Rmu_sc0000133.1_g000007

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000133.1
OG0000172
Physical Location & Seq
Reverse (-)
19483 .. 20700
1218 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000133.1_g000007.1.cds

Sequence Viewer

Length: 1110 bp
atggcagcggctattgcttccatgacggccaggctagcgaccaaattgtggctcagagagggtgatgaaccggttaacctggaaaaccttagggttccggggaaggagtttcttgctcgtcggttctacttggtggggaaactcaacacttgtagggcggtggttttggattctttcaggagtgcggtgcggtcaatgtggagactgacgaggactgtggaggtccaaccacgcggggatcattttctgtttacgttcactcttgaacgtgatgtcgcactggtgaaaaagggtggcccttggagttttcagcgtgctatgattttgttgactgattacgatggcttttcggtgattgatgaggtgaagtttgactttgtttggatctgggttgtgatccatggccttccaccgggtatcttgatggaacccactgtccagctggtgggaggaacgatcggggaggtattggaggtggatccatcggctatccgacgtggtgatgctcgggttcggattactttggtcatcaatgacccggtgcgcttggatcgtcgtgttagggtttcgcctaccgacgttctcactttgaggtttcagtatgagcggcttttggggaggtgcggactgtggctcgtttttagggataattcccagccctcactttccttgccttggactttcaaggttcctaatttattgaagaagaaacaagtgcatattcatcctctcccggaggtggaatcttctcctgggactaaaggtacctctgctcttgtacctatggttgggatgcgacgccctagggaggaggaggatgaggatgttggtaaacaagctaaacatagtttagctctggttcagagcactctgcaaccggaaaacctaggactggaattctcctctgatggtttggtggaggtgaaggtgacgtcgcctcccaaggtgtacaagaagaagggcaggcctcgaggacatagaaacaaggttaaggcagcgatgtctgtgagtggtggttccgggtccatggtctctactgaggatggtcctagcagtgtgcatggacggcttaagggagtgacagctccgccggattcccgggctgattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

369

Amino Acids

41.12

Weight (kDa)

9.83

Isoelectric Point (pI)

45.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000172)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G59650 AT3G59650
fragaria_vesca FvH4_1g19981 FvH4_1g22221 FvH4_2g13530 FvH4_2g13791 FvH4_2g14332 FvH4_2g14911 FvH4_2g16332 FvH4_3g10980 FvH4_3g11141 FvH4_3g14171 FvH4_3g26311 FvH4_3g28254 FvH4_3g29741 FvH4_4g05261 FvH4_4g12002 FvH4_4g13371 FvH4_4g15541 FvH4_4g18531 FvH4_5g02661 FvH4_5g02662 FvH4_5g16791 FvH4_5g29700 FvH4_5g35881 FvH4_5g37061 FvH4_6g01571 FvH4_6g12761 FvH4_6g14961 FvH4_6g20381 FvH4_6g22001 FvH4_6g23673 FvH4_6g23960 FvH4_6g28051 FvH4_6g31094 FvH4_6g36541 FvH4_7g00911 FvH4_7g06200 FvH4_7g06200 FvH4_7g09551
malus_domestica MD08G1230600.v1.1
prunus_persica Prupe.1G206900_v2.0.a1 Prupe.1G206900_v2.0.a1 Prupe.1G206900_v2.0.a1
