Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006720.1

Orthogroup ID

OG0000172

Physical Location & Seq

Genomic Coordinates Reverse (-)

25215 .. 26443

Gene Structure 1229 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006720.1_g000008.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1038 bp

atggctgcagcgaacgcatccatgactgccagacttgcgactaaactgtcgctcaaggagggagaagaaccagttgatttggggaatctccgagttcaggggaaagagtttttggctcggaatttctatttggtaggaaggctcaataattgcagggggatgatgctggattcattccggagcgcggtaagatctatgtggaggttgactggaaccgtggaggtacaaccaaggggtgaccgttttctgtttacattcacccatgacagggatgttgctagagtaaagaatggaggaccgtgggaacctaccgtccggttggttggtgggacaattggcgaggtgctggaggtggatcgtccggcgctgcgtaggggcgatgctcaagttaggcttgttctatccatccatgatccggtgcgtctcgaccgtagggttagggtttctccctctgacgtcctaaccctaagattcagggtggacgagttggcagctgatgctggggcggagcagggatcacaaacggctggtggaccgatcgttccagcccttgtctttagggcaaacgttcagccctccatctcttctccattgatctctactttcaaggtccctggcttgtcgaagaagaaaccggtacagattcgtgagcttcctgcgcttgcgttgtctggtactgagggtacctccacccacactcaagtggtggggatgcgccggcccagggctgaagatgctcctgcggatggtaagcgagccaagcatggcttggctttggcgcttgtaaccctgcaaccggaaaatcttgggttcgagttctctgatgcaggtttggtaggtgggaagctgtctcaaggccctaaggtctacaagaagaagggcaggcctcggggttcgcgtaacaaagtcaaagcggcatcggtgtcagccaccgtggatgactctgggtctatggagtcggggccctttgatggtggttctgttggcatgcctgagaggcctaatgggctggctaagcctgtttcccagtccgggtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005829 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006979 GO:0008150 GO:0008152 GO:0009505 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0016020 GO:0016491 GO:0016614 GO:0016899 GO:0030054 GO:0030312 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048046 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0055114 GO:0071944 GO:0098542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BBE FAD_binding_4

Protein Analysis

345

Amino Acids

36.98

Weight (kDa)

10.31

Isoelectric Point (pI)

