Rorug05G0326800

Belongs to the oxygen-dependent FAD-linked oxidoreductase family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
39290132 .. 39293466
3335 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0326800.1

Sequence Viewer

Length: 1800 bp
ATGGCTACTGGTAATGGAGATCCAATGGCAAGTGCACATACTGCCATCAACATTCACTCGATACATTCGCATCGTTTTCTAGAAAACAACAATAGAGAGCTATACCTTAATACATGTGTGCCACTCTCTAAGTATGCACTAAAAGGCAATTGGGAAGCTGCTGAACGAATCTTGAAGGAGGATCCGAGTCTTTTGACTTCTAGCATAACAAGAGGGGAGGACACTGTCCTTCACATTGCAGCAGGAGCAAGACATGTTCGCTTTGTGGAGAAGCTGGTCGAAATGATGGAAGAACTGAATGGAAACGATACATGTTCACAAAACTTGGCACTGAAAGACATGAATGGAAACACTGCCTTCAGCATTGCAGCTGCAGCTGGAAGTATTGAAATTGCAGAGATTTTGATCAAGAAGAATAAGGATTTGCCAATAATTCGAGGTGGTGAAGGAATGACACCACTCTATATGGCTGCCTTGTTGGGACAGTCTGTAATGGCAGATAACCTGTACTCTGGAACCAAGGAAATGTTGGAGGAATTCGACCGCCAAGCGTTGTTTTTTACTTGTATCGATAATGGTCTGTACGATCTAGCTTTGAAGATTCTAAGAAGTGACAGAGCATTAGCTAAGGCTTGTAATGCAAAAGAGGAAACAGCTTTGCATATCTTGGCTAGAACGCCTTCAGACTTCACCAGCCAAAGTCCAGGAACGTGGAGTAGACTCATCAACTCATTTATCCCAGATTGGAATTTCTCATACAATAGAAACTTGAAACAAGTCAATGAAGCCCTTCAACTAGTCCAATGCCTTTGGACAGAAATCTTGAGAAATGATCATGACGATGTGATGAGACTAATCAAACATCCTTCAAGATTACTGTTCGACGCTACAAAATTAGGAAATTATGAGTTCCTGGCAGTGCTCATTAACTCTTATCCTGACTTAATATGGGAACTTGATGACAAAAATCGGAGTATAATCCATGTTGCTGTTTTGCATCGTCATGCAAGTATCTTCAATTTAGTGCATGAGATAGGTTCCATCAAGGATATCATAGTGACATTTACTGATGATGAAGAGAGTAATAACATTTTACATATGGCTGCAAAATTAGCACCTCCAAATCAACTCAACCTTGTATCAGGAGCAGCTCTTCAAATGCAGCGAGAGTTGGTATGGTTTGAGGAAGTGAAAAAGATTGTACAACCTAACTCCATAGAGATGAAAAACAAGAAAGGAAAAACACCACGAGAATTGTTCACAAGTGAGCATGAAGGGTTGTTACACAAAGGAGAAGCATGGATGAAGGACACTGCAAGTTCATGCATGATTGTTGCGGCTCTTATCGCAGCTGTTGTGTTTTCAGCTGCATTTAGCGTACCTGGTGGTACATCTGATAATACAGGACAGCCAAACTTTCTAAAAGAGACTGCTTTCCTATTCTTTGCCATAGCAGATGGAGTAGCACTCGTTTCCTCTTCAACTTCAATACTGATGTTCTTGTTCATCCTCACATCGCGTTACGCTGAAGGTGATTTCCTCAAATCGTTACCGTTGAAGTTGATGATAGGACTCGCATCACTTTTCATATCTATAGCATCCATGATGGTAGCTTTTAGCGCAACCTTCTATTTAGACTGTCACTATGGATTAGGATGGGTCCCAAATCTTATATTTGTATTTGCATTTGTCCCGGTTGCTTTGTTTGCTTTTCTGCAGTTTCCTCTCTTGTCTGATATGTTTTCTTCAACATATTGTTCAAGTCTTTTATTTCAGCCATGGAAACATATGATCGAGTGA

Protein Analysis

599

Amino Acids

66.79

Weight (kDa)

5.73

Isoelectric Point (pI)