pyrus_communis pycom08g20050 pycom15g37590
rosa_chinensis RchiOBHm_Chr1g0333831 RchiOBHm_Chr1g0344871 RchiOBHm_Chr3g0473241 RchiOBHm_Chr5g0018871 RchiOBHm_Chr6g0265791
rosa_laevigata RLG00000005720 RLG00000012718 RLG00000027174 RLG00000029225 RLG00000029527
rosa_multiflora Rmu_co8002714.1_g000001 Rmu_co8072270.1_g000001 Rmu_co8095594.1_g000001 Rmu_co8308871.1_g000001 Rmu_co8398699.1_g000001 Rmu_co8404287.1_g000001 Rmu_sc0000035.1_g000010 Rmu_sc0000133.1_g000007 Rmu_sc0000253.1_g000023 Rmu_sc0000308.1_g000010 Rmu_sc0000309.1_g000030 Rmu_sc0000515.1_g000015 Rmu_sc0000865.1_g000001 Rmu_sc0000889.1_g000005 Rmu_sc0001262.1_g000011 Rmu_sc0001518.1_g000013 Rmu_sc0001533.1_g000006 Rmu_sc0001547.1_g000007 Rmu_sc0001826.1_g000013 Rmu_sc0002060.1_g000017 Rmu_sc0002129.1_g000005 Rmu_sc0002449.1_g000016 Rmu_sc0002460.1_g000036 Rmu_sc0002475.1_g000014 Rmu_sc0002553.1_g000017 Rmu_sc0002759.1_g000033 Rmu_sc0002918.1_g000009 Rmu_sc0002955.1_g000020 Rmu_sc0003094.1_g000010 Rmu_sc0003669.1_g000009 Rmu_sc0004109.1_g000008 Rmu_sc0004350.1_g000007 Rmu_sc0004542.1_g000018 Rmu_sc0004967.1_g000005 Rmu_sc0005026.1_g000005 Rmu_sc0005369.1_g000013 Rmu_sc0005400.1_g000025 Rmu_sc0005420.1_g000006 Rmu_sc0005467.1_g000013 Rmu_sc0005497.1_g000003 Rmu_sc0005607.1_g000023 Rmu_sc0005949.1_g000008 Rmu_sc0005970.1_g000002 Rmu_sc0006452.1_g000001 Rmu_sc0006720.1_g000008 Rmu_sc0006867.1_g000004 Rmu_sc0007177.1_g000006 Rmu_sc0007199.1_g000011 Rmu_sc0007783.1_g000004 Rmu_sc0007885.1_g000006 Rmu_sc0008619.1_g000001 Rmu_sc0008709.1_g000004 Rmu_sc0008709.1_g000005 Rmu_sc0009185.1_g000029 Rmu_sc0010244.1_g000010 Rmu_sc0011610.1_g000005 Rmu_sc0011680.1_g000013 Rmu_sc0012075.1_g000003 Rmu_sc0012278.1_g000001 Rmu_sc0012628.1_g000001 Rmu_sc0018485.1_g000006 Rmu_sc0019960.1_g000001 Rmu_sc0020177.1_g000002 Rmu_sc0020656.1_g000001 Rmu_sc0021333.1_g000003 Rmu_sc0023170.1_g000002 Rmu_sc0023989.1_g000005 Rmu_sc0025259.1_g000001 Rmu_sc0025350.1_g000013 Rmu_sc0029678.1_g000002 Rmu_sc0035939.1_g000001 Rmu_sc0039260.1_g000001 Rmu_sc0039886.1_g000001 Rmu_ssc0000323.1_g000030 Rmu_ssc0000333.1_g000005 Rmu_ssc0000471.1_g000017 Rmu_ssc0000480.1_g000025
rosa_roxburghii Rroxscaffold_1G00006060 Rroxscaffold_1G00048570 Rroxscaffold_1G00057650 Rroxscaffold_1G00072720 Rroxscaffold_4G00281190 Rroxscaffold_4G00317160 Rroxscaffold_6G00411570
