGYC | 2 cut(s) | 696, 989 |
| BssT1I | CCWWGG | 2 cut(s) | 370, 1045 |
| Bst2UI | CCWGG | 2 cut(s) | 99, 566 |
| Bst4CI | ACNGT | 2 cut(s) | 226, 650 |
| Bst6I | CTCTTC | 1 cut(s) | 156 |
| BstACI | GRCGYC | 2 cut(s) | 696, 989 |
| BstBAI | YACGTR | 1 cut(s) | 514 |
| BstC8I | GCNNGC | 3 cut(s) | 610, 668, 744 |
| BstDEI | CTNAG | 1 cut(s) | 707 |
| BstF5I | GGATG | 3 cut(s) | 191, 604, 940 |
| BstFNI | CGCG | 5 cut(s) | 672, 785, 787, 922, 1011 |
| BstHHI | GCGC | 4 cut(s) | 222, 672, 787, 922 |
| BstKTI | GATC | 4 cut(s) | 126, 130, 544, 817 |
| BstMAI | GTCTC | 3 cut(s) | 435, 473, 707 |
| BstMBI | GATC | 4 cut(s) | 123, 127, 541, 814 |
| BstMCI | CGRYCG | 1 cut(s) | 1003 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 226, 517, 609, 1017 |
| BstNI | CCWGG | 2 cut(s) | 99, 566 |
| BstNSI | RCATGY | 1 cut(s) | 323 |
| BstSCI | CCNGG | 2 cut(s) | 97, 564 |
| BstUI | CGCG | 5 cut(s) | 672, 785, 787, 922, 1011 |
| BstV2I | GAAGAC | 1 cut(s) | 956 |
| BstX2I | RGATCY | 1 cut(s) | 814 |
| BstYI | RGATCY | 1 cut(s) | 814 |
| Bsu15I | ATCGAT | 1 cut(s) | 126 |
| BsuRI | GGCC | 4 cut(s) | 5, 97, 563, 1044 |
| BsuTUI | ATCGAT | 1 cut(s) | 126 |
| BtgZI | GCGATG | 1 cut(s) | 618 |
| BtsCI | GGATG | 3 cut(s) | 191, 604, 940 |
| BtsIMutI | CAGTG | 2 cut(s) | 222, 267 |
| Cac8I | GCNNGC | 3 cut(s) | 610, 668, 744 |
| CaiI | CAGNNNCTG | 1 cut(s) | 539 |
| CciI | TCATGA | 1 cut(s) | 130 |
| CfoI | GCGC | 4 cut(s) | 222, 672, 787, 922 |
| Cfr13I | GGNCC | 6 cut(s) | 4, 95, 359, 367, 562, 1042 |
| ClaI | ATCGAT | 1 cut(s) | 126 |
| CseI | GACGC | 2 cut(s) | 685, 791 |
| Csp6I | GTAC | 2 cut(s) | 515, 913 |
| CviAII | CATG | 9 cut(s) | 63, 91, 131, 152, 320, 388, 454, 545, 626 |
| CviQI | GTAC | 2 cut(s) | 515, 913 |
| DdeI | CTNAG | 1 cut(s) | 707 |
| DpnI | GATC | 4 cut(s) | 125, 129, 543, 816 |
| DpnII | GATC | 4 cut(s) | 123, 127, 541, 814 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 144 |
| DriI | GACNNNNNGTC | 1 cut(s) | 969 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 144 |
| Eam1104I | CTCTTC | 1 cut(s) | 156 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 969 |
| EarI | CTCTTC | 1 cut(s) | 156 |
| EciI | GGCGGA | 2 cut(s) | 577, 982 |
| Eco130I | CCWWGG | 2 cut(s) | 370, 1045 |
| Eco31I | GGTCTC | 2 cut(s) | 473, 707 |
| Eco47I | GGWCC | 2 cut(s) | 359, 367 |
| Eco57I | CTGAAG | 1 cut(s) | 243 |
| EcoO109I | RGGNCCY | 3 cut(s) | 95, 367, 562 |
| EcoRII | CCWGG | 2 cut(s) | 97, 564 |
| EcoT14I | CCWWGG | 2 cut(s) | 370, 1045 |
| ErhI | CCWWGG | 2 cut(s) | 370, 1045 |
| FaeI | CATG | 9 cut(s) | 66, 94, 134, 155, 323, 391, 457, 548, 629 |
| FaqI | GGGAC | 2 cut(s) | 132, 484 |
| FatI | CATG | 9 cut(s) | 62, 90, 130, 151, 319, 387, 453, 544, 625 |
| FauI | CCCGC | 1 cut(s) | 1004 |
| FbaI | TGATCA | 1 cut(s) | 541 |