38.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 46 - 141 2.5e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 101 - 170 1e-06 Ankyrin repeats (3 copies)
PGG PF13962 433 - 545 7.4e-25 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000172)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G59650 AT3G59650
fragaria_vesca FvH4_1g19981 FvH4_1g22221 FvH4_2g13530 FvH4_2g13791 FvH4_2g14332 FvH4_2g14911 FvH4_2g16332 FvH4_3g10980 FvH4_3g11141 FvH4_3g14171 FvH4_3g26311 FvH4_3g28254 FvH4_3g29741 FvH4_4g05261 FvH4_4g12002 FvH4_4g13371 FvH4_4g15541 FvH4_4g18531 FvH4_5g02661 FvH4_5g02662 FvH4_5g16791 FvH4_5g29700 FvH4_5g35881 FvH4_5g37061 FvH4_6g01571 FvH4_6g12761 FvH4_6g14961 FvH4_6g20381 FvH4_6g22001 FvH4_6g23673 FvH4_6g23960 FvH4_6g28051 FvH4_6g31094 FvH4_6g36541 FvH4_7g00911 FvH4_7g06200 FvH4_7g06200 FvH4_7g09551
malus_domestica MD08G1230600.v1.1
prunus_persica Prupe.1G206900_v2.0.a1 Prupe.1G206900_v2.0.a1 Prupe.1G206900_v2.0.a1
pyrus_communis pycom08g20050 pycom15g37590
rosa_chinensis RchiOBHm_Chr1g0333831 RchiOBHm_Chr1g0344871 RchiOBHm_Chr3g0473241 RchiOBHm_Chr5g0018871 RchiOBHm_Chr6g0265791
rosa_laevigata RLG00000005720 RLG00000012718 RLG00000027174 RLG00000029225 RLG00000029527
rosa_multiflora Rmu_co8002714.1_g000001 Rmu_co8072270.1_g000001 Rmu_co8095594.1_g000001 Rmu_co8308871.1_g000001 Rmu_co8398699.1_g000001 Rmu_co8404287.1_g000001 Rmu_sc0000035.1_g000010 Rmu_sc0000133.1_g000007 Rmu_sc0000253.1_g000023 Rmu_sc0000308.1_g000010 Rmu_sc0000309.1_g000030 Rmu_sc0000515.1_g000015 Rmu_sc0000865.1_g000001 Rmu_sc0000889.1_g000005 Rmu_sc0001262.1_g000011 Rmu_sc0001518.1_g000013 Rmu_sc0001533.1_g000006 Rmu_sc0001547.1_g000007 Rmu_sc0001826.1_g000013 Rmu_sc0002060.1_g000017 Rmu_sc0002129.1_g000005 Rmu_sc0002449.1_g000016 Rmu_sc0002460.1_g000036 Rmu_sc0002475.1_g000014 Rmu_sc0002553.1_g000017 Rmu_sc0002759.1_g000033 Rmu_sc0002918.1_g000009 Rmu_sc0002955.1_g000020 Rmu_sc0003094.1_g000010 Rmu_sc0003669.1_g000009 Rmu_sc0004109.1_g000008 Rmu_sc0004350.1_g000007 Rmu_sc0004542.1_g000018 Rmu_sc0004967.1_g000005 Rmu_sc0005026.1_g000005 Rmu_sc0005369.1_g000013 Rmu_sc0005400.1_g000025 Rmu_sc0005420.1_g000006 Rmu_sc0005467.1_g000013 Rmu_sc0005497.1_g000003 Rmu_sc0005607.1_g000023 