rosa_rugosa Rorug01G0004800 Rorug01G0112100 Rorug01G0206100 Rorug02G0324000 Rorug05G0305600 Rorug05G0326800 Rorug06G0018900 Rorug06G0167000 Rorug07G0031200 Rorug07G0071900
rosa_samantha Rh1AG134700 Rh1BG103000 Rh1CG007300 Rh1CG128100 Rh1DG140100 Rh2DG579500 Rh3DG199000 Rh4BG252500 Rh5AG374900 Rh5BG146800 Rh5BG151500 Rh5DG399700
rosa_wichuraiana Rw0G001820 Rw1G011230 Rw1G011240 Rw1G027290 Rw2G011670 Rw2G039270 Rw6G018440 Rw6G023120 Rw7G025180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 935
AbsI CCTCGAGG 1 cut(s) 969
Acc65I GGTACC 1 cut(s) 764
AccB1I GGYRCC 1 cut(s) 764
AccB7I CCANNNNNTGG 2 cut(s) 48, 445
AccBSI CCGCTC 1 cut(s) 607
AccII CGCG 1 cut(s) 234
AciI CCGC 8 cut(s) 8, 158, 185, 190, 234, 607, 624, 1088
AclWI GGATC 6 cut(s) 246, 391, 392, 473, 486, 558
AcoI YGGCCR 1 cut(s) 27
AcsI RAATTY 1 cut(s) 896
AcyI GRCGYC 2 cut(s) 799, 932
AfaI GTAC 3 cut(s) 766, 780, 950
AfiI CCNNNNNNNGG 8 cut(s) 48, 412, 445, 675, 739, 788, 808, 892
AflII CTTAAG 1 cut(s) 1070
AgeI ACCGGT 1 cut(s) 70
AgsI TTSAA 3 cut(s) 266, 685, 703
AjiI CACGTC 1 cut(s) 497
AjnI CCWGG 3 cut(s) 29, 78, 751
AloI GAACNNNNNNTCC 2 cut(s) 420, 452
AluBI AGCT 4 cut(s) 442, 839, 854, 1085
AluI AGCT 4 cut(s) 442, 839, 854, 1085
Alw21I GWGCWC 1 cut(s) 869
Alw26I GTCTC 2 cut(s) 196, 1036
AlwI GGATC 6 cut(s) 246, 391, 392, 473, 486, 558
Ama87I CYCGRG 3 cut(s) 507, 969, 1098
AoxI GGCC 4 cut(s) 27, 295, 403, 965
ApeKI GCWGC 2 cut(s) 5, 995
ApoI RAATTY 1 cut(s) 896
AsiGI ACCGGT 1 cut(s) 70
Asp718I GGTACC 1 cut(s) 764
AspA2I CCTAGG 2 cut(s) 803, 886
AspLEI GCGC 1 cut(s) 546
AspS9I GGNCC 4 cut(s) 223, 296, 1023, 1046
AsuC2I CCSGG 7 cut(s) 99, 414, 539, 734, 1021, 1099, 1100
AsuHPI GGTGA 7 cut(s) 74, 295, 364, 376, 512, 934, 940
AsuNHI GCTAGC 1 cut(s) 34
AvaI CYCGRG 3 cut(s) 507, 969, 1098
AvaII GGWCC 3 cut(s) 223, 1023, 1046
AvrII CCTAGG 2 cut(s) 803, 886
AxyI CCTNAGG 1 cut(s) 89
BamHI GGATCC 1 cut(s) 478
BanI GGYRCC 1 cut(s) 764
Bbv12I GWGCWC 1 cut(s) 869
BbvI GCAGC 2 cut(s) 17, 1007
BccI CCATC 5 cut(s) 335, 418, 490, 902, 1037
BceAI ACGGC 2 cut(s) 42, 1082
BciT130I CCWGG 3 cut(s) 31, 80, 753
BcnI CCSGG 7 cut(s) 99, 414, 539, 734, 1021, 1099, 1100
BcoDI GTCTC 2 cut(s) 196, 1036
