Rmu_sc0002553.1_g000017

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002553.1
OG0000172
Physical Location & Seq
Reverse (-)
98900 .. 100093
1194 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002553.1_g000017.1.cds

Sequence Viewer

Length: 1194 bp
atgacagccaggctagcgaccaagttgtcgctcagagagggtgaggaaccggttgacctgggaaaccttagggttccggggaaggaatttctcgctagccgtttctacttggtggggaaactcaacacttgtagggcggtggttttggattcttttaggagcgcggtgcgttcaatgtggagattgacggggactgtggaggttcaaccacgcggggaccgttttctgtttacgttcactcttgaacgtgatgtcgcccgggtgaagaagggaggcccttggagttttcagagggctatgcttttgttgaatgactacgatggcttttcagtgattgatgcggtgaagcttgacttcgtttggatctgggttgggatccacggccttccaccgggtatcttgacggaacccactgtccggctggtgggcggaacaatcggtgaggtcttggaggttgatcaaccggctatccgacgtggtgatgctcgggttcggattactttggccatcaatgatctggtgtgtttggatcgtcgtgttagggtttcgcccactgatgttctcactttgaggtttcagtatgagaggttattgggaaggtgccgactgtgtactttcttgaaccacggaggacagaggtgttcaagggaggaggtggaggcgactgactctgtggtggacgatggttcgcagcaggttccgaggctggctcttccagggcttgtgtttagggctaattcccagccatctctttccttgccttcgaatttcaaggtcccaactctgttgaagaagaaaccagtgcagattcgtcctctcccggaggtggaatcttcgcttgggtctgaagatacctcggctcttgaccctgtggttggaatgcgtcgccctagggaagaggaggatgaggagggtggaaaacgagctaaacatagcctagctttggttcctggcattctgcaaccggagaacctcgggctggaattctcacctgagggtttggtggaggtgaaggtaacgtcgcctcccaaagtgtacaagaagaagggcaggcctcgaggacatagaaataaggtcaagaaggtgatgtctatgagtgagggttcggggtccatggtcattcctgaggatggcgttggtagtgctcctggacttgagggagcgccgactcctccagattccagcgctgtttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

397

Amino Acids

43.69

Weight (kDa)

9.26

Isoelectric Point (pI)

46.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000172)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G59650 AT3G59650
fragaria_vesca FvH4_1g19981 FvH4_1g22221 FvH4_2g13530 FvH4_2g13791 FvH4_2g14332 FvH4_2g14911 FvH4_2g16332 FvH4_3g10980 FvH4_3g11141 FvH4_3g14171 FvH4_3g26311 FvH4_3g28254 FvH4_3g29741 FvH4_4g05261 FvH4_4g12002 FvH4_4g13371 FvH4_4g15541 FvH4_4g18531 FvH4_5g02661 FvH4_5g02662 FvH4_5g16791 FvH4_5g29700 FvH4_5g35881 FvH4_5g37061 FvH4_6g01571 FvH4_6g12761 FvH4_6g14961 FvH4_6g20381 FvH4_6g22001 FvH4_6g23673 FvH4_6g23960 FvH4_6g28051 FvH4_6g31094 FvH4_6g36541 FvH4_7g00911 FvH4_7g06200 FvH4_7g06200 FvH4_7g09551
malus_domestica MD08G1230600.v1.1