Rmu_sc0005949.1_g000008 Rmu_sc0005970.1_g000002 Rmu_sc0006452.1_g000001 Rmu_sc0006720.1_g000008 Rmu_sc0006867.1_g000004 Rmu_sc0007177.1_g000006 Rmu_sc0007199.1_g000011 Rmu_sc0007783.1_g000004 Rmu_sc0007885.1_g000006 Rmu_sc0008619.1_g000001 Rmu_sc0008709.1_g000004 Rmu_sc0008709.1_g000005 Rmu_sc0009185.1_g000029 Rmu_sc0010244.1_g000010 Rmu_sc0011610.1_g000005 Rmu_sc0011680.1_g000013 Rmu_sc0012075.1_g000003 Rmu_sc0012278.1_g000001 Rmu_sc0012628.1_g000001 Rmu_sc0018485.1_g000006 Rmu_sc0019960.1_g000001 Rmu_sc0020177.1_g000002 Rmu_sc0020656.1_g000001 Rmu_sc0021333.1_g000003 Rmu_sc0023170.1_g000002 Rmu_sc0023989.1_g000005 Rmu_sc0025259.1_g000001 Rmu_sc0025350.1_g000013 Rmu_sc0029678.1_g000002 Rmu_sc0035939.1_g000001 Rmu_sc0039260.1_g000001 Rmu_sc0039886.1_g000001 Rmu_ssc0000323.1_g000030 Rmu_ssc0000333.1_g000005 Rmu_ssc0000471.1_g000017 Rmu_ssc0000480.1_g000025
rosa_roxburghii Rroxscaffold_1G00006060 Rroxscaffold_1G00048570 Rroxscaffold_1G00057650 Rroxscaffold_1G00072720 Rroxscaffold_4G00281190 Rroxscaffold_4G00317160 Rroxscaffold_6G00411570
rosa_rugosa Rorug01G0004800 Rorug01G0112100 Rorug01G0206100 Rorug02G0324000 Rorug05G0305600 Rorug05G0326800 Rorug06G0018900 Rorug06G0167000 Rorug07G0031200 Rorug07G0071900
rosa_samantha Rh1AG134700 Rh1BG103000 Rh1CG007300 Rh1CG128100 Rh1DG140100 Rh2DG579500 Rh3DG199000 Rh4BG252500 Rh5AG374900 Rh5BG146800 Rh5BG151500 Rh5DG399700
rosa_wichuraiana Rw0G001820 Rw1G011230 Rw1G011240 Rw1G027290 Rw2G011670 Rw2G039270 Rw6G018440 Rw6G023120 Rw7G025180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 718
AccII CGCG 1 cut(s) 1519
AciI CCGC 2 cut(s) 544, 1337
AclWI GGATC 3 cut(s) 14, 176, 189
AcsI RAATTY 2 cut(s) 536, 748
AcuI CTGAAG 3 cut(s) 343, 666, 1548
AfaI GTAC 5 cut(s) 509, 584, 1203, 1380, 1390
AflIII ACRYGT 3 cut(s) 113, 253, 311
AhlI ACTAGT 1 cut(s) 796
AjnI CCWGG 3 cut(s) 703, 912, 1381
Alw21I GWGCWC 2 cut(s) 37, 924
Alw26I GTCTC 2 cut(s) 844, 1421
Alw44I GTGCAC 1 cut(s) 33
AlwI GGATC 3 cut(s) 14, 176, 189
ApaLI GTGCAC 1 cut(s) 33
ApoI RAATTY 2 cut(s) 536, 748
Asp700I GAANNNNTTC 2 cut(s) 679, 789
AspLEI GCGC 1 cut(s) 1622
AspS9I GGNCC 1 cut(s) 1660
AsuC2I CCSGG 1 cut(s) 1694
AsuHPI GGTGA 3 cut(s) 455, 682, 1544