BfaI CTAG 4 cut(s) 35, 804, 887, 1050
BfrI CTTAAG 1 cut(s) 1070
BisI GCNGC 4 cut(s) 6, 9, 608, 996
BlnI CCTAGG 2 cut(s) 803, 886
BlsI GCNGC 4 cut(s) 7, 10, 609, 997
Bme18I GGWCC 3 cut(s) 223, 1023, 1046
BmeT110I CYCGRG 3 cut(s) 507, 969, 1098
BmgBI CACGTC 1 cut(s) 497
BmgT120I GGNCC 4 cut(s) 223, 296, 1023, 1046
BmiI GGNNCC 7 cut(s) 96, 429, 480, 690, 766, 1018, 1024
BmsI GCATC 2 cut(s) 493, 783
BmtI GCTAGC 1 cut(s) 38
BpuMI CCSGG 7 cut(s) 99, 414, 539, 734, 1021, 1099, 1100
BsaHI GRCGYC 2 cut(s) 799, 932
BsaI GGTCTC 1 cut(s) 1036
BsaWI WCCGGW 2 cut(s) 70, 877
BsaXI ACNNNNNCTCC 2 cut(s) 922, 952
Bsc4I CCNNNNNNNGG 8 cut(s) 48, 412, 445, 675, 739, 788, 808, 892
Bse118I RCCGGY 1 cut(s) 70
Bse1I ACTGG 2 cut(s) 285, 897
Bse21I CCTNAGG 1 cut(s) 89
BseBI CCWGG 3 cut(s) 31, 80, 753
BseGI GGATG 5 cut(s) 724, 798, 823, 829, 1048
BseLI CCNNNNNNNGG 8 cut(s) 48, 412, 445, 675, 739, 788, 808, 892
BseMII CTCAG 2 cut(s) 67, 1029
BseNI ACTGG 2 cut(s) 285, 897
BseRI GAGGAG 3 cut(s) 824, 827, 892
BseXI GCAGC 2 cut(s) 17, 1007
BseYI CCCAGC 1 cut(s) 654
Bsh1236I CGCG 1 cut(s) 234
Bsh1285I CGRYCG 1 cut(s) 459
BshFI GGCC 4 cut(s) 29, 297, 405, 967
BshNI GGYRCC 1 cut(s) 764
BshTI ACCGGT 1 cut(s) 70
BsiEI CGRYCG 1 cut(s) 459
BsiHKAI GWGCWC 1 cut(s) 869
BsiHKCI CYCGRG 3 cut(s) 507, 969, 1098
BsiSI CCGG 9 cut(s) 71, 98, 413, 539, 734, 878, 1020, 1091, 1099
BslFI GGGAC 1 cut(s) 769
BslI CCNNNNNNNGG 8 cut(s) 48, 412, 445, 675, 739, 788, 808, 892
BsmAI GTCTC 2 cut(s) 196, 1036
BsmFI GGGAC 1 cut(s) 769
BsnI GGCC 4 cut(s) 29, 297, 405, 967
Bso31I GGTCTC 1 cut(s) 1036
BsoBI CYCGRG 3 cut(s) 507, 969, 1098
Bsp1286I GDGCHC 1 cut(s) 869
Bsp1407I TGTACA 1 cut(s) 948
Bsp143I GATC 6 cut(s) 238, 384, 396, 456, 478, 550
Bsp19I CCATGG 2 cut(s) 400, 1026
BspACI CCGC 8 cut(s) 8, 158, 185, 190, 234, 607, 624, 1088
BspANI GGCC 4 cut(s) 29, 297, 405, 967
BspCNI CTCAG 2 cut(s) 66, 1030
BspFNI CGCG 1 cut(s) 234
BspLI GGNNCC 7 cut(s) 96, 429, 480, 690, 766, 1018, 1024
BspOI GCTAGC 1 cut(s) 38
BspPI GGATC 6 cut(s) 246, 391, 392, 473, 486, 558
BspT107I GGYRCC 1 cut(s) 764
BspTI CTTAAG 1 cut(s) 1070
BspTNI GGTCTC 1 cut(s) 1036
BsrBI CCGCTC 1 cut(s) 607
BsrFI RCCGGY 1 cut(s) 70
BsrGI TGTACA 1 cut(s) 948
BsrI ACTGG 2 cut(s) 285, 897
BssAI RCCGGY 1 cut(s) 70
