Rmu_sc0001262.1_g000011

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001262.1
OG0000172
Physical Location & Seq
Forward (+)
56965 .. 58091
1127 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001262.1_g000011.1.cds

Sequence Viewer

Length: 1059 bp
atggttgttgctatcgcttccatgactgtcaggcttgcgaccaaattgtcgctcaaggaaggtgaagaactagtggatttggggaatctcagggttccggggaaggagtttttggcttgcaacttttatttggtggggaggcttaacacatgtagggcggtggtgttggattcattccggagtgcggtgagatcgatgtggagactgacgggggccgtggaggtccaaccacagggcgatcggtttttgtttacattcactcatgaacaggatgttgcacggttaaagaagggaggtccatggggctttcaacatgccatgattctcatgaatgattatgatggcttctcgaagatttcggtggtgagtttggactttgtttggatctgggttgtgctgcagggtatcctattgagaatattgatggaacctactttccggttggtgggtgggatgattggagaggttttggaagtggatggttttgcgcttcgccagggagaagctagagtatggctggttctatccaacaatgattcgatgcgtctggatcgtagggttagggtttctcctgtcgacgtcctaacgctgcgattcaggtatgaaaggcttctggggcgctgcaagttgtgcactctgctgaatcatggaaggcagcaatgccctagggaccttagttttctaggaaaatgcctagccatctatttcttctttactactttctcccttcagggttcccaatttgctaaagaagaaaaggtgcagatttgttcgcttctagagctagtggcatcactcggaactgagggaaccagtggaggggtgcgtcgtccactggaagaggaggaccctgaggatggtaaaagagctaaacgtagtttggtccttatcccggccaacttgcagttggaaaaccttggtttggaattttcttttgaaggtctggtcgaggtgaaggtgatgtcggcttgtaaggtctataagaagaagggcaggcctcgtggtcaaagaaacaaagttaaaggctcgcgcgacggtgtttatctgtggcggctctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

352

Amino Acids

39.86

Weight (kDa)

9.49

Isoelectric Point (pI)

41.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000172)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G59650 AT3G59650
fragaria_vesca FvH4_1g19981 FvH4_1g22221 FvH4_2g13530 FvH4_2g13791 FvH4_2g14332 FvH4_2g14911 FvH4_2g16332 FvH4_3g10980 FvH4_3g11141 FvH4_3g14171 FvH4_3g26311 FvH4_3g28254 FvH4_3g29741 FvH4_4g05261 FvH4_4g12002 FvH4_4g13371 FvH4_4g15541 FvH4_4g18531 FvH4_5g02661 FvH4_5g02662 FvH4_5g16791 FvH4_5g29700 FvH4_5g35881 FvH4_5g37061 FvH4_6g01571 FvH4_6g12761 FvH4_6g14961 FvH4_6g20381 FvH4_6g22001 FvH4_6g23673 FvH4_6g23960 FvH4_6g28051 FvH4_6g31094 FvH4_6g36541 FvH4_7g00911 FvH4_7g06200 FvH4_7g06200 FvH4_7g09551
malus_domestica MD08G1230600.v1.1
prunus_persica Prupe.1G206900_v2.0.a1 Prupe.1G206900_v2.0.a1 Prupe.1G206900_v2.0.a1