AvaII GGWCC 1 cut(s) 1660
BaeGI GKGCMC 1 cut(s) 37
BamHI GGATCC 1 cut(s) 181
BarI GAAGNNNNNNTAC 2 cut(s) 1266, 1298
BauI CACGAG 1 cut(s) 1248
Bbv12I GWGCWC 2 cut(s) 37, 924
BccI CCATC 6 cut(s) 53, 280, 1049, 1451, 1600, 1650
BciT130I CCWGG 3 cut(s) 705, 914, 1383
BclI TGATCA 2 cut(s) 405, 832
BcnI CCSGG 1 cut(s) 1694
BcoDI GTCTC 2 cut(s) 844, 1421
BcuI ACTAGT 1 cut(s) 796
BfaI CTAG 5 cut(s) 80, 201, 590, 672, 797
BfmI CTRYAG 3 cut(s) 372, 1593, 1715
Bme1390I CCNGG 4 cut(s) 705, 914, 1383, 1694
Bme18I GGWCC 1 cut(s) 1660
BmgT120I GGNCC 1 cut(s) 1660
BmiI GGNNCC 5 cut(s) 183, 517, 1039, 1661, 1662
BmrFI CCNGG 4 cut(s) 705, 914, 1383, 1694
BmsI GCATC 4 cut(s) 79, 1006, 1586, 1607
BplI GAGNNNNNCTC 2 cut(s) 1452, 1484
Bpu10I CCTNAGC 1 cut(s) 627
BpuEI CTTGAG 1 cut(s) 844
BpuMI CCSGG 1 cut(s) 1694
Bsa29I ATCGAT 1 cut(s) 570
BsaBI GATNNNNATC 1 cut(s) 404
BsaJI CCNNGG 2 cut(s) 519, 1778
Bse1I ACTGG 1 cut(s) 13
Bse3DI GCAATG 2 cut(s) 234, 363
Bse8I GATNNNNATC 1 cut(s) 404
BseBI CCWGG 3 cut(s) 705, 914, 1383
BseCI ATCGAT 1 cut(s) 570
BseDI CCNNGG 2 cut(s) 519, 1778
BseGI GGATG 5 cut(s) 862, 1308, 1506, 1598, 1661
BseJI GATNNNNATC 1 cut(s) 404
BseMI GCAATG 2 cut(s) 234, 363
BseNI ACTGG 1 cut(s) 13
BseSI GKGCMC 1 cut(s) 37
Bsh1236I CGCG 1 cut(s) 1519
Bsh1285I CGRYCG 1 cut(s) 544
BshVI ATCGAT 1 cut(s) 570
BsiEI CGRYCG 1 cut(s) 544
BsiHKAI GWGCWC 2 cut(s) 37, 924
BsiSI CCGG 1 cut(s) 1694
BslFI GGGAC 3 cut(s) 495, 1646, 1676
BsmAI GTCTC 2 cut(s) 844, 1421
BsmFI GGGAC 3 cut(s) 495, 1646, 1676
Bsp1286I GDGCHC 2 cut(s) 37, 924
Bsp1407I TGTACA 1 cut(s) 1201
Bsp143I GATC 6 cut(s) 19, 181, 405, 586, 832, 1791
Bsp19I CCATGG 1 cut(s) 1778
BspACI CCGC 2 cut(s) 544, 1337
BspDI ATCGAT 1 cut(s) 570
BspFNI CGCG 1 cut(s) 1519
BspHI TCATGA 1 cut(s) 835
BspLI GGNNCC 5 cut(s) 183, 517, 1039, 1661, 1662
BspMAI CTGCAG 2 cut(s) 376, 1719
BspPI GGATC 3 cut(s) 14, 176, 189
BspQI GCTCTTC 1 cut(s) 1158
BsrDI GCAATG 2 cut(s) 234, 363
BsrGI TGTACA 1 cut(s) 1201
BsrI ACTGG 1 cut(s) 13
BssECI CCNNGG 2 cut(s) 519, 1778
BssMI GATC 6 cut(s) 19, 181, 405, 586, 832, 1791
BssSI CACGAG 1 cut(s) 1248
BssT1I CCWWGG 2 cut(s) 519, 1778
Bst2BI CACGAG 1 cut(s) 1248
Bst2UI CCWGG 3 cut(s) 705, 914, 1383
