Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0008619.1

Orthogroup ID

OG0000172

Physical Location & Seq

Genomic Coordinates Reverse (-)

1 .. 3298

Gene Structure 3298 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0008619.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1134 bp

atggctacagctattgcctccatgtctgccaggctagcgaccaagttgtcgctcagagagggtgaagaaccagtggacttggggaaccttagggttccagggaaggaatttttagctcgcaatttttacttggtggggaaactcaatacgtgcagggcggtggttttggatttgttccgaagtgcggtccgatccatgtggagactgacggggacggtggaagtccaaccccggggtgatcgttttctttttacgttcactcatgaacgtgatgttgcaagggtcaagaagggaggtccatggggctttcaacgggctatgattctgctgaatgactatgatggtttttcagcgattgctaaggtgaagctcgactttgtctggatctgggtggtgcttcagggtatcccaccgggtatcctgactgaacccacggtcaaattggtgggagatacgattggagaggtcctggaggtggattggttggctcttcatcatggggaagctcgagttaggcttattctctccatccatgacccggtgcgcctggatcgtaggcgatgccctagggaggaggagtcggacaccgatactgtggtggatgacggcttgcagcagacttcaggcacggctctccccgccatcgtgtttcgggccaactcccacccctctccttccttgctttctactttcaaggttcctaacctgctgaagaagaaacaagtgcagatccgtcctcttctggaattgatggctctgcctgggtcagagggcacatccgcttctgatccagtaatggaggtgcgccgccctggggaggaggtggatacggaggttagtaagaaagataaacactgtctagctattgctccggccactctgcagccggaaaatcttgggttagaattctcctctgatggtttggtggaagtgaaggtgacgtcgcctcccaaggtttataagaagaaaggtaggcctcggggacagaggaacaaggttaacaggagtggcagctttccctgcttccaagtccgagtaggagaagatcccctatgtcagctagggtgtgatggggtctccttggttctggcgacgtacaccagaagggtcttaggcgacaacggaatcaaggag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005829 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006979 GO:0008150 GO:0008152 GO:0009505 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0016020 GO:0016491 GO:0016614 GO:0016899 GO:0030054 GO:0030312 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048046 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0055114 GO:0071944 GO:0098542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BBE FAD_binding_4

Protein Analysis

378

Amino Acids

41.85

Weight (kDa)

9.07

Isoelectric Point (pI)

