Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004542.1

Orthogroup ID

OG0000172

Physical Location & Seq

Genomic Coordinates Reverse (-)

62341 .. 64864

Gene Structure 2524 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004542.1_g000018.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1284 bp

atgctcacctataccacaacttttactccccctctctcttgctctgctagggttagggttttgagtcctcaagttgtgcggcgtctcattctcatggctgctattgcctccatgactgctattgcctccatgactgctagacttgcgactaaactgtcgctcaaggaaggggaagaacttgtggatttggagaaccttagggttccgaggaaagagtttttggccctcaatttctacctggtgggtcgactgaatacttgtcgggcgctggtgttcgattcgttccggagtgccgtgcgatcgatgtggcgtctgtctgggacggtggaggtccaaccaagaggtgatcgttttctctttacattcacccatgaacgtgacgttgctcgtgtgaagaagggtggtccctggggttttcagcgagccatgcttctcctgaatgactatgatgggttttcggagatctcagaggtgaagctagattttgtttggatctggactgtgctgcaaggaattcctccaggtatcctgactgagactatggtcaggttagtgggagggacgattggagaagtgctggaggtagatcgtgagctagctttagagctagaagcagaggcggggccgattgttcctgccctagtctttagggtgaatgttcagcctacaatttcgcctgctttgctgtctgcttttaggatccctaatatgctgaagaaacgatcggtgcagatccggtcgctgccagagctggtgccgacgtcggggactaaagggacctcttctcaacatcttgtggggatgcgtcgcccaagagaggaggagactcaggaagaggggatgcgtgacaaacacggattggatctcgtcccggttgatttgcatccagaaaatctcggtttggagttctcttccgagggactggtgaatgtgacagtgacctcagctcctaaggtctataagaagaaaggatggcccggtggcaagagaaacactcccaaaagctcgctggcgatgtcggtttgtagattctctgagtcactactggagtcagcatctactgcaggtggtctaacaggtttgcatgctacgcatgcaagtttggcgtctttttcccggtctgtcgaggccctgtcgtttaactactgcaaagtaaagctttccggcgaccacgttgatgctcaagcttggatagtggaactgtggattgtggtgttgttctttctcattggcctcagtggtcctcgggctggttgcgaatcggagctctgggttttgaactga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005829 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006979 GO:0008150 GO:0008152 GO:0009505 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0016020 GO:0016491 GO:0016614 GO:0016899 GO:0030054 GO:0030312 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048046 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0055114 GO:0071944 GO:0098542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BBE FAD_binding_4

Protein Analysis

427

Amino Acids

47.18

Weight (kDa)

8.91

Isoelectric Point (pI)

