Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0039886.1

Orthogroup ID

OG0000172

Physical Location & Seq

Genomic Coordinates Forward (+)

2749 .. 3966

Gene Structure 1218 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0039886.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1041 bp

atggcagcggctattgcttccatgacggccaggctagcgaccaaattgtcgctcagagagggtgaggaatcggttgacctgggaaaccttagggttctagggaaggagtttcttgctcgtcgtttctacttggtggggaaactcaacacttgtagggcggtgattttggattctttcaggagtgcggtgcggtcaatgtggagactaacggggactgtggaggttcaaccacgcggggatagttttctgtttacgttcactcttgaacgtgatgtcgcacgggtgaagaagggtgggccttggagttttcagagtgctatgattttgttgaatgattacgatggctttttggtgattgatgaggtacgcttggattgtcatgttagggtttcgcctaccgacgttctcagtttgaggtttcagtacgagcggcttttggggaggtgcagactatgtactttcttgaatcatggaggacagaggtgtccaagggaggatgtggtggagactgacactgtagtggacgatggatcgcagcaggctcctgggccggctctcccagggctcgtgtttaggtctaattcccagccctctttttccttgccttcgactttcaaggttcctaatttattgaagaagaaacaagtgcaaattcgtcctctcccggagctggaatcttcgcctgggactgaaggtacctctgctcttgtccctgtggttgggatgcgttgccttagggaggaggaggatgaggatgctggtgaacgagctaaacatcgtttagctctagttctgggcactctgcaaccggaaaatctagggctggaattctcctctgatggtttggtggaggtgaaggtgatgtcgcctcccaaggtgtacaagaagaagggcaggcctcgaggacatagaaacaaggttaaggcggcgatgtctgtgagtggtggttccagatccatggtctctactgaggatggtcctagcagtgtgcatggaaggcttgggggagcggcagctccgccggattctcaggctgattag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005829 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006979 GO:0008150 GO:0008152 GO:0009505 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0016020 GO:0016491 GO:0016614 GO:0016899 GO:0030054 GO:0030312 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048046 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0055114 GO:0071944 GO:0098542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BBE FAD_binding_4

Protein Analysis

346

Amino Acids

37.89

Weight (kDa)

9.13

Isoelectric Point (pI)