Bst4CI ACNGT 5 cut(s) 226, 486, 879, 1554, 1640
Bst6I CTCTTC 3 cut(s) 1071, 1158, 1483
BstAPI GCANNNNNTGC 1 cut(s) 41
BstAUI TGTACA 1 cut(s) 1201
BstDEI CTNAG 3 cut(s) 129, 605, 627
BstDSI CCRYGG 1 cut(s) 1778
BstF5I GGATG 5 cut(s) 862, 1308, 1506, 1598, 1661
BstFNI CGCG 1 cut(s) 1519
BstHHI GCGC 1 cut(s) 1622
BstKTI GATC 6 cut(s) 22, 184, 408, 589, 835, 1794
BstMAI GTCTC 2 cut(s) 844, 1421
BstMBI GATC 6 cut(s) 19, 181, 405, 586, 832, 1791
BstMCI CGRYCG 1 cut(s) 544
BstMWI GCNNNNNNNGC 8 cut(s) 41, 245, 374, 638, 1112, 1346, 1619, 1706
BstNI CCWGG 3 cut(s) 705, 914, 1383
BstNSI RCATGY 3 cut(s) 117, 257, 315
BstSCI CCNGG 4 cut(s) 703, 912, 1381, 1692
BstSFI CTRYAG 3 cut(s) 372, 1593, 1715
BstSLI GKGCMC 1 cut(s) 37
BstUI CGCG 1 cut(s) 1519
BstX2I RGATCY 2 cut(s) 19, 181
BstXI CCANNNNNNTGG 1 cut(s) 711
BstYI RGATCY 2 cut(s) 19, 181
Bsu15I ATCGAT 1 cut(s) 570
BsuTUI ATCGAT 1 cut(s) 570
BtgI CCRYGG 1 cut(s) 1778
BtgZI GCGATG 1 cut(s) 1500
BtsCI GGATG 5 cut(s) 862, 1308, 1506, 1598, 1661
BtsI GCAGTG 3 cut(s) 351, 924, 1311
BtsIMutI CAGTG 5 cut(s) 222, 329, 351, 924, 1311
CciI TCATGA 1 cut(s) 835
CfoI GCGC 1 cut(s) 1622
Cfr13I GGNCC 1 cut(s) 1660
ClaI ATCGAT 1 cut(s) 570
CseI GACGC 1 cut(s) 893
CsiI ACCWGGT 1 cut(s) 1381
Csp6I GTAC 5 cut(s) 508, 583, 1202, 1379, 1389
CspCI CAANNNNNGTGG 2 cut(s) 1236, 1271
CviQI GTAC 5 cut(s) 508, 583, 1202, 1379, 1389
DdeI CTNAG 3 cut(s) 129, 605, 627
DpnI GATC 6 cut(s) 21, 183, 407, 588, 834, 1793
DpnII GATC 6 cut(s) 19, 181, 405, 586, 832, 1791
Eam1104I CTCTTC 3 cut(s) 1071, 1158, 1483
EarI CTCTTC 3 cut(s) 1071, 1158, 1483
Eco130I CCWWGG 2 cut(s) 519, 1778
Eco32I GATATC 1 cut(s) 1051
Eco47I GGWCC 1 cut(s) 1660
Eco57I CTGAAG 3 cut(s) 343, 666, 1548
EcoO109I RGGNCCY 1 cut(s) 1660
EcoRI GAATTC 1 cut(s) 536
EcoRII CCWGG 3 cut(s) 703, 912, 1381
EcoRV GATATC 1 cut(s) 1051
EcoT14I CCWWGG 2 cut(s) 519, 1778
EcoT22I ATGCAT 1 cut(s) 1328
ErhI CCWWGG 2 cut(s) 519, 1778
FaqI GGGAC 3 cut(s) 495, 1646, 1676
FauNDI CATATG 2 cut(s) 1098, 1788
FbaI TGATCA 2 cut(s) 405, 832
FblI GTMKAC 1 cut(s) 718
FokI GGATG 5 cut(s) 849, 1315, 1493, 1585, 1668
FspBI CTAG 5 cut(s) 80, 201, 590, 672, 797
GlaI GCGC 1 cut(s) 1621
HapII CCGG 1 cut(s) 1694