| FblI | GTMKAC | 1 cut(s) | 765 |
| Fnu4HI | GCNGC | 1 cut(s) | 923 |
| FokI | GGATG | 3 cut(s) | 178, 611, 947 |
| Fsp4HI | GCNGC | 1 cut(s) | 923 |
| FspAI | RTGCGCAY | 1 cut(s) | 221 |
| FspBI | CTAG | 8 cut(s) | 371, 692, 743, 851, 1032, 1046, 1061, 1085 |
| FspI | TGCGCA | 1 cut(s) | 221 |
| GlaI | GCGC | 4 cut(s) | 221, 671, 786, 921 |
| GluI | GCNGC | 1 cut(s) | 923 |
| GsaI | CCCAGC | 3 cut(s) | 920, 1059, 1079 |
| HaeIII | GGCC | 4 cut(s) | 5, 97, 563, 1044 |
| HapII | CCGG | 3 cut(s) | 362, 818, 957 |
| HgaI | GACGC | 2 cut(s) | 685, 791 |
| HhaI | GCGC | 4 cut(s) | 222, 672, 787, 922 |
| Hin1I | GRCGYC | 2 cut(s) | 696, 989 |
| Hin1II | CATG | 9 cut(s) | 66, 94, 134, 155, 323, 391, 457, 548, 629 |
| Hin6I | GCGC | 4 cut(s) | 220, 670, 785, 920 |
| HinP1I | GCGC | 4 cut(s) | 220, 670, 785, 920 |
| HincII | GTYRAC | 1 cut(s) | 553 |
| HindII | GTYRAC | 1 cut(s) | 553 |
| HinfI | GANTC | 8 cut(s) | 14, 302, 449, 464, 536, 660, 703, 724 |
| HpaII | CCGG | 3 cut(s) | 362, 818, 957 |
| HphI | GGTGA | 1 cut(s) | 662 |
| Hpy166II | GTNNAC | 3 cut(s) | 553, 766, 929 |
| Hpy188I | TCNGA | 8 cut(s) | 247, 307, 463, 478, 496, 541, 708, 907 |
| Hpy188III | TCNNGA | 6 cut(s) | 131, 400, 700, 818, 881, 946 |
| Hpy8I | GTNNAC | 3 cut(s) | 553, 766, 929 |
| Hpy99I | CGWCG | 5 cut(s) | 288, 596, 650, 701, 785 |
| HpyAV | CCTTC | 5 cut(s) | 264, 479, 754, 880, 1006 |
| HpyCH4III | ACNGT | 2 cut(s) | 226, 650 |
| HpyCH4IV | ACGT | 3 cut(s) | 40, 513, 989 |
| HpyCH4V | TGCA | 3 cut(s) | 229, 608, 1020 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 226, 517, 609, 1017 |
| HpyF3I | CTNAG | 1 cut(s) | 707 |
| HpySE526I | ACGT | 3 cut(s) | 40, 513, 989 |
| Hsp92I | GRCGYC | 2 cut(s) | 696, 989 |
| Hsp92II | CATG | 9 cut(s) | 66, 94, 134, 155, 323, 391, 457, 548, 629 |
| HspAI | GCGC | 4 cut(s) | 220, 670, 785, 920 |
| Kpn2I | TCCGGA | 1 cut(s) | 817 |
| Ksp22I | TGATCA | 1 cut(s) | 541 |
| Kzo9I | GATC | 4 cut(s) | 123, 127, 541, 814 |
| LmnI | GCTCC | 2 cut(s) | 580, 984 |
| LweI | GCATC | 1 cut(s) | 595 |
| MaeI | CTAG | 8 cut(s) | 371, 692, 743, 851, 1032, 1046, 1061, 1085 |
| MaeII | ACGT | 3 cut(s) | 40, 513, 989 |
| MaeIII | GTNAC | 2 cut(s) | 650, 776 |
| MalI | GATC | 4 cut(s) | 125, 129, 543, 816 |
| MbiI | CCGCTC | 1 cut(s) | 520 |
| MboI | GATC | 4 cut(s) | 123, 127, 541, 814 |
| MboII | GAAGA | 5 cut(s) | 173, 179, 249, 426, 961 |
| MfeI | CAATTG | 1 cut(s) | 501 |
| MflI | RGATCY | 1 cut(s) | 814 |
| MhlI | GDGCHC | 1 cut(s) | 733 |
| MluCI | AATT | 2 cut(s) | 267, 501 |
| MlyI | GAGTC | 3 cut(s) | 311, 458, 545 |
| MmeI | TCCRAC | 2 cut(s) | 225, 1006 |
| MroI | TCCGGA | 1 cut(s) | 817 |
| MspI | CCGG | 3 cut(s) | 362, 818, 957 |
| MspR9I | CCNGG | 2 cut(s) | 99, 566 |
| MunI | CAATTG | 1 cut(s) | 501 |