38.19

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000172)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G59650 AT3G59650
fragaria_vesca	FvH4_1g19981 FvH4_1g22221 FvH4_2g13530 FvH4_2g13791 FvH4_2g14332 FvH4_2g14911 FvH4_2g16332 FvH4_3g10980 FvH4_3g11141 FvH4_3g14171 FvH4_3g26311 FvH4_3g28254 FvH4_3g29741 FvH4_4g05261 FvH4_4g12002 FvH4_4g13371 FvH4_4g15541 FvH4_4g18531 FvH4_5g02661 FvH4_5g02662 FvH4_5g16791 FvH4_5g29700 FvH4_5g35881 FvH4_5g37061 FvH4_6g01571 FvH4_6g12761 FvH4_6g14961 FvH4_6g20381 FvH4_6g22001 FvH4_6g23673 FvH4_6g23960 FvH4_6g28051 FvH4_6g31094 FvH4_6g36541 FvH4_7g00911 FvH4_7g06200 FvH4_7g06200 FvH4_7g09551
malus_domestica	MD08G1230600.v1.1
prunus_persica	Prupe.1G206900_v2.0.a1 Prupe.1G206900_v2.0.a1 Prupe.1G206900_v2.0.a1
pyrus_communis	pycom08g20050 pycom15g37590
rosa_chinensis	RchiOBHm_Chr1g0333831 RchiOBHm_Chr1g0344871 RchiOBHm_Chr3g0473241 RchiOBHm_Chr5g0018871 RchiOBHm_Chr6g0265791
rosa_laevigata	RLG00000005720 RLG00000012718 RLG00000027174 RLG00000029225 RLG00000029527
rosa_multiflora	Rmu_co8002714.1_g000001 Rmu_co8072270.1_g000001 Rmu_co8095594.1_g000001 Rmu_co8308871.1_g000001 Rmu_co8398699.1_g000001 Rmu_co8404287.1_g000001 Rmu_sc0000035.1_g000010 Rmu_sc0000133.1_g000007 Rmu_sc0000253.1_g000023 Rmu_sc0000308.1_g000010 Rmu_sc0000309.1_g000030 Rmu_sc0000515.1_g000015 Rmu_sc0000865.1_g000001 Rmu_sc0000889.1_g000005 Rmu_sc0001262.1_g000011 Rmu_sc0001518.1_g000013 Rmu_sc0001533.1_g000006 Rmu_sc0001547.1_g000007 Rmu_sc0001826.1_g000013 Rmu_sc0002060.1_g000017 Rmu_sc0002129.1_g000005 Rmu_sc0002449.1_g000016 Rmu_sc0002460.1_g000036 Rmu_sc0002475.1_g000014 Rmu_sc0002553.1_g000017 Rmu_sc0002759.1_g000033 Rmu_sc0002918.1_g000009 Rmu_sc0002955.1_g000020 Rmu_sc0003094.1_g000010 Rmu_sc0003669.1_g000009 Rmu_sc0004109.1_g000008 Rmu_sc0004350.1_g000007 Rmu_sc0004542.1_g000018 Rmu_sc0004967.1_g000005 Rmu_sc0005026.1_g000005 Rmu_sc0005369.1_g000013 Rmu_sc0005400.1_g000025 Rmu_sc0005420.1_g000006 Rmu_sc0005467.1_g000013 Rmu_sc0005497.1_g000003 Rmu_sc0005607.1_g000023 Rmu_sc0005949.1_g000008 Rmu_sc0005970.1_g000002 Rmu_sc0006452.1_g000001 Rmu_sc0006720.1_g000008 Rmu_sc0006867.1_g000004 Rmu_sc0007177.1_g000006 Rmu_sc0007199.1_g000011 Rmu_sc0007783.1_g000004 Rmu_sc0007885.1_g000006 Rmu_sc0008619.1_g000001 Rmu_sc0008709.1_g000004 Rmu_sc0008709.1_g000005 Rmu_sc0009185.1_g000029 Rmu_sc0010244.1_g000010 Rmu_sc0011610.1_g000005 Rmu_sc0011680.1_g000013 Rmu_sc0012075.1_g000003 Rmu_sc0012278.1_g000001 Rmu_sc0012628.1_g000001 Rmu_sc0018485.1_g000006 Rmu_sc0019960.1_g000001 Rmu_sc0020177.1_g000002 Rmu_sc0020656.1_g000001 Rmu_sc0021333.1_g000003 Rmu_sc0023170.1_g000002 Rmu_sc0023989.1_g000005 Rmu_sc0025259.1_g000001 Rmu_sc0025350.1_g000013 Rmu_sc0029678.1_g000002 Rmu_sc0035939.1_g000001 Rmu_sc0039260.1_g000001 Rmu_sc0039886.1_g000001 Rmu_ssc0000323.1_g000030 Rmu_ssc0000333.1_g000005 Rmu_ssc0000471.1_g000017 Rmu_ssc0000480.1_g000025
rosa_roxburghii	Rroxscaffold_1G00006060 Rroxscaffold_1G00048570 Rroxscaffold_1G00057650 Rroxscaffold_1G00072720 Rroxscaffold_4G00281190 Rroxscaffold_4G00317160 Rroxscaffold_6G00411570
rosa_rugosa	Rorug01G0004800 Rorug01G0112100 Rorug01G0206100 Rorug02G0324000 Rorug05G0305600 Rorug05G0326800 Rorug06G0018900 Rorug06G0167000 Rorug07G0031200 Rorug07G0071900
rosa_samantha	Rh1AG134700 Rh1BG103000 Rh1CG007300 Rh1CG128100 Rh1DG140100 Rh2DG579500 Rh3DG199000 Rh4BG252500 Rh5AG374900 Rh5BG146800 Rh5BG151500 Rh5DG399700
rosa_wichuraiana	Rw0G001820 Rw1G011230 Rw1G011240 Rw1G027290 Rw2G011670 Rw2G039270 Rw6G018440 Rw6G023120 Rw7G025180