36.88

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000172)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G59650 AT3G59650
fragaria_vesca	FvH4_1g19981 FvH4_1g22221 FvH4_2g13530 FvH4_2g13791 FvH4_2g14332 FvH4_2g14911 FvH4_2g16332 FvH4_3g10980 FvH4_3g11141 FvH4_3g14171 FvH4_3g26311 FvH4_3g28254 FvH4_3g29741 FvH4_4g05261 FvH4_4g12002 FvH4_4g13371 FvH4_4g15541 FvH4_4g18531 FvH4_5g02661 FvH4_5g02662 FvH4_5g16791 FvH4_5g29700 FvH4_5g35881 FvH4_5g37061 FvH4_6g01571 FvH4_6g12761 FvH4_6g14961 FvH4_6g20381 FvH4_6g22001 FvH4_6g23673 FvH4_6g23960 FvH4_6g28051 FvH4_6g31094 FvH4_6g36541 FvH4_7g00911 FvH4_7g06200 FvH4_7g06200 FvH4_7g09551
malus_domestica	MD08G1230600.v1.1
prunus_persica	Prupe.1G206900_v2.0.a1 Prupe.1G206900_v2.0.a1 Prupe.1G206900_v2.0.a1
pyrus_communis	pycom08g20050 pycom15g37590
rosa_chinensis	RchiOBHm_Chr1g0333831 RchiOBHm_Chr1g0344871 RchiOBHm_Chr3g0473241 RchiOBHm_Chr5g0018871 RchiOBHm_Chr6g0265791
rosa_laevigata	RLG00000005720 RLG00000012718 RLG00000027174 RLG00000029225 RLG00000029527
rosa_multiflora	Rmu_co8002714.1_g000001 Rmu_co8072270.1_g000001 Rmu_co8095594.1_g000001 Rmu_co8308871.1_g000001 Rmu_co8398699.1_g000001 Rmu_co8404287.1_g000001 Rmu_sc0000035.1_g000010 Rmu_sc0000133.1_g000007 Rmu_sc0000253.1_g000023 Rmu_sc0000308.1_g000010 Rmu_sc0000309.1_g000030 Rmu_sc0000515.1_g000015 Rmu_sc0000865.1_g000001 Rmu_sc0000889.1_g000005 Rmu_sc0001262.1_g000011 Rmu_sc0001518.1_g000013 Rmu_sc0001533.1_g000006 Rmu_sc0001547.1_g000007 Rmu_sc0001826.1_g000013 Rmu_sc0002060.1_g000017 Rmu_sc0002129.1_g000005 Rmu_sc0002449.1_g000016 Rmu_sc0002460.1_g000036 Rmu_sc0002475.1_g000014 Rmu_sc0002553.1_g000017 Rmu_sc0002759.1_g000033 Rmu_sc0002918.1_g000009 Rmu_sc0002955.1_g000020 Rmu_sc0003094.1_g000010 Rmu_sc0003669.1_g000009 Rmu_sc0004109.1_g000008 Rmu_sc0004350.1_g000007 Rmu_sc0004542.1_g000018 Rmu_sc0004967.1_g000005 Rmu_sc0005026.1_g000005 Rmu_sc0005369.1_g000013 Rmu_sc0005400.1_g000025 Rmu_sc0005420.1_g000006 Rmu_sc0005467.1_g000013 Rmu_sc0005497.1_g000003 Rmu_sc0005607.1_g000023 Rmu_sc0005949.1_g000008 Rmu_sc0005970.1_g000002 Rmu_sc0006452.1_g000001 Rmu_sc0006720.1_g000008 Rmu_sc0006867.1_g000004 Rmu_sc0007177.1_g000006 Rmu_sc0007199.1_g000011 Rmu_sc0007783.1_g000004 Rmu_sc0007885.1_g000006 