51.75

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000172)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G59650 AT3G59650
fragaria_vesca	FvH4_1g19981 FvH4_1g22221 FvH4_2g13530 FvH4_2g13791 FvH4_2g14332 FvH4_2g14911 FvH4_2g16332 FvH4_3g10980 FvH4_3g11141 FvH4_3g14171 FvH4_3g26311 FvH4_3g28254 FvH4_3g29741 FvH4_4g05261 FvH4_4g12002 FvH4_4g13371 FvH4_4g15541 FvH4_4g18531 FvH4_5g02661 FvH4_5g02662 FvH4_5g16791 FvH4_5g29700 FvH4_5g35881 FvH4_5g37061 FvH4_6g01571 FvH4_6g12761 FvH4_6g14961 FvH4_6g20381 FvH4_6g22001 FvH4_6g23673 FvH4_6g23960 FvH4_6g28051 FvH4_6g31094 FvH4_6g36541 FvH4_7g00911 FvH4_7g06200 FvH4_7g06200 FvH4_7g09551
malus_domestica	MD08G1230600.v1.1
prunus_persica	Prupe.1G206900_v2.0.a1 Prupe.1G206900_v2.0.a1 Prupe.1G206900_v2.0.a1
pyrus_communis	pycom08g20050 pycom15g37590
rosa_chinensis	RchiOBHm_Chr1g0333831 RchiOBHm_Chr1g0344871 RchiOBHm_Chr3g0473241 RchiOBHm_Chr5g0018871 RchiOBHm_Chr6g0265791
rosa_laevigata	RLG00000005720 RLG00000012718 RLG00000027174 RLG00000029225 RLG00000029527
rosa_multiflora	Rmu_co8002714.1_g000001 Rmu_co8072270.1_g000001 Rmu_co8095594.1_g000001 Rmu_co8308871.1_g000001 Rmu_co8398699.1_g000001 Rmu_co8404287.1_g000001 Rmu_sc0000035.1_g000010 Rmu_sc0000133.1_g000007 Rmu_sc0000253.1_g000023 Rmu_sc0000308.1_g000010 Rmu_sc0000309.1_g000030 Rmu_sc0000515.1_g000015 Rmu_sc0000865.1_g000001 Rmu_sc0000889.1_g000005 Rmu_sc0001262.1_g000011 Rmu_sc0001518.1_g000013 Rmu_sc0001533.1_g000006 Rmu_sc0001547.1_g000007 Rmu_sc0001826.1_g000013 Rmu_sc0002060.1_g000017 Rmu_sc0002129.1_g000005 Rmu_sc0002449.1_g000016 Rmu_sc0002460.1_g000036 Rmu_sc0002475.1_g000014 Rmu_sc0002553.1_g000017 Rmu_sc0002759.1_g000033 Rmu_sc0002918.1_g000009 Rmu_sc0002955.1_g000020 Rmu_sc0003094.1_g000010 Rmu_sc0003669.1_g000009 Rmu_sc0004109.1_g000008 Rmu_sc0004350.1_g000007 Rmu_sc0004542.1_g000018 Rmu_sc0004967.1_g000005 Rmu_sc0005026.1_g000005 Rmu_sc0005369.1_g000013 Rmu_sc0005400.1_g000025 Rmu_sc0005420.1_g000006 Rmu_sc0005467.1_g000013 Rmu_sc0005497.1_g000003 Rmu_sc0005607.1_g000023 Rmu_sc0005949.1_g000008 Rmu_sc0005970.1_g000002 Rmu_sc0006452.1_g000001 Rmu_sc0006720.1_g000008 Rmu_sc0006867.1_g000004 Rmu_sc0007177.1_g000006 Rmu_sc0007199.1_g000011 Rmu_sc0007783.1_g000004 