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	46
AatII	GACGTC	1 cut(s)	459
Acc36I	ACCTGC	1 cut(s)	818
Acc65I	GGTACC	1 cut(s)	683
AccB1I	GGYRCC	1 cut(s)	683
AccI	GTMKAC	1 cut(s)	867
AccII	CGCG	2 cut(s)	185, 898
AccIII	TCCGGA	1 cut(s)	177
AciI	CCGC	4 cut(s)	185, 506, 743, 914
AclI	AACGTT	1 cut(s)	567
AclWI	GGATC	3 cut(s)	363, 407, 523
AcsI	RAATTY	1 cut(s)	121
AcuI	CTGAAG	1 cut(s)	750
AcyI	GRCGYC	1 cut(s)	456
AfaI	GTAC	4 cut(s)	225, 639, 676, 685
AgeI	ACCGGT	1 cut(s)	634
AgsI	TTSAA	1 cut(s)	607
AhdI	GACNNNNNGTC	1 cut(s)	946
AjnI	CCWGG	2 cut(s)	613, 722
AjuI	GAANNNNNNNTTGG	4 cut(s)	95, 113, 127, 145
AleI	CACNNNNGTG	1 cut(s)	701
AloI	GAACNNNNNNTCC	4 cut(s)	297, 329, 525, 557
AluBI	AGCT	3 cut(s)	494, 652, 847
AluI	AGCT	3 cut(s)	494, 652, 847
Alw26I	GTCTC	2 cut(s)	428, 855
AlwI	GGATC	3 cut(s)	363, 407, 523
Ama87I	CYCGRG	1 cut(s)	888
Aor13HI	TCCGGA	1 cut(s)	177
AoxI	GGCC	5 cut(s)	719, 856, 884, 962, 998
ApaI	GGGCCC	1 cut(s)	966
ApeKI	GCWGC	4 cut(s)	5, 8, 367, 491
ApoI	RAATTY	1 cut(s)	121
AsiGI	ACCGGT	1 cut(s)	634
Asp718I	GGTACC	1 cut(s)	683
AspLEI	GCGC	5 cut(s)	185, 367, 661, 717, 781
AspS9I	GGNCC	7 cut(s)	296, 533, 610, 720, 857, 962, 963
AsuC2I	CCSGG	1 cut(s)	1033
AsuHPI	GGTGA	2 cut(s)	248, 250
AvaI	CYCGRG	1 cut(s)	888
AvaII	GGWCC	3 cut(s)	296, 533, 610
AxyI	CCTNAGG	1 cut(s)	861
BaeGI	GKGCMC	1 cut(s)	966
BanI	GGYRCC	1 cut(s)	683
BanII	GRGCYC	1 cut(s)	966
BbvI	GCAGC	3 cut(s)	20, 354, 503
BccI	CCATC	4 cut(s)	413, 587, 740, 965
BceAI	ACGGC	1 cut(s)	540
BciT130I	CCWGG	2 cut(s)	615, 724
BcnI	CCSGG	1 cut(s)	1033
BcoDI	GTCTC	2 cut(s)	428, 855
BfaI	CTAG	1 cut(s)	279
BfmI	CTRYAG	1 cut(s)	6
BfoI	RGCGCY	2 cut(s)	368, 782
BfuAI	ACCTGC	1 cut(s)	818
BglI	GCCNNNNNGGC	2 cut(s)	997, 1006
BglII	AGATCT	1 cut(s)	191
BisI	GCNGC	5 cut(s)	6, 9, 368, 492, 915
BlpI	GCTNAGC	1 cut(s)	1014
BlsI	GCNGC	5 cut(s)	7, 10, 369, 493, 916
Bme1390I	CCNGG	3 cut(s)	615, 724, 1033
Bme18I	GGWCC	3 cut(s)	296, 533, 610
BmeRI	GACNNNNNGTC	1 cut(s)	946
BmeT110I	CYCGRG	1 cut(s)	888
