Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 264 |
| Acc16I | TGCGCA | 1 cut(s) | 867 |
| AccBSI | CCGCTC | 1 cut(s) | 309 |
| AccI | GTMKAC | 1 cut(s) | 744 |
| AccIII | TCCGGA | 1 cut(s) | 529 |
| AciI | CCGC | 4 cut(s) | 307, 401, 404, 800 |
| AclI | AACGTT | 1 cut(s) | 340 |
| AclWI | GGATC | 4 cut(s) | 74, 240, 397, 826 |
| AcoI | YGGCCR | 1 cut(s) | 334 |
| AcuI | CTGAAG | 2 cut(s) | 531, 879 |
| AcyI | GRCGYC | 1 cut(s) | 261 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 352, 604, 915 |
| AgsI | TTSAA | 2 cut(s) | 13, 620 |
| AjnI | CCWGG | 2 cut(s) | 94, 228 |
| AluBI | AGCT | 4 cut(s) | 188, 535, 575, 645 |
| AluI | AGCT | 4 cut(s) | 188, 535, 575, 645 |
| Alw26I | GTCTC | 2 cut(s) | 283, 359 |
| AlwI | GGATC | 4 cut(s) | 74, 240, 397, 826 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 374 |
| Aor13HI | TCCGGA | 1 cut(s) | 529 |
| AoxI | GGCC | 6 cut(s) | 334, 446, 685, 761, 854, 884 |
| ApeKI | GCWGC | 1 cut(s) | 670 |
| AspLEI | GCGC | 2 cut(s) | 172, 868 |
| AspS9I | GGNCC | 3 cut(s) | 561, 854, 884 |
| AsuC2I | CCSGG | 2 cut(s) | 179, 916 |
| AsuHPI | GGTGA | 1 cut(s) | 58 |
| AvaII | GGWCC | 1 cut(s) | 561 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 363, 396 |
| BalI | TGGCCA | 1 cut(s) | 336 |
| BbvI | GCAGC | 1 cut(s) | 682 |
| BccI | CCATC | 4 cut(s) | 17, 218, 617, 875 |
| BceAI | ACGGC | 2 cut(s) | 183, 747 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 639, 673 |
| BciT130I | CCWGG | 2 cut(s) | 96, 230 |
| BciVI | GTATCC | 1 cut(s) | 203 |
| BcnI | CCSGG | 2 cut(s) | 179, 916 |
| BcoDI | GTCTC | 2 cut(s) | 283, 359 |
| BfaI | CTAG | 3 cut(s) | 296, 425, 689 |
| BfoI | RGCGCY | 1 cut(s) | 173 |
| BfuI | GTATCC | 1 cut(s) | 203 |
| BglII | AGATCT | 1 cut(s) | 36 |
| BisI | GCNGC | 3 cut(s) | 307, 402, 671 |
| BlsI | GCNGC | 3 cut(s) | 308, 403, 672 |
| Bme1390I | CCNGG | 4 cut(s) | 96, 179, 230, 916 |
| Bme18I | GGWCC | 1 cut(s) | 561 |
| BmgT120I | GGNCC | 3 cut(s) | 561, 854, 884 |
| BmiI | GGNNCC | 4 cut(s) | 486, 562, 735, 900 |
| BmrFI | CCNGG | 4 cut(s) | 96, 179, 230, 916 |
| BmsI | GCATC | 2 cut(s) | 69, 501 |
| BpmI | CTGGAG | 1 cut(s) | 237 |
| BpuEI | CTTGAG | 1 cut(s) | 555 |
| BpuMI | CCSGG | 2 cut(s) | 179, 916 |
| BsaBI | GATNNNNATC | 2 cut(s) | 515, 823 |
| BsaHI | GRCGYC | 1 cut(s) | 261 |
| BsaJI | CCNNGG | 4 cut(s) | 178, 729, 738, 828 |