pyrus_communis pycom08g20050 pycom15g37590
rosa_chinensis RchiOBHm_Chr1g0333831 RchiOBHm_Chr1g0344871 RchiOBHm_Chr3g0473241 RchiOBHm_Chr5g0018871 RchiOBHm_Chr6g0265791
rosa_laevigata RLG00000005720 RLG00000012718 RLG00000027174 RLG00000029225 RLG00000029527
rosa_multiflora Rmu_co8002714.1_g000001 Rmu_co8072270.1_g000001 Rmu_co8095594.1_g000001 Rmu_co8308871.1_g000001 Rmu_co8398699.1_g000001 Rmu_co8404287.1_g000001 Rmu_sc0000035.1_g000010 Rmu_sc0000133.1_g000007 Rmu_sc0000253.1_g000023 Rmu_sc0000308.1_g000010 Rmu_sc0000309.1_g000030 Rmu_sc0000515.1_g000015 Rmu_sc0000865.1_g000001 Rmu_sc0000889.1_g000005 Rmu_sc0001262.1_g000011 Rmu_sc0001518.1_g000013 Rmu_sc0001533.1_g000006 Rmu_sc0001547.1_g000007 Rmu_sc0001826.1_g000013 Rmu_sc0002060.1_g000017 Rmu_sc0002129.1_g000005 Rmu_sc0002449.1_g000016 Rmu_sc0002460.1_g000036 Rmu_sc0002475.1_g000014 Rmu_sc0002553.1_g000017 Rmu_sc0002759.1_g000033 Rmu_sc0002918.1_g000009 Rmu_sc0002955.1_g000020 Rmu_sc0003094.1_g000010 Rmu_sc0003669.1_g000009 Rmu_sc0004109.1_g000008 Rmu_sc0004350.1_g000007 Rmu_sc0004542.1_g000018 Rmu_sc0004967.1_g000005 Rmu_sc0005026.1_g000005 Rmu_sc0005369.1_g000013 Rmu_sc0005400.1_g000025 Rmu_sc0005420.1_g000006 Rmu_sc0005467.1_g000013 Rmu_sc0005497.1_g000003 Rmu_sc0005607.1_g000023 Rmu_sc0005949.1_g000008 Rmu_sc0005970.1_g000002 Rmu_sc0006452.1_g000001 Rmu_sc0006720.1_g000008 Rmu_sc0006867.1_g000004 Rmu_sc0007177.1_g000006 Rmu_sc0007199.1_g000011 Rmu_sc0007783.1_g000004 Rmu_sc0007885.1_g000006 Rmu_sc0008619.1_g000001 Rmu_sc0008709.1_g000004 Rmu_sc0008709.1_g000005 Rmu_sc0009185.1_g000029 Rmu_sc0010244.1_g000010 Rmu_sc0011610.1_g000005 Rmu_sc0011680.1_g000013 Rmu_sc0012075.1_g000003 Rmu_sc0012278.1_g000001 Rmu_sc0012628.1_g000001 Rmu_sc0018485.1_g000006 Rmu_sc0019960.1_g000001 Rmu_sc0020177.1_g000002 Rmu_sc0020656.1_g000001 Rmu_sc0021333.1_g000003 Rmu_sc0023170.1_g000002 Rmu_sc0023989.1_g000005 Rmu_sc0025259.1_g000001 Rmu_sc0025350.1_g000013 Rmu_sc0029678.1_g000002 Rmu_sc0035939.1_g000001 Rmu_sc0039260.1_g000001 Rmu_sc0039886.1_g000001 Rmu_ssc0000323.1_g000030 Rmu_ssc0000333.1_g000005 Rmu_ssc0000471.1_g000017 Rmu_ssc0000480.1_g000025