prunus_persica Prupe.1G206900_v2.0.a1 Prupe.1G206900_v2.0.a1 Prupe.1G206900_v2.0.a1
pyrus_communis pycom08g20050 pycom15g37590
rosa_chinensis RchiOBHm_Chr1g0333831 RchiOBHm_Chr1g0344871 RchiOBHm_Chr3g0473241 RchiOBHm_Chr5g0018871 RchiOBHm_Chr6g0265791
rosa_laevigata RLG00000005720 RLG00000012718 RLG00000027174 RLG00000029225 RLG00000029527
rosa_multiflora Rmu_co8002714.1_g000001 Rmu_co8072270.1_g000001 Rmu_co8095594.1_g000001 Rmu_co8308871.1_g000001 Rmu_co8398699.1_g000001 Rmu_co8404287.1_g000001 Rmu_sc0000035.1_g000010 Rmu_sc0000133.1_g000007 Rmu_sc0000253.1_g000023 Rmu_sc0000308.1_g000010 Rmu_sc0000309.1_g000030 Rmu_sc0000515.1_g000015 Rmu_sc0000865.1_g000001 Rmu_sc0000889.1_g000005 Rmu_sc0001262.1_g000011 Rmu_sc0001518.1_g000013 Rmu_sc0001533.1_g000006 Rmu_sc0001547.1_g000007 Rmu_sc0001826.1_g000013 Rmu_sc0002060.1_g000017 Rmu_sc0002129.1_g000005 Rmu_sc0002449.1_g000016 Rmu_sc0002460.1_g000036 Rmu_sc0002475.1_g000014 Rmu_sc0002553.1_g000017 Rmu_sc0002759.1_g000033 Rmu_sc0002918.1_g000009 Rmu_sc0002955.1_g000020 Rmu_sc0003094.1_g000010 Rmu_sc0003669.1_g000009 Rmu_sc0004109.1_g000008 Rmu_sc0004350.1_g000007 Rmu_sc0004542.1_g000018 Rmu_sc0004967.1_g000005 Rmu_sc0005026.1_g000005 Rmu_sc0005369.1_g000013 Rmu_sc0005400.1_g000025 Rmu_sc0005420.1_g000006 Rmu_sc0005467.1_g000013 Rmu_sc0005497.1_g000003 Rmu_sc0005607.1_g000023 Rmu_sc0005949.1_g000008 Rmu_sc0005970.1_g000002 Rmu_sc0006452.1_g000001 Rmu_sc0006720.1_g000008 Rmu_sc0006867.1_g000004 Rmu_sc0007177.1_g000006 Rmu_sc0007199.1_g000011 Rmu_sc0007783.1_g000004 Rmu_sc0007885.1_g000006 Rmu_sc0008619.1_g000001 Rmu_sc0008709.1_g000004 Rmu_sc0008709.1_g000005 Rmu_sc0009185.1_g000029 Rmu_sc0010244.1_g000010 Rmu_sc0011610.1_g000005 Rmu_sc0011680.1_g000013 Rmu_sc0012075.1_g000003 Rmu_sc0012278.1_g000001 Rmu_sc0012628.1_g000001 Rmu_sc0018485.1_g000006 Rmu_sc0019960.1_g000001 Rmu_sc0020177.1_g000002 Rmu_sc0020656.1_g000001 Rmu_sc0021333.1_g000003 Rmu_sc0023170.1_g000002 Rmu_sc0023989.1_g000005 Rmu_sc0025259.1_g000001 Rmu_sc0025350.1_g000013 Rmu_sc0029678.1_g000002 Rmu_sc0035939.1_g000001 Rmu_sc0039260.1_g000001 Rmu_sc0039886.1_g000001 Rmu_ssc0000323.1_g000030 Rmu_ssc0000333.1_g000005 Rmu_ssc0000471.1_g000017 Rmu_ssc0000480.1_g000025