Rmu_sc0008619.1_g000001 Rmu_sc0008709.1_g000004 Rmu_sc0008709.1_g000005 Rmu_sc0009185.1_g000029 Rmu_sc0010244.1_g000010 Rmu_sc0011610.1_g000005 Rmu_sc0011680.1_g000013 Rmu_sc0012075.1_g000003 Rmu_sc0012278.1_g000001 Rmu_sc0012628.1_g000001 Rmu_sc0018485.1_g000006 Rmu_sc0019960.1_g000001 Rmu_sc0020177.1_g000002 Rmu_sc0020656.1_g000001 Rmu_sc0021333.1_g000003 Rmu_sc0023170.1_g000002 Rmu_sc0023989.1_g000005 Rmu_sc0025259.1_g000001 Rmu_sc0025350.1_g000013 Rmu_sc0029678.1_g000002 Rmu_sc0035939.1_g000001 Rmu_sc0039260.1_g000001 Rmu_sc0039886.1_g000001 Rmu_ssc0000323.1_g000030 Rmu_ssc0000333.1_g000005 Rmu_ssc0000471.1_g000017 Rmu_ssc0000480.1_g000025
rosa_roxburghii	Rroxscaffold_1G00006060 Rroxscaffold_1G00048570 Rroxscaffold_1G00057650 Rroxscaffold_1G00072720 Rroxscaffold_4G00281190 Rroxscaffold_4G00317160 Rroxscaffold_6G00411570
rosa_rugosa	Rorug01G0004800 Rorug01G0112100 Rorug01G0206100 Rorug02G0324000 Rorug05G0305600 Rorug05G0326800 Rorug06G0018900 Rorug06G0167000 Rorug07G0031200 Rorug07G0071900
rosa_samantha	Rh1AG134700 Rh1BG103000 Rh1CG007300 Rh1CG128100 Rh1DG140100 Rh2DG579500 Rh3DG199000 Rh4BG252500 Rh5AG374900 Rh5BG146800 Rh5BG151500 Rh5DG399700
rosa_wichuraiana	Rw0G001820 Rw1G011230 Rw1G011240 Rw1G027290 Rw2G011670 Rw2G039270 Rw6G018440 Rw6G023120 Rw7G025180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1055
AasI	GACNNNNNNGTC	1 cut(s)	154
AatII	GACGTC	1 cut(s)	764
Acc36I	ACCTGC	1 cut(s)	1055
AccB1I	GGYRCC	1 cut(s)	754
AccI	GTMKAC	1 cut(s)	247
AccIII	TCCGGA	1 cut(s)	285
AciI	CCGC	2 cut(s)	79, 620
AclWI	GGATC	5 cut(s)	500, 694, 707, 727, 870
AcsI	RAATTY	1 cut(s)	513
AcuI	CTGAAG	1 cut(s)	734
AcyI	GRCGYC	4 cut(s)	82, 310, 761, 1106
AfiI	CCNNNNNNNGG	3 cut(s)	764, 817, 1250
AgsI	TTSAA	1 cut(s)	1279
AjnI	CCWGG	3 cut(s)	237, 407, 520
AjuI	GAANNNNNNNTTGG	2 cut(s)	203, 235
Alw21I	GWGCWC	1 cut(s)	1269
Alw26I	GTCTC	3 cut(s)	89, 530, 818
AlwI	GGATC	5 cut(s)	500, 694, 707, 727, 870
Ama87I	CYCGRG	1 cut(s)	1245
Aor13HI	TCCGGA	1 cut(s)	285
AoxI	GGCC	5 cut(s)	222, 623, 974, 1128, 1231
ApeKI	GCWGC	3 cut(s)	98, 505, 742
ApoI	RAATTY	1 cut(s)	513
AspLEI	GCGC	1 cut(s)	268
AspS9I	GGNCC	8 cut(s)	223, 331, 404, 623, 777, 975, 1129, 1241
AsuC2I	CCSGG	3 cut(s)	872, 978, 1117
AsuHPI	GGTGA	5 cut(s)	356, 358, 484, 664, 937