rosa_roxburghii Rroxscaffold_1G00006060 Rroxscaffold_1G00048570 Rroxscaffold_1G00057650 Rroxscaffold_1G00072720 Rroxscaffold_4G00281190 Rroxscaffold_4G00317160 Rroxscaffold_6G00411570
rosa_rugosa Rorug01G0004800 Rorug01G0112100 Rorug01G0206100 Rorug02G0324000 Rorug05G0305600 Rorug05G0326800 Rorug06G0018900 Rorug06G0167000 Rorug07G0031200 Rorug07G0071900
rosa_samantha Rh1AG134700 Rh1BG103000 Rh1CG007300 Rh1CG128100 Rh1DG140100 Rh2DG579500 Rh3DG199000 Rh4BG252500 Rh5AG374900 Rh5BG146800 Rh5BG151500 Rh5DG399700
rosa_wichuraiana Rw0G001820 Rw1G011230 Rw1G011240 Rw1G027290 Rw2G011670 Rw2G039270 Rw6G018440 Rw6G023120 Rw7G025180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 46
AatII GACGTC 1 cut(s) 582
AccI GTMKAC 1 cut(s) 576
AccII CGCG 2 cut(s) 1030, 1032
AccIII TCCGGA 1 cut(s) 177
AciI CCGC 3 cut(s) 158, 185, 1051
AclWI GGATC 2 cut(s) 392, 558
AcoI YGGCCR 1 cut(s) 894
AcsI RAATTY 1 cut(s) 926
AcuI CTGAAG 1 cut(s) 713
AcyI GRCGYC 1 cut(s) 579
AfiI CCNNNNNNNGG 7 cut(s) 184, 232, 445, 819, 857, 892, 922
AflIII ACRYGT 1 cut(s) 149
AgsI TTSAA 2 cut(s) 311, 938
AhlI ACTAGT 1 cut(s) 70
AjnI CCWGG 1 cut(s) 495
AjuI GAANNNNNNNTTGG 2 cut(s) 95, 127
AloI GAACNNNNNNTCC 2 cut(s) 420, 452
AluBI AGCT 3 cut(s) 506, 784, 869
AluI AGCT 3 cut(s) 506, 784, 869
Alw21I GWGCWC 1 cut(s) 635
Alw26I GTCTC 1 cut(s) 196
Alw44I GTGCAC 1 cut(s) 631
AlwI GGATC 2 cut(s) 392, 558
Aor13HI TCCGGA 1 cut(s) 177
AoxI GGCC 3 cut(s) 213, 894, 995
ApaLI GTGCAC 1 cut(s) 631
ApeKI GCWGC 4 cut(s) 397, 589, 621, 655
ApoI RAATTY 1 cut(s) 926
Asp700I GAANNNNTTC 1 cut(s) 609
AspA2I CCTAGG 1 cut(s) 665
AspLEI GCGC 3 cut(s) 490, 621, 1032
AspS9I GGNCC 6 cut(s) 213, 223, 296, 670, 847, 883
AsuC2I CCSGG 2 cut(s) 99, 893
AsuHPI GGTGA 5 cut(s) 74, 199, 376, 964, 970
AvaII GGWCC 5 cut(s) 223, 296, 670, 847, 883
AvrII CCTAGG 1 cut(s) 665
AxyI CCTNAGG 1 cut(s) 852
BaeGI GKGCMC 1 cut(s) 635
BauI CACGAG 1 cut(s) 999
Bbv12I GWGCWC 1 cut(s) 635
BbvI GCAGC 4 cut(s) 384, 576, 608, 667
BccI CCATC 5 cut(s) 335, 418, 473, 707, 851
BceAI ACGGC 1 cut(s) 200
BciT130I CCWGG 1 cut(s) 497
BciVI GTATCC 1 cut(s) 416
BcnI CCSGG 2 cut(s) 99, 893
BcoDI GTCTC 1 cut(s) 196
BcuI ACTAGT 1 cut(s) 70
BfaI CTAG 7 cut(s) 71, 507, 666, 683, 695, 779, 785
BfmI CTRYAG 1 cut(s) 398
BfoI RGCGCY 1 cut(s) 622
BfuI GTATCC 1 cut(s) 416