BmgT120I	GGNCC	7 cut(s)	296, 533, 610, 720, 857, 962, 963
BmiI	GGNNCC	6 cut(s)	214, 306, 612, 685, 963, 964
BmrFI	CCNGG	3 cut(s)	615, 724, 1033
BmrI	ACTGGG	1 cut(s)	1021
BmsI	GCATC	8 cut(s)	26, 153, 370, 487, 702, 724, 814, 926
BmuI	ACTGGG	1 cut(s)	1021
BplI	GAGNNNNNCTC	2 cut(s)	671, 703
BpmI	CTGGAG	1 cut(s)	368
Bpu1102I	GCTNAGC	1 cut(s)	1014
BpuEI	CTTGAG	4 cut(s)	38, 369, 684, 837
BpuMI	CCSGG	1 cut(s)	1033
BsaHI	GRCGYC	1 cut(s)	456
BsaJI	CCNNGG	8 cut(s)	216, 230, 299, 613, 722, 723, 887, 933
BsaWI	WCCGGW	5 cut(s)	177, 315, 415, 634, 796
Bse118I	RCCGGY	2 cut(s)	634, 717
Bse1I	ACTGG	3 cut(s)	71, 214, 1027
Bse21I	CCTNAGG	1 cut(s)	861
BseAI	TCCGGA	1 cut(s)	177
BseBI	CCWGG	2 cut(s)	615, 724
BseDI	CCNNGG	8 cut(s)	216, 230, 299, 613, 722, 723, 887, 933
BseGI	GGATG	7 cut(s)	17, 165, 277, 405, 717, 751, 943
BseMII	CTCAG	2 cut(s)	669, 984
BseNI	ACTGG	3 cut(s)	71, 214, 1027
BseSI	GKGCMC	1 cut(s)	966
BseXI	GCAGC	3 cut(s)	20, 354, 503
BseYI	CCCAGC	1 cut(s)	500
Bsh1236I	CGCG	2 cut(s)	185, 898
Bsh1285I	CGRYCG	2 cut(s)	430, 540
BshFI	GGCC	5 cut(s)	721, 858, 886, 964, 1000
BshNI	GGYRCC	1 cut(s)	683
BshTI	ACCGGT	1 cut(s)	634
BsiEI	CGRYCG	2 cut(s)	430, 540
BsiHKCI	CYCGRG	1 cut(s)	888
BsiSI	CCGG	8 cut(s)	178, 316, 362, 416, 635, 718, 797, 1032
BslFI	GGGAC	2 cut(s)	343, 596
BsmAI	GTCTC	2 cut(s)	428, 855
BsmBI	CGTCTC	1 cut(s)	428
BsmFI	GGGAC	2 cut(s)	343, 596
BsnI	GGCC	5 cut(s)	721, 858, 886, 964, 1000
BsoBI	CYCGRG	1 cut(s)	888
Bsp120I	GGGCCC	1 cut(s)	962
Bsp1286I	GDGCHC	1 cut(s)	966
Bsp13I	TCCGGA	1 cut(s)	177
Bsp143I	GATC	6 cut(s)	191, 355, 412, 515, 537, 594
Bsp1720I	GCTNAGC	1 cut(s)	1014
BspACI	CCGC	4 cut(s)	185, 506, 743, 914
BspANI	GGCC	5 cut(s)	721, 858, 886, 964, 1000
BspCNI	CTCAG	2 cut(s)	670, 985
BspEI	TCCGGA	1 cut(s)	177
BspFNI	CGCG	2 cut(s)	185, 898
BspLI	GGNNCC	6 cut(s)	214, 306, 612, 685, 963, 964
BspMAI	CTGCAG	1 cut(s)	10
BspMI	ACCTGC	1 cut(s)	818
BspPI	GGATC	3 cut(s)	363, 407, 523
BspT107I	GGYRCC	1 cut(s)	683