AsuNHI	GCTAGC	1 cut(s)	595
AvaI	CYCGRG	1 cut(s)	1245
AvaII	GGWCC	4 cut(s)	331, 404, 777, 1241
AxyI	CCTNAGG	2 cut(s)	197, 951
BamHI	GGATCC	1 cut(s)	699
BanI	GGYRCC	1 cut(s)	754
BanII	GRGCYC	1 cut(s)	1269
BauI	CACGAG	1 cut(s)	387
Bbv12I	GWGCWC	1 cut(s)	1269
BbvCI	CCTCAGC	1 cut(s)	943
BbvI	GCAGC	3 cut(s)	85, 492, 729
BccI	CCATC	2 cut(s)	443, 966
BceAI	ACGGC	1 cut(s)	278
BciT130I	CCWGG	3 cut(s)	239, 409, 522
BciVI	GTATCC	1 cut(s)	536
BcnI	CCSGG	3 cut(s)	872, 978, 1117
BcoDI	GTCTC	3 cut(s)	89, 530, 818
BfaI	CTAG	6 cut(s)	48, 138, 479, 596, 608, 641
BfmI	CTRYAG	1 cut(s)	1062
BfoI	RGCGCY	1 cut(s)	269
BfuAI	ACCTGC	1 cut(s)	1055
BfuI	GTATCC	1 cut(s)	536
BglII	AGATCT	1 cut(s)	462
BisI	GCNGC	4 cut(s)	80, 99, 506, 743
BlsI	GCNGC	4 cut(s)	81, 100, 507, 744
Bme1390I	CCNGG	6 cut(s)	239, 409, 522, 872, 978, 1117
Bme18I	GGWCC	4 cut(s)	331, 404, 777, 1241
BmeT110I	CYCGRG	1 cut(s)	1245
BmgT120I	GGNCC	8 cut(s)	223, 331, 404, 623, 777, 975, 1129, 1241
BmiI	GGNNCC	6 cut(s)	204, 406, 624, 701, 756, 778
BmrFI	CCNGG	6 cut(s)	239, 409, 522, 872, 978, 1117
BmsI	GCATC	5 cut(s)	792, 831, 892, 1064, 1168
BmtI	GCTAGC	1 cut(s)	599
BoxI	GACNNNNGTC	1 cut(s)	542
BplI	GAGNNNNNCTC	2 cut(s)	979, 1011
BpmI	CTGGAG	3 cut(s)	504, 599, 1067
Bpu10I	CCTNAGC	1 cut(s)	943
BpuEI	CTTGAG	3 cut(s)	54, 146, 1167
BpuMI	CCSGG	3 cut(s)	872, 978, 1117
Bsa29I	ATCGAT	1 cut(s)	302
BsaBI	GATNNNNATC	1 cut(s)	882
BsaHI	GRCGYC	4 cut(s)	82, 310, 761, 1106
BsaJI	CCNNGG	5 cut(s)	206, 407, 408, 915, 1244
BsaWI	WCCGGW	2 cut(s)	285, 735
BsaXI	ACNNNNNCTCC	4 cut(s)	10, 40, 931, 961
Bsc4I	CCNNNNNNNGG	3 cut(s)	764, 817, 1250
Bse1I	ACTGG	2 cut(s)	927, 1050
Bse21I	CCTNAGG	2 cut(s)	197, 951
Bse8I	GATNNNNATC	1 cut(s)	882
BseAI	TCCGGA	1 cut(s)	285
BseBI	CCWGG	3 cut(s)	239, 409, 522
BseCI	ATCGAT	1 cut(s)	302
BseDI	CCNNGG	5 cut(s)	206, 407, 408, 915, 1244
BseGI	GGATG	4 cut(s)	807, 846, 883, 977
BseJI	GATNNNNATC	1 cut(s)	882
BseLI	CCNNNNNNNGG	3 cut(s)	764, 817, 1250
BseMII	CTCAG	6 cut(s)	480, 525, 842, 957, 1026, 1249
BseNI	ACTGG	2 cut(s)	927, 1050
BseRI	GAGGAG	2 cut(s)	833, 836
BseXI	GCAGC	3 cut(s)	85, 492, 729
BsgI	GTGCAG	1 cut(s)	749
Bsh1285I	CGRYCG	3 cut(s)	302, 725, 740
BshFI	GGCC	5 cut(s)	224, 625, 976, 1130, 1233
BshNI	GGYRCC	1 cut(s)	754
BshVI	ATCGAT	1 cut(s)	302