rosa_roxburghii Rroxscaffold_1G00006060 Rroxscaffold_1G00048570 Rroxscaffold_1G00057650 Rroxscaffold_1G00072720 Rroxscaffold_4G00281190 Rroxscaffold_4G00317160 Rroxscaffold_6G00411570
rosa_rugosa Rorug01G0004800 Rorug01G0112100 Rorug01G0206100 Rorug02G0324000 Rorug05G0305600 Rorug05G0326800 Rorug06G0018900 Rorug06G0167000 Rorug07G0031200 Rorug07G0071900
rosa_samantha Rh1AG134700 Rh1BG103000 Rh1CG007300 Rh1CG128100 Rh1DG140100 Rh2DG579500 Rh3DG199000 Rh4BG252500 Rh5AG374900 Rh5BG146800 Rh5BG151500 Rh5DG399700
rosa_wichuraiana Rw0G001820 Rw1G011230 Rw1G011240 Rw1G027290 Rw2G011670 Rw2G039270 Rw6G018440 Rw6G023120 Rw7G025180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 25
AbsI CCTCGAGG 1 cut(s) 1056
Acc36I ACCTGC 1 cut(s) 685
AccB1I GGYRCC 1 cut(s) 600
AccII CGCG 2 cut(s) 164, 213
AciI CCGC 5 cut(s) 137, 164, 213, 341, 429
AclWI GGATC 4 cut(s) 370, 371, 383, 537
AcoI YGGCCR 1 cut(s) 504
AcsI RAATTY 3 cut(s) 86, 766, 983
AcuI CTGAAG 1 cut(s) 867
AfaI GTAC 2 cut(s) 613, 1037
AfeI AGCGCT 1 cut(s) 1186
AfiI CCNNNNNNNGG 8 cut(s) 391, 417, 424, 826, 875, 943, 979, 1130
AgeI ACCGGT 1 cut(s) 49
AgsI TTSAA 8 cut(s) 174, 206, 245, 310, 622, 645, 772, 790
AjiI CACGTC 1 cut(s) 476
AjnI CCWGG 5 cut(s) 8, 57, 715, 949, 1147
AjuI GAANNNNNNNTTGG 2 cut(s) 822, 854
AloI GAACNNNNNNTCC 2 cut(s) 399, 431
AluBI AGCT 3 cut(s) 349, 926, 941
AluI AGCT 3 cut(s) 349, 926, 941
Alw21I GWGCWC 1 cut(s) 1147
AlwI GGATC 4 cut(s) 370, 371, 383, 537
Ama87I CYCGRG 4 cut(s) 258, 486, 974, 1056
Aor51HI AGCGCT 1 cut(s) 1186
AoxI GGCC 4 cut(s) 274, 382, 504, 1052
ApeKI GCWGC 1 cut(s) 691
ApoI RAATTY 3 cut(s) 86, 766, 983
AsiGI ACCGGT 1 cut(s) 49
AspA2I CCTAGG 1 cut(s) 890
AspLEI GCGC 3 cut(s) 164, 1165, 1187
AspS9I GGNCC 4 cut(s) 217, 275, 775, 1110
AsuC2I CCSGG 5 cut(s) 78, 259, 260, 393, 821
AsuHPI GGTGA 8 cut(s) 53, 274, 355, 452, 491, 981, 1021, 1096
AsuII TTCGAA 1 cut(s) 764
AsuNHI GCTAGC 2 cut(s) 13, 95
AvaI CYCGRG 4 cut(s) 258, 486, 974, 1056
AvaII GGWCC 3 cut(s) 217, 775, 1110
AvrII CCTAGG 1 cut(s) 890
AxyI CCTNAGG 3 cut(s) 68, 993, 1125
BalI TGGCCA 1 cut(s) 506
BamHI GGATCC 1 cut(s) 375
BanI GGYRCC 1 cut(s) 600
Bbv12I GWGCWC 1 cut(s) 1147
BbvI GCAGC 1 cut(s) 703
BccI CCATC 5 cut(s) 314, 515, 677, 754, 1124
BceAI ACGGC 2 cut(s) 84, 397
BciT130I CCWGG 5 cut(s) 10, 59, 717, 951, 1149