BsrFI	RCCGGY	2 cut(s)	634, 717
BsrI	ACTGG	3 cut(s)	71, 214, 1027
BssAI	RCCGGY	2 cut(s)	634, 717
BssECI	CCNNGG	8 cut(s)	216, 230, 299, 613, 722, 723, 887, 933
BssMI	GATC	6 cut(s)	191, 355, 412, 515, 537, 594
BssNI	GRCGYC	1 cut(s)	456
BssT1I	CCWWGG	1 cut(s)	230
Bst2UI	CCWGG	2 cut(s)	615, 724
Bst4CI	ACNGT	7 cut(s)	48, 217, 242, 300, 313, 431, 934
Bst6I	CTCTTC	1 cut(s)	589
BstACI	GRCGYC	1 cut(s)	456
BstAPI	GCANNNNNTGC	1 cut(s)	497
BstC8I	GCNNGC	6 cut(s)	663, 719, 756, 884, 989, 1011
BstDEI	CTNAG	5 cut(s)	467, 678, 861, 993, 1014
BstDSI	CCRYGG	3 cut(s)	216, 299, 933
BstEII	GGTNACC	1 cut(s)	236
BstF5I	GGATG	7 cut(s)	17, 165, 277, 405, 717, 751, 943
BstFNI	CGCG	2 cut(s)	185, 898
BstH2I	RGCGCY	2 cut(s)	368, 782
BstHHI	GCGC	5 cut(s)	185, 367, 661, 717, 781
BstKTI	GATC	6 cut(s)	194, 358, 415, 518, 540, 597
BstMAI	GTCTC	2 cut(s)	428, 855
BstMBI	GATC	6 cut(s)	191, 355, 412, 515, 537, 594
BstMCI	CGRYCG	2 cut(s)	430, 540
BstMWI	GCNNNNNNNGC	9 cut(s)	14, 35, 497, 658, 734, 760, 997, 1006, 1015
BstNI	CCWGG	2 cut(s)	615, 724
BstNSI	RCATGY	1 cut(s)	991
BstPI	GGTNACC	1 cut(s)	236
BstSCI	CCNGG	3 cut(s)	613, 722, 1031
BstSFI	CTRYAG	1 cut(s)	6
BstSLI	GKGCMC	1 cut(s)	966
BstUI	CGCG	2 cut(s)	185, 898
BstV1I	GCAGC	3 cut(s)	20, 354, 503
BstX2I	RGATCY	1 cut(s)	191
BstYI	RGATCY	1 cut(s)	191
Bsu36I	CCTNAGG	1 cut(s)	861
BsuRI	GGCC	5 cut(s)	721, 858, 886, 964, 1000
BtgI	CCRYGG	3 cut(s)	216, 299, 933
BtgZI	GCGATG	1 cut(s)	393
BtsCI	GGATG	7 cut(s)	17, 165, 277, 405, 717, 751, 943
BveI	ACCTGC	1 cut(s)	818
Cac8I	GCNNGC	6 cut(s)	663, 719, 756, 884, 989, 1011
CfoI	GCGC	5 cut(s)	185, 367, 661, 717, 781
Cfr10I	RCCGGY	2 cut(s)	634, 717
Cfr13I	GGNCC	7 cut(s)	296, 533, 610, 720, 857, 962, 963
CseI	GACGC	1 cut(s)	410
Csp6I	GTAC	4 cut(s)	224, 638, 675, 684
CspAI	ACCGGT	1 cut(s)	634
CviAII	CATG	5 cut(s)	22, 263, 410, 764, 988
CviQI	GTAC	4 cut(s)	224, 638, 675, 684
DdeI	CTNAG	5 cut(s)	467, 678, 861, 993, 1014
DpnI	GATC	6 cut(s)	193, 357, 414, 517, 539, 596
DpnII	GATC	6 cut(s)	191, 355, 412, 515, 537, 594