BsiEI	CGRYCG	3 cut(s)	302, 725, 740
BsiHKAI	GWGCWC	1 cut(s)	1269
BsiHKCI	CYCGRG	1 cut(s)	1245
BsiSI	CCGG	6 cut(s)	286, 736, 872, 978, 1117, 1164
BslFI	GGGAC	7 cut(s)	334, 390, 574, 781, 790, 854, 933
BslI	CCNNNNNNNGG	3 cut(s)	764, 817, 1250
BsmAI	GTCTC	3 cut(s)	89, 530, 818
BsmBI	CGTCTC	1 cut(s)	89
BsmFI	GGGAC	7 cut(s)	334, 390, 574, 781, 790, 854, 933
BsnI	GGCC	5 cut(s)	224, 625, 976, 1130, 1233
BsoBI	CYCGRG	1 cut(s)	1245
Bsp1286I	GDGCHC	1 cut(s)	1269
Bsp13I	TCCGGA	1 cut(s)	285
Bsp143I	GATC	9 cut(s)	299, 346, 462, 492, 586, 699, 722, 732, 862
BspACI	CCGC	2 cut(s)	79, 620
BspANI	GGCC	5 cut(s)	224, 625, 976, 1130, 1233
BspCNI	CTCAG	6 cut(s)	479, 526, 841, 956, 1027, 1248
BspDI	ATCGAT	1 cut(s)	302
BspEI	TCCGGA	1 cut(s)	285
BspLI	GGNNCC	6 cut(s)	204, 406, 624, 701, 756, 778
BspMAI	CTGCAG	1 cut(s)	1066
BspMI	ACCTGC	1 cut(s)	1055
BspOI	GCTAGC	1 cut(s)	599
BspPI	GGATC	5 cut(s)	500, 694, 707, 727, 870
BspT107I	GGYRCC	1 cut(s)	754
BsrI	ACTGG	2 cut(s)	927, 1050
BssECI	CCNNGG	5 cut(s)	206, 407, 408, 915, 1244
BssMI	GATC	9 cut(s)	299, 346, 462, 492, 586, 699, 722, 732, 862
BssNI	GRCGYC	4 cut(s)	82, 310, 761, 1106
BssSI	CACGAG	1 cut(s)	387
Bst2BI	CACGAG	1 cut(s)	387
Bst2UI	CCWGG	3 cut(s)	239, 409, 522
Bst4CI	ACNGT	5 cut(s)	156, 325, 502, 937, 1203
Bst6I	CTCTTC	3 cut(s)	787, 828, 916
BstACI	GRCGYC	4 cut(s)	82, 310, 761, 1106
BstAPI	GCANNNNNTGC	1 cut(s)	1061
BstC8I	GCNNGC	7 cut(s)	423, 597, 678, 1007, 1011, 1086, 1095
BstDEI	CTNAG	8 cut(s)	197, 466, 534, 828, 943, 951, 1035, 1235
BstF5I	GGATG	4 cut(s)	807, 846, 883, 977
BstH2I	RGCGCY	1 cut(s)	269
BstHHI	GCGC	1 cut(s)	268
BstKTI	GATC	9 cut(s)	302, 349, 465, 495, 589, 702, 725, 735, 865
BstMAI	GTCTC	3 cut(s)	89, 530, 818
BstMBI	GATC	9 cut(s)	299, 346, 462, 492, 586, 699, 722, 732, 862
BstMCI	CGRYCG	3 cut(s)	302, 725, 740
BstMWI	GCNNNNNNNGC	9 cut(s)	104, 143, 427, 682, 748, 1061, 1090, 1094, 1103
BstNI	CCWGG	3 cut(s)	239, 409, 522
BstNSI	RCATGY	2 cut(s)	1088, 1097
BstPAI	GACNNNNGTC	1 cut(s)	542
BstSCI	CCNGG	6 cut(s)	237, 407, 520, 870, 976, 1115
BstSFI	CTRYAG	1 cut(s)	1062
BstV1I	GCAGC	3 cut(s)	85, 492, 729
BstX2I	RGATCY	5 cut(s)	462, 492, 699, 732, 862
BstYI	RGATCY	5 cut(s)	462, 492, 699, 732, 862
Bsu15I	ATCGAT	1 cut(s)	302
Bsu36I	CCTNAGG	2 cut(s)	197, 951
BsuI	GTATCC	1 cut(s)	536