| BsaWI | WCCGGW | 1 cut(s) | 529 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 718, 748 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 352, 604, 915 |
| Bse118I | RCCGGY | 1 cut(s) | 886 |
| Bse1I | ACTGG | 1 cut(s) | 254 |
| Bse8I | GATNNNNATC | 2 cut(s) | 515, 823 |
| BseAI | TCCGGA | 1 cut(s) | 529 |
| BseBI | CCWGG | 2 cut(s) | 96, 230 |
| BseDI | CCNNGG | 4 cut(s) | 178, 729, 738, 828 |
| BseGI | GGATG | 1 cut(s) | 616 |
| BseJI | GATNNNNATC | 2 cut(s) | 515, 823 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 352, 604, 915 |
| BseMII | CTCAG | 2 cut(s) | 45, 837 |
| BseNI | ACTGG | 1 cut(s) | 254 |
| BseRI | GAGGAG | 1 cut(s) | 620 |
| BseXI | GCAGC | 1 cut(s) | 682 |
| BsgI | GTGCAG | 1 cut(s) | 298 |
| BshFI | GGCC | 6 cut(s) | 336, 448, 687, 763, 856, 886 |
| BsiSI | CCGG | 6 cut(s) | 178, 196, 445, 530, 887, 915 |
| BslFI | GGGAC | 2 cut(s) | 148, 574 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 352, 604, 915 |
| BsmAI | GTCTC | 2 cut(s) | 283, 359 |
| BsmFI | GGGAC | 2 cut(s) | 148, 574 |
| BsmI | GAATGC | 1 cut(s) | 87 |
| BsnI | GGCC | 6 cut(s) | 336, 448, 687, 763, 856, 886 |
| Bsp13I | TCCGGA | 1 cut(s) | 529 |
| Bsp143I | GATC | 7 cut(s) | 36, 66, 232, 389, 411, 613, 818 |
| Bsp19I | CCATGG | 1 cut(s) | 828 |
| BspACI | CCGC | 4 cut(s) | 307, 401, 404, 800 |
| BspANI | GGCC | 6 cut(s) | 336, 448, 687, 763, 856, 886 |
| BspCNI | CTCAG | 2 cut(s) | 44, 838 |
| BspEI | TCCGGA | 1 cut(s) | 529 |
| BspLI | GGNNCC | 4 cut(s) | 486, 562, 735, 900 |
| BspPI | GGATC | 4 cut(s) | 74, 240, 397, 826 |
| BsrBI | CCGCTC | 1 cut(s) | 309 |
| BsrFI | RCCGGY | 1 cut(s) | 886 |
| BsrI | ACTGG | 1 cut(s) | 254 |
| BssAI | RCCGGY | 1 cut(s) | 886 |
| BssECI | CCNNGG | 4 cut(s) | 178, 729, 738, 828 |
| BssMI | GATC | 7 cut(s) | 36, 66, 232, 389, 411, 613, 818 |
| BssNI | GRCGYC | 1 cut(s) | 261 |
| BssT1I | CCWWGG | 2 cut(s) | 738, 828 |
| Bst2UI | CCWGG | 2 cut(s) | 96, 230 |
| Bst6I | CTCTTC | 1 cut(s) | 703 |
| BstACI | GRCGYC | 1 cut(s) | 261 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 874 |
| BstC8I | GCNNGC | 3 cut(s) | 399, 761, 888 |
| BstDEI | CTNAG | 5 cut(s) | 31, 272, 348, 702, 846 |
| BstDSI | CCRYGG | 2 cut(s) | 729, 828 |
| BstEII | GGTNACC | 1 cut(s) | 724 |
| BstF5I | GGATG | 1 cut(s) | 616 |
| BstH2I | RGCGCY | 1 cut(s) | 173 |
| BstHHI | GCGC | 2 cut(s) | 172, 868 |