DrdI	GACNNNNNNGTC	1 cut(s)	46
DriI	GACNNNNNGTC	1 cut(s)	946
DseDI	GACNNNNNNGTC	1 cut(s)	46
Eam1104I	CTCTTC	1 cut(s)	589
Eam1105I	GACNNNNNGTC	1 cut(s)	946
EarI	CTCTTC	1 cut(s)	589
EciI	GGCGGA	1 cut(s)	521
Eco130I	CCWWGG	1 cut(s)	230
Eco147I	AGGCCT	2 cut(s)	886, 1000
Eco24I	GRGCYC	1 cut(s)	966
Eco47I	GGWCC	3 cut(s)	296, 533, 610
Eco57I	CTGAAG	1 cut(s)	750
Eco81I	CCTNAGG	1 cut(s)	861
Eco88I	CYCGRG	1 cut(s)	888
Eco91I	GGTNACC	1 cut(s)	236
EcoO109I	RGGNCCY	4 cut(s)	610, 857, 962, 963
EcoO65I	GGTNACC	1 cut(s)	236
EcoRII	CCWGG	2 cut(s)	613, 722
EcoT14I	CCWWGG	1 cut(s)	230
EcoT38I	GRGCYC	1 cut(s)	966
ErhI	CCWWGG	1 cut(s)	230
Esp3I	CGTCTC	1 cut(s)	428
FaeI	CATG	5 cut(s)	25, 266, 413, 767, 991
FaiI	YATR	7 cut(s)	23, 197, 264, 411, 765, 953, 989
FalI	AAGNNNNNCTT	4 cut(s)	378, 410, 752, 784
FaqI	GGGAC	2 cut(s)	343, 596
FatI	CATG	5 cut(s)	21, 262, 409, 763, 987
FblI	GTMKAC	1 cut(s)	867
Fnu4HI	GCNGC	5 cut(s)	6, 9, 368, 492, 915
FokI	GGATG	7 cut(s)	4, 172, 284, 392, 724, 758, 950
FriOI	GRGCYC	1 cut(s)	966
Fsp4HI	GCNGC	5 cut(s)	6, 9, 368, 492, 915
FspBI	CTAG	1 cut(s)	279
GlaI	GCGC	5 cut(s)	184, 366, 660, 716, 780
GluI	GCNGC	5 cut(s)	6, 9, 368, 492, 915
GsaI	CCCAGC	1 cut(s)	504
GsuI	CTGGAG	1 cut(s)	368
HaeII	RGCGCY	2 cut(s)	368, 782
HaeIII	GGCC	5 cut(s)	721, 858, 886, 964, 1000
HapII	CCGG	8 cut(s)	178, 316, 362, 416, 635, 718, 797, 1032
HgaI	GACGC	1 cut(s)	410
HhaI	GCGC	5 cut(s)	185, 367, 661, 717, 781
Hin1I	GRCGYC	1 cut(s)	456
Hin1II	CATG	5 cut(s)	25, 266, 413, 767, 991
Hin6I	GCGC	5 cut(s)	183, 365, 659, 715, 779
HinP1I	GCGC	5 cut(s)	183, 365, 659, 715, 779
HincII	GTYRAC	1 cut(s)	207
HindII	GTYRAC	1 cut(s)	207
HinfI	GANTC	6 cut(s)	85, 170, 471, 643, 941, 956
HpaII	CCGG	8 cut(s)	178, 316, 362, 416, 635, 718, 797, 1032
HphI	GGTGA	2 cut(s)	248, 250
Hpy166II	GTNNAC	5 cut(s)	207, 252, 481, 533, 868
Hpy188I	TCNGA	4 cut(s)	92, 120, 454, 823
Hpy188III	TCNNGA	3 cut(s)	178, 425, 647
Hpy8I	GTNNAC	5 cut(s)	207, 252, 481, 533, 868