BsuRI	GGCC	5 cut(s)	224, 625, 976, 1130, 1233
BsuTUI	ATCGAT	1 cut(s)	302
BtgZI	GCGATG	1 cut(s)	1028
BtsCI	GGATG	4 cut(s)	807, 846, 883, 977
BtsIMutI	CAGTG	2 cut(s)	942, 1243
BveI	ACCTGC	1 cut(s)	1055
Cac8I	GCNNGC	7 cut(s)	423, 597, 678, 1007, 1011, 1086, 1095
CfoI	GCGC	1 cut(s)	268
Cfr13I	GGNCC	8 cut(s)	223, 331, 404, 623, 777, 975, 1129, 1241
ClaI	ATCGAT	1 cut(s)	302
CseI	GACGC	4 cut(s)	71, 299, 794, 1095
CsiI	ACCWGGT	1 cut(s)	237
CviAII	CATG	7 cut(s)	94, 112, 130, 371, 427, 1085, 1094
DdeI	CTNAG	8 cut(s)	197, 466, 534, 828, 943, 951, 1035, 1235
DpnI	GATC	9 cut(s)	301, 348, 464, 494, 588, 701, 724, 734, 864
DpnII	GATC	9 cut(s)	299, 346, 462, 492, 586, 699, 722, 732, 862
DrdI	GACNNNNNNGTC	1 cut(s)	154
DseDI	GACNNNNNNGTC	1 cut(s)	154
Eam1104I	CTCTTC	3 cut(s)	787, 828, 916
EarI	CTCTTC	3 cut(s)	787, 828, 916
Ecl136II	GAGCTC	1 cut(s)	1267
Eco24I	GRGCYC	1 cut(s)	1269
Eco47I	GGWCC	4 cut(s)	331, 404, 777, 1241
Eco53kI	GAGCTC	1 cut(s)	1267
Eco57I	CTGAAG	1 cut(s)	734
Eco81I	CCTNAGG	2 cut(s)	197, 951
Eco88I	CYCGRG	1 cut(s)	1245
EcoICRI	GAGCTC	1 cut(s)	1267
EcoO109I	RGGNCCY	2 cut(s)	777, 1129
EcoRI	GAATTC	1 cut(s)	513
EcoRII	CCWGG	3 cut(s)	237, 407, 520
EcoT38I	GRGCYC	1 cut(s)	1269
Esp3I	CGTCTC	1 cut(s)	89
FaeI	CATG	7 cut(s)	97, 115, 133, 374, 430, 1088, 1097
FalI	AAGNNNNNCTT	2 cut(s)	1143, 1175
FaqI	GGGAC	7 cut(s)	334, 390, 574, 781, 790, 854, 933
FatI	CATG	7 cut(s)	93, 111, 129, 370, 426, 1084, 1093
FauI	CCCGC	1 cut(s)	613
FblI	GTMKAC	1 cut(s)	247
Fnu4HI	GCNGC	4 cut(s)	80, 99, 506, 743
FokI	GGATG	4 cut(s)	814, 853, 870, 984
FriOI	GRGCYC	1 cut(s)	1269
Fsp4HI	GCNGC	4 cut(s)	80, 99, 506, 743
FspBI	CTAG	6 cut(s)	48, 138, 479, 596, 608, 641
GlaI	GCGC	1 cut(s)	267
GluI	GCNGC	4 cut(s)	80, 99, 506, 743
GsuI	CTGGAG	3 cut(s)	504, 599, 1067
HaeII	RGCGCY	1 cut(s)	269
HaeIII	GGCC	5 cut(s)	224, 625, 976, 1130, 1233
HapII	CCGG	6 cut(s)	286, 736, 872, 978, 1117, 1164
HgaI	GACGC	4 cut(s)	71, 299, 794, 1095
HhaI	GCGC	1 cut(s)	268
Hin1I	GRCGYC	4 cut(s)	82, 310, 761, 1106
Hin1II	CATG	7 cut(s)	97, 115, 133, 374, 430, 1088, 1097
Hin6I	GCGC	1 cut(s)	266
HinP1I	GCGC	1 cut(s)	266
HincII	GTYRAC	1 cut(s)	248
HindII	GTYRAC	1 cut(s)	248
HindIII	AAGCTT	2 cut(s)	1157, 1185
HinfI	GANTC	7 cut(s)	64, 278, 826, 1029, 1037, 1049, 1259