| BstKTI | GATC | 7 cut(s) | 39, 69, 235, 392, 414, 616, 821 |
| BstMAI | GTCTC | 2 cut(s) | 283, 359 |
| BstMBI | GATC | 7 cut(s) | 36, 66, 232, 389, 411, 613, 818 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 312, 342, 532, 874, 883 |
| BstNI | CCWGG | 2 cut(s) | 96, 230 |
| BstPI | GGTNACC | 1 cut(s) | 724 |
| BstSCI | CCNGG | 4 cut(s) | 94, 177, 228, 914 |
| BstV1I | GCAGC | 1 cut(s) | 682 |
| BstX2I | RGATCY | 3 cut(s) | 36, 66, 818 |
| BstYI | RGATCY | 3 cut(s) | 36, 66, 818 |
| BsuI | GTATCC | 1 cut(s) | 203 |
| BsuRI | GGCC | 6 cut(s) | 336, 448, 687, 763, 856, 886 |
| BtgI | CCRYGG | 2 cut(s) | 729, 828 |
| BtsCI | GGATG | 1 cut(s) | 616 |
| Cac8I | GCNNGC | 3 cut(s) | 399, 761, 888 |
| CaiI | CAGNNNCTG | 1 cut(s) | 374 |
| CfoI | GCGC | 2 cut(s) | 172, 868 |
| Cfr10I | RCCGGY | 1 cut(s) | 886 |
| Cfr13I | GGNCC | 3 cut(s) | 561, 854, 884 |
| CseI | GACGC | 1 cut(s) | 581 |
| CviAII | CATG | 5 cut(s) | 329, 767, 829, 878, 911 |
| DdeI | CTNAG | 5 cut(s) | 31, 272, 348, 702, 846 |
| DpnI | GATC | 7 cut(s) | 38, 68, 234, 391, 413, 615, 820 |
| DpnII | GATC | 7 cut(s) | 36, 66, 232, 389, 411, 613, 818 |
| EaeI | YGGCCR | 1 cut(s) | 334 |
| Eam1104I | CTCTTC | 1 cut(s) | 703 |
| EarI | CTCTTC | 1 cut(s) | 703 |
| Eco130I | CCWWGG | 2 cut(s) | 738, 828 |
| Eco147I | AGGCCT | 1 cut(s) | 763 |
| Eco47I | GGWCC | 1 cut(s) | 561 |
| Eco57I | CTGAAG | 2 cut(s) | 531, 879 |
| Eco91I | GGTNACC | 1 cut(s) | 724 |
| EcoO109I | RGGNCCY | 2 cut(s) | 561, 854 |
| EcoO65I | GGTNACC | 1 cut(s) | 724 |
| EcoRII | CCWGG | 2 cut(s) | 94, 228 |
| EcoT14I | CCWWGG | 2 cut(s) | 738, 828 |
| ErhI | CCWWGG | 2 cut(s) | 738, 828 |
| FaeI | CATG | 5 cut(s) | 332, 770, 832, 881, 914 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 548, 580 |
| FaqI | GGGAC | 2 cut(s) | 148, 574 |
| FatI | CATG | 5 cut(s) | 328, 766, 828, 877, 910 |
| FauI | CCCGC | 1 cut(s) | 397 |
| FblI | GTMKAC | 1 cut(s) | 744 |
| Fnu4HI | GCNGC | 3 cut(s) | 307, 402, 671 |
| FokI | GGATG | 1 cut(s) | 623 |
| Fsp4HI | GCNGC | 3 cut(s) | 307, 402, 671 |
| FspBI | CTAG | 3 cut(s) | 296, 425, 689 |
| FspI | TGCGCA | 1 cut(s) | 867 |
| GlaI | GCGC | 2 cut(s) | 171, 867 |
| GluI | GCNGC | 3 cut(s) | 307, 402, 671 |
| GsuI | CTGGAG | 1 cut(s) | 237 |
| HaeII | RGCGCY | 1 cut(s) | 173 |
| HaeIII | GGCC | 6 cut(s) | 336, 448, 687, 763, 856, 886 |