BisI GCNGC 5 cut(s) 398, 590, 622, 656, 1052
BlnI CCTAGG 1 cut(s) 665
BlsI GCNGC 5 cut(s) 399, 591, 623, 657, 1053
Bme1390I CCNGG 3 cut(s) 99, 497, 893
Bme18I GGWCC 5 cut(s) 223, 296, 670, 847, 883
BmgT120I GGNCC 6 cut(s) 213, 223, 296, 670, 847, 883
BmiI GGNNCC 7 cut(s) 96, 214, 429, 671, 736, 811, 849
BmrFI CCNGG 3 cut(s) 99, 497, 893
BmsI GCATC 2 cut(s) 531, 800
BpuEI CTTGAG 1 cut(s) 38
BpuMI CCSGG 2 cut(s) 99, 893
Bsa29I ATCGAT 1 cut(s) 194
BsaHI GRCGYC 1 cut(s) 579
BsaJI CCNNGG 6 cut(s) 98, 216, 299, 496, 665, 916
BsaWI WCCGGW 2 cut(s) 177, 438
Bsc4I CCNNNNNNNGG 7 cut(s) 184, 232, 445, 819, 857, 892, 922
Bse1I ACTGG 2 cut(s) 813, 840
Bse21I CCTNAGG 1 cut(s) 852
Bse3DI GCAATG 1 cut(s) 665
BseAI TCCGGA 1 cut(s) 177
BseBI CCWGG 1 cut(s) 497
BseCI ATCGAT 1 cut(s) 194
BseDI CCNNGG 6 cut(s) 98, 216, 299, 496, 665, 916
BseGI GGATG 4 cut(s) 277, 459, 484, 862
BseLI CCNNNNNNNGG 7 cut(s) 184, 232, 445, 819, 857, 892, 922
BseMI GCAATG 1 cut(s) 665
BseMII CTCAG 3 cut(s) 103, 795, 843
BseNI ACTGG 2 cut(s) 813, 840
BseRI GAGGAG 1 cut(s) 857
BseSI GKGCMC 1 cut(s) 635
BseXI GCAGC 4 cut(s) 384, 576, 608, 667
BsgI GTGCAG 1 cut(s) 782
Bsh1236I CGCG 2 cut(s) 1030, 1032
Bsh1285I CGRYCG 1 cut(s) 241
BshFI GGCC 3 cut(s) 215, 896, 997
BshVI ATCGAT 1 cut(s) 194
BsiEI CGRYCG 1 cut(s) 241
BsiHKAI GWGCWC 1 cut(s) 635
BsiSI CCGG 4 cut(s) 98, 178, 439, 893
BslFI GGGAC 1 cut(s) 683
BslI CCNNNNNNNGG 7 cut(s) 184, 232, 445, 819, 857, 892, 922
BsmAI GTCTC 1 cut(s) 196
BsmFI GGGAC 1 cut(s) 683
BsnI GGCC 3 cut(s) 215, 896, 997
Bsp1286I GDGCHC 1 cut(s) 635
Bsp13I TCCGGA 1 cut(s) 177
Bsp143I GATC 4 cut(s) 191, 238, 384, 550
Bsp19I CCATGG 1 cut(s) 299
BspACI CCGC 3 cut(s) 158, 185, 1051
BspANI GGCC 3 cut(s) 215, 896, 997
BspCNI CTCAG 3 cut(s) 102, 796, 844
BspDI ATCGAT 1 cut(s) 194
BspEI TCCGGA 1 cut(s) 177
BspFNI CGCG 2 cut(s) 1030, 1032
BspHI TCATGA 2 cut(s) 262, 327
BspLI GGNNCC 7 cut(s) 96, 214, 429, 671, 736, 811, 849
BspMAI CTGCAG 1 cut(s) 402
BspPI GGATC 2 cut(s) 392, 558
BsrDI GCAATG 1 cut(s) 665
BsrI ACTGG 2 cut(s) 813, 840
BssECI CCNNGG 6 cut(s) 98, 216, 299, 496, 665, 916
BssMI GATC 4 cut(s) 191, 238, 384, 550
BssNI GRCGYC 1 cut(s) 579
BssSI CACGAG 1 cut(s) 999