| MvaI | CCWGG | 2 cut(s) | 99, 566 |
| MvnI | CGCG | 5 cut(s) | 672, 785, 787, 922, 1011 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 226, 517, 609, 1017 |
| NdeII | GATC | 4 cut(s) | 123, 127, 541, 814 |
| NheI | GCTAGC | 1 cut(s) | 742 |
| NlaIII | CATG | 9 cut(s) | 66, 94, 134, 155, 323, 391, 457, 548, 629 |
| NlaIV | GGNNCC | 2 cut(s) | 96, 980 |
| NmuCI | GTSAC | 1 cut(s) | 650 |
| NsbI | TGCGCA | 1 cut(s) | 221 |
| NspI | RCATGY | 1 cut(s) | 323 |
| PagI | TCATGA | 1 cut(s) | 130 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 600 |
| PfeI | GAWTC | 5 cut(s) | 14, 464, 660, 703, 724 |
| PkrI | GCNGC | 1 cut(s) | 924 |
| PleI | GAGTC | 3 cut(s) | 310, 457, 544 |
| PpsI | GAGTC | 3 cut(s) | 310, 457, 544 |
| Ppu21I | YACGTR | 1 cut(s) | 514 |
| PpuMI | RGGWCCY | 1 cut(s) | 367 |
| Psp5II | RGGWCCY | 1 cut(s) | 367 |
| Psp6I | CCWGG | 2 cut(s) | 97, 564 |
| PspFI | CCCAGC | 3 cut(s) | 916, 1055, 1075 |
| PspGI | CCWGG | 2 cut(s) | 97, 564 |
| PspN4I | GGNNCC | 2 cut(s) | 96, 980 |
| PspPI | GGNCC | 6 cut(s) | 4, 95, 359, 367, 562, 1042 |
| PspPPI | RGGWCCY | 1 cut(s) | 367 |
| PstNI | CAGNNNCTG | 1 cut(s) | 539 |
| PsuI | RGATCY | 1 cut(s) | 814 |
| RsaI | GTAC | 2 cut(s) | 516, 914 |
| RsaNI | GTAC | 2 cut(s) | 515, 913 |
| SatI | GCNGC | 1 cut(s) | 923 |
| Sau3AI | GATC | 4 cut(s) | 123, 127, 541, 814 |
| Sau96I | GGNCC | 6 cut(s) | 4, 95, 359, 367, 562, 1042 |
| SchI | GAGTC | 3 cut(s) | 311, 458, 545 |
| ScrFI | CCNGG | 2 cut(s) | 99, 566 |
| SduI | GDGCHC | 1 cut(s) | 733 |
| SfaNI | GCATC | 1 cut(s) | 595 |
| SinI | GGWCC | 2 cut(s) | 359, 367 |
| SmlI | CTYRAG | 1 cut(s) | 432 |
| SmoI | CTYRAG | 1 cut(s) | 432 |
| Sse9I | AATT | 2 cut(s) | 267, 501 |
| SsiI | CCGC | 8 cut(s) | 518, 588, 685, 792, 843, 922, 993, 1011 |
| SspMI | CTAG | 8 cut(s) | 371, 692, 743, 851, 1032, 1046, 1061, 1085 |
| StyD4I | CCNGG | 2 cut(s) | 97, 564 |
| StyI | CCWWGG | 2 cut(s) | 370, 1045 |
| TaaI | ACNGT | 2 cut(s) | 226, 650 |
| TaiI | ACGT | 3 cut(s) | 43, 516, 992 |
| TaqI | TCGA | 3 cut(s) | 21, 126, 874 |
| TaqII | GACCGA | 2 cut(s) | 497, 989 |
| TasI | AATT | 2 cut(s) | 267, 501 |
| TauI | GCSGC | 1 cut(s) | 925 |
| TfiI | GAWTC | 5 cut(s) | 14, 464, 660, 703, 724 |
| TscAI | CASTG | 2 cut(s) | 229, 267 |
| TseFI | GTSAC | 1 cut(s) | 650 |
| Tsp45I | GTSAC | 1 cut(s) | 650 |
| TspDTI | ATGAA | 3 cut(s) | 44, 404, 642 |
| TspGWI | ACGGA | 2 cut(s) | 760, 1000 |
| TspRI | CASTG | 2 cut(s) | 229, 267 |
| VpaK11BI | GGWCC | 2 cut(s) | 359, 367 |
| XceI | RCATGY | 1 cut(s) | 323 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 331 |
| XmaJI | CCTAGG | 2 cut(s) | 370, 1045 |
| XmiI | GTMKAC | 1 cut(s) | 765 |
| XspI | CTAG | 8 cut(s) | 371, 692, 743, 851, 1032, 1046, 1061, 1085 |
| ZraI | GACGTC | 1 cut(s) | 990 |