BssMI GATC 6 cut(s) 238, 384, 396, 456, 478, 550
BssNI GRCGYC 2 cut(s) 799, 932
BssT1I CCWWGG 7 cut(s) 299, 400, 674, 803, 886, 942, 1026
Bst2UI CCWGG 3 cut(s) 31, 80, 753
Bst4CI ACNGT 3 cut(s) 217, 436, 630
BstACI GRCGYC 2 cut(s) 799, 932
BstAFI CTTAAG 1 cut(s) 1070
BstAUI TGTACA 1 cut(s) 948
BstC8I GCNNGC 3 cut(s) 36, 315, 965
BstDEI CTNAG 3 cut(s) 53, 89, 1038
BstDSI CCRYGG 2 cut(s) 400, 1026
BstF5I GGATG 5 cut(s) 724, 798, 823, 829, 1048
BstFNI CGCG 1 cut(s) 234
BstHHI GCGC 1 cut(s) 546
BstKTI GATC 6 cut(s) 241, 387, 399, 459, 481, 553
BstMAI GTCTC 2 cut(s) 196, 1036
BstMBI GATC 6 cut(s) 238, 384, 396, 456, 478, 550
BstMCI CGRYCG 1 cut(s) 459
BstMWI GCNNNNNNNGC 3 cut(s) 14, 35, 1066
BstNI CCWGG 3 cut(s) 31, 80, 753
BstUI CGCG 1 cut(s) 234
BstV1I GCAGC 2 cut(s) 17, 1007
BstX2I RGATCY 2 cut(s) 384, 478
BstYI RGATCY 2 cut(s) 384, 478
Bsu36I CCTNAGG 1 cut(s) 89
BsuRI GGCC 4 cut(s) 29, 297, 405, 967
BtgI CCRYGG 2 cut(s) 400, 1026
BtgZI GCGATG 1 cut(s) 1013
BtrI CACGTC 1 cut(s) 497
BtsCI GGATG 5 cut(s) 724, 798, 823, 829, 1048
BtsI GCAGTG 1 cut(s) 1060
BtsIMutI CAGTG 3 cut(s) 278, 432, 1060
Cac8I GCNNGC 3 cut(s) 36, 315, 965
CfoI GCGC 1 cut(s) 546
Cfr10I RCCGGY 1 cut(s) 70
Cfr13I GGNCC 4 cut(s) 223, 296, 1023, 1046
Cfr9I CCCGGG 1 cut(s) 1098
CseI GACGC 1 cut(s) 807
Csp6I GTAC 3 cut(s) 765, 779, 949
CspAI ACCGGT 1 cut(s) 70
CviAII CATG 4 cut(s) 22, 401, 1027, 1061
CviQI GTAC 3 cut(s) 765, 779, 949
DdeI CTNAG 3 cut(s) 53, 89, 1038
DpnI GATC 6 cut(s) 240, 386, 398, 458, 480, 552
DpnII GATC 6 cut(s) 238, 384, 396, 456, 478, 550
EaeI YGGCCR 1 cut(s) 27
EciI GGCGGA 1 cut(s) 1077
Eco130I CCWWGG 7 cut(s) 299, 400, 674, 803, 886, 942, 1026
Eco147I AGGCCT 1 cut(s) 967
Eco31I GGTCTC 1 cut(s) 1036
Eco47I GGWCC 3 cut(s) 223, 1023, 1046
Eco81I CCTNAGG 1 cut(s) 89
Eco88I CYCGRG 3 cut(s) 507, 969, 1098
EcoRI GAATTC 1 cut(s) 896
EcoRII CCWGG 3 cut(s) 29, 78, 751
EcoT14I CCWWGG 7 cut(s) 299, 400, 674, 803, 886, 942, 1026
ErhI CCWWGG 7 cut(s) 299, 400, 674, 803, 886, 942, 1026
FaeI CATG 4 cut(s) 25, 404, 1030, 1064
FalI AAGNNNNNCTT 2 cut(s) 359, 391
FaqI GGGAC 1 cut(s) 769
FatI CATG 4 cut(s) 21, 400, 1026, 1060
FauI CCCGC 1 cut(s) 227
Fnu4HI GCNGC 4 cut(s) 6, 9, 608, 996
FokI GGATG 5 cut(s) 711, 805, 830, 836, 1055
Fsp4HI GCNGC 4 cut(s) 6, 9, 608, 996