BssT1I CCWWGG 3 cut(s) 299, 665, 916
Bst2BI CACGAG 1 cut(s) 999
Bst2UI CCWGG 1 cut(s) 497
Bst4CI ACNGT 3 cut(s) 28, 282, 1037
Bst6I CTCTTC 1 cut(s) 834
BstACI GRCGYC 1 cut(s) 579
BstAPI GCANNNNNTGC 1 cut(s) 630
BstC8I GCNNGC 4 cut(s) 36, 118, 995, 1028
BstDEI CTNAG 4 cut(s) 89, 674, 804, 852
BstDSI CCRYGG 2 cut(s) 216, 299
BstF5I GGATG 4 cut(s) 277, 459, 484, 862
BstFNI CGCG 2 cut(s) 1030, 1032
BstH2I RGCGCY 1 cut(s) 622
BstHHI GCGC 3 cut(s) 490, 621, 1032
BstKTI GATC 4 cut(s) 194, 241, 387, 553
BstMAI GTCTC 1 cut(s) 196
BstMBI GATC 4 cut(s) 191, 238, 384, 550
BstMCI CGRYCG 1 cut(s) 241
BstMWI GCNNNNNNNGC 3 cut(s) 616, 630, 781
BstNI CCWGG 1 cut(s) 497
BstNSI RCATGY 2 cut(s) 153, 317
BstSCI CCNGG 3 cut(s) 97, 495, 891
BstSFI CTRYAG 1 cut(s) 398
BstSLI GKGCMC 1 cut(s) 635
BstUI CGCG 2 cut(s) 1030, 1032
BstV1I GCAGC 4 cut(s) 384, 576, 608, 667
BstX2I RGATCY 1 cut(s) 384
BstYI RGATCY 1 cut(s) 384
Bsu15I ATCGAT 1 cut(s) 194
Bsu36I CCTNAGG 1 cut(s) 852
BsuI GTATCC 1 cut(s) 416
BsuRI GGCC 3 cut(s) 215, 896, 997
BsuTUI ATCGAT 1 cut(s) 194
BtgI CCRYGG 2 cut(s) 216, 299
BtsCI GGATG 4 cut(s) 277, 459, 484, 862
BtsIMutI CAGTG 2 cut(s) 820, 833
Cac8I GCNNGC 4 cut(s) 36, 118, 995, 1028
CciI TCATGA 2 cut(s) 262, 327
CfoI GCGC 3 cut(s) 490, 621, 1032
Cfr13I GGNCC 6 cut(s) 213, 223, 296, 670, 847, 883
ClaI ATCGAT 1 cut(s) 194
CseI GACGC 2 cut(s) 533, 815
CviAII CATG 8 cut(s) 22, 150, 263, 300, 314, 319, 328, 647
DdeI CTNAG 4 cut(s) 89, 674, 804, 852
DpnI GATC 4 cut(s) 193, 240, 386, 552
DpnII GATC 4 cut(s) 191, 238, 384, 550
DrdI GACNNNNNNGTC 1 cut(s) 46
DseDI GACNNNNNNGTC 1 cut(s) 46
EaeI YGGCCR 1 cut(s) 894
Eam1104I CTCTTC 1 cut(s) 834
EarI CTCTTC 1 cut(s) 834
Eco130I CCWWGG 3 cut(s) 299, 665, 916
Eco147I AGGCCT 1 cut(s) 997
Eco47I GGWCC 5 cut(s) 223, 296, 670, 847, 883
Eco57I CTGAAG 1 cut(s) 713
Eco81I CCTNAGG 1 cut(s) 852
EcoO109I RGGNCCY 2 cut(s) 670, 847
EcoRII CCWGG 1 cut(s) 495
EcoT14I CCWWGG 3 cut(s) 299, 665, 916
ErhI CCWWGG 3 cut(s) 299, 665, 916
FaeI CATG 8 cut(s) 25, 153, 266, 303, 317, 322, 331, 650
FaqI GGGAC 1 cut(s) 683
FatI CATG 8 cut(s) 21, 149, 262, 299, 313, 318, 327, 646
FblI GTMKAC 1 cut(s) 576
Fnu4HI GCNGC 5 cut(s) 398, 590, 622, 656, 1052
FokI GGATG 4 cut(s) 284, 466, 491, 869