| HapII | CCGG | 6 cut(s) | 178, 196, 445, 530, 887, 915 |
| HgaI | GACGC | 1 cut(s) | 581 |
| HhaI | GCGC | 2 cut(s) | 172, 868 |
| Hin1I | GRCGYC | 1 cut(s) | 261 |
| Hin1II | CATG | 5 cut(s) | 332, 770, 832, 881, 914 |
| Hin6I | GCGC | 2 cut(s) | 170, 866 |
| HinP1I | GCGC | 2 cut(s) | 170, 866 |
| HincII | GTYRAC | 1 cut(s) | 259 |
| HindII | GTYRAC | 1 cut(s) | 259 |
| HindIII | AAGCTT | 1 cut(s) | 573 |
| HinfI | GANTC | 4 cut(s) | 276, 325, 359, 824 |
| HpaII | CCGG | 6 cut(s) | 178, 196, 445, 530, 887, 915 |
| HphI | GGTGA | 1 cut(s) | 58 |
| Hpy166II | GTNNAC | 3 cut(s) | 160, 259, 745 |
| Hpy188I | TCNGA | 6 cut(s) | 34, 237, 266, 364, 774, 823 |
| Hpy188III | TCNNGA | 3 cut(s) | 10, 530, 617 |
| Hpy8I | GTNNAC | 3 cut(s) | 160, 259, 745 |
| Hpy99I | CGWCG | 1 cut(s) | 597 |
| HpyAV | CCTTC | 5 cut(s) | 346, 459, 715, 748, 854 |
| HpyCH4IV | ACGT | 2 cut(s) | 261, 340 |
| HpyCH4V | TGCA | 5 cut(s) | 82, 315, 514, 670, 877 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 312, 342, 532, 874, 883 |
| HpyF3I | CTNAG | 5 cut(s) | 31, 272, 348, 702, 846 |
| HpySE526I | ACGT | 2 cut(s) | 261, 340 |
| Hsp92I | GRCGYC | 1 cut(s) | 261 |
| Hsp92II | CATG | 5 cut(s) | 332, 770, 832, 881, 914 |
| HspAI | GCGC | 2 cut(s) | 170, 866 |
| Kpn2I | TCCGGA | 1 cut(s) | 529 |
| KroI | GCCGGC | 1 cut(s) | 886 |
| KroNI | GCCGGC | 1 cut(s) | 888 |
| Kzo9I | GATC | 7 cut(s) | 36, 66, 232, 389, 411, 613, 818 |
| LmnI | GCTCC | 4 cut(s) | 9, 314, 532, 739 |
| Lsp1109I | GCAGC | 1 cut(s) | 682 |
| LweI | GCATC | 2 cut(s) | 69, 501 |
| MaeI | CTAG | 3 cut(s) | 296, 425, 689 |
| MaeII | ACGT | 2 cut(s) | 261, 340 |
| MaeIII | GTNAC | 1 cut(s) | 724 |
| MalI | GATC | 7 cut(s) | 38, 68, 234, 391, 413, 615, 820 |
| MbiI | CCGCTC | 1 cut(s) | 309 |
| MboI | GATC | 7 cut(s) | 36, 66, 232, 389, 411, 613, 818 |
| MboII | GAAGA | 7 cut(s) | 368, 450, 453, 514, 632, 690, 763 |
| MflI | RGATCY | 3 cut(s) | 36, 66, 818 |
| MlsI | TGGCCA | 1 cut(s) | 336 |
| MluCI | AATT | 1 cut(s) | 138 |
| MluNI | TGGCCA | 1 cut(s) | 336 |
| MmeI | TCCRAC | 2 cut(s) | 33, 752 |
| Mox20I | TGGCCA | 1 cut(s) | 336 |
| MroI | TCCGGA | 1 cut(s) | 529 |
| MroNI | GCCGGC | 1 cut(s) | 886 |
| MscI | TGGCCA | 1 cut(s) | 336 |
| MseI | TTAA | 2 cut(s) | 497, 555 |
| Msp20I | TGGCCA | 1 cut(s) | 336 |
| MspI | CCGG | 6 cut(s) | 178, 196, 445, 530, 887, 915 |