BclI TGATCA 1 cut(s) 457
BcnI CCSGG 5 cut(s) 78, 259, 260, 393, 821
BfaI CTAG 4 cut(s) 14, 96, 891, 938
BfoI RGCGCY 2 cut(s) 1166, 1188
BfuAI ACCTGC 1 cut(s) 685
BisI GCNGC 1 cut(s) 692
BlnI CCTAGG 1 cut(s) 890
BlsI GCNGC 1 cut(s) 693
Bme18I GGWCC 3 cut(s) 217, 775, 1110
BmeT110I CYCGRG 4 cut(s) 258, 486, 974, 1056
BmgBI CACGTC 1 cut(s) 476
BmgT120I GGNCC 4 cut(s) 217, 275, 775, 1110
BmsI GCATC 2 cut(s) 328, 472
BmtI GCTAGC 2 cut(s) 17, 99
BplI GAGNNNNNCTC 2 cut(s) 694, 726
BpmI CTGGAG 1 cut(s) 1158
Bpu14I TTCGAA 1 cut(s) 764
BpuEI CTTGAG 1 cut(s) 1175
BpuMI CCSGG 5 cut(s) 78, 259, 260, 393, 821
BsaWI WCCGGW 2 cut(s) 49, 964
BsaXI ACNNNNNCTCC 2 cut(s) 1009, 1039
Bsc4I CCNNNNNNNGG 8 cut(s) 391, 417, 424, 826, 875, 943, 979, 1130
Bse118I RCCGGY 2 cut(s) 49, 463
Bse1I ACTGG 1 cut(s) 800
Bse21I CCTNAGG 3 cut(s) 68, 993, 1125
BseBI CCWGG 5 cut(s) 10, 59, 717, 951, 1149
BseGI GGATG 2 cut(s) 910, 1135
BseLI CCNNNNNNNGG 8 cut(s) 391, 417, 424, 826, 875, 943, 979, 1130
BseMII CTCAG 3 cut(s) 46, 984, 1116
BseNI ACTGG 1 cut(s) 800
BseRI GAGGAG 4 cut(s) 665, 914, 923, 1161
BseXI GCAGC 1 cut(s) 703
BseYI CCCAGC 1 cut(s) 741
BsgI GTGCAG 1 cut(s) 824
Bsh1236I CGCG 2 cut(s) 164, 213
BshFI GGCC 4 cut(s) 276, 384, 506, 1054
BshNI GGYRCC 1 cut(s) 600
BshTI ACCGGT 1 cut(s) 49
BsiHKAI GWGCWC 1 cut(s) 1147
BsiHKCI CYCGRG 4 cut(s) 258, 486, 974, 1056
BsiSI CCGG 8 cut(s) 50, 77, 259, 392, 418, 464, 821, 965
BslFI GGGAC 3 cut(s) 205, 230, 761
BslI CCNNNNNNNGG 8 cut(s) 391, 417, 424, 826, 875, 943, 979, 1130
BsmFI GGGAC 3 cut(s) 205, 230, 761
BsmI GAATGC 2 cut(s) 885, 954
BsnI GGCC 4 cut(s) 276, 384, 506, 1054
BsoBI CYCGRG 4 cut(s) 258, 486, 974, 1056
Bsp119I TTCGAA 1 cut(s) 764
Bsp1286I GDGCHC 1 cut(s) 1147
Bsp1407I TGTACA 1 cut(s) 1035
Bsp143I GATC 5 cut(s) 363, 375, 457, 514, 529
Bsp19I CCATGG 1 cut(s) 1113
BspACI CCGC 5 cut(s) 137, 164, 213, 341, 429
BspANI GGCC 4 cut(s) 276, 384, 506, 1054
BspCNI CTCAG 3 cut(s) 45, 985, 1117
BspFNI CGCG 2 cut(s) 164, 213
BspMI ACCTGC 1 cut(s) 685
BspOI GCTAGC 2 cut(s) 17, 99
BspPI GGATC 4 cut(s) 370, 371, 383, 537
BspQI GCTCTTC 1 cut(s) 717
BspT104I TTCGAA 1 cut(s) 764
BspT107I GGYRCC 1 cut(s) 600
BsrFI RCCGGY 2 cut(s) 49, 463
BsrGI TGTACA 1 cut(s) 1035
BsrI ACTGG 1 cut(s) 800
BssAI RCCGGY 2 cut(s) 49, 463