37.75

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000172)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G59650 AT3G59650
fragaria_vesca	FvH4_1g19981 FvH4_1g22221 FvH4_2g13530 FvH4_2g13791 FvH4_2g14332 FvH4_2g14911 FvH4_2g16332 FvH4_3g10980 FvH4_3g11141 FvH4_3g14171 FvH4_3g26311 FvH4_3g28254 FvH4_3g29741 FvH4_4g05261 FvH4_4g12002 FvH4_4g13371 FvH4_4g15541 FvH4_4g18531 FvH4_5g02661 FvH4_5g02662 FvH4_5g16791 FvH4_5g29700 FvH4_5g35881 FvH4_5g37061 FvH4_6g01571 FvH4_6g12761 FvH4_6g14961 FvH4_6g20381 FvH4_6g22001 FvH4_6g23673 FvH4_6g23960 FvH4_6g28051 FvH4_6g31094 FvH4_6g36541 FvH4_7g00911 FvH4_7g06200 FvH4_7g06200 FvH4_7g09551
malus_domestica	MD08G1230600.v1.1
prunus_persica	Prupe.1G206900_v2.0.a1 Prupe.1G206900_v2.0.a1 Prupe.1G206900_v2.0.a1
pyrus_communis	pycom08g20050 pycom15g37590
rosa_chinensis	RchiOBHm_Chr1g0333831 RchiOBHm_Chr1g0344871 RchiOBHm_Chr3g0473241 RchiOBHm_Chr5g0018871 RchiOBHm_Chr6g0265791
rosa_laevigata	RLG00000005720 RLG00000012718 RLG00000027174 RLG00000029225 RLG00000029527
rosa_multiflora	Rmu_co8002714.1_g000001 Rmu_co8072270.1_g000001 Rmu_co8095594.1_g000001 Rmu_co8308871.1_g000001 Rmu_co8398699.1_g000001 Rmu_co8404287.1_g000001 Rmu_sc0000035.1_g000010 Rmu_sc0000133.1_g000007 Rmu_sc0000253.1_g000023 Rmu_sc0000308.1_g000010 Rmu_sc0000309.1_g000030 Rmu_sc0000515.1_g000015 Rmu_sc0000865.1_g000001 Rmu_sc0000889.1_g000005 Rmu_sc0001262.1_g000011 Rmu_sc0001518.1_g000013 Rmu_sc0001533.1_g000006 Rmu_sc0001547.1_g000007 Rmu_sc0001826.1_g000013 Rmu_sc0002060.1_g000017 Rmu_sc0002129.1_g000005 Rmu_sc0002449.1_g000016 Rmu_sc0002460.1_g000036 Rmu_sc0002475.1_g000014 Rmu_sc0002553.1_g000017 Rmu_sc0002759.1_g000033 Rmu_sc0002918.1_g000009 Rmu_sc0002955.1_g000020 Rmu_sc0003094.1_g000010 Rmu_sc0003669.1_g000009 Rmu_sc0004109.1_g000008 Rmu_sc0004350.1_g000007 Rmu_sc0004542.1_g000018 Rmu_sc0004967.1_g000005 Rmu_sc0005026.1_g000005 Rmu_sc0005369.1_g000013 Rmu_sc0005400.1_g000025 Rmu_sc0005420.1_g000006 Rmu_sc0005467.1_g000013 Rmu_sc0005497.1_g000003 Rmu_sc0005607.1_g000023 Rmu_sc0005949.1_g000008 Rmu_sc0005970.1_g000002 Rmu_sc0006452.1_g000001 Rmu_sc0006720.1_g000008 Rmu_sc0006867.1_g000004 Rmu_sc0007177.1_g000006 Rmu_sc0007199.1_g000011 Rmu_sc0007783.1_g000004 Rmu_sc0007885.1_g000006 Rmu_sc0008619.1_g000001 Rmu_sc0008709.1_g000004 Rmu_sc0008709.1_g000005 Rmu_sc0009185.1_g000029 Rmu_sc0010244.1_g000010 