HpaII	CCGG	6 cut(s)	286, 736, 872, 978, 1117, 1164
HphI	GGTGA	5 cut(s)	356, 358, 484, 664, 937
Hpy166II	GTNNAC	1 cut(s)	248
Hpy188I	TCNGA	6 cut(s)	207, 460, 469, 916, 1036, 1264
Hpy188III	TCNNGA	7 cut(s)	286, 436, 496, 529, 590, 830, 887
Hpy8I	GTNNAC	1 cut(s)	248
Hpy99I	CGWCG	3 cut(s)	763, 766, 810
HpyAV	CCTTC	2 cut(s)	161, 391
HpyCH4III	ACNGT	5 cut(s)	156, 325, 502, 937, 1203
HpyCH4IV	ACGT	4 cut(s)	376, 381, 761, 1173
HpyCH4V	TGCA	7 cut(s)	508, 730, 883, 1064, 1084, 1097, 1149
HpyF10VI	GCNNNNNNNGC	9 cut(s)	104, 143, 427, 682, 748, 1061, 1090, 1094, 1103
HpyF3I	CTNAG	8 cut(s)	197, 466, 534, 828, 943, 951, 1035, 1235
HpySE526I	ACGT	4 cut(s)	376, 381, 761, 1173
Hsp92I	GRCGYC	4 cut(s)	82, 310, 761, 1106
Hsp92II	CATG	7 cut(s)	97, 115, 133, 374, 430, 1088, 1097
HspAI	GCGC	1 cut(s)	266
Kpn2I	TCCGGA	1 cut(s)	285
Kzo9I	GATC	9 cut(s)	299, 346, 462, 492, 586, 699, 722, 732, 862
LmnI	GCTCC	2 cut(s)	952, 1264
Lsp1109I	GCAGC	3 cut(s)	85, 492, 729
LweI	GCATC	5 cut(s)	792, 831, 892, 1064, 1168
MabI	ACCWGGT	1 cut(s)	237
MaeI	CTAG	6 cut(s)	48, 138, 479, 596, 608, 641
MaeII	ACGT	4 cut(s)	376, 381, 761, 1173
MaeIII	GTNAC	5 cut(s)	377, 845, 931, 937, 1038
MalI	GATC	9 cut(s)	301, 348, 464, 494, 588, 701, 724, 734, 864
MboI	GATC	9 cut(s)	299, 346, 462, 492, 586, 699, 722, 732, 862
MboII	GAAGA	7 cut(s)	185, 406, 727, 774, 845, 903, 976
MflI	RGATCY	5 cut(s)	462, 492, 699, 732, 862
MhlI	GDGCHC	1 cut(s)	1269
MluCI	AATT	3 cut(s)	229, 513, 669
MlyI	GAGTC	4 cut(s)	73, 820, 1046, 1058
MmeI	TCCRAC	1 cut(s)	358
MroI	TCCGGA	1 cut(s)	285
MseI	TTAA	1 cut(s)	1140
MslI	CAYNNNNRTG	3 cut(s)	92, 375, 1176
MspI	CCGG	6 cut(s)	286, 736, 872, 978, 1117, 1164
MspR9I	CCNGG	6 cut(s)	239, 409, 522, 872, 978, 1117
MvaI	CCWGG	3 cut(s)	239, 409, 522
MwoI	GCNNNNNNNGC	9 cut(s)	104, 143, 427, 682, 748, 1061, 1090, 1094, 1103
NciI	CCSGG	3 cut(s)	872, 978, 1117
NdeII	GATC	9 cut(s)	299, 346, 462, 492, 586, 699, 722, 732, 862
NheI	GCTAGC	1 cut(s)	595
NlaIII	CATG	7 cut(s)	97, 115, 133, 374, 430, 1088, 1097
NlaIV	GGNNCC	6 cut(s)	204, 406, 624, 701, 756, 778
NmuCI	GTSAC	5 cut(s)	377, 845, 931, 937, 1038
NspI	RCATGY	2 cut(s)	1088, 1097
PaeI	GCATGC	2 cut(s)	1088, 1097
PaqCI	CACCTGC	1 cut(s)	1055
PasI	CCCWGGG	1 cut(s)	408
PfeI	GAWTC	3 cut(s)	278, 1029, 1259