HgaI GACGC 1 cut(s) 893
HhaI GCGC 1 cut(s) 1622
Hin6I GCGC 1 cut(s) 1620
HinP1I GCGC 1 cut(s) 1620
HinfI GANTC 5 cut(s) 168, 187, 601, 720, 1572
HpaII CCGG 1 cut(s) 1694
HphI GGTGA 3 cut(s) 455, 682, 1544
Hpy166II GTNNAC 4 cut(s) 35, 317, 719, 1260
Hpy188I TCNGA 5 cut(s) 186, 685, 972, 1396, 1735
Hpy188III TCNNGA 9 cut(s) 80, 172, 409, 513, 823, 836, 870, 938, 1143
Hpy8I GTNNAC 4 cut(s) 35, 317, 719, 1260
Hpy99I CGWCG 1 cut(s) 887
HpyCH4III ACNGT 5 cut(s) 226, 486, 879, 1554, 1640
HpyCH4IV ACGT 1 cut(s) 710
HpyF10VI GCNNNNNNNGC 8 cut(s) 41, 245, 374, 638, 1112, 1346, 1619, 1706
HpyF3I CTNAG 3 cut(s) 129, 605, 627
HpySE526I ACGT 1 cut(s) 710
HspAI GCGC 1 cut(s) 1620
KflI GGGWCCC 1 cut(s) 1660
Ksp22I TGATCA 2 cut(s) 405, 832
Kzo9I GATC 6 cut(s) 19, 181, 405, 586, 832, 1791
LguI GCTCTTC 1 cut(s) 1158
LmnI GCTCC 2 cut(s) 245, 1145
LweI GCATC 4 cut(s) 79, 1006, 1586, 1607
MabI ACCWGGT 1 cut(s) 1381
MaeI CTAG 5 cut(s) 80, 201, 590, 672, 797
MaeII ACGT 1 cut(s) 710
MaeIII GTNAC 6 cut(s) 611, 1057, 1281, 1520, 1548, 1640
MalI GATC 6 cut(s) 21, 183, 407, 588, 834, 1793
MboI GATC 6 cut(s) 19, 181, 405, 586, 832, 1791
MboII GAAGA 8 cut(s) 302, 424, 610, 1006, 1088, 1145, 1470, 1737
MfeI CAATTG 1 cut(s) 148
MflI RGATCY 2 cut(s) 19, 181
MhlI GDGCHC 2 cut(s) 37, 924
MlyI GAGTC 3 cut(s) 196, 714, 1566
MmeI TCCRAC 1 cut(s) 510
Mph1103I ATGCAT 1 cut(s) 1328
MroXI GAANNNNTTC 2 cut(s) 679, 789
MseI TTAA 3 cut(s) 108, 927, 944
MslI CAYNNNNRTG 3 cut(s) 840, 1002, 1220
MspA1I CMGCKG 4 cut(s) 371, 377, 1352, 1367
MspI CCGG 1 cut(s) 1694
MspR9I CCNGG 4 cut(s) 705, 914, 1383, 1694
MunI CAATTG 1 cut(s) 148
MvaI CCWGG 3 cut(s) 705, 914, 1383
MvnI CGCG 1 cut(s) 1519
MwoI GCNNNNNNNGC 8 cut(s) 41, 245, 374, 638, 1112, 1346, 1619, 1706
NciI CCSGG 1 cut(s) 1694
NcoI CCATGG 1 cut(s) 1778
NdeI CATATG 2 cut(s) 1098, 1788
NdeII GATC 6 cut(s) 19, 181, 405, 586, 832, 1791
NlaIV GGNNCC 5 cut(s) 183, 517, 1039, 1661, 1662
NmuCI GTSAC 3 cut(s) 611, 1057, 1640
NsiI ATGCAT 1 cut(s) 1328
NspI RCATGY 3 cut(s) 117, 257, 315
PagI TCATGA 1 cut(s) 835
PciI ACATGT 3 cut(s) 113, 253, 311
PciSI GCTCTTC 1 cut(s) 1158
PdmI GAANNNNTTC 2 cut(s) 679, 789
PfeI GAWTC 2 cut(s) 168, 601
PflFI GACNNNGTC 1 cut(s) 224