Rmu_sc0011610.1_g000005 Rmu_sc0011680.1_g000013 Rmu_sc0012075.1_g000003 Rmu_sc0012278.1_g000001 Rmu_sc0012628.1_g000001 Rmu_sc0018485.1_g000006 Rmu_sc0019960.1_g000001 Rmu_sc0020177.1_g000002 Rmu_sc0020656.1_g000001 Rmu_sc0021333.1_g000003 Rmu_sc0023170.1_g000002 Rmu_sc0023989.1_g000005 Rmu_sc0025259.1_g000001 Rmu_sc0025350.1_g000013 Rmu_sc0029678.1_g000002 Rmu_sc0035939.1_g000001 Rmu_sc0039260.1_g000001 Rmu_sc0039886.1_g000001 Rmu_ssc0000323.1_g000030 Rmu_ssc0000333.1_g000005 Rmu_ssc0000471.1_g000017 Rmu_ssc0000480.1_g000025
rosa_roxburghii	Rroxscaffold_1G00006060 Rroxscaffold_1G00048570 Rroxscaffold_1G00057650 Rroxscaffold_1G00072720 Rroxscaffold_4G00281190 Rroxscaffold_4G00317160 Rroxscaffold_6G00411570
rosa_rugosa	Rorug01G0004800 Rorug01G0112100 Rorug01G0206100 Rorug02G0324000 Rorug05G0305600 Rorug05G0326800 Rorug06G0018900 Rorug06G0167000 Rorug07G0031200 Rorug07G0071900
rosa_samantha	Rh1AG134700 Rh1BG103000 Rh1CG007300 Rh1CG128100 Rh1DG140100 Rh2DG579500 Rh3DG199000 Rh4BG252500 Rh5AG374900 Rh5BG146800 Rh5BG151500 Rh5DG399700
rosa_wichuraiana	Rw0G001820 Rw1G011230 Rw1G011240 Rw1G027290 Rw2G011670 Rw2G039270 Rw6G018440 Rw6G023120 Rw7G025180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	960
AasI	GACNNNNNNGTC	1 cut(s)	46
AatII	GACGTC	1 cut(s)	944
Acc36I	ACCTGC	1 cut(s)	714
AciI	CCGC	5 cut(s)	158, 185, 639, 780, 808
AclWI	GGATC	6 cut(s)	186, 392, 558, 724, 782, 1040
AcoI	YGGCCR	1 cut(s)	873
AcsI	RAATTY	2 cut(s)	107, 905
AcuI	CTGAAG	3 cut(s)	383, 606, 731
AcyI	GRCGYC	1 cut(s)	941
AfaI	GTAC	1 cut(s)	1097
AfiI	CCNNNNNNNGG	7 cut(s)	184, 232, 475, 538, 571, 814, 817
AgsI	TTSAA	2 cut(s)	311, 694
AjnI	CCWGG	6 cut(s)	29, 97, 468, 546, 760, 811
AluBI	AGCT	7 cut(s)	11, 116, 370, 506, 863, 1014, 1060
AluI	AGCT	7 cut(s)	11, 116, 370, 506, 863, 1014, 1060
Alw26I	GTCTC	2 cut(s)	196, 1081
AlwI	GGATC	6 cut(s)	186, 392, 558, 724, 782, 1040
Ama87I	CYCGRG	3 cut(s)	231, 507, 978
AoxI	GGCC	3 cut(s)	654, 873, 974
ApeKI	GCWGC	3 cut(s)	613, 883, 1011
ApoI	RAATTY	2 cut(s)	107, 905
AspA2I	CCTAGG	1 cut(s)	566
AspLEI	GCGC	2 cut(s)	546, 807
AspS9I	GGNCC	4 cut(s)	187, 296, 466, 654
AsuC2I	CCSGG	4 cut(s)	232, 233, 414, 539
AsuHPI	GGTGA	4 cut(s)	74, 248, 376, 949
AsuNHI	GCTAGC	1 cut(s)	34
AvaI	CYCGRG	3 cut(s)	231, 507, 978
AvaII	GGWCC	3 cut(s)	187, 296, 466
AvrII	CCTAGG	1 cut(s)	566
AxyI	CCTNAGG	1 cut(s)	89