Fsp4HI GCNGC 5 cut(s) 398, 590, 622, 656, 1052
FspBI CTAG 7 cut(s) 71, 507, 666, 683, 695, 779, 785
GlaI GCGC 3 cut(s) 489, 620, 1031
GluI GCNGC 5 cut(s) 398, 590, 622, 656, 1052
HaeII RGCGCY 1 cut(s) 622
HaeIII GGCC 3 cut(s) 215, 896, 997
HapII CCGG 4 cut(s) 98, 178, 439, 893
HgaI GACGC 2 cut(s) 533, 815
HhaI GCGC 3 cut(s) 490, 621, 1032
Hin1I GRCGYC 1 cut(s) 579
Hin1II CATG 8 cut(s) 25, 153, 266, 303, 317, 322, 331, 650
Hin6I GCGC 3 cut(s) 488, 619, 1030
HinP1I GCGC 3 cut(s) 488, 619, 1030
HincII GTYRAC 1 cut(s) 577
HindII GTYRAC 1 cut(s) 577
HinfI GANTC 6 cut(s) 85, 170, 322, 536, 594, 643
HpaII CCGG 4 cut(s) 98, 178, 439, 893
HphI GGTGA 5 cut(s) 74, 199, 376, 964, 970
Hpy166II GTNNAC 4 cut(s) 252, 577, 633, 833
Hpy188I TCNGA 2 cut(s) 800, 1058
Hpy188III TCNNGA 6 cut(s) 178, 263, 328, 349, 548, 779
Hpy8I GTNNAC 4 cut(s) 252, 577, 633, 833
Hpy99I CGWCG 3 cut(s) 581, 831, 1037
HpyAV CCTTC 8 cut(s) 53, 97, 283, 645, 737, 932, 949, 982
HpyCH4III ACNGT 3 cut(s) 28, 282, 1037
HpyCH4IV ACGT 2 cut(s) 579, 874
HpyCH4V TGCA 7 cut(s) 120, 278, 400, 624, 633, 763, 904
HpyF10VI GCNNNNNNNGC 3 cut(s) 616, 630, 781
HpyF3I CTNAG 4 cut(s) 89, 674, 804, 852
HpySE526I ACGT 2 cut(s) 579, 874
Hsp92I GRCGYC 1 cut(s) 579
Hsp92II CATG 8 cut(s) 25, 153, 266, 303, 317, 322, 331, 650
HspAI GCGC 3 cut(s) 488, 619, 1030
Kpn2I TCCGGA 1 cut(s) 177
Kzo9I GATC 4 cut(s) 191, 238, 384, 550
Lsp1109I GCAGC 4 cut(s) 384, 576, 608, 667
LweI GCATC 2 cut(s) 531, 800
MaeI CTAG 7 cut(s) 71, 507, 666, 683, 695, 779, 785
MaeII ACGT 2 cut(s) 579, 874
MalI GATC 4 cut(s) 193, 240, 386, 552
MboI GATC 4 cut(s) 191, 238, 384, 550
MboII GAAGA 6 cut(s) 77, 364, 700, 764, 851, 997
MflI RGATCY 1 cut(s) 384
MhlI GDGCHC 1 cut(s) 635
MluCI AATT 3 cut(s) 44, 740, 926
MmeI TCCRAC 4 cut(s) 147, 250, 552, 888
MroI TCCGGA 1 cut(s) 177
MroXI GAANNNNTTC 1 cut(s) 609
MseI TTAA 3 cut(s) 144, 284, 1020
MspI CCGG 4 cut(s) 98, 178, 439, 893
MspR9I CCNGG 3 cut(s) 99, 497, 893
MvaI CCWGG 1 cut(s) 497
MvnI CGCG 2 cut(s) 1030, 1032
MwoI GCNNNNNNNGC 3 cut(s) 616, 630, 781
NciI CCSGG 2 cut(s) 99, 893
NcoI CCATGG 1 cut(s) 299
NdeII GATC 4 cut(s) 191, 238, 384, 550
NlaIII CATG 8 cut(s) 25, 153, 266, 303, 317, 322, 331, 650