BssMI GATC 5 cut(s) 363, 375, 457, 514, 529
BssT1I CCWWGG 3 cut(s) 278, 890, 1113
Bst2UI CCWGG 5 cut(s) 10, 59, 717, 951, 1149
Bst4CI ACNGT 4 cut(s) 196, 221, 415, 609
Bst6I CTCTTC 2 cut(s) 717, 891
BstAUI TGTACA 1 cut(s) 1035
BstBI TTCGAA 1 cut(s) 764
BstC8I GCNNGC 4 cut(s) 15, 97, 708, 1052
BstDEI CTNAG 4 cut(s) 32, 68, 993, 1125
BstDSI CCRYGG 3 cut(s) 379, 625, 1113
BstF5I GGATG 2 cut(s) 910, 1135
BstFNI CGCG 2 cut(s) 164, 213
BstH2I RGCGCY 2 cut(s) 1166, 1188
BstHHI GCGC 3 cut(s) 164, 1165, 1187
BstKTI GATC 5 cut(s) 366, 378, 460, 517, 532
BstMBI GATC 5 cut(s) 363, 375, 457, 514, 529
BstMWI GCNNNNNNNGC 1 cut(s) 14
BstNI CCWGG 5 cut(s) 10, 59, 717, 951, 1149
BstUI CGCG 2 cut(s) 164, 213
BstV1I GCAGC 1 cut(s) 703
BstX2I RGATCY 2 cut(s) 363, 375
BstYI RGATCY 2 cut(s) 363, 375
Bsu36I CCTNAGG 3 cut(s) 68, 993, 1125
BsuRI GGCC 4 cut(s) 276, 384, 506, 1054
BtgI CCRYGG 3 cut(s) 379, 625, 1113
BtrI CACGTC 1 cut(s) 476
BtsCI GGATG 2 cut(s) 910, 1135
BtsIMutI CAGTG 4 cut(s) 336, 411, 552, 807
BveI ACCTGC 1 cut(s) 685
Cac8I GCNNGC 4 cut(s) 15, 97, 708, 1052
CfoI GCGC 3 cut(s) 164, 1165, 1187
Cfr10I RCCGGY 2 cut(s) 49, 463
Cfr13I GGNCC 4 cut(s) 217, 275, 775, 1110
Cfr9I CCCGGG 1 cut(s) 258
CseI GACGC 1 cut(s) 872
Csp6I GTAC 2 cut(s) 612, 1036
CspAI ACCGGT 1 cut(s) 49
CviAII CATG 1 cut(s) 1114
CviQI GTAC 2 cut(s) 612, 1036
DdeI CTNAG 4 cut(s) 32, 68, 993, 1125
DpnI GATC 5 cut(s) 365, 377, 459, 516, 531
DpnII GATC 5 cut(s) 363, 375, 457, 514, 529
DrdI GACNNNNNNGTC 1 cut(s) 25
DseDI GACNNNNNNGTC 1 cut(s) 25
EaeI YGGCCR 1 cut(s) 504
Eam1104I CTCTTC 2 cut(s) 717, 891
EarI CTCTTC 2 cut(s) 717, 891
EciI GGCGGA 1 cut(s) 444
Eco130I CCWWGG 3 cut(s) 278, 890, 1113
Eco147I AGGCCT 1 cut(s) 1054
Eco47I GGWCC 3 cut(s) 217, 775, 1110
Eco47III AGCGCT 1 cut(s) 1186
Eco57I CTGAAG 1 cut(s) 867
Eco81I CCTNAGG 3 cut(s) 68, 993, 1125
Eco88I CYCGRG 4 cut(s) 258, 486, 974, 1056
EcoO109I RGGNCCY 2 cut(s) 275, 775
EcoRI GAATTC 1 cut(s) 983
EcoRII CCWGG 5 cut(s) 8, 57, 715, 949, 1147
EcoT14I CCWWGG 3 cut(s) 278, 890, 1113
ErhI CCWWGG 3 cut(s) 278, 890, 1113
FaeI CATG 1 cut(s) 1117
FaiI YATR 6 cut(s) 299, 582, 933, 1065, 1094, 1115
FalI AAGNNNNNCTT 2 cut(s) 338, 370
FaqI GGGAC 3 cut(s) 205, 230, 761
FatI CATG 1 cut(s) 1113
FauI CCCGC 1 cut(s) 206