BaeGI	GKGCMC	1 cut(s)	776
BaeI	ACNNNNGTAYC	4 cut(s)	582, 615, 819, 852
BbvI	GCAGC	3 cut(s)	625, 895, 1023
BccI	CCATC	6 cut(s)	335, 536, 650, 745, 911, 1064
BceAI	ACGGC	2 cut(s)	622, 645
BciT130I	CCWGG	6 cut(s)	31, 99, 470, 548, 762, 813
BciVI	GTATCC	3 cut(s)	416, 428, 820
BcnI	CCSGG	4 cut(s)	232, 233, 414, 539
BcoDI	GTCTC	2 cut(s)	196, 1081
BfaI	CTAG	4 cut(s)	35, 567, 860, 1061
BfmI	CTRYAG	2 cut(s)	6, 881
BfuAI	ACCTGC	1 cut(s)	714
BfuI	GTATCC	3 cut(s)	416, 428, 820
BisI	GCNGC	4 cut(s)	614, 808, 884, 1012
BlnI	CCTAGG	1 cut(s)	566
BlsI	GCNGC	4 cut(s)	615, 809, 885, 1013
Bme18I	GGWCC	3 cut(s)	187, 296, 466
BmeT110I	CYCGRG	3 cut(s)	231, 507, 978
BmgT120I	GGNCC	4 cut(s)	187, 296, 466, 654
BmiI	GGNNCC	3 cut(s)	86, 96, 699
BmsI	GCATC	1 cut(s)	551
BmtI	GCTAGC	1 cut(s)	38
BpmI	CTGGAG	1 cut(s)	491
Bpu10I	CCTNAGC	1 cut(s)	360
BpuMI	CCSGG	4 cut(s)	232, 233, 414, 539
BsaAI	YACGTR	1 cut(s)	150
BsaHI	GRCGYC	1 cut(s)	941
BsaI	GGTCTC	1 cut(s)	1081
BsaXI	ACNNNNNCTCC	4 cut(s)	563, 593, 931, 961
Bsc4I	CCNNNNNNNGG	7 cut(s)	184, 232, 475, 538, 571, 814, 817
Bse1I	ACTGG	2 cut(s)	71, 791
Bse21I	CCTNAGG	1 cut(s)	89
BseBI	CCWGG	6 cut(s)	31, 99, 470, 548, 762, 813
BseGI	GGATG	3 cut(s)	528, 607, 776
BseLI	CCNNNNNNNGG	7 cut(s)	184, 232, 475, 538, 571, 814, 817
BseMII	CTCAG	1 cut(s)	67
BseNI	ACTGG	2 cut(s)	71, 791
BseRI	GAGGAG	4 cut(s)	587, 590, 833, 901
BseSI	GKGCMC	1 cut(s)	776
BseXI	GCAGC	3 cut(s)	625, 895, 1023
BsgI	GTGCAG	2 cut(s)	172, 746
BshFI	GGCC	3 cut(s)	656, 875, 976
BsiHKCI	CYCGRG	3 cut(s)	231, 507, 978
BsiSI	CCGG	5 cut(s)	232, 413, 539, 872, 887
BslFI	GGGAC	2 cut(s)	226, 996
BslI	CCNNNNNNNGG	7 cut(s)	184, 232, 475, 538, 571, 814, 817
BsmAI	GTCTC	2 cut(s)	196, 1081
BsmFI	GGGAC	2 cut(s)	226, 996
BsnI	GGCC	3 cut(s)	656, 875, 976
Bso31I	GGTCTC	1 cut(s)	1081
BsoBI	CYCGRG	3 cut(s)	231, 507, 978
Bsp1286I	GDGCHC	1 cut(s)	776
Bsp143I	GATC	7 cut(s)	191, 238, 384, 550, 729, 787, 1045
Bsp19I	CCATGG	1 cut(s)	299
BspACI	CCGC	5 cut(s)	158, 185, 639, 780, 808
BspANI	GGCC	3 cut(s)	656, 875, 976
BspCNI	CTCAG	1 cut(s)	66
BspHI	TCATGA	1 cut(s)	262
BspLI	GGNNCC	3 cut(s)	86, 96, 699
BspMAI	CTGCAG	1 cut(s)	885
BspMI	ACCTGC	1 cut(s)	714
BspOI	GCTAGC	1 cut(s)	38
BspPI	GGATC	6 cut(s)	186, 392, 558, 724, 782, 1040
BspQI	GCTCTTC	1 cut(s)	495
BspTNI	GGTCTC	1 cut(s)	1081
BsrI	ACTGG	2 cut(s)	71, 791
BssMI	GATC	7 cut(s)	191, 238, 384, 550, 729, 787, 1045