| MspR9I | CCNGG | 4 cut(s) | 96, 179, 230, 916 |
| Mva1269I | GAATGC | 1 cut(s) | 87 |
| MvaI | CCWGG | 2 cut(s) | 96, 230 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 312, 342, 532, 874, 883 |
| NaeI | GCCGGC | 1 cut(s) | 888 |
| NciI | CCSGG | 2 cut(s) | 179, 916 |
| NcoI | CCATGG | 1 cut(s) | 828 |
| NdeII | GATC | 7 cut(s) | 36, 66, 232, 389, 411, 613, 818 |
| NgoMIV | GCCGGC | 1 cut(s) | 886 |
| NlaIII | CATG | 5 cut(s) | 332, 770, 832, 881, 914 |
| NlaIV | GGNNCC | 4 cut(s) | 486, 562, 735, 900 |
| NsbI | TGCGCA | 1 cut(s) | 867 |
| PceI | AGGCCT | 1 cut(s) | 763 |
| PctI | GAATGC | 1 cut(s) | 87 |
| PdiI | GCCGGC | 1 cut(s) | 888 |
| PfeI | GAWTC | 4 cut(s) | 276, 325, 359, 824 |
| PkrI | GCNGC | 3 cut(s) | 308, 403, 672 |
| PpuMI | RGGWCCY | 1 cut(s) | 561 |
| Psp1406I | AACGTT | 1 cut(s) | 340 |
| Psp5II | RGGWCCY | 1 cut(s) | 561 |
| Psp6I | CCWGG | 2 cut(s) | 94, 228 |
| PspEI | GGTNACC | 1 cut(s) | 724 |
| PspGI | CCWGG | 2 cut(s) | 94, 228 |
| PspN4I | GGNNCC | 4 cut(s) | 486, 562, 735, 900 |
| PspPI | GGNCC | 3 cut(s) | 561, 854, 884 |
| PspPPI | RGGWCCY | 1 cut(s) | 561 |
| PstNI | CAGNNNCTG | 1 cut(s) | 374 |
| PsuI | RGATCY | 3 cut(s) | 36, 66, 818 |
| SaqAI | TTAA | 2 cut(s) | 497, 555 |
| SatI | GCNGC | 3 cut(s) | 307, 402, 671 |
| Sau3AI | GATC | 7 cut(s) | 36, 66, 232, 389, 411, 613, 818 |
| Sau96I | GGNCC | 3 cut(s) | 561, 854, 884 |
| ScrFI | CCNGG | 4 cut(s) | 96, 179, 230, 916 |
| SfaNI | GCATC | 2 cut(s) | 69, 501 |
| SinI | GGWCC | 1 cut(s) | 561 |
| SmlI | CTYRAG | 1 cut(s) | 570 |
| SmoI | CTYRAG | 1 cut(s) | 570 |
| Sse9I | AATT | 1 cut(s) | 138 |
| SseBI | AGGCCT | 1 cut(s) | 763 |
| SsiI | CCGC | 4 cut(s) | 307, 401, 404, 800 |
| SspMI | CTAG | 3 cut(s) | 296, 425, 689 |
| StuI | AGGCCT | 1 cut(s) | 763 |
| StyD4I | CCNGG | 4 cut(s) | 94, 177, 228, 914 |
| StyI | CCWWGG | 2 cut(s) | 738, 828 |
| TaiI | ACGT | 2 cut(s) | 264, 343 |
| TaqI | TCGA | 1 cut(s) | 410 |
| TaqII | GACCGA | 1 cut(s) | 649 |
| TasI | AATT | 1 cut(s) | 138 |
| TauI | GCSGC | 2 cut(s) | 309, 404 |
| TfiI | GAWTC | 4 cut(s) | 276, 325, 359, 824 |
| Tru1I | TTAA | 2 cut(s) | 497, 555 |
| Tru9I | TTAA | 2 cut(s) | 497, 555 |
| TseI | GCWGC | 1 cut(s) | 670 |
| VpaK11BI | GGWCC | 1 cut(s) | 561 |
| XmiI | GTMKAC | 1 cut(s) | 744 |
| XspI | CTAG | 3 cut(s) | 296, 425, 689 |
| ZraI | GACGTC | 1 cut(s) | 262 |