FbaI TGATCA 1 cut(s) 457
Fnu4HI GCNGC 1 cut(s) 692
FokI GGATG 2 cut(s) 917, 1142
Fsp4HI GCNGC 1 cut(s) 692
FspBI CTAG 4 cut(s) 14, 96, 891, 938
GlaI GCGC 3 cut(s) 163, 1164, 1186
GluI GCNGC 1 cut(s) 692
GsaI CCCAGC 1 cut(s) 745
GsuI CTGGAG 1 cut(s) 1158
HaeII RGCGCY 2 cut(s) 1166, 1188
HaeIII GGCC 4 cut(s) 276, 384, 506, 1054
HapII CCGG 8 cut(s) 50, 77, 259, 392, 418, 464, 821, 965
HgaI GACGC 1 cut(s) 872
HhaI GCGC 3 cut(s) 164, 1165, 1187
Hin1II CATG 1 cut(s) 1117
Hin6I GCGC 3 cut(s) 162, 1163, 1185
HinP1I GCGC 3 cut(s) 162, 1163, 1185
HincII GTYRAC 1 cut(s) 55
HindII GTYRAC 1 cut(s) 55
HindIII AAGCTT 1 cut(s) 347
HinfI GANTC 6 cut(s) 149, 668, 808, 830, 1168, 1178
HpaII CCGG 8 cut(s) 50, 77, 259, 392, 418, 464, 821, 965
HphI GGTGA 8 cut(s) 53, 274, 355, 452, 491, 981, 1021, 1096
Hpy166II GTNNAC 6 cut(s) 55, 231, 237, 612, 679, 1036
Hpy188I TCNGA 6 cut(s) 35, 291, 473, 495, 702, 847
Hpy188III TCNNGA 7 cut(s) 242, 400, 619, 863, 1078, 1124, 1175
Hpy8I GTNNAC 6 cut(s) 55, 231, 237, 612, 679, 1036
Hpy99I CGWCG 4 cut(s) 477, 537, 888, 1024
HpyAV CCTTC 8 cut(s) 76, 262, 395, 591, 771, 1006, 1039, 1075
HpyCH4III ACNGT 4 cut(s) 196, 221, 415, 609
HpyCH4IV ACGT 4 cut(s) 233, 247, 475, 1019
HpyCH4V TGCA 2 cut(s) 805, 961
HpyF10VI GCNNNNNNNGC 1 cut(s) 14
HpyF3I CTNAG 4 cut(s) 32, 68, 993, 1125
HpySE526I ACGT 4 cut(s) 233, 247, 475, 1019
Hsp92II CATG 1 cut(s) 1117
HspAI GCGC 3 cut(s) 162, 1163, 1185
Ksp22I TGATCA 1 cut(s) 457
Kzo9I GATC 5 cut(s) 363, 375, 457, 514, 529
LguI GCTCTTC 1 cut(s) 717
LmnI GCTCC 3 cut(s) 159, 1150, 1160
Lsp1109I GCAGC 1 cut(s) 703
LweI GCATC 2 cut(s) 328, 472
MaeI CTAG 4 cut(s) 14, 96, 891, 938
MaeII ACGT 4 cut(s) 233, 247, 475, 1019
MaeIII GTNAC 1 cut(s) 1015
MalI GATC 5 cut(s) 365, 377, 459, 516, 531
MboI GATC 5 cut(s) 363, 375, 457, 514, 529
MboII GAAGA 8 cut(s) 277, 704, 802, 805, 825, 860, 908, 1054
MflI RGATCY 2 cut(s) 363, 375
MhlI GDGCHC 1 cut(s) 1147
MlsI TGGCCA 1 cut(s) 506
MluCI AATT 4 cut(s) 86, 736, 766, 983
MluNI TGGCCA 1 cut(s) 506
MlyI GAGTC 2 cut(s) 662, 1162
MmeI TCCRAC 2 cut(s) 496, 856
Mox20I TGGCCA 1 cut(s) 506
MscI TGGCCA 1 cut(s) 506
Msp20I TGGCCA 1 cut(s) 506
MspI CCGG 8 cut(s) 50, 77, 259, 392, 418, 464, 821, 965
Mva1269I GAATGC 2 cut(s) 885, 954
MvaI CCWGG 5 cut(s) 10, 59, 717, 951, 1149