BssNI	GRCGYC	1 cut(s)	941
BssT1I	CCWWGG	4 cut(s)	299, 566, 951, 1080
Bst2UI	CCWGG	6 cut(s)	31, 99, 470, 548, 762, 813
Bst4CI	ACNGT	4 cut(s)	217, 436, 595, 857
Bst6I	CTCTTC	2 cut(s)	495, 744
BstACI	GRCGYC	1 cut(s)	941
BstBAI	YACGTR	1 cut(s)	150
BstC8I	GCNNGC	3 cut(s)	36, 118, 611
BstDEI	CTNAG	4 cut(s)	53, 89, 360, 1111
BstDSI	CCRYGG	2 cut(s)	299, 432
BstF5I	GGATG	3 cut(s)	528, 607, 776
BstHHI	GCGC	2 cut(s)	546, 807
BstKTI	GATC	7 cut(s)	194, 241, 387, 553, 732, 790, 1048
BstMAI	GTCTC	2 cut(s)	196, 1081
BstMBI	GATC	7 cut(s)	191, 238, 384, 550, 729, 787, 1045
BstMWI	GCNNNNNNNGC	3 cut(s)	35, 638, 1020
BstNI	CCWGG	6 cut(s)	31, 99, 470, 548, 762, 813
BstSFI	CTRYAG	2 cut(s)	6, 881
BstSLI	GKGCMC	1 cut(s)	776
BstV1I	GCAGC	3 cut(s)	625, 895, 1023
BstX2I	RGATCY	3 cut(s)	384, 729, 1045
BstYI	RGATCY	3 cut(s)	384, 729, 1045
Bsu36I	CCTNAGG	1 cut(s)	89
BsuI	GTATCC	3 cut(s)	416, 428, 820
BsuRI	GGCC	3 cut(s)	656, 875, 976
BtgI	CCRYGG	2 cut(s)	299, 432
BtgZI	GCGATG	1 cut(s)	574
BtsCI	GGATG	3 cut(s)	528, 607, 776
BtsIMutI	CAGTG	2 cut(s)	78, 853
BveI	ACCTGC	1 cut(s)	714
Cac8I	GCNNGC	3 cut(s)	36, 118, 611
CciI	TCATGA	1 cut(s)	262
CfoI	GCGC	2 cut(s)	546, 807
Cfr13I	GGNCC	4 cut(s)	187, 296, 466, 654
Cfr9I	CCCGGG	1 cut(s)	231
CpoI	CGGWCCG	1 cut(s)	187
Csp6I	GTAC	1 cut(s)	1096
CspI	CGGWCCG	1 cut(s)	187
CviAII	CATG	6 cut(s)	22, 196, 263, 300, 497, 533
CviQI	GTAC	1 cut(s)	1096
DdeI	CTNAG	4 cut(s)	53, 89, 360, 1111
DpnI	GATC	7 cut(s)	193, 240, 386, 552, 731, 789, 1047
DpnII	GATC	7 cut(s)	191, 238, 384, 550, 729, 787, 1045
DrdI	GACNNNNNNGTC	1 cut(s)	46
DseDI	GACNNNNNNGTC	1 cut(s)	46
EaeI	YGGCCR	1 cut(s)	873
Eam1104I	CTCTTC	2 cut(s)	495, 744
EarI	CTCTTC	2 cut(s)	495, 744
Eco130I	CCWWGG	4 cut(s)	299, 566, 951, 1080
Eco147I	AGGCCT	1 cut(s)	976
Eco31I	GGTCTC	1 cut(s)	1081
Eco47I	GGWCC	3 cut(s)	187, 296, 466
Eco57I	CTGAAG	3 cut(s)	383, 606, 731
Eco81I	CCTNAGG	1 cut(s)	89
Eco88I	CYCGRG	3 cut(s)	231, 507, 978
EcoO109I	RGGNCCY	1 cut(s)	466
EcoRI	GAATTC	1 cut(s)	905
EcoRII	CCWGG	6 cut(s)	29, 97, 468, 546, 760, 811
EcoT14I	CCWWGG	4 cut(s)	299, 566, 951, 1080
ErhI	CCWWGG	4 cut(s)	299, 566, 951, 1080
FaeI	CATG	6 cut(s)	25, 199, 266, 303, 500, 536
FalI	AAGNNNNNCTT	2 cut(s)	359, 391
FaqI	GGGAC	2 cut(s)	226, 996
FatI	CATG	6 cut(s)	21, 195, 262, 299, 496, 532
FauI	CCCGC	1 cut(s)	646
Fnu4HI	GCNGC	4 cut(s)	614, 808, 884, 1012
FokI	GGATG	3 cut(s)	515, 614, 763