PkrI	GCNGC	4 cut(s)	81, 100, 507, 744
Ple19I	CGATCG	2 cut(s)	302, 725
PleI	GAGTC	4 cut(s)	72, 820, 1045, 1057
PpsI	GAGTC	4 cut(s)	72, 820, 1045, 1057
PpuMI	RGGWCCY	1 cut(s)	777
PshAI	GACNNNNGTC	1 cut(s)	542
Psp124BI	GAGCTC	1 cut(s)	1269
Psp5II	RGGWCCY	1 cut(s)	777
Psp6I	CCWGG	3 cut(s)	237, 407, 520
PspGI	CCWGG	3 cut(s)	237, 407, 520
PspN4I	GGNNCC	6 cut(s)	204, 406, 624, 701, 756, 778
PspPI	GGNCC	8 cut(s)	223, 331, 404, 623, 777, 975, 1129, 1241
PspPPI	RGGWCCY	1 cut(s)	777
PstI	CTGCAG	1 cut(s)	1066
PsuI	RGATCY	5 cut(s)	462, 492, 699, 732, 862
PvuI	CGATCG	2 cut(s)	302, 725
RseI	CAYNNNNRTG	3 cut(s)	92, 375, 1176
SacI	GAGCTC	1 cut(s)	1269
SalI	GTCGAC	1 cut(s)	246
SaqAI	TTAA	1 cut(s)	1140
SatI	GCNGC	4 cut(s)	80, 99, 506, 743
Sau3AI	GATC	9 cut(s)	299, 346, 462, 492, 586, 699, 722, 732, 862
Sau96I	GGNCC	8 cut(s)	223, 331, 404, 623, 777, 975, 1129, 1241
SchI	GAGTC	4 cut(s)	73, 820, 1046, 1058
ScrFI	CCNGG	6 cut(s)	239, 409, 522, 872, 978, 1117
SduI	GDGCHC	1 cut(s)	1269
SexAI	ACCWGGT	1 cut(s)	237
SfaNI	GCATC	5 cut(s)	792, 831, 892, 1064, 1168
SfcI	CTRYAG	1 cut(s)	1062
SinI	GGWCC	4 cut(s)	331, 404, 777, 1241
SmiMI	CAYNNNNRTG	3 cut(s)	92, 375, 1176
SmlI	CTYRAG	3 cut(s)	69, 161, 1182
SmoI	CTYRAG	3 cut(s)	69, 161, 1182
SphI	GCATGC	2 cut(s)	1088, 1097
Sse9I	AATT	3 cut(s)	229, 513, 669
SsiI	CCGC	2 cut(s)	79, 620
SspMI	CTAG	6 cut(s)	48, 138, 479, 596, 608, 641
SstI	GAGCTC	1 cut(s)	1269
StyD4I	CCNGG	6 cut(s)	237, 407, 520, 870, 976, 1115
TaaI	ACNGT	5 cut(s)	156, 325, 502, 937, 1203
TaiI	ACGT	4 cut(s)	379, 384, 764, 1176
TaqI	TCGA	4 cut(s)	247, 276, 302, 1125
TasI	AATT	3 cut(s)	229, 513, 669
TauI	GCSGC	1 cut(s)	82
TfiI	GAWTC	3 cut(s)	278, 1029, 1259
Tru1I	TTAA	1 cut(s)	1140
Tru9I	TTAA	1 cut(s)	1140
TscAI	CASTG	2 cut(s)	942, 1243
TseFI	GTSAC	5 cut(s)	377, 845, 931, 937, 1038
TseI	GCWGC	3 cut(s)	98, 505, 742
Tsp45I	GTSAC	5 cut(s)	377, 845, 931, 937, 1038
TspDTI	ATGAA	1 cut(s)	387
TspGWI	ACGGA	1 cut(s)	870
TspRI	CASTG	2 cut(s)	942, 1243
VpaK11BI	GGWCC	4 cut(s)	331, 404, 777, 1241
XapI	RAATTY	1 cut(s)	513
XceI	RCATGY	2 cut(s)	1088, 1097
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1006
XmiI	GTMKAC	1 cut(s)	247
XspI	CTAG	6 cut(s)	48, 138, 479, 596, 608, 641
ZraI	GACGTC	1 cut(s)	762

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.