NlaIV GGNNCC 7 cut(s) 96, 214, 429, 671, 736, 811, 849
NspI RCATGY 2 cut(s) 153, 317
PagI TCATGA 2 cut(s) 262, 327
PceI AGGCCT 1 cut(s) 997
PciI ACATGT 1 cut(s) 149
PdmI GAANNNNTTC 1 cut(s) 609
PfeI GAWTC 6 cut(s) 85, 170, 322, 536, 594, 643
PkrI GCNGC 5 cut(s) 399, 591, 623, 657, 1053
Ple19I CGATCG 1 cut(s) 241
PpuMI RGGWCCY 2 cut(s) 670, 847
PscI ACATGT 1 cut(s) 149
Psp5II RGGWCCY 2 cut(s) 670, 847
Psp6I CCWGG 1 cut(s) 495
PspGI CCWGG 1 cut(s) 495
PspN4I GGNNCC 7 cut(s) 96, 214, 429, 671, 736, 811, 849
PspPI GGNCC 6 cut(s) 213, 223, 296, 670, 847, 883
PspPPI RGGWCCY 2 cut(s) 670, 847
PsrI GAACNNNNNNTAC 2 cut(s) 504, 536
PstI CTGCAG 1 cut(s) 402
PsuI RGATCY 1 cut(s) 384
PvuI CGATCG 1 cut(s) 241
SalI GTCGAC 1 cut(s) 575
SaqAI TTAA 3 cut(s) 144, 284, 1020
SatI GCNGC 5 cut(s) 398, 590, 622, 656, 1052
Sau3AI GATC 4 cut(s) 191, 238, 384, 550
Sau96I GGNCC 6 cut(s) 213, 223, 296, 670, 847, 883
ScrFI CCNGG 3 cut(s) 99, 497, 893
SduI GDGCHC 1 cut(s) 635
SfaNI GCATC 2 cut(s) 531, 800
SfcI CTRYAG 1 cut(s) 398
SinI GGWCC 5 cut(s) 223, 296, 670, 847, 883
SmlI CTYRAG 1 cut(s) 53
SmoI CTYRAG 1 cut(s) 53
SpeI ACTAGT 1 cut(s) 70
Sse9I AATT 3 cut(s) 44, 740, 926
SseBI AGGCCT 1 cut(s) 997
SsiI CCGC 3 cut(s) 158, 185, 1051
SspI AATATT 1 cut(s) 420
SspMI CTAG 7 cut(s) 71, 507, 666, 683, 695, 779, 785
StuI AGGCCT 1 cut(s) 997
StyD4I CCNGG 3 cut(s) 97, 495, 891
StyI CCWWGG 3 cut(s) 299, 665, 916
TaaI ACNGT 3 cut(s) 28, 282, 1037
TaiI ACGT 2 cut(s) 582, 877
TaqI TCGA 5 cut(s) 194, 350, 539, 576, 948
TasI AATT 3 cut(s) 44, 740, 926
TauI GCSGC 1 cut(s) 1054
TfiI GAWTC 6 cut(s) 85, 170, 322, 536, 594, 643
Tru1I TTAA 3 cut(s) 144, 284, 1020
Tru9I TTAA 3 cut(s) 144, 284, 1020
TscAI CASTG 2 cut(s) 820, 840
TseI GCWGC 4 cut(s) 397, 589, 621, 655
TspDTI ATGAA 4 cut(s) 162, 279, 344, 618
TspRI CASTG 2 cut(s) 820, 840
VneI GTGCAC 1 cut(s) 631
VpaK11BI GGWCC 5 cut(s) 223, 296, 670, 847, 883
XapI RAATTY 1 cut(s) 926
XbaI TCTAGA 1 cut(s) 778
XceI RCATGY 2 cut(s) 153, 317
XcmI CCANNNNNNNNNTGG 1 cut(s) 904
XmaJI CCTAGG 1 cut(s) 665
XmiI GTMKAC 1 cut(s) 576
XmnI GAANNNNTTC 1 cut(s) 609
XspI CTAG 7 cut(s) 71, 507, 666, 683, 695, 779, 785
ZraI GACGTC 1 cut(s) 580
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.