Fsp4HI	GCNGC	4 cut(s)	614, 808, 884, 1012
FspBI	CTAG	4 cut(s)	35, 567, 860, 1061
GlaI	GCGC	2 cut(s)	545, 806
GluI	GCNGC	4 cut(s)	614, 808, 884, 1012
GsuI	CTGGAG	1 cut(s)	491
HaeIII	GGCC	3 cut(s)	656, 875, 976
HapII	CCGG	5 cut(s)	232, 413, 539, 872, 887
HhaI	GCGC	2 cut(s)	546, 807
Hin1I	GRCGYC	1 cut(s)	941
Hin1II	CATG	6 cut(s)	25, 199, 266, 303, 500, 536
Hin6I	GCGC	2 cut(s)	544, 805
HinP1I	GCGC	2 cut(s)	544, 805
HincII	GTYRAC	1 cut(s)	1000
HindII	GTYRAC	1 cut(s)	1000
HinfI	GANTC	3 cut(s)	322, 578, 1125
HpaI	GTTAAC	1 cut(s)	1000
HpaII	CCGG	5 cut(s)	232, 413, 539, 872, 887
HphI	GGTGA	4 cut(s)	74, 248, 376, 949
Hpy166II	GTNNAC	4 cut(s)	76, 258, 1000, 1098
Hpy188I	TCNGA	8 cut(s)	56, 179, 191, 583, 769, 787, 916, 1034
Hpy188III	TCNNGA	5 cut(s)	263, 286, 382, 421, 743
Hpy8I	GTNNAC	4 cut(s)	76, 258, 1000, 1098
Hpy99I	CGWCG	2 cut(s)	946, 1096
HpyAV	CCTTC	5 cut(s)	97, 283, 684, 928, 1098
HpyCH4III	ACNGT	4 cut(s)	217, 436, 595, 857
HpyCH4IV	ACGT	5 cut(s)	149, 254, 268, 941, 1094
HpyCH4V	TGCA	5 cut(s)	153, 278, 613, 727, 883
HpyF10VI	GCNNNNNNNGC	3 cut(s)	35, 638, 1020
HpyF3I	CTNAG	4 cut(s)	53, 89, 360, 1111
HpySE526I	ACGT	5 cut(s)	149, 254, 268, 941, 1094
Hsp92I	GRCGYC	1 cut(s)	941
Hsp92II	CATG	6 cut(s)	25, 199, 266, 303, 500, 536
HspAI	GCGC	2 cut(s)	544, 805
KspAI	GTTAAC	1 cut(s)	1000
Kzo9I	GATC	7 cut(s)	191, 238, 384, 550, 729, 787, 1045
LguI	GCTCTTC	1 cut(s)	495
LmnI	GCTCC	1 cut(s)	874
Lsp1109I	GCAGC	3 cut(s)	625, 895, 1023
LweI	GCATC	1 cut(s)	551
MaeI	CTAG	4 cut(s)	35, 567, 860, 1061
MaeII	ACGT	5 cut(s)	149, 254, 268, 941, 1094
MaeIII	GTNAC	1 cut(s)	937
MalI	GATC	7 cut(s)	193, 240, 386, 552, 731, 789, 1047
MboI	GATC	7 cut(s)	191, 238, 384, 550, 729, 787, 1045
MboII	GAAGA	7 cut(s)	77, 482, 724, 727, 731, 976, 1055
MflI	RGATCY	3 cut(s)	384, 729, 1045
MhlI	GDGCHC	1 cut(s)	776
MluCI	AATT	5 cut(s)	107, 121, 440, 746, 905
MlyI	GAGTC	1 cut(s)	587
MmeI	TCCRAC	2 cut(s)	250, 561
MseI	TTAA	1 cut(s)	999
MslI	CAYNNNNRTG	1 cut(s)	267
MspI	CCGG	5 cut(s)	232, 413, 539, 872, 887
MvaI	CCWGG	6 cut(s)	31, 99, 470, 548, 762, 813
MwoI	GCNNNNNNNGC	3 cut(s)	35, 638, 1020
NciI	CCSGG	4 cut(s)	232, 233, 414, 539
NcoI	CCATGG	1 cut(s)	299
NdeII	GATC	7 cut(s)	191, 238, 384, 550, 729, 787, 1045
NheI	GCTAGC	1 cut(s)	34
NlaIII	CATG	6 cut(s)	25, 199, 266, 303, 500, 536
NlaIV	GGNNCC	3 cut(s)	86, 96, 699
NmuCI	GTSAC	1 cut(s)	937
PaeR7I	CTCGAG	1 cut(s)	507