Rmu_sc0007885.1_g000006 Rmu_sc0008619.1_g000001 Rmu_sc0008709.1_g000004 Rmu_sc0008709.1_g000005 Rmu_sc0009185.1_g000029 Rmu_sc0010244.1_g000010 Rmu_sc0011610.1_g000005 Rmu_sc0011680.1_g000013 Rmu_sc0012075.1_g000003 Rmu_sc0012278.1_g000001 Rmu_sc0012628.1_g000001 Rmu_sc0018485.1_g000006 Rmu_sc0019960.1_g000001 Rmu_sc0020177.1_g000002 Rmu_sc0020656.1_g000001 Rmu_sc0021333.1_g000003 Rmu_sc0023170.1_g000002 Rmu_sc0023989.1_g000005 Rmu_sc0025259.1_g000001 Rmu_sc0025350.1_g000013 Rmu_sc0029678.1_g000002 Rmu_sc0035939.1_g000001 Rmu_sc0039260.1_g000001 Rmu_sc0039886.1_g000001 Rmu_ssc0000323.1_g000030 Rmu_ssc0000333.1_g000005 Rmu_ssc0000471.1_g000017 Rmu_ssc0000480.1_g000025
rosa_roxburghii	Rroxscaffold_1G00006060 Rroxscaffold_1G00048570 Rroxscaffold_1G00057650 Rroxscaffold_1G00072720 Rroxscaffold_4G00281190 Rroxscaffold_4G00317160 Rroxscaffold_6G00411570
rosa_rugosa	Rorug01G0004800 Rorug01G0112100 Rorug01G0206100 Rorug02G0324000 Rorug05G0305600 Rorug05G0326800 Rorug06G0018900 Rorug06G0167000 Rorug07G0031200 Rorug07G0071900
rosa_samantha	Rh1AG134700 Rh1BG103000 Rh1CG007300 Rh1CG128100 Rh1DG140100 Rh2DG579500 Rh3DG199000 Rh4BG252500 Rh5AG374900 Rh5BG146800 Rh5BG151500 Rh5DG399700
rosa_wichuraiana	Rw0G001820 Rw1G011230 Rw1G011240 Rw1G027290 Rw2G011670 Rw2G039270 Rw6G018440 Rw6G023120 Rw7G025180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	46, 483
AbsI	CCTCGAGG	1 cut(s)	900
Acc65I	GGTACC	1 cut(s)	695
AccB1I	GGYRCC	1 cut(s)	695
AccBSI	CCGCTC	2 cut(s)	430, 1010
AccII	CGCG	1 cut(s)	234
AciI	CCGC	9 cut(s)	8, 158, 185, 190, 234, 430, 926, 1010, 1019
AclWI	GGATC	2 cut(s)	538, 948
AcoI	YGGCCR	1 cut(s)	27
AcsI	RAATTY	2 cut(s)	651, 827
AcuI	CTGAAG	1 cut(s)	711
AfaI	GTAC	5 cut(s)	366, 425, 457, 697, 881
AfiI	CCNNNNNNNGG	3 cut(s)	670, 719, 739
AgsI	TTSAA	6 cut(s)	227, 266, 331, 466, 616, 634
AjnI	CCWGG	5 cut(s)	29, 78, 544, 559, 682
AleI	CACNNNNGTG	1 cut(s)	518
AluBI	AGCT	4 cut(s)	670, 770, 785, 1016
AluI	AGCT	4 cut(s)	670, 770, 785, 1016
Alw26I	GTCTC	3 cut(s)	196, 500, 967
AlwI	GGATC	2 cut(s)	538, 948
Ama87I	CYCGRG	1 cut(s)	900
AoxI	GGCC	4 cut(s)	27, 296, 548, 896
ApeKI	GCWGC	3 cut(s)	5, 535, 1013
ApoI	RAATTY	2 cut(s)	651, 827
Asp718I	GGTACC	1 cut(s)	695
AspS9I	GGNCC	3 cut(s)	296, 548, 977
AsuC2I	CCSGG	1 cut(s)	665