HpyAV	CCTTC	2 cut(s)	132, 871
HpyCH4III	ACNGT	7 cut(s)	48, 217, 242, 300, 313, 431, 934
HpyCH4IV	ACGT	2 cut(s)	456, 567
HpyCH4V	TGCA	4 cut(s)	8, 153, 793, 827
HpyF10VI	GCNNNNNNNGC	9 cut(s)	14, 35, 497, 658, 734, 760, 997, 1006, 1015
HpyF3I	CTNAG	5 cut(s)	467, 678, 861, 993, 1014
HpySE526I	ACGT	2 cut(s)	456, 567
Hsp92I	GRCGYC	1 cut(s)	456
Hsp92II	CATG	5 cut(s)	25, 266, 413, 767, 991
HspAI	GCGC	5 cut(s)	183, 365, 659, 715, 779
Kpn2I	TCCGGA	1 cut(s)	177
KpnI	GGTACC	1 cut(s)	687
KroI	GCCGGC	1 cut(s)	717
KroNI	GCCGGC	1 cut(s)	719
Kzo9I	GATC	6 cut(s)	191, 355, 412, 515, 537, 594
LmnI	GCTCC	3 cut(s)	180, 508, 742
Lsp1109I	GCAGC	3 cut(s)	20, 354, 503
LweI	GCATC	8 cut(s)	26, 153, 370, 487, 702, 724, 814, 926
MaeI	CTAG	1 cut(s)	279
MaeII	ACGT	2 cut(s)	456, 567
MaeIII	GTNAC	3 cut(s)	236, 784, 899
MalI	GATC	6 cut(s)	193, 357, 414, 517, 539, 596
MboI	GATC	6 cut(s)	191, 355, 412, 515, 537, 594
MboII	GAAGA	6 cut(s)	77, 576, 637, 640, 743, 886
MfeI	CAATTG	1 cut(s)	333
MflI	RGATCY	1 cut(s)	191
MhlI	GDGCHC	1 cut(s)	966
MluCI	AATT	3 cut(s)	121, 148, 333
MlyI	GAGTC	2 cut(s)	935, 965
MroI	TCCGGA	1 cut(s)	177
MroNI	GCCGGC	1 cut(s)	717
MslI	CAYNNNNRTG	1 cut(s)	701
MspA1I	CMGCKG	1 cut(s)	494
MspI	CCGG	8 cut(s)	178, 316, 362, 416, 635, 718, 797, 1032
MspR9I	CCNGG	3 cut(s)	615, 724, 1033
MunI	CAATTG	1 cut(s)	333
MvaI	CCWGG	2 cut(s)	615, 724
MvnI	CGCG	2 cut(s)	185, 898
MwoI	GCNNNNNNNGC	9 cut(s)	14, 35, 497, 658, 734, 760, 997, 1006, 1015
NaeI	GCCGGC	1 cut(s)	719
NciI	CCSGG	1 cut(s)	1033
NdeII	GATC	6 cut(s)	191, 355, 412, 515, 537, 594
NgoMIV	GCCGGC	1 cut(s)	717
NlaIII	CATG	5 cut(s)	25, 266, 413, 767, 991
NlaIV	GGNNCC	6 cut(s)	214, 306, 612, 685, 963, 964
NmuCI	GTSAC	1 cut(s)	236
NspI	RCATGY	1 cut(s)	991
OliI	CACNNNNGTG	1 cut(s)	701
PaeI	GCATGC	1 cut(s)	991
PasI	CCCWGGG	1 cut(s)	723
PceI	AGGCCT	2 cut(s)	886, 1000
PcsI	WCGNNNNNNNCGW	1 cut(s)	895
PdiI	GCCGGC	1 cut(s)	719
PfeI	GAWTC	4 cut(s)	85, 170, 471, 643
PinAI	ACCGGT	1 cut(s)	634
PkrI	GCNGC	5 cut(s)	7, 10, 369, 493, 916