FspBI CTAG 4 cut(s) 35, 804, 887, 1050
GlaI GCGC 1 cut(s) 545
GluI GCNGC 4 cut(s) 6, 9, 608, 996
GsaI CCCAGC 1 cut(s) 658
HaeIII GGCC 4 cut(s) 29, 297, 405, 967
HapII CCGG 9 cut(s) 71, 98, 413, 539, 734, 878, 1020, 1091, 1099
HgaI GACGC 1 cut(s) 807
HhaI GCGC 1 cut(s) 546
Hin1I GRCGYC 2 cut(s) 799, 932
Hin1II CATG 4 cut(s) 25, 404, 1030, 1064
Hin6I GCGC 1 cut(s) 544
HinP1I GCGC 1 cut(s) 544
HincII GTYRAC 2 cut(s) 76, 330
HindII GTYRAC 2 cut(s) 76, 330
HinfI GANTC 3 cut(s) 170, 743, 1094
HpaI GTTAAC 1 cut(s) 76
HpaII CCGG 9 cut(s) 71, 98, 413, 539, 734, 878, 1020, 1091, 1099
HphI GGTGA 7 cut(s) 74, 295, 364, 376, 512, 934, 940
Hpy166II GTNNAC 6 cut(s) 76, 252, 258, 330, 833, 949
Hpy188I TCNGA 5 cut(s) 56, 494, 516, 864, 907
Hpy188III TCNNGA 3 cut(s) 178, 263, 421
Hpy8I GTNNAC 6 cut(s) 76, 252, 258, 330, 833, 949
Hpy99I CGWCG 6 cut(s) 123, 498, 558, 581, 801, 937
HpyAV CCTTC 4 cut(s) 97, 416, 919, 952
HpyCH4III ACNGT 3 cut(s) 217, 436, 630
HpyCH4IV ACGT 5 cut(s) 254, 268, 496, 579, 932
HpyCH4V TGCA 3 cut(s) 718, 874, 1060
HpyF10VI GCNNNNNNNGC 3 cut(s) 14, 35, 1066
HpyF3I CTNAG 3 cut(s) 53, 89, 1038
HpySE526I ACGT 5 cut(s) 254, 268, 496, 579, 932
Hsp92I GRCGYC 2 cut(s) 799, 932
Hsp92II CATG 4 cut(s) 25, 404, 1030, 1064
HspAI GCGC 1 cut(s) 544
KpnI GGTACC 1 cut(s) 768
KspAI GTTAAC 1 cut(s) 76
Kzo9I GATC 6 cut(s) 238, 384, 396, 456, 478, 550
LmnI GCTCC 1 cut(s) 1090
Lsp1109I GCAGC 2 cut(s) 17, 1007
LweI GCATC 2 cut(s) 493, 783
MaeI CTAG 4 cut(s) 35, 804, 887, 1050
MaeII ACGT 5 cut(s) 254, 268, 496, 579, 932
MaeIII GTNAC 2 cut(s) 928, 1078
MalI GATC 6 cut(s) 240, 386, 398, 458, 480, 552
MbiI CCGCTC 1 cut(s) 607
MboI GATC 6 cut(s) 238, 384, 396, 456, 478, 550
MboII GAAGA 4 cut(s) 715, 718, 738, 967
MflI RGATCY 2 cut(s) 384, 478
MhlI GDGCHC 1 cut(s) 869
MluCI AATT 4 cut(s) 44, 649, 694, 896
MmeI TCCRAC 2 cut(s) 250, 517
MseI TTAA 3 cut(s) 75, 990, 1071
MspA1I CMGCKG 2 cut(s) 8, 442
MspCI CTTAAG 1 cut(s) 1070
MspI CCGG 9 cut(s) 71, 98, 413, 539, 734, 878, 1020, 1091, 1099
MvaI CCWGG 3 cut(s) 31, 80, 753
MvnI CGCG 1 cut(s) 234
MwoI GCNNNNNNNGC 3 cut(s) 14, 35, 1066
NciI CCSGG 7 cut(s) 99, 414, 539, 734, 1021, 1099, 1100
NcoI CCATGG 2 cut(s) 400, 1026
NdeII GATC 6 cut(s) 238, 384, 396, 456, 478, 550
NheI GCTAGC 1 cut(s) 34