AsuHPI	GGTGA	7 cut(s)	74, 172, 295, 364, 773, 865, 871
AsuNHI	GCTAGC	1 cut(s)	34
AvaI	CYCGRG	1 cut(s)	900
AvaII	GGWCC	1 cut(s)	977
AxyI	CCTNAGG	2 cut(s)	89, 734
BaeGI	GKGCMC	1 cut(s)	800
BanI	GGYRCC	1 cut(s)	695
BanII	GRGCYC	1 cut(s)	567
BauI	CACGAG	1 cut(s)	566
BbvI	GCAGC	3 cut(s)	17, 547, 1025
BccI	CCATC	4 cut(s)	335, 521, 833, 968
BceAI	ACGGC	1 cut(s)	42
BciT130I	CCWGG	5 cut(s)	31, 80, 546, 561, 684
BcnI	CCSGG	1 cut(s)	665
BcoDI	GTCTC	3 cut(s)	196, 500, 967
BfaI	CTAG	5 cut(s)	35, 98, 788, 818, 981
BfmI	CTRYAG	1 cut(s)	516
BisI	GCNGC	7 cut(s)	6, 9, 431, 536, 927, 1011, 1014
BlsI	GCNGC	7 cut(s)	7, 10, 432, 537, 928, 1012, 1015
Bme1390I	CCNGG	6 cut(s)	31, 80, 546, 561, 665, 684
Bme18I	GGWCC	1 cut(s)	977
BmeT110I	CYCGRG	1 cut(s)	900
BmgT120I	GGNCC	3 cut(s)	296, 548, 977
BmiI	GGNNCC	4 cut(s)	543, 621, 697, 949
BmrFI	CCNGG	6 cut(s)	31, 80, 546, 561, 665, 684
BmsI	GCATC	2 cut(s)	714, 745
BmtI	GCTAGC	1 cut(s)	38
BpuMI	CCSGG	1 cut(s)	665
BsaI	GGTCTC	1 cut(s)	967
BsaJI	CCNNGG	9 cut(s)	79, 299, 488, 545, 559, 560, 683, 873, 957
BsaWI	WCCGGW	1 cut(s)	808
Bsc4I	CCNNNNNNNGG	3 cut(s)	670, 719, 739
Bse118I	RCCGGY	1 cut(s)	550
Bse21I	CCTNAGG	2 cut(s)	89, 734
BseBI	CCWGG	5 cut(s)	31, 80, 546, 561, 684
BseDI	CCNNGG	9 cut(s)	79, 299, 488, 545, 559, 560, 683, 873, 957
BseGI	GGATG	5 cut(s)	502, 729, 754, 760, 979
BseLI	CCNNNNNNNGG	3 cut(s)	670, 719, 739
BseMII	CTCAG	3 cut(s)	67, 421, 960
BseRI	GAGGAG	3 cut(s)	755, 758, 823
BseSI	GKGCMC	1 cut(s)	800
BseXI	GCAGC	3 cut(s)	17, 547, 1025
BseYI	CCCAGC	1 cut(s)	585
BsgI	GTGCAG	1 cut(s)	466
Bsh1236I	CGCG	1 cut(s)	234
BshFI	GGCC	4 cut(s)	29, 298, 550, 898
BshNI	GGYRCC	1 cut(s)	695
BsiHKCI	CYCGRG	1 cut(s)	900
BsiSI	CCGG	4 cut(s)	551, 665, 809, 1022
BslFI	GGGAC	3 cut(s)	226, 695, 700
BslI	CCNNNNNNNGG	3 cut(s)	670, 719, 739
BsmAI	GTCTC	3 cut(s)	196, 500, 967
BsmFI	GGGAC	3 cut(s)	226, 695, 700
BsnI	GGCC	4 cut(s)	29, 298, 550, 898
Bso31I	GGTCTC	1 cut(s)	967
BsoBI	CYCGRG	1 cut(s)	900
Bsp1286I	GDGCHC	2 cut(s)	567, 800
Bsp1407I	TGTACA	1 cut(s)	879
Bsp143I	GATC	2 cut(s)	530, 953
Bsp19I	CCATGG	1 cut(s)	957
BspACI	CCGC	9 cut(s)	8, 158, 185, 190, 234, 430, 926, 1010, 1019
BspANI	GGCC	4 cut(s)	29, 298, 550, 898
BspCNI	CTCAG	3 cut(s)	66, 420, 961
BspFNI	CGCG	1 cut(s)	234