PfoI TCCNGGA 1 cut(s) 703
PleI GAGTC 3 cut(s) 195, 714, 1566
PpsI GAGTC 3 cut(s) 195, 714, 1566
PpuMI RGGWCCY 1 cut(s) 1660
PscI ACATGT 3 cut(s) 113, 253, 311
Psp5II RGGWCCY 1 cut(s) 1660
Psp6I CCWGG 3 cut(s) 703, 912, 1381
PspGI CCWGG 3 cut(s) 703, 912, 1381
PspN4I GGNNCC 5 cut(s) 183, 517, 1039, 1661, 1662
PspPI GGNCC 1 cut(s) 1660
PspPPI RGGWCCY 1 cut(s) 1660
PstI CTGCAG 2 cut(s) 376, 1719
PsuI RGATCY 2 cut(s) 19, 181
PsyI GACNNNGTC 1 cut(s) 224
PvuII CAGCTG 4 cut(s) 371, 377, 1352, 1367
RsaI GTAC 5 cut(s) 509, 584, 1203, 1380, 1390
RsaNI GTAC 5 cut(s) 508, 583, 1202, 1379, 1389
RseI CAYNNNNRTG 3 cut(s) 840, 1002, 1220
SapI GCTCTTC 1 cut(s) 1158
SaqAI TTAA 3 cut(s) 108, 927, 944
Sau3AI GATC 6 cut(s) 19, 181, 405, 586, 832, 1791
Sau96I GGNCC 1 cut(s) 1660
SchI GAGTC 3 cut(s) 196, 714, 1566
ScrFI CCNGG 4 cut(s) 705, 914, 1383, 1694
SduI GDGCHC 2 cut(s) 37, 924
SexAI ACCWGGT 1 cut(s) 1381
SfaNI GCATC 4 cut(s) 79, 1006, 1586, 1607
SfcI CTRYAG 3 cut(s) 372, 1593, 1715
SinI GGWCC 1 cut(s) 1660
SmiMI CAYNNNNRTG 3 cut(s) 840, 1002, 1220
SmlI CTYRAG 1 cut(s) 823
SmoI CTYRAG 1 cut(s) 823
SpeI ACTAGT 1 cut(s) 796
SsiI CCGC 2 cut(s) 544, 1337
SspMI CTAG 5 cut(s) 80, 201, 590, 672, 797
StyD4I CCNGG 4 cut(s) 703, 912, 1381, 1692
StyI CCWWGG 2 cut(s) 519, 1778
TaaI ACNGT 5 cut(s) 226, 486, 879, 1554, 1640
TaiI ACGT 1 cut(s) 713
TaqI TCGA 7 cut(s) 59, 279, 436, 540, 570, 882, 1794
TatI WGTACW 2 cut(s) 507, 1201
TauI GCSGC 1 cut(s) 1340
TfiI GAWTC 2 cut(s) 168, 601
Tru1I TTAA 3 cut(s) 108, 927, 944
Tru9I TTAA 3 cut(s) 108, 927, 944
TscAI CASTG 5 cut(s) 229, 336, 358, 924, 1318
TseFI GTSAC 3 cut(s) 611, 1057, 1640
Tsp45I GTSAC 3 cut(s) 611, 1057, 1640
TspDTI ATGAA 9 cut(s) 356, 798, 1089, 1238, 1287, 1311, 1319, 1495, 1576
TspRI CASTG 5 cut(s) 229, 336, 358, 924, 1318
Tth111I GACNNNGTC 1 cut(s) 224
VneI GTGCAC 1 cut(s) 33
VpaK11BI GGWCC 1 cut(s) 1660
XapI RAATTY 2 cut(s) 536, 748
XbaI TCTAGA 1 cut(s) 79
XceI RCATGY 3 cut(s) 117, 257, 315
XcmI CCANNNNNNNNNTGG 1 cut(s) 526
XmiI GTMKAC 1 cut(s) 718
XmnI GAANNNNTTC 2 cut(s) 679, 789
XspI CTAG 5 cut(s) 80, 201, 590, 672, 797
Zsp2I ATGCAT 1 cut(s) 1328
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.