PagI	TCATGA	1 cut(s)	262
PasI	CCCWGGG	1 cut(s)	812
PceI	AGGCCT	1 cut(s)	976
PciSI	GCTCTTC	1 cut(s)	495
PfeI	GAWTC	2 cut(s)	322, 1125
PflFI	GACNNNGTC	1 cut(s)	377
PfoI	TCCNGGA	1 cut(s)	468
PkrI	GCNGC	4 cut(s)	615, 809, 885, 1013
PleI	GAGTC	1 cut(s)	586
PpsI	GAGTC	1 cut(s)	586
Ppu21I	YACGTR	1 cut(s)	150
PpuMI	RGGWCCY	1 cut(s)	466
PsiI	TTATAA	1 cut(s)	960
Psp5II	RGGWCCY	1 cut(s)	466
Psp6I	CCWGG	6 cut(s)	29, 97, 468, 546, 760, 811
PspGI	CCWGG	6 cut(s)	29, 97, 468, 546, 760, 811
PspN4I	GGNNCC	3 cut(s)	86, 96, 699
PspPI	GGNCC	4 cut(s)	187, 296, 466, 654
PspPPI	RGGWCCY	1 cut(s)	466
PspXI	VCTCGAGB	1 cut(s)	507
PstI	CTGCAG	1 cut(s)	885
PsuI	RGATCY	3 cut(s)	384, 729, 1045
PsyI	GACNNNGTC	1 cut(s)	377
RsaI	GTAC	1 cut(s)	1097
RsaNI	GTAC	1 cut(s)	1096
RseI	CAYNNNNRTG	1 cut(s)	267
Rsr2I	CGGWCCG	1 cut(s)	187
RsrII	CGGWCCG	1 cut(s)	187
SapI	GCTCTTC	1 cut(s)	495
SaqAI	TTAA	1 cut(s)	999
SatI	GCNGC	4 cut(s)	614, 808, 884, 1012
Sau3AI	GATC	7 cut(s)	191, 238, 384, 550, 729, 787, 1045
Sau96I	GGNCC	4 cut(s)	187, 296, 466, 654
SchI	GAGTC	1 cut(s)	587
SduI	GDGCHC	1 cut(s)	776
SfaNI	GCATC	1 cut(s)	551
SfcI	CTRYAG	2 cut(s)	6, 881
Sfr274I	CTCGAG	1 cut(s)	507
SinI	GGWCC	3 cut(s)	187, 296, 466
SlaI	CTCGAG	1 cut(s)	507
SmaI	CCCGGG	1 cut(s)	233
SmiMI	CAYNNNNRTG	1 cut(s)	267
SmlI	CTYRAG	1 cut(s)	507
SmoI	CTYRAG	1 cut(s)	507
Sse9I	AATT	5 cut(s)	107, 121, 440, 746, 905
SseBI	AGGCCT	1 cut(s)	976
SsiI	CCGC	5 cut(s)	158, 185, 639, 780, 808
SspMI	CTAG	4 cut(s)	35, 567, 860, 1061
StuI	AGGCCT	1 cut(s)	976
StyI	CCWWGG	4 cut(s)	299, 566, 951, 1080
TaaI	ACNGT	4 cut(s)	217, 436, 595, 857
TaiI	ACGT	5 cut(s)	152, 257, 271, 944, 1097
TaqI	TCGA	2 cut(s)	372, 508
TasI	AATT	5 cut(s)	107, 121, 440, 746, 905
TauI	GCSGC	1 cut(s)	810
TfiI	GAWTC	2 cut(s)	322, 1125
Tru1I	TTAA	1 cut(s)	999
Tru9I	TTAA	1 cut(s)	999
TscAI	CASTG	2 cut(s)	78, 860
TseFI	GTSAC	1 cut(s)	937
TseI	GCWGC	3 cut(s)	613, 883, 1011
Tsp45I	GTSAC	1 cut(s)	937
TspDTI	ATGAA	2 cut(s)	279, 482
TspGWI	ACGGA	2 cut(s)	722, 845
TspMI	CCCGGG	1 cut(s)	231
TspRI	CASTG	2 cut(s)	78, 860
Tth111I	GACNNNGTC	1 cut(s)	377
VpaK11BI	GGWCC	3 cut(s)	187, 296, 466
XapI	RAATTY	2 cut(s)	107, 905
XcmI	CCANNNNNNNNNTGG	1 cut(s)	439
XhoI	CTCGAG	1 cut(s)	507
XmaI	CCCGGG	1 cut(s)	231
XmaJI	CCTAGG	1 cut(s)	566
XspI	CTAG	4 cut(s)	35, 567, 860, 1061
ZraI	GACGTC	1 cut(s)	942

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.