BspLI	GGNNCC	4 cut(s)	543, 621, 697, 949
BspOI	GCTAGC	1 cut(s)	38
BspPI	GGATC	2 cut(s)	538, 948
BspT107I	GGYRCC	1 cut(s)	695
BspTNI	GGTCTC	1 cut(s)	967
BsrBI	CCGCTC	2 cut(s)	430, 1010
BsrFI	RCCGGY	1 cut(s)	550
BsrGI	TGTACA	1 cut(s)	879
BssAI	RCCGGY	1 cut(s)	550
BssECI	CCNNGG	9 cut(s)	79, 299, 488, 545, 559, 560, 683, 873, 957
BssMI	GATC	2 cut(s)	530, 953
BssSI	CACGAG	1 cut(s)	566
BssT1I	CCWWGG	4 cut(s)	299, 488, 873, 957
Bst2BI	CACGAG	1 cut(s)	566
Bst2UI	CCWGG	5 cut(s)	31, 80, 546, 561, 684
Bst4CI	ACNGT	2 cut(s)	217, 517
BstAUI	TGTACA	1 cut(s)	879
BstC8I	GCNNGC	4 cut(s)	36, 540, 552, 896
BstDEI	CTNAG	6 cut(s)	53, 89, 407, 734, 969, 1029
BstDSI	CCRYGG	1 cut(s)	957
BstENI	CCTNNNNNAGG	1 cut(s)	737
BstF5I	GGATG	5 cut(s)	502, 729, 754, 760, 979
BstFNI	CGCG	1 cut(s)	234
BstKTI	GATC	2 cut(s)	533, 956
BstMAI	GTCTC	3 cut(s)	196, 500, 967
BstMBI	GATC	2 cut(s)	530, 953
BstMWI	GCNNNNNNNGC	3 cut(s)	14, 35, 997
BstNI	CCWGG	5 cut(s)	31, 80, 546, 561, 684
BstSCI	CCNGG	6 cut(s)	29, 78, 544, 559, 663, 682
BstSFI	CTRYAG	1 cut(s)	516
BstSLI	GKGCMC	1 cut(s)	800
BstUI	CGCG	1 cut(s)	234
BstV1I	GCAGC	3 cut(s)	17, 547, 1025
BstX2I	RGATCY	1 cut(s)	953
BstXI	CCANNNNNNTGG	1 cut(s)	958
BstYI	RGATCY	1 cut(s)	953
Bsu36I	CCTNAGG	2 cut(s)	89, 734
BsuRI	GGCC	4 cut(s)	29, 298, 550, 898
BtgI	CCRYGG	1 cut(s)	957
BtgZI	GCGATG	1 cut(s)	944
BtsCI	GGATG	5 cut(s)	502, 729, 754, 760, 979
BtsI	GCAGTG	1 cut(s)	991
BtsIMutI	CAGTG	2 cut(s)	513, 991
Cac8I	GCNNGC	4 cut(s)	36, 540, 552, 896
Cfr10I	RCCGGY	1 cut(s)	550
Cfr13I	GGNCC	3 cut(s)	296, 548, 977
Csp6I	GTAC	5 cut(s)	365, 424, 456, 696, 880
CviAII	CATG	5 cut(s)	22, 380, 470, 958, 992
CviQI	GTAC	5 cut(s)	365, 424, 456, 696, 880
DdeI	CTNAG	6 cut(s)	53, 89, 407, 734, 969, 1029
DpnI	GATC	2 cut(s)	532, 955
DpnII	GATC	2 cut(s)	530, 953
DrdI	GACNNNNNNGTC	2 cut(s)	46, 483
DseDI	GACNNNNNNGTC	2 cut(s)	46, 483
EaeI	YGGCCR	1 cut(s)	27
EciI	GGCGGA	1 cut(s)	1008
Eco130I	CCWWGG	4 cut(s)	299, 488, 873, 957
Eco147I	AGGCCT	1 cut(s)	898
Eco24I	GRGCYC	1 cut(s)	567
Eco31I	GGTCTC	1 cut(s)	967
Eco47I	GGWCC	1 cut(s)	977
Eco57I	CTGAAG	1 cut(s)	711
Eco81I	CCTNAGG	2 cut(s)	89, 734
Eco88I	CYCGRG	1 cut(s)	900
EcoNI	CCTNNNNNAGG	1 cut(s)	737
EcoRI	GAATTC	1 cut(s)	827
EcoRII	CCWGG	5 cut(s)	29, 78, 544, 559, 682