NlaIII CATG 4 cut(s) 25, 404, 1030, 1064
NlaIV GGNNCC 7 cut(s) 96, 429, 480, 690, 766, 1018, 1024
NmuCI GTSAC 2 cut(s) 928, 1078
PaeR7I CTCGAG 1 cut(s) 969
PceI AGGCCT 1 cut(s) 967
PfeI GAWTC 3 cut(s) 170, 743, 1094
PflMI CCANNNNNTGG 2 cut(s) 48, 445
PfoI TCCNGGA 1 cut(s) 732
PinAI ACCGGT 1 cut(s) 70
PkrI GCNGC 4 cut(s) 7, 10, 609, 997
Ple19I CGATCG 1 cut(s) 459
Psp6I CCWGG 3 cut(s) 29, 78, 751
PspFI CCCAGC 1 cut(s) 654
PspGI CCWGG 3 cut(s) 29, 78, 751
PspN4I GGNNCC 7 cut(s) 96, 429, 480, 690, 766, 1018, 1024
PspPI GGNCC 4 cut(s) 223, 296, 1023, 1046
PspXI VCTCGAGB 1 cut(s) 969
PsuI RGATCY 2 cut(s) 384, 478
PvuI CGATCG 1 cut(s) 459
PvuII CAGCTG 1 cut(s) 442
RsaI GTAC 3 cut(s) 766, 780, 950
RsaNI GTAC 3 cut(s) 765, 779, 949
SaqAI TTAA 3 cut(s) 75, 990, 1071
SatI GCNGC 4 cut(s) 6, 9, 608, 996
Sau3AI GATC 6 cut(s) 238, 384, 396, 456, 478, 550
Sau96I GGNCC 4 cut(s) 223, 296, 1023, 1046
SduI GDGCHC 1 cut(s) 869
SfaNI GCATC 2 cut(s) 493, 783
Sfr274I CTCGAG 1 cut(s) 969
SinI GGWCC 3 cut(s) 223, 1023, 1046
SlaI CTCGAG 1 cut(s) 969
SmaI CCCGGG 1 cut(s) 1100
SmlI CTYRAG 2 cut(s) 969, 1070
SmoI CTYRAG 2 cut(s) 969, 1070
Sse9I AATT 4 cut(s) 44, 649, 694, 896
SseBI AGGCCT 1 cut(s) 967
SsiI CCGC 8 cut(s) 8, 158, 185, 190, 234, 607, 624, 1088
SspMI CTAG 4 cut(s) 35, 804, 887, 1050
StuI AGGCCT 1 cut(s) 967
StyI CCWWGG 7 cut(s) 299, 400, 674, 803, 886, 942, 1026
TaaI ACNGT 3 cut(s) 217, 436, 630
TaiI ACGT 5 cut(s) 257, 271, 499, 582, 935
TaqI TCGA 1 cut(s) 970
TasI AATT 4 cut(s) 44, 649, 694, 896
TatI WGTACW 1 cut(s) 948
TauI GCSGC 2 cut(s) 11, 610
TfiI GAWTC 3 cut(s) 170, 743, 1094
Tru1I TTAA 3 cut(s) 75, 990, 1071
Tru9I TTAA 3 cut(s) 75, 990, 1071
TscAI CASTG 3 cut(s) 285, 439, 1060
TseFI GTSAC 2 cut(s) 928, 1078
TseI GCWGC 2 cut(s) 5, 995
Tsp45I GTSAC 2 cut(s) 928, 1078
TspDTI ATGAA 2 cut(s) 81, 713
TspMI CCCGGG 1 cut(s) 1098
TspRI CASTG 3 cut(s) 285, 439, 1060
Van91I CCANNNNNTGG 2 cut(s) 48, 445
Vha464I CTTAAG 1 cut(s) 1070
VpaK11BI GGWCC 3 cut(s) 223, 1023, 1046
XapI RAATTY 1 cut(s) 896
XcmI CCANNNNNNNNNTGG 1 cut(s) 439
XhoI CTCGAG 1 cut(s) 969
XmaI CCCGGG 1 cut(s) 1098
XmaJI CCTAGG 2 cut(s) 803, 886
XspI CTAG 4 cut(s) 35, 804, 887, 1050
ZraI GACGTC 1 cut(s) 933
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.