Ple19I	CGATCG	1 cut(s)	540
PleI	GAGTC	2 cut(s)	935, 964
PpsI	GAGTC	2 cut(s)	935, 964
PpuMI	RGGWCCY	1 cut(s)	610
Psp1406I	AACGTT	1 cut(s)	567
Psp5II	RGGWCCY	1 cut(s)	610
Psp6I	CCWGG	2 cut(s)	613, 722
PspEI	GGTNACC	1 cut(s)	236
PspFI	CCCAGC	1 cut(s)	500
PspGI	CCWGG	2 cut(s)	613, 722
PspN4I	GGNNCC	6 cut(s)	214, 306, 612, 685, 963, 964
PspOMI	GGGCCC	1 cut(s)	962
PspPI	GGNCC	7 cut(s)	296, 533, 610, 720, 857, 962, 963
PspPPI	RGGWCCY	1 cut(s)	610
PstI	CTGCAG	1 cut(s)	10
PsuI	RGATCY	1 cut(s)	191
PvuI	CGATCG	1 cut(s)	540
PvuII	CAGCTG	1 cut(s)	494
RsaI	GTAC	4 cut(s)	225, 639, 676, 685
RsaNI	GTAC	4 cut(s)	224, 638, 675, 684
RseI	CAYNNNNRTG	1 cut(s)	701
SatI	GCNGC	5 cut(s)	6, 9, 368, 492, 915
Sau3AI	GATC	6 cut(s)	191, 355, 412, 515, 537, 594
Sau96I	GGNCC	7 cut(s)	296, 533, 610, 720, 857, 962, 963
SchI	GAGTC	2 cut(s)	935, 965
ScrFI	CCNGG	3 cut(s)	615, 724, 1033
SduI	GDGCHC	1 cut(s)	966
SfaNI	GCATC	8 cut(s)	26, 153, 370, 487, 702, 724, 814, 926
SfcI	CTRYAG	1 cut(s)	6
SinI	GGWCC	3 cut(s)	296, 533, 610
SmiMI	CAYNNNNRTG	1 cut(s)	701
SmlI	CTYRAG	4 cut(s)	53, 384, 699, 852
SmoI	CTYRAG	4 cut(s)	53, 384, 699, 852
SphI	GCATGC	1 cut(s)	991
Sse9I	AATT	3 cut(s)	121, 148, 333
SseBI	AGGCCT	2 cut(s)	886, 1000
SsiI	CCGC	4 cut(s)	185, 506, 743, 914
SspMI	CTAG	1 cut(s)	279
StuI	AGGCCT	2 cut(s)	886, 1000
StyD4I	CCNGG	3 cut(s)	613, 722, 1031
StyI	CCWWGG	1 cut(s)	230
TaaI	ACNGT	7 cut(s)	48, 217, 242, 300, 313, 431, 934
TaiI	ACGT	2 cut(s)	459, 570
TaqI	TCGA	3 cut(s)	426, 623, 813
TaqII	GACCGA	1 cut(s)	550
TasI	AATT	3 cut(s)	121, 148, 333
TauI	GCSGC	1 cut(s)	917
TfiI	GAWTC	4 cut(s)	85, 170, 471, 643
TseFI	GTSAC	1 cut(s)	236
TseI	GCWGC	4 cut(s)	5, 8, 367, 491
Tsp45I	GTSAC	1 cut(s)	236
TspDTI	ATGAA	1 cut(s)	162
VpaK11BI	GGWCC	3 cut(s)	296, 533, 610
XapI	RAATTY	1 cut(s)	121
XceI	RCATGY	1 cut(s)	991
XcmI	CCANNNNNNNNNTGG	1 cut(s)	766
XmiI	GTMKAC	1 cut(s)	867
XspI	CTAG	1 cut(s)	279
ZraI	GACGTC	1 cut(s)	457

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.