EcoT14I	CCWWGG	4 cut(s)	299, 488, 873, 957
EcoT38I	GRGCYC	1 cut(s)	567
ErhI	CCWWGG	4 cut(s)	299, 488, 873, 957
FaeI	CATG	5 cut(s)	25, 383, 473, 961, 995
FaiI	YATR	8 cut(s)	23, 320, 381, 454, 471, 909, 959, 993
FaqI	GGGAC	3 cut(s)	226, 695, 700
FatI	CATG	5 cut(s)	21, 379, 469, 957, 991
FauI	CCCGC	1 cut(s)	227
Fnu4HI	GCNGC	7 cut(s)	6, 9, 431, 536, 927, 1011, 1014
FokI	GGATG	5 cut(s)	509, 736, 761, 767, 986
FriOI	GRGCYC	1 cut(s)	567
Fsp4HI	GCNGC	7 cut(s)	6, 9, 431, 536, 927, 1011, 1014
FspBI	CTAG	5 cut(s)	35, 98, 788, 818, 981
GluI	GCNGC	7 cut(s)	6, 9, 431, 536, 927, 1011, 1014
GsaI	CCCAGC	1 cut(s)	589
HaeIII	GGCC	4 cut(s)	29, 298, 550, 898
HapII	CCGG	4 cut(s)	551, 665, 809, 1022
Hin1II	CATG	5 cut(s)	25, 383, 473, 961, 995
HincII	GTYRAC	1 cut(s)	76
HindII	GTYRAC	1 cut(s)	76
HinfI	GANTC	5 cut(s)	68, 170, 466, 674, 1025
HpaII	CCGG	4 cut(s)	551, 665, 809, 1022
HphI	GGTGA	7 cut(s)	74, 172, 295, 364, 773, 865, 871
Hpy166II	GTNNAC	6 cut(s)	76, 252, 258, 523, 764, 880
Hpy188I	TCNGA	3 cut(s)	56, 312, 838
Hpy188III	TCNNGA	4 cut(s)	178, 263, 463, 951
Hpy8I	GTNNAC	6 cut(s)	76, 252, 258, 523, 764, 880
Hpy99I	CGWCG	2 cut(s)	123, 404
HpyAV	CCTTC	7 cut(s)	97, 283, 615, 686, 850, 883, 990
HpyCH4III	ACNGT	2 cut(s)	217, 517
HpyCH4IV	ACGT	3 cut(s)	254, 268, 402
HpyCH4V	TGCA	4 cut(s)	447, 649, 805, 991
HpyF10VI	GCNNNNNNNGC	3 cut(s)	14, 35, 997
HpyF3I	CTNAG	6 cut(s)	53, 89, 407, 734, 969, 1029
HpySE526I	ACGT	3 cut(s)	254, 268, 402
Hsp92II	CATG	5 cut(s)	25, 383, 473, 961, 995
KpnI	GGTACC	1 cut(s)	699
KroI	GCCGGC	1 cut(s)	550
KroNI	GCCGGC	1 cut(s)	552
Kzo9I	GATC	2 cut(s)	530, 953
LmnI	GCTCC	4 cut(s)	547, 667, 1007, 1021
Lsp1109I	GCAGC	3 cut(s)	17, 547, 1025
LweI	GCATC	2 cut(s)	714, 745
MaeI	CTAG	5 cut(s)	35, 98, 788, 818, 981
MaeII	ACGT	3 cut(s)	254, 268, 402
MalI	GATC	2 cut(s)	532, 955
MbiI	CCGCTC	2 cut(s)	430, 1010
MboI	GATC	2 cut(s)	530, 953
MboII	GAAGA	5 cut(s)	298, 646, 649, 669, 898
MflI	RGATCY	1 cut(s)	953
MhlI	GDGCHC	2 cut(s)	567, 800
MluCI	AATT	5 cut(s)	44, 580, 625, 651, 827
MroNI	GCCGGC	1 cut(s)	550
MseI	TTAA	1 cut(s)	921
MslI	CAYNNNNRTG	1 cut(s)	518
MspA1I	CMGCKG	1 cut(s)	8
MspI	CCGG	4 cut(s)	551, 665, 809, 1022
MspR9I	CCNGG	6 cut(s)	31, 80, 546, 561, 665, 684
MvaI	CCWGG	5 cut(s)	31, 80, 546, 561, 684