MvnI CGCG 2 cut(s) 164, 213
MwoI GCNNNNNNNGC 1 cut(s) 14
NciI CCSGG 5 cut(s) 78, 259, 260, 393, 821
NcoI CCATGG 1 cut(s) 1113
NdeII GATC 5 cut(s) 363, 375, 457, 514, 529
NheI GCTAGC 2 cut(s) 13, 95
NlaIII CATG 1 cut(s) 1117
NmeAIII GCCGAG 1 cut(s) 836
NspV TTCGAA 1 cut(s) 764
PaeR7I CTCGAG 1 cut(s) 1056
PceI AGGCCT 1 cut(s) 1054
PciSI GCTCTTC 1 cut(s) 717
PcsI WCGNNNNNNNCGW 1 cut(s) 217
PctI GAATGC 2 cut(s) 885, 954
PfeI GAWTC 4 cut(s) 149, 808, 830, 1178
PfoI TCCNGGA 2 cut(s) 819, 1147
PinAI ACCGGT 1 cut(s) 49
PkrI GCNGC 1 cut(s) 693
PleI GAGTC 2 cut(s) 662, 1162
PpsI GAGTC 2 cut(s) 662, 1162
PpuMI RGGWCCY 1 cut(s) 775
Psp5II RGGWCCY 1 cut(s) 775
Psp6I CCWGG 5 cut(s) 8, 57, 715, 949, 1147
PspFI CCCAGC 1 cut(s) 741
PspGI CCWGG 5 cut(s) 8, 57, 715, 949, 1147
PspPI GGNCC 4 cut(s) 217, 275, 775, 1110
PspPPI RGGWCCY 1 cut(s) 775
PspXI VCTCGAGB 1 cut(s) 1056
PsuI RGATCY 2 cut(s) 363, 375
RsaI GTAC 2 cut(s) 613, 1037
RsaNI GTAC 2 cut(s) 612, 1036
SapI GCTCTTC 1 cut(s) 717
SatI GCNGC 1 cut(s) 692
Sau3AI GATC 5 cut(s) 363, 375, 457, 514, 529
Sau96I GGNCC 4 cut(s) 217, 275, 775, 1110
SchI GAGTC 2 cut(s) 662, 1162
SduI GDGCHC 1 cut(s) 1147
SfaNI GCATC 2 cut(s) 328, 472
Sfr274I CTCGAG 1 cut(s) 1056
SfuI TTCGAA 1 cut(s) 764
SinI GGWCC 3 cut(s) 217, 775, 1110
SlaI CTCGAG 1 cut(s) 1056
SmaI CCCGGG 1 cut(s) 260
SmlI CTYRAG 2 cut(s) 1056, 1154
SmoI CTYRAG 2 cut(s) 1056, 1154
Sse9I AATT 4 cut(s) 86, 736, 766, 983
SseBI AGGCCT 1 cut(s) 1054
SsiI CCGC 5 cut(s) 137, 164, 213, 341, 429
SspMI CTAG 4 cut(s) 14, 96, 891, 938
StuI AGGCCT 1 cut(s) 1054
StyI CCWWGG 3 cut(s) 278, 890, 1113
TaaI ACNGT 4 cut(s) 196, 221, 415, 609
TaiI ACGT 4 cut(s) 236, 250, 478, 1022
TaqI TCGA 2 cut(s) 764, 1057
TasI AATT 4 cut(s) 86, 736, 766, 983
TatI WGTACW 2 cut(s) 611, 1035
TfiI GAWTC 4 cut(s) 149, 808, 830, 1178
TscAI CASTG 4 cut(s) 336, 418, 559, 807
TseI GCWGC 1 cut(s) 691
TspGWI ACGGA 2 cut(s) 419, 642
TspMI CCCGGG 1 cut(s) 258
TspRI CASTG 4 cut(s) 336, 418, 559, 807
VpaK11BI GGWCC 3 cut(s) 217, 775, 1110
XapI RAATTY 3 cut(s) 86, 766, 983
XcmI CCANNNNNNNNNTGG 2 cut(s) 418, 514
XhoI CTCGAG 1 cut(s) 1056
XmaI CCCGGG 1 cut(s) 258
XmaJI CCTAGG 1 cut(s) 890
XspI CTAG 4 cut(s) 14, 96, 891, 938
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.