MvnI	CGCG	1 cut(s)	234
MwoI	GCNNNNNNNGC	3 cut(s)	14, 35, 997
NaeI	GCCGGC	1 cut(s)	552
NciI	CCSGG	1 cut(s)	665
NcoI	CCATGG	1 cut(s)	957
NdeII	GATC	2 cut(s)	530, 953
NgoMIV	GCCGGC	1 cut(s)	550
NheI	GCTAGC	1 cut(s)	34
NlaIII	CATG	5 cut(s)	25, 383, 473, 961, 995
NlaIV	GGNNCC	4 cut(s)	543, 621, 697, 949
OliI	CACNNNNGTG	1 cut(s)	518
PaeR7I	CTCGAG	1 cut(s)	900
PasI	CCCWGGG	1 cut(s)	560
PceI	AGGCCT	1 cut(s)	898
PdiI	GCCGGC	1 cut(s)	552
PfeI	GAWTC	5 cut(s)	68, 170, 466, 674, 1025
PfoI	TCCNGGA	1 cut(s)	663
PkrI	GCNGC	7 cut(s)	7, 10, 432, 537, 928, 1012, 1015
Psp6I	CCWGG	5 cut(s)	29, 78, 544, 559, 682
PspFI	CCCAGC	1 cut(s)	585
PspGI	CCWGG	5 cut(s)	29, 78, 544, 559, 682
PspN4I	GGNNCC	4 cut(s)	543, 621, 697, 949
PspPI	GGNCC	3 cut(s)	296, 548, 977
PspXI	VCTCGAGB	1 cut(s)	900
PsuI	RGATCY	1 cut(s)	953
RsaI	GTAC	5 cut(s)	366, 425, 457, 697, 881
RsaNI	GTAC	5 cut(s)	365, 424, 456, 696, 880
RseI	CAYNNNNRTG	1 cut(s)	518
SaqAI	TTAA	1 cut(s)	921
SatI	GCNGC	7 cut(s)	6, 9, 431, 536, 927, 1011, 1014
Sau3AI	GATC	2 cut(s)	530, 953
Sau96I	GGNCC	3 cut(s)	296, 548, 977
ScrFI	CCNGG	6 cut(s)	31, 80, 546, 561, 665, 684
SduI	GDGCHC	2 cut(s)	567, 800
SfaNI	GCATC	2 cut(s)	714, 745
SfcI	CTRYAG	1 cut(s)	516
Sfr274I	CTCGAG	1 cut(s)	900
SinI	GGWCC	1 cut(s)	977
SlaI	CTCGAG	1 cut(s)	900
SmiMI	CAYNNNNRTG	1 cut(s)	518
SmlI	CTYRAG	1 cut(s)	900
SmoI	CTYRAG	1 cut(s)	900
Sse9I	AATT	5 cut(s)	44, 580, 625, 651, 827
SseBI	AGGCCT	1 cut(s)	898
SsiI	CCGC	9 cut(s)	8, 158, 185, 190, 234, 430, 926, 1010, 1019
SspMI	CTAG	5 cut(s)	35, 98, 788, 818, 981
StuI	AGGCCT	1 cut(s)	898
StyD4I	CCNGG	6 cut(s)	29, 78, 544, 559, 663, 682
StyI	CCWWGG	4 cut(s)	299, 488, 873, 957
TaaI	ACNGT	2 cut(s)	217, 517
TaiI	ACGT	3 cut(s)	257, 271, 405
TaqI	TCGA	2 cut(s)	608, 901
TasI	AATT	5 cut(s)	44, 580, 625, 651, 827
TatI	WGTACW	2 cut(s)	455, 879
TauI	GCSGC	4 cut(s)	11, 433, 929, 1013
TfiI	GAWTC	5 cut(s)	68, 170, 466, 674, 1025
Tru1I	TTAA	1 cut(s)	921
Tru9I	TTAA	1 cut(s)	921
TscAI	CASTG	2 cut(s)	520, 991
TseI	GCWGC	3 cut(s)	5, 535, 1013
TspRI	CASTG	2 cut(s)	520, 991
VpaK11BI	GGWCC	1 cut(s)	977
XagI	CCTNNNNNAGG	1 cut(s)	737
XapI	RAATTY	2 cut(s)	651, 827
XhoI	CTCGAG	1 cut(s)	900
XspI	CTAG	5 cut(s)	35, 